Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCCAGGAGTAACAATTCATATAGGAGGTACATTTGGAGCACAAGAACTACCACCACACCAACACCGTCATGTAGCACCACCCGCGGCCGGGTGGAAGTCCCCGGTGCCATACTTATTCGGAGGCCTAGCCGCCATGCTCGGACTAATAGCATTTGCGCTAGTCATCCTCGCTTGTTCATATTGGAAACTCTCCGGCCACCTCGACGCAGGTGAGGATTCCGGCGAGGTCACCGGAGATGAGAAACCTAAAGATAGTAATACTAATGCTACCACGGTGTCGTATCCGAGTAGCATACTAGTGATAATGGCGGGTGAGGAGAAGCCTACTTTCTTGGCCATGCCAGCAACTAGTAGAACTTCTTCTTTAGGAGATTATGATCAGAGTGATAAAGCGAGTAGTAGTAGTGGTGGTGCTGACGGTGGTTCTAGTGGCGGAGCTGGTGGTGGTGGGGTGGAGAAAGTGACGGAGTTAGAGACCAGTGGGACAACTCATGAAGAAGAAAAAAGCAGAGAAAGGACAACCTGA ATGAGGCCAGGAGTAACAATTCATATAGGAGGTACATTTGGAGCACAAGAACTACCACCACACCAACACCGTCATGTAGCACCACCCGCGGCCGGGTGGAAGTCCCCGGTGCCATACTTATTCGGAGGCCTAGCCGCCATGCTCGGACTAATAGCATTTGCGCTAGTCATCCTCGCTTGTTCATATTGGAAACTCTCCGGCCACCTCGACGCAGGTGAGGATTCCGGCGAGGTCACCGGAGATGAGAAACCTAAAGATAGTAATACTAATGCTACCACGGTGTCGTATCCGAGTAGCATACTAGTGATAATGGCGGGTGAGGAGAAGCCTACTTTCTTGGCCATGCCAGCAACTAGTAGAACTTCTTCTTTAGGAGATTATGATCAGAGTGATAAAGCGAGTAGTAGTAGTGGTGGTGCTGACGGTGGTTCTAGTGGCGGAGCTGGTGGTGGTGGGGTGGAGAAAGTGACGGAGTTAGAGACCAGTGGGACAACTCATGAAGAAGAAAAAAGCAGAGAAAGGACAACCTGA ATGAGGCCAGGAGTAACAATTCATATAGGAGGTACATTTGGAGCACAAGAACTACCACCACACCAACACCGTCATGTAGCACCACCCGCGGCCGGGTGGAAGTCCCCGGTGCCATACTTATTCGGAGGCCTAGCCGCCATGCTCGGACTAATAGCATTTGCGCTAGTCATCCTCGCTTGTTCATATTGGAAACTCTCCGGCCACCTCGACGCAGGTGAGGATTCCGGCGAGGTCACCGGAGATGAGAAACCTAAAGATAGTAATACTAATGCTACCACGGTGTCGTATCCGAGTAGCATACTAGTGATAATGGCGGGTGAGGAGAAGCCTACTTTCTTGGCCATGCCAGCAACTAGTAGAACTTCTTCTTTAGGAGATTATGATCAGAGTGATAAAGCGAGTAGTAGTAGTGGTGGTGCTGACGGTGGTTCTAGTGGCGGAGCTGGTGGTGGTGGGGTGGAGAAAGTGACGGAGTTAGAGACCAGTGGGACAACTCATGAAGAAGAAAAAAGCAGAGAAAGGACAACCTGA MRPGVTIHIGGTFGAQELPPHQHRHVAPPAAGWKSPVPYLFGGLAAMLGLIAFALVILACSYWKLSGHLDAGEDSGEVTGDEKPKDSNTNATTVSYPSSILVIMAGEEKPTFLAMPATSRTSSLGDYDQSDKASSSSGGADGGSSGGAGGGGVEKVTELETSGTTHEEEKSRERTT Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21159.1 vs. NCBI nr
Match: gi|902205268|gb|KNA15135.1| (hypothetical protein SOVF_101040 [Spinacia oleracea]) HSP 1 Score: 280.0 bits (715), Expect = 2.800e-72 Identity = 155/181 (85.64%), Postives = 164/181 (90.61%), Query Frame = 1
BLAST of Spo21159.1 vs. NCBI nr
Match: gi|902188731|gb|KNA11221.1| (hypothetical protein SOVF_136800, partial [Spinacia oleracea]) HSP 1 Score: 263.1 bits (671), Expect = 3.500e-67 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Spo21159.1 vs. NCBI nr
Match: gi|731354312|ref|XP_010688516.1| (PREDICTED: protein GLUTAMINE DUMPER 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 172.2 bits (435), Expect = 8.200e-40 Identity = 104/178 (58.43%), Postives = 125/178 (70.22%), Query Frame = 1
BLAST of Spo21159.1 vs. NCBI nr
Match: gi|743811728|ref|XP_010929234.1| (PREDICTED: protein GLUTAMINE DUMPER 3-like [Elaeis guineensis]) HSP 1 Score: 118.6 bits (296), Expect = 1.100e-23 Identity = 70/119 (58.82%), Postives = 80/119 (67.23%), Query Frame = 1
BLAST of Spo21159.1 vs. NCBI nr
Match: gi|703124141|ref|XP_010102980.1| (hypothetical protein L484_022857 [Morus notabilis]) HSP 1 Score: 115.5 bits (288), Expect = 9.100e-23 Identity = 68/117 (58.12%), Postives = 77/117 (65.81%), Query Frame = 1
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6K4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101040 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 2.000e-72 Identity = 155/181 (85.64%), Postives = 164/181 (90.61%), Query Frame = 1
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXI3_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_136800 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.500e-67 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTU1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g198890 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.700e-40 Identity = 104/178 (58.43%), Postives = 125/178 (70.22%), Query Frame = 1
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Match: W9RVB1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022857 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.400e-23 Identity = 68/117 (58.12%), Postives = 77/117 (65.81%), Query Frame = 1
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Match: I1GVN9_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_1g31210 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.100e-22 Identity = 74/150 (49.33%), Postives = 90/150 (60.00%), Query Frame = 1
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Match: GDU4_ARATH (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana GN=GDU4 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.000e-21 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Match: GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.500e-21 Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = 1
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Match: GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.500e-20 Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Match: GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.400e-18 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Match: GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 5.700e-17 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Match: AT2G24762.1 (glutamine dumper 4) HSP 1 Score: 104.8 bits (260), Expect = 5.700e-23 Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Match: AT5G57685.1 (glutamine dumper 3) HSP 1 Score: 102.1 bits (253), Expect = 3.700e-22 Identity = 59/112 (52.68%), Postives = 69/112 (61.61%), Query Frame = 1
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Match: AT4G31730.1 (glutamine dumper 1) HSP 1 Score: 100.9 bits (250), Expect = 8.200e-22 Identity = 54/103 (52.43%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Match: AT4G25760.1 (glutamine dumper 2) HSP 1 Score: 94.4 bits (233), Expect = 7.700e-20 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 1
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Match: AT5G24920.1 (glutamine dumper 5) HSP 1 Score: 89.0 bits (219), Expect = 3.200e-18 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21159.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21159.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21159.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21159.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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