Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATACGACTACTACGGAGACAACGGAGGTACCGATTTTTCACCGCAAGTGACCGAGTTATAAAGAATTTTGTTTTTTCTTCCGTGAAAGCGAAAACCCGGACAACTCCCACAAAGGGCTTTTCTCCACTGCGAAGCATCGGAACAACGCTCAACGCCGACGGAGGAGAGAGAAAAAGATAGTCAAACAACTTGTATTGCAGTTCCTCAATTAAATTAGGGTTTCTCATTCCTCACCATTTAGGATTTTTGAAATCCAATCCAAATTAAATCTCGCGGAACCATAAGAAAAGCGGGGAAGTTTTCCACAATTCACCAAAAATGGTAAAGACAACGAAAGGAGGCAAAGTTATGAATCCTACTGATGCTTATCGCAAAGAACTTCGCAAAAAGGAATTGAAAAGGGTTTGATTTTCTCCTCTTTTCCCCTTCAATTTCCATCTATTATCATTTTTGTTTAAAATTCTAGGGTTTGCATTTTGAACTTTCAATTCAATACGTTCTTTTGCGATTTTTTGTGGGTTGAAGGAATTGGTGTATTGCTTATTGTCTCCGTACCTCCAGTTGTTAAATTTAGGTGTTATTTGAACAAATTGGAGAAATGTGTGTTACATTGTTCGTGCTTGAATTAAAGCTAAGTGGTATCACAGATGTAAAACTTTAATTGTTTCAAGATTCAGGAATTTTTTTTTGTTGAAATGTTGATTTGGTTATGGCGTCTGCCACTGAGGAGGAGACTATTGACTTGCAAATTTGAGGGATTTGGATAAGCTGATCACGTGTGTATAAAATTTGAGGGTCGCAAATGTAAGAATTACACTCAGAGTAGAAGAGTGACTATCTTTATTTACCGTTTTTTCACTTGGTTTTTCATTGTTTAACTTTTACATCAGATCATCAAACTCAAACAACTTTGGGAAAATAAGATATGAGAAAATTGATTTTGTTTTTGTAGTAAATACGTAAGGTATGGAATTTTGGAGTTCAAATAATGGCTTATTTTGACTCAAATGTCGATGTATAGAAGTGTGTAGGGTTCTGGAATCTGGACAGAACAAATGTTTTCATCTTTGTCTATTCTTCAGTAGTGGGAGAGAAAGAAATAAATGCGTTTTCTTATGTCTTATGTAGCTAATGGAGGGGCTTTCTGTAGGTGGATCTGACAATAGCTCTGTTAGATATTGTCATCATTCGAACTACAATTAGTTTTAAGTTGTATTAGGTTGAGAATGTTGTCGTGATCATTTAATTGTAGGTTGAGAAATCATATTACGTGATATATTTGACGTTTGTCATTGTACCACTCTCTACATTGAATGCATTTGTTTAGAGGAAACTTCTTGTTTCTGTATCTTATATGTGTGTTCTTTGACTTGGACAGAACAAGAAAGAGAGAAAAAAGGTTAGGGAGGTGGGTATTTTGAAGAAGGATCCTGATCAGATCAAAGATCAGATTCAAAAATTGGAGACAATGAGTAAGTTGACTCTGCTGAAAATTGTTTGTTTCTCTACATGTTGAATACATTTAGATGGCTGTCATACTGTTGACGTGATATGATTTCTCTTTACTTAAATACATCATTGATTAGTTTGAAATCGTACTTATAACATGTAACAATAGGTGAGAGTTACATTTGTGGTTGTCCCCTTCTTACTTGAGGAAGGAAGATAAGTAGTATAATGTTCTCTCAGGAACCAAGTTATTTTTTATTACCAGAAAAACAATTCAGTCTACAACACAAGAAAAGCTAGAACTCCAAATTTCACAAATTCTTAGAAAGGGATGTGTTTGGGAAAATACCTTCATGTGAGCCCAAAAAGAAGCTTAATACACCACTTGCTCCCATAAAATTTCAAGTGAGGAGTTCTGACCTTGGAAAATCCTCTCATTCCACTCCAACCAATTTATCCACCAAATAGCCAAAAAGAATCCTACCAAACATCACATCAATGAACACCAACAATAGCAAGTAACCTCTGTCAAAGTGTCAATGTAATAATGCGATGGTTAGGGGATGCTAATTGACTAATTGAGCGAGCCAAGATTGAAGCAAGATCGAGCTTAGGGTAGCTCAAGTTGGCTCACATTTGCACAGTAACTCGAGGCGAGCCTCAAGCTTTTTGGAGCTCAAAATTTCTAAGCTTAACTTACCATAAAACTCAACTTGAGTTCAAATTATATCGTCTTCGCCATGTTATAACTATGTTTGTGCTGATTTTTGAGTTTCTCACCAAAATTGTTTTAAATTTTACTTTTTAATTTAAGGTAGATGTTAAACATAATATTTCGAGCACGTTTACAAGCTTTCGAATTGAGCTTTGTTGTGTTAGCTCATGAAAATTTTGAGTGGGGCTCGAATAGTTCACAGCTAGGCTCGCGGACACCCCTAGCCACAGTACAATGCAAGTACAAATGATTAAGTACAAACGATTCCCTGTCTTCTCTCTAGCAAGACATAGCACACATGAGGAGAAAGGTCCTTCTAAGGTCTTTCAGCTTGTAGAGTATCAAAAGTACCGAGCTTTCAAAACCAGAGATACAGTCAGCTTTCACCTACTCCCTCTGTTTCAGTTTAATGGTTACAATTTCCATAAATGGGTGTTTCGAATGTATTGTTACACTTTGATTTATTCTATCTTGGACATATGACCCACATTATTTTATTACTTCTTTATCCACTTTACATTACTAATTCCTTACAACATCAACTACTTACGTTACTTTATTATTTTTTCTTGTAACAATCCACTTTCTTTAATTTACTTTCCAATAATTATCTTGATTTTTGTGAAAAGCAAAGTGTAACCATTAAACCAGAACGGAGAGAATACCCTTTGCACTTCTTATTGTTCTGATGTTGCTTGCAAGTTGTCCAGTCCATTGCTGTCTCAAGTGGAGATGCTTTCGGAAAGAGTGTTGTGTCAAAGTTAAAGAGTAAAAGCAGGTTTTAGGCATTTGGTGGTTGGTTAGGGAGTCCATCATGATGATGGTGATAAGAGTCATTAGACTAAAATAATTAAAGAGTTTTTTAATGTACAGATTGTTTGGTTTACTAGGGTACCCCCATTTTTCTAAATATGTGATTTCAAACTAATTGATGATGCATGCATTTTCACTTCTTATTACTCTGCACTTGCCACTGTAGTTGAGAATTTATTGTTGTGGATATTGTTTGCAATCTTTTATCTGACTAGGCGACTATTCAATTTTGTTCTTTCTTTCCCCCCCAAAAAAATTGCACAGAAGCTGAAGGTGCACTTGATAAGGCAAGAAAGCACAAGAAAAGGCAGCTTGAGGATACTTTAAACCTTGTTATGAAGAAGCGAAAGGTAAGCATATATATGTTTGTCCTTATCATGAGCTATGGCACTTGACTTTGGTGCATGTATGCCTCAAGGTAAATCTTATCTATCTTGGATATTCCTAGAGTTTTCTTTTCTAGGTTGTAACCCCCTTTGTGTCCCTTTTTGTTTTGACCTGAAATGGTTGTCAATTGTCATGCTTAACTAGCCTAATCTAATTCATTATCAGTCACGCATTTATTCCATCAGTTACTCACTGCAACTAAGGGAGTAACAAGTGTAGATATGAATGGTTGGAGACATTGTTGATTCAACGGGGGTTGTATTTATAACAAATGTGTTTCTTCAGATGCGGGGGCTTTTTAGCCATGGCAGTATGACTGTCCCAGTGGGATGGAAGAATTGGAAATGTTAAAAATCTGAAGTGCCATCTTAGCATCCGACTAGCCTTACTTGACCTGAGCACTTGGAAATGGAATGAGGAGCTTTAATAGGTAGTCTACAAAGCAGTTTCATTTTGTGTACCTATGTGAAGTTTTAAATGTGTGAATTTAGTCTTATAGATGAATTGAACCTCAACACTTGCGCTTTTGGTCAGTAGTAGTAGTTTCGAAGTTTGTGTCCTACATGCGAATGATAGATATTGTTTCTTTTTCTCCAGTTTTAAATAGCAAGCGTAGATGCGACTTGTGTTGTGCATCATCTTTAGCCACCTATTGTAGGTAGGTCAATCTGGTACACATGAGCTACACCTAAGGACACACCTCATTTTTCAGATGCGGGGGCATTTAGTTGGGGTTTTCAGGAAAGGGAAAGATTTGTATGATTCCCTTTGTTGTTTGTTTGGTATTTTTTGTCATTCCCTTTACCCTCTTTTCTATTTCACTTACCACCAAACTCCTCTAAAATGAATACTTACCTTCCAAGACTTTTGCATTCCCTTTCCACCCAGAACCACTGACCCCACCAGCCACGATCCCAAACGACTCAGCCAGAACCACCGACCACCACCCAGAACCACCTCCGGCTGAACCAATGACTTCCTCTTCTTTCCTTCACTGCAAACCCGTCGCTTCGCCGGCCAATCTCCGCCGTCAATTCAATCCCCCACCCCTCACCTGCGGCCTACATCACCGCACATAATTTCTAGGATCCCCACCTTCAGCATACCTAAATGTCGATGTTTCTCAGCAAAAGAAAAATAGCGAAGTCTAAGAAGATAATGGAGGAAGACGCAAAGGTGATAGTGGGGATCTACGCTAGAGCTCCGTTGATGCTGTCCCATGGAAAAGGCCGGAAATTGTGAAGGGCGAGAGTTTTTGGATTTTACTTCTGGGATTGTTGTTAATGCCCTTGGTCATGGTGGTCATGTTACCCAAACAACATCTTTCATCAAAGGGTTTTGCTTTTCTTTCTCCCTCTTTCCCTTGTTGATTTCATTCCCTTTACCCCGTGCGAACCAAACGCCAGAGGAAAAATGAGTCTTAACCATAATTTAATGGATTTCTCTTTGTTACATCAGCATGAATGGCTGACAAGGTTGTACATTGGAAAATTTGATTTGGGACTTGGCCTTGGTCCAAATCCAAACCTAAGTCCAAATCCAAACCGAATTTGAACTGAGCCTCCAATGGATCCGAACCAAAATCTGAACTCAATAGTTTGGATCAAAACCAAGTTCTGGTTCAATTATGGGAGGCCGTACTCCATCGCTAGGAGTGGGCTCGCCCAACATATAGGCTTTAAATTCATTGTGGTGCAATTTCGTCAGAAGTTGCAGGTTGGGTTTTATGCTATCGCGGCTTTGATTTGCTACCTATTACCAAGAAGTATAAAGGAAAAAAGAAATGAAAAAGGCGATGTCAAAATAACCGACATACGATAATTTACACTTTATTTTTGACAGATTAGAAACAATAGATCCGGGTAATAGGGATACATGTATTTTTATCCTCCTACACCCGAATACTTGTATAGTACTGAGTATTTTGTATAATTCGATAGAACGTCACGCCTTTTCTTCCTACCTTTCCCCTGTCATCTTGTGGCGCTTTTTCCTTTTGTTAGGGCTGTTTGTTTCATGCAAGAGAAAGGGAAAGAAATCAGAATAAGGGATATAAAGGAAAAGTTACCAAAAAAACCTTCCAAATTCCCTCATGTGTTAACGAGGGGAAATAAATGTAAATTATTTTTGGTTTGTACCAAAGAAAGAAATGCAACCGTCAATAAGACAGCCACCCTTCTAACTGCCTACTCAGACTATCTGTCCTTCACCAGTGCACCATGCCATTACTCCTTATAGCTGCCCCCTGTGACTGTACTGCATCTTGCTGCTGCCTGAATACGCCACTATAGACAGGTTCTAGTGGTCAAGTTTGAAGTTCGGAACATAAAACCTCCAGATCTGGAGTTCTGTGGTCGAATATAATTATGTAAAGACACGATGCTTTAATGATCTATTGAGCATTCTTCACTCTCTCTCCTTCTAGATCTCTCTTCACTCCAATTTTTGGTTTTTAAGGGGATTTGTCAGGGTGGTTGTGAGGACCAACCGACCAAGCGAATCAGTCTTGGTGGTAGGGTTTTGGGTAGAGGCTCATATTTGGTGGCTGTTGGTGGGGTTTGTTGGGTTTAGTTATGTGATGAGGTAGGATAGGGATTTGAGGTTTTCAGATCTTGTTGGGCTATTGGAGGAATGGTGGCGGGATGTTGGTGTCAGGTGTTATTTGGGCTGTTGGTGGCTTGGGTGCTGAAGGGATGCTGGTGAATTTTATAGTCTTGGTCAAACTTCATCATGGTGTAGATGAGTTTGGGGCAATTTAAATCCAAGAGGGAGACGGGACTCATAGTAGAGGAATTAGGGGTGAATTGAAAGTGGAAAATGGGGAACGGTGTGTGAAAAACAGCAATCAAACACTGTAAAAGGGAAATAGGGGCTTTAATTCTCTTTCTCTTTTCTGAAACCCGTGTACCAAACATCCCCTTAATTCTTTACATGCCGTATATTTGCTAGGAGTCTTGCAACATCCCTGTTTGATGTGTAAATGCACCTTTGTTTTGAATTAATCAATACACTAAATCTAATATATGCCAAATTGTTCATAAGTTTGAACCAATGTGAGTTGTTACAATGATGTTTGATTTTGTTTGACAGGAGTATGAAGAAAAAATGAAGGAAAAGGGTGAGGAACCAGTGATGTTCAGGTATTTTACCTTTCATTTTGTTTTTAATAATAGTTGTGTATTAAATTTTTTTTCTCTGAACAAGGTGAATCTGCTGCAGCCATTTGGGACCTGTACAAAGACGGACCTCAGCTGAAGAGGAGGAGAGAGCGAAGCACCCACAACCTGAAGTAAATTATTCTTGA AAATACGACTACTACGGAGACAACGGAGGTACCGATTTTTCACCGCAAGTGACCGAGTTATAAAGAATTTTGTTTTTTCTTCCGTGAAAGCGAAAACCCGGACAACTCCCACAAAGGGCTTTTCTCCACTGCGAAGCATCGGAACAACGCTCAACGCCGACGGAGGAGAGAGAAAAAGATAGTCAAACAACTTGTATTGCAGTTCCTCAATTAAATTAGGGTTTCTCATTCCTCACCATTTAGGATTTTTGAAATCCAATCCAAATTAAATCTCGCGGAACCATAAGAAAAGCGGGGAAGTTTTCCACAATTCACCAAAAATGGTAAAGACAACGAAAGGAGGCAAAGTTATGAATCCTACTGATGCTTATCGCAAAGAACTTCGCAAAAAGGAATTGAAAAGGAACAAGAAAGAGAGAAAAAAGGTTAGGGAGGTGGGTATTTTGAAGAAGGATCCTGATCAGATCAAAGATCAGATTCAAAAATTGGAGACAATGAAAGCTGAAGGTGCACTTGATAAGGCAAGAAAGCACAAGAAAAGGCAGCTTGAGGATACTTTAAACCTTGTTATGAAGAAGCGAAAGGAGTATGAAGAAAAAATGAAGGAAAAGGGTGAGGAACCAGTGATGTTCAGCCATTTGGGACCTGTACAAAGACGGACCTCAGCTGAAGAGGAGGAGAGAGCGAAGCACCCACAACCTGAAGTAAATTATTCTTGA