Spo21186 (gene)

Overview
NameSpo21186
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L13a-3
LocationSpoScf_01238 : 160406 .. 162826 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAAAAAAGAAAATAATTTTTATAACTCTAGTTGGGTTTAAAAAGCCCAACCATCACAACCCAAAACAACACAGCAACCCTCCTTCATTTTCCCTAAATATTCAGCCACATATAAATACCTTGCAAACCCTAAAATCCTAAAGCCCTCTTTACATTTTCGCTGCTTCCGACTGAGAGGAGAGAGAAAAACTCAGAGAGTAAAAATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGGTATACTTTCTCTTTCCTCTATATTTTCCTGTTTATTTTGATATTAGGATTTTGTATGCTTCGATCTAGTTAATTTTAGGTTTTCCTTGGTTGTTTTTTTGGTGATAGATAGTTAATTTAAAGGGCAATGCATCAAAATTGTGGATTTTTCACCTAATTTGTGTTTCAGAATTGCACTGTCATTTCCCCCTTTTTAATTGAAGTATGATATGTTAAAAAAAGCATTATTCAATGTTTAGCCGTTTCGGTGAAACTATTAAAACTCGAATGTTGATTTATAATATCAAATGAATATTCAATCGAAATGCTGTACCGAACTGCTGATGGGATGTTTGAGTAAAAACTCGAAATTTGAAGTTTTTGCTTGCTTTCATCTTCGTCTACTACAAGAAATATAAACAATTAATAATTTAACTAGTCTTCTACGTGCTTATATTCTTCAGCAAGTACTAATTTAACTGTTTTTATGTAGTATGGTTCCTTAATTATGGAAATGTTTATGTGCAGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGTGAGTTGGGTTTTTTTCCAGATGTTCCGATCATCGTTAATTATGTTGCCCTGTGGGTTTTCTATGTGAGAATGTATGTTTCAGATAATATTATATTGGGAATAAGTGATAATTTTTTTGGTTAATGCAGGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGTATGTATATCCTTGTTTTTTGTTTGTACTCTGTAGTAGATAGTAACTTGTAGCTGAGCTTTGTTTAAATAATCGTGATATTCTTCATAATAAGTGGAATATGTGAATGTGTTTTGTTTCCTACCCTGTAGATATTAAATTCTACTTCGTATATGAAAAAAGCTGAATTGATTATGTGTTATAGCTTATGCTTAGATATTTTAGAAATCCACTGTATCTGTGAATATGATCCTATTTGAATATACATCTTTTTGGTGAAAGAGTTAATTGATTTTTGAACTTGTTTATTTATATGTCCAATTAATCAACTGGGAAGTCTGGGTTTACTACATGAATCTAAACTATACTACATGAACCTGTCCAATACTCACTTGCTGAACTAGAATATAGTAGTCTAGCAGAACCTTGTTAGAAACTTATCCTAATTTTGAGCTAATCATTTTCTTGACTTGCAGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGATGATAGGAGTTTTTTGCCCCGGTTTTGTTTATTCTAGACAAGTAGAGTTTTGTTTTATGGTCTGCTACTTTGTGCACTCAAGTCATCATCTATGCTATACTTTTACCCTAGCTTTCGTTTGCATTGGAATTAATTTTAAAATTTTGTTGGGCCTTTGCGATGGATCTACATATATGTGATTTGCTCATGGAGTTTTGGCATCTTTTCAATTAGCACATCATGTTGTTTCTGCACCTCTCAAAGCGTTTAAACCATTTTCATTTGTTGCACTTGGAGTTGTGATTTGATGTTCTATAATTTTGTTGTTGGCCGGATGGTAGCGATTCCTTAATCTCATTGGCCATGTTTGGTAAAAGTATTTTGACGAGTGTGTAGCAGTTTGTGGCCAATTTAGAGGTTTGACAAGTTGAATTCCTTGTTTGTTTGGACTTTGGAAGATGGTTTCAGCGTTTCAAGATAAGGATTGTATTACCCACCAAATCAATCAATTTAAATCTTAGGGCC

mRNA sequence

AAGAAAAAAGAAAATAATTTTTATAACTCTAGTTGGGTTTAAAAAGCCCAACCATCACAACCCAAAACAACACAGCAACCCTCCTTCATTTTCCCTAAATATTCAGCCACATATAAATACCTTGCAAACCCTAAAATCCTAAAGCCCTCTTTACATTTTCGCTGCTTCCGACTGAGAGGAGAGAGAAAAACTCAGAGAGTAAAAATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGATGATAGGAGTTTTTTGCCCCGGTTTTGTTTATTCTAGACAAGTAGAGTTTTGTTTTATGGTCTGCTACTTTGTGCACTCAAGTCATCATCTATGCTATACTTTTACCCTAGCTTTCGTTTGCATTGGAATTAATTTTAAAATTTTGTTGGGCCTTTGCGATGGATCTACATATATGTGATTTGCTCATGGAGTTTTGGCATCTTTTCAATTAGCACATCATGTTGTTTCTGCACCTCTCAAAGCGTTTAAACCATTTTCATTTGTTGCACTTGGAGTTGTGATTTGATGTTCTATAATTTTGTTGTTGGCCGGATGGTAGCGATTCCTTAATCTCATTGGCCATGTTTGGTAAAAGTATTTTGACGAGTGTGTAGCAGTTTGTGGCCAATTTAGAGGTTTGACAAGTTGAATTCCTTGTTTGTTTGGACTTTGGAAGATGGTTTCAGCGTTTCAAGATAAGGATTGTATTACCCACCAAATCAATCAATTTAAATCTTAGGGCC

Coding sequence (CDS)

ATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGA

Protein sequence

MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLIKLKAKAEKAVEEKLGSQLEILAPVKY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21186.1Spo21186.1mRNA


Homology
[Close]
BLAST of Spo21186.1 vs. NCBI nr
Match: gi|902180030|gb|KNA09457.1| (hypothetical protein SOVF_153350 [Spinacia oleracea])

HSP 1 Score: 398.7 bits (1023), Expect = 6.300e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL
Sbjct: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KLKAKAEKAVEEKLGSQLEILAPVKY
Sbjct: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. NCBI nr
Match: gi|731347477|ref|XP_010685006.1| (PREDICTED: 60S ribosomal protein L13a-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 381.3 bits (978), Expect = 1.000e-102
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSG+MAKRVVVDARHHM GRLASIVAKELLTGQRVVV RCE IALSGGLVRQKMKYL
Sbjct: 1   MVSGSGVMAKRVVVDARHHMