Spo21129 (gene)

Overview
NameSpo21129
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionActin depolymerizing factor 5
Locationchr4 : 108242826 .. 108244666 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAAGATGATGTGGAAGTCTTAGCTCATACTAGAGCTCTACGTAACGAGTGTAATTATTAGCAACTTGAGTGGCAAATAACAAAACCTATTTCTATATAAAGCCAACCCAGTGCCACATCACTACCATCCTACTCAACAAACTTCACAATTACGGAGTAAAAAATACAGAGCAGAAGCAACTCAAGCAAGCAACACTAGTGCAAAAATGGCTATGGCATTCAAGATGGTAACACAATTTTCAATCTTAATTGCAAATTTGATTTATCTTAGTATTTCAAATTACTATTTTTCCCAACTACTAATGGTGATATTGATGATATTCTCTGAAAATTGAATGATAAAAACAGGCGACGTTGGGGATGAAGGTGACAGAGGAATGCAAGAATTCATTCATGGAGATGAAGTGGAAAAAGGTTCACCGCTACATCGTTTTTAAGATCGATGAGAAGTCCGGCGGATTCACCGTCGATAAGGTCGGCGCCTCCGGTGAGGGTTACGACGATCTCACCGCCTCGCTTCCCGATGACGATTGCCGCTACGCCGTCTTCGATTTTGATTTTGTCACCGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATCGCTTGGTATTGACGCCACTATCTCTTTTTCTTTTTCTTTTTCCTTTTTATTATTTATCTTTCTTTTTATTTGGAATCACTTTGCTGATTTAGTTTTGACCTTAACTTTATGATCTAACTTCCGTTCAAAACTTAAGATTTTTTAAGTTTTAGCGGGTAATCAATGTGAAGTAATATACCTATTACCCGTACCGTATTAGGCATGGCACAACCGCGAATTGTATCTTGTTCGAGACTCACCATCTGCTTGTGTTTAAGAGGATAGATTTGCGTAATTGAGCTGATTGATATGTGTCAGTTCAGTAGGATATGATAACTATGATAAAGATTTTGGACCAAAACGAGTACATAATTAAAACATGAAAATAAATTTACTATTTTGAATTTTCATCGTCTCAAAATTATATGGACAACAATTAAGAGATACTATGAATTCATCATAAGTGCCAACAACATTTTAATTAGGAGTTTATGTTTTTTATTAAAGAGTAACAAAAATTAAAAGAGTTTACCTTATTAACGGATTAACTTTATTCTAGAAGTTAGGTTGAGACCTCCAAGTCTTACTGATGAAGCCATTACCGACACTACCGAAAGTTAGTTCTAAAGCTTACAAATTATGATGATGAAACGCTTTGTTAAAATTGCATTACACTTTTTAGTTTTTACCTTCCTTAAAGTTGTGTTTGTTTGCGTACGAAATTACGATTATGGTCCTAAAGTTTGTGGTTAATTACGGTTTCAGGGCACCATCAGCGTCAAGAATTAGAGCAAAAATGTTGTATGCAACATCAAAGGATGGAATAAGGAGAGCATTAGATGGAATACATTACGAAGTGCAGGCAACCGAACCTAGTGAGATGGGGTTCGATATCATCAAGGACCGCGCTAATTAGCTCTAATCTTGATTTTAACTGCCCCTCTAAATCTCAAATTAATCCCAAAATGTTCTAATTTATGTGTTTTTTTTTCTTTTCATAGTTTCAATTGATGACCTTAGATTTAGATCAAAGGTAGTATTAAGATCGGATTCGGAGGAGTTTTAATTAACATGTTTGGTAGTGTTGTTGCTCCCCTTCCTTTGATCTTTTCTTCTTGTCTTCTATTTTGTATGTTATTGTTTGTACTCGAAATGATGCTAATCTTGTAATGCTAATCCTCTAATTTGGTAAAATAATTGAGGTGGGCACTTGTACTAATTAAATCAAGTAATAAAATAGTAGTATTATCAATTATC