ATGGTAAAGACAACGAAAGGAGGCAAAGTTATGAATCCTACTGATGCTTATCGCAAAGAACTTCGCAAAAAGGAATTGAAAAGGAACAAGAAAGAGAGAAAAAAGGTTAGGGAGGTGGGTATTTTGAAGAAGGATCCTGATCAGATCAAAGATCAGATTCAAAAATTGGAGACAATGAAAGCTGAAGGTGCACTTGATAAGGCAAGAAAGCACAAGAAAAGGCAGCTTGAGGATACTTTAAACCTTGTTATGAAGAAGCGAAAGGAGTATGAAGAAAAAATGAAGGAAAAGGGTGAGGAACCAGTGATGTTCAGCCATTTGGGACCTGTACAAAGACGGACCTCAGCTGAAGAGGAGGAGAGAGCGAAGCACCCACAACCTGAAGTAAATTATTCTTGA MVKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDQIKDQIQKLETMKAEGALDKARKHKKRQLEDTLNLVMKKRKEYEEKMKEKGEEPVMFSHLGPVQRRTSAEEEERAKHPQPEVNYS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21099.1 vs. NCBI nr
Match: gi|731349874|ref|XP_010686221.1| (PREDICTED: vegetative cell wall protein gp1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 230.3 bits (586), Expect = 1.900e-57 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of Spo21099.1 vs. NCBI nr
Match: gi|697131007|ref|XP_009619557.1| (PREDICTED: basic proline-rich protein [Nicotiana tomentosiformis]) HSP 1 Score: 213.8 bits (543), Expect = 1.800e-52 Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo21099.1 vs. NCBI nr
Match: gi|698542747|ref|XP_009766509.1| (PREDICTED: WW domain-binding protein 11-like [Nicotiana sylvestris]) HSP 1 Score: 213.8 bits (543), Expect = 1.800e-52 Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo21099.1 vs. NCBI nr
Match: gi|747051293|ref|XP_011071736.1| (PREDICTED: formin-like protein 5 [Sesamum indicum]) HSP 1 Score: 212.6 bits (540), Expect = 4.100e-52 Identity = 113/128 (88.28%), Postives = 122/128 (95.31%), Query Frame = 1
BLAST of Spo21099.1 vs. NCBI nr
Match: gi|976921698|gb|KVI06371.1| (WW domain binding protein 11 [Cynara cardunculus var. scolymus]) HSP 1 Score: 211.5 bits (537), Expect = 9.200e-52 Identity = 113/127 (88.98%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BSC5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g181010 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.300e-57 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Match: A0A022R852_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a004249mg PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 6.400e-52 Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 1