mRNA sequence

TAAAAAGATGATGTGGAAGTCTTAGCTCATACTAGAGCTCTACGTAACGAGTGTAATTATTAGCAACTTGAGTGGCAAATAACAAAACCTATTTCTATATAAAGCCAACCCAGTGCCACATCACTACCATCCTACTCAACAAACTTCACAATTACGGAGTAAAAAATACAGAGCAGAAGCAACTCAAGCAAGCAACACTAGTGCAAAAATGGCTATGGCATTCAAGATGGCGACGTTGGGGATGAAGGTGACAGAGGAATGCAAGAATTCATTCATGGAGATGAAGTGGAAAAAGGTTCACCGCTACATCGTTTTTAAGATCGATGAGAAGTCCGGCGGATTCACCGTCGATAAGGTCGGCGCCTCCGGTGAGGGTTACGACGATCTCACCGCCTCGCTTCCCGATGACGATTGCCGCTACGCCGTCTTCGATTTTGATTTTGTCACCGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATCGCTTGGGCACCATCAGCGTCAAGAATTAGAGCAAAAATGTTGTATGCAACATCAAAGGATGGAATAAGGAGAGCATTAGATGGAATACATTACGAAGTGCAGGCAACCGAACCTAGTGAGATGGGGTTCGATATCATCAAGGACCGCGCTAATTAGCTCTAATCTTGATTTTAACTGCCCCTCTAAATCTCAAATTAATCCCAAAATGTTCTAATTTATGTGTTTTTTTTTCTTTTCATAGTTTCAATTGATGACCTTAGATTTAGATCAAAGGTAGTATTAAGATCGGATTCGGAGGAGTTTTAATTAACATGTTTGGTAGTGTTGTTGCTCCCCTTCCTTTGATCTTTTCTTCTTGTCTTCTATTTTGTATGTTATTGTTTGTACTCGAAATGATGCTAATCTTGTAATGCTAATCCTCTAATTTGGTAAAATAATTGAGGTGGGCACTTGTACTAATTAAATCAAGTAATAAAATAGTAGTATTATCAATTATC

Coding sequence (CDS)

ATGGCTATGGCATTCAAGATGGCGACGTTGGGGATGAAGGTGACAGAGGAATGCAAGAATTCATTCATGGAGATGAAGTGGAAAAAGGTTCACCGCTACATCGTTTTTAAGATCGATGAGAAGTCCGGCGGATTCACCGTCGATAAGGTCGGCGCCTCCGGTGAGGGTTACGACGATCTCACCGCCTCGCTTCCCGATGACGATTGCCGCTACGCCGTCTTCGATTTTGATTTTGTCACCGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATCGCTTGGGCACCATCAGCGTCAAGAATTAGAGCAAAAATGTTGTATGCAACATCAAAGGATGGAATAAGGAGAGCATTAGATGGAATACATTACGAAGTGCAGGCAACCGAACCTAGTGAGATGGGGTTCGATATCATCAAGGACCGCGCTAATTAG

Protein sequence

MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQATEPSEMGFDIIKDRAN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21129.1Spo21129.1mRNA


Homology
[Close]
BLAST of Spo21129.1 vs. NCBI nr
Match: gi|902175313|gb|KNA08561.1| (hypothetical protein SOVF_161590 [Spinacia oleracea])

HSP 1 Score: 292.7 bits (748), Expect = 3.400e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL
Sbjct: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
           TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG
Sbjct: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRAN 144
           IHYEVQATEPSEMGFDIIKDRAN
Sbjct: 121 IHYEVQATEPSEMGFDIIKDRAN 143
[Close]
BLAST of Spo21129.1 vs. NCBI nr
Match: gi|731357765|ref|XP_010690383.1| (PREDICTED: actin-depolymerizing factor 5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 287.3 bits (734), Expect = 1.400e-74
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMATLGM+VTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGA+GEGYDDL
Sbjct: 1   MAMAFKMATLGMRVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGAAGEGYDDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRAN 144
           IHYEVQAT+PSEMGFDIIKDRAN
Sbjct: 121 IHYEVQATDPSEMGFDIIKDRAN 143
[Close]
BLAST of Spo21129.1 vs. NCBI nr
Match: gi|976918947|gb|KVI04098.1| (Actin-binding, cofilin/tropomyosin type [Cynara cardunculus var. scolymus])

HSP 1 Score: 261.9 bits (668), Expect = 6.400e-67
Identity = 128/142 (90.14%), Postives = 133/142 (93.66%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM V +ECKNSFMEMKWKKVHRYIVFKIDEKS   TVDKVG +GEGY DL
Sbjct: 54  MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGDAGEGYSDL 113

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
           TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSAS+IRAKMLYATSKDG+RR LDG
Sbjct: 114 TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASKIRAKMLYATSKDGLRRVLDG 173

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYEVQATEPSEMGFDII+DRA
Sbjct: 174 IHYEVQATEPSEMGFDIIQDRA 195
[Close]
BLAST of Spo21129.1 vs. NCBI nr
Match: gi|567859938|ref|XP_006422623.1| (hypothetical protein CICLE_v10029455mg [Citrus clementina])

HSP 1 Score: 258.1 bits (658), Expect = 9.300e-66
Identity = 124/142 (87.32%), Postives = 132/142 (92.96%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM V +ECKNSFMEMKWKKVHRYIVFKIDEKS   TVDKVG +GEGY+DL
Sbjct: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAP+ASRIRAKMLYATSKDG+RR LDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYEVQAT+P+EMGFD+I DRA
Sbjct: 121 IHYEVQATDPTEMGFDVIMDRA 142
[Close]
BLAST of Spo21129.1 vs. NCBI nr
Match: gi|747090421|ref|XP_011092897.1| (PREDICTED: actin-depolymerizing factor 5-like [Sesamum indicum])

HSP 1 Score: 257.7 bits (657), Expect = 1.200e-65
Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMA  GM+VTEECKNSFMEMKWKKVHRYIVFKIDE+S   TVDKVGA+ EGYDDL
Sbjct: 1   MAMAFKMAMTGMRVTEECKNSFMEMKWKKVHRYIVFKIDERSKKLTVDKVGAAAEGYDDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            A+LP DDCRYAVFDFDFVTVDNCRKSKIFFIAWAP+ASRIRAKMLYATSKDG+RRALDG
Sbjct: 61  AAALPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRALDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDR 142
           IHYE+QAT+P+EMGFD+IKDR
Sbjct: 121 IHYELQATDPTEMGFDVIKDR 141
[Close]
BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPT4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161590 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.400e-76
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL
Sbjct: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
           TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG
Sbjct: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRAN 144
           IHYEVQATEPSEMGFDIIKDRAN
Sbjct: 121 IHYEVQATEPSEMGFDIIKDRAN 143
[Close]
BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BN78_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214230 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 9.900e-75
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMATLGM+VTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGA+GEGYDDL
Sbjct: 1   MAMAFKMATLGMRVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGAAGEGYDDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRAN 144
           IHYEVQAT+PSEMGFDIIKDRAN
Sbjct: 121 IHYEVQATDPSEMGFDIIKDRAN 143
[Close]
BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Match: A0A118K2B0_CYNCS (Actin-binding, cofilin/tropomyosin type OS=Cynara cardunculus var. scolymus GN=Ccrd_017606 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.500e-67
Identity = 128/142 (90.14%), Postives = 133/142 (93.66%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM V +ECKNSFMEMKWKKVHRYIVFKIDEKS   TVDKVG +GEGY DL
Sbjct: 54  MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGDAGEGYSDL 113

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
           TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSAS+IRAKMLYATSKDG+RR LDG
Sbjct: 114 TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASKIRAKMLYATSKDGLRRVLDG 173