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Match: A0A103YC46_CYNCS (WW domain binding protein 11 OS=Cynara cardunculus var. scolymus GN=Ccrd_015277 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 6.400e-52 Identity = 113/127 (88.98%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Match: B9IF51_POPTR (EARLY FLOWERING 5 family protein OS=Populus trichocarpa GN=POPTR_0015s10190g PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.200e-51 Identity = 111/127 (87.40%), Postives = 124/127 (97.64%), Query Frame = 1
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Match: A0A067K4N9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11562 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 4.100e-51 Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo21099.1 vs. ExPASy Swiss-Prot
Match: WBP11_HUMAN (WW domain-binding protein 11 OS=Homo sapiens GN=WBP11 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.500e-6 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1
BLAST of Spo21099.1 vs. ExPASy Swiss-Prot
Match: WBP11_MOUSE (WW domain-binding protein 11 OS=Mus musculus GN=Wbp11 PE=1 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 4.500e-6 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1
BLAST of Spo21099.1 vs. ExPASy Swiss-Prot
Match: WBP11_RAT (WW domain-binding protein 11 OS=Rattus norvegicus GN=Wbp11 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.500e-6 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1
BLAST of Spo21099.1 vs. ExPASy Swiss-Prot
Match: WBP11_DANRE (WW domain-binding protein 11 OS=Danio rerio GN=wbp11 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 9.900e-6 Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 1
BLAST of Spo21099.1 vs. TAIR (Arabidopsis)
Match: AT5G62640.3 (proline-rich family protein) HSP 1 Score: 138.7 bits (348), Expect = 2.700e-33 Identity = 92/157 (58.60%), Postives = 108/157 (68.79%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21099.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21099.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21099.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo21099.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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