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYEVQATEPSEMGFDII+DRA
Sbjct: 174 IHYEVQATEPSEMGFDIIQDRA 195
[Close]
BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Match: A0A067FPD7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031424mg PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.500e-66
Identity = 124/142 (87.32%), Postives = 132/142 (92.96%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM V +ECKNSFMEMKWKKVHRYIVFKIDEKS   TVDKVG +GEGY+DL
Sbjct: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAP+ASRIRAKMLYATSKDG+RR LDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYEVQAT+P+EMGFD+I DRA
Sbjct: 121 IHYEVQATDPTEMGFDVIMDRA 142
[Close]
BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Match: V4RNE8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029455mg PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.500e-66
Identity = 124/142 (87.32%), Postives = 132/142 (92.96%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM V +ECKNSFMEMKWKKVHRYIVFKIDEKS   TVDKVG +GEGY+DL
Sbjct: 1   MAMAFKMATTGMWVADECKNSFMEMKWKKVHRYIVFKIDEKSKLVTVDKVGGAGEGYEDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            ASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAP+ASRIRAKMLYATSKDG+RR LDG
Sbjct: 61  AASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPTASRIRAKMLYATSKDGLRRVLDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYEVQAT+P+EMGFD+I DRA
Sbjct: 121 IHYEVQATDPTEMGFDVIMDRA 142
[Close]
BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.300e-62
Identity = 114/142 (80.28%), Postives = 129/142 (90.85%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM+VT+EC +SFM+MKWKKVHRYIVFKI+EKS   TVDKVG +GE Y DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+P AS+IRAK+LYATSKDG+RR L+G
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYE+QAT+P+EMGFDII+DRA
Sbjct: 121 IHYELQATDPTEMGFDIIQDRA 142
[Close]
BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 3.800e-59
Identity = 106/142 (74.65%), Postives = 125/142 (88.03%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMA+KMAT GM V EEC+  FMEMKWKKVHR++V+KIDE+S    VDKVG  GEGY++L
Sbjct: 1   MAMAYKMATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEEL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
            A+LP DDCRYAVFDFDFVTVDNC+KSKIFFIAW+P+ASRIRAK+LYATSK G+RR LDG
Sbjct: 61  VAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           +HYEVQAT+ SEMG+D+I+ RA
Sbjct: 121 VHYEVQATDSSEMGYDVIRGRA 142
[Close]
BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=2)

HSP 1 Score: 228.4 bits (581), Expect = 4.900e-59
Identity = 105/140 (75.00%), Postives = 123/140 (87.86%), Query Frame = 1 

		  

Query: 3   MAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTA 62
           MA K AT GM +T++CK SFMEMKWKKVHRY+V+K++EKS   TVDKVGA+GE YDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIH 122
           SLP+DDCRYAVFDFD+VTVDNCR SKIFFI W+P ASRIR KM+YATSK G+RR LDG+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATEPSEMGFDIIKDRA 143
           YE+QAT+P+EMGFD I+DRA
Sbjct: 121 YELQATDPTEMGFDKIQDRA 140
[Close]
BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.300e-46
Identity = 82/136 (60.29%), Postives = 111/136 (81.62%), Query Frame = 1 

		  

Query: 8   ATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDD 67
           A+ GM V +  KN+F+E+K KKVHRY++FKIDEK     V+K G   E +D+  A+LP++
Sbjct: 8   ASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPEN 67

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFFIAW+P +SRIRAKMLYATSK+  RR LDG+HYE+QA
Sbjct: 68  DCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQA 127

Query: 128 TEPSEMGFDIIKDRAN 144
           T+P+EM  +++++RA+
Sbjct: 128 TDPTEMDLEVLRERAH 143
[Close]
BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.400e-45
Identity = 80/136 (58.82%), Postives = 110/136 (80.88%), Query Frame = 1 

		  

Query: 8   ATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDD 67
           A+ G+ V  ECK +F+E++ KK HRY++FKID+K     V+K G+S E +DD   SLP+ 
Sbjct: 10  ASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES 69

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQA 127
           DCRYA++DFDFVT +NC+KSKIFF+AW+PS SRIRAKMLYATSK+  RR LDG+HYE+QA
Sbjct: 70  DCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQA 129

Query: 128 TEPSEMGFDIIKDRAN 144
           T+PSE+  +++++RA+
Sbjct: 130 TDPSELDIELLRERAH 145
[Close]
BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Match: AT2G16700.1 (actin depolymerizing factor 5)

HSP 1 Score: 240.4 bits (612), Expect = 7.100e-64
Identity = 114/142 (80.28%), Postives = 129/142 (90.85%), Query Frame = 1 

		  

Query: 1   MAMAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDL 60
           MAMAFKMAT GM+VT+EC +SFM+MKWKKVHRYIVFKI+EKS   TVDKVG +GE Y DL
Sbjct: 1   MAMAFKMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDL 60

Query: 61  TASLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDG 120
             SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAW+P AS+IRAK+LYATSKDG+RR L+G
Sbjct: 61  EDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEG 120

Query: 121 IHYEVQATEPSEMGFDIIKDRA 143
           IHYE+QAT+P+EMGFDII+DRA
Sbjct: 121 IHYELQATDPTEMGFDIIQDRA 142
[Close]
BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Match: AT4G34970.1 (actin depolymerizing factor 9)

HSP 1 Score: 228.4 bits (581), Expect = 2.800e-60
Identity = 105/140 (75.00%), Postives = 123/140 (87.86%), Query Frame = 1 

		  

Query: 3   MAFKMATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTA 62
           MA K AT GM +T++CK SFMEMKWKKVHRY+V+K++EKS   TVDKVGA+GE YDDL A
Sbjct: 1   MALKTATSGMWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAA 60

Query: 63  SLPDDDCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIH 122
           SLP+DDCRYAVFDFD+VTVDNCR SKIFFI W+P ASRIR KM+YATSK G+RR LDG+H
Sbjct: 61  SLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVH 120

Query: 123 YEVQATEPSEMGFDIIKDRA 143
           YE+QAT+P+EMGFD I+DRA
Sbjct: 121 YELQATDPTEMGFDKIQDRA 140
[Close]
BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 178.7 bits (452), Expect = 2.500e-45
Identity = 81/133 (60.90%), Postives = 105/133 (78.95%), Query Frame = 1 

		  

Query: 11  GMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDDDCR 70
           GM V +ECK  F+E+K K+ +R+IVFKIDEK+    ++K+G   E YDD T+S+PDD+CR
Sbjct: 7   GMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECR 66

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQATEP 130
           YAV+DFDF T DNC+KSKIFFIAW+P  SR+R+KMLYA+SKD  +R ++GI  E+QAT+P
Sbjct: 67  YAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDP 126

Query: 131 SEMGFDIIKDRAN 144
           SEM  DIIK R N
Sbjct: 127 SEMSLDIIKGRLN 139
[Close]
BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Match: AT2G31200.1 (actin depolymerizing factor 6)

HSP 1 Score: 177.9 bits (450), Expect = 4.300e-45
Identity = 81/136 (59.56%), Postives = 105/136 (77.21%), Query Frame = 1 

		  

Query: 8   ATLGMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDD 67
           A  GM V +E K +F+E++ KK HRY+VFKIDE      V+K G   E YDD  ASLPD+
Sbjct: 11  AISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN 70

Query: 68  DCRYAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQA 127
           DCRYAV+DFDFVT +NC+KSKIFF AW+PS S IRAK+LY+TSKD + R L GIHYE+QA
Sbjct: 71  DCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQA 130

Query: 128 TEPSEMGFDIIKDRAN 144
           T+P+E+  +++++RAN
Sbjct: 131 TDPTEVDLEVLRERAN 146
[Close]
BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Match: AT1G01750.1 (actin depolymerizing factor 11)

HSP 1 Score: 175.6 bits (444), Expect = 2.100e-44
Identity = 80/133 (60.15%), Postives = 105/133 (78.95%), Query Frame = 1 

		  

Query: 11  GMKVTEECKNSFMEMKWKKVHRYIVFKIDEKSGGFTVDKVGASGEGYDDLTASLPDDDCR 70
           GM V++ECK  F+E+K K+ +R+IVFKIDEK+    +DK+G   E Y+D T S+P+D+CR
Sbjct: 7   GMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECR 66

Query: 71  YAVFDFDFVTVDNCRKSKIFFIAWAPSASRIRAKMLYATSKDGIRRALDGIHYEVQATEP 130
           YAV+D+DF T +NC+KSKIFFIAW+P  SR+R+KMLYA+SKD  +R LDGI  E+QAT+P
Sbjct: 67  YAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDP 126

Query: 131 SEMGFDIIKDRAN 144
           SEM  DIIK R N
Sbjct: 127 SEMSLDIIKGRVN 139
The following BLAST results are available for this feature:
BLAST of Spo21129.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902175313|gb|KNA08561.1|3.4e-76100.hypothetical protein SOVF_1615... [more]
gi|731357765|ref|XP_010690383.1|1.4e-7497.2PREDICTED: actin-depolymerizin... [more]
gi|976918947|gb|KVI04098.1|6.4e-6790.1Actin-binding, cofilin/tropomy... [more]
gi|567859938|ref|XP_006422623.1|9.3e-6687.3hypothetical protein CICLE_v10... [more]
gi|747090421|ref|XP_011092897.1|1.2e-6587.2PREDICTED: actin-depolymerizin... [more]
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BLAST of Spo21129.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QPT4_SPIOL2.4e-76100.Uncharacterized protein OS=Spi... [more]
A0A0J8BN78_BETVU9.9e-7597.2Uncharacterized protein OS=Bet... [more]
A0A118K2B0_CYNCS4.5e-6790.1Actin-binding, cofilin/tropomy... [more]
A0A067FPD7_CITSI6.5e-6687.3Uncharacterized protein OS=Cit... [more]
V4RNE8_9ROSI6.5e-6687.3Uncharacterized protein OS=Cit... [more]
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BLAST of Spo21129.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ADF5_ARATH1.3e-6280.2Actin-depolymerizing factor 5 ... [more]
ADF5_ORYSJ3.8e-5974.6Actin-depolymerizing factor 5 ... [more]
ADF9_ARATH4.9e-5975.0Actin-depolymerizing factor 9 ... [more]
ADF_VITVI1.3e-4660.2Actin-depolymerizing factor OS... [more]
ADF11_ORYSJ1.4e-4558.8Actin-depolymerizing factor 11... [more]
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BLAST of Spo21129.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G16700.17.1e-6480.2actin depolymerizing factor 5[more]
AT4G34970.12.8e-6075.0actin depolymerizing factor 9[more]
AT4G00680.12.5e-4560.9actin depolymerizing factor 8[more]
AT2G31200.14.3e-4559.5actin depolymerizing factor 6[more]
AT1G01750.12.1e-4460.1actin depolymerizing factor 11[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 18..140
score: 4.3
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 16..143
score: 6.5
IPR002108Actin-depolymerising factor homology domainPROFILEPS51263ADF_Hcoord: 11..143
score: 3
IPR017904ADF/Cofilin/DestrinPANTHERPTHR11913COFILIN-RELATEDcoord: 7..143
score: 1.3E
NoneNo IPR availablePANTHERPTHR11913:SF16ACTIN-DEPOLYMERIZING FACTOR 5-RELATEDcoord: 7..143
score: 1.3E
NoneNo IPR availableunknownSSF55753Actin depolymerizing proteinscoord: 6..141
score: 8.92

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
biological_process GO:0048825 cotyledon development
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0010072 primary shoot apical meristem specification
biological_process GO:0010100 negative regulation of photomorphogenesis
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0019915 lipid storage
biological_process GO:0009880 embryonic pattern specification
biological_process GO:0006281 DNA repair
biological_process GO:0051301 cell division
biological_process GO:0009909 regulation of flower development
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0070933 histone H4 deacetylation
biological_process GO:0061647 histone H3-K9 modification
biological_process GO:0070932 histone H3 deacetylation
biological_process GO:0009651 response to salt stress
biological_process GO:0006457 protein folding
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006096 glycolytic process
biological_process GO:0045595 regulation of cell differentiation
biological_process GO:0050826 response to freezing
biological_process GO:0042545 cell wall modification
biological_process GO:0042742 defense response to bacterium
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0016246 RNA interference
biological_process GO:0009611 response to wounding
biological_process GO:0009744 response to sucrose
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006396 RNA processing
biological_process GO:0010468 regulation of gene expression
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0007062 sister chromatid cohesion
biological_process GO:0048575 short-day photoperiodism, flowering
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0016310 phosphorylation
biological_process GO:0044248 cellular catabolic process
biological_process GO:0009987 cellular process
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006334 nucleosome assembly
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0016070 RNA metabolic process
biological_process GO:0045490 pectin catabolic process
biological_process GO:0030001 metal ion transport
biological_process GO:0006810 transport
biological_process GO:0000186 activation of MAPKK activity
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005622 intracellular
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005576 extracellular region
cellular_component GO:0005777 peroxisome
cellular_component GO:0000932 P-body
cellular_component GO:0000118 histone deacetylase complex
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016020 membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003723 RNA binding
molecular_function GO:0003779 actin binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005544 calcium-dependent phospholipid binding
molecular_function GO:0008641 ubiquitin-like modifier activating enzyme activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function GO:0097372 NAD-dependent histone deacetylase activity (H3-K18 specific)
molecular_function GO:0046969 NAD-dependent histone deacetylase activity (H3-K9 specific)
molecular_function GO:0046970 NAD-dependent histone deacetylase activity (H4-K16 specific)
molecular_function GO:0004709 MAP kinase kinase kinase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0030570 pectate lyase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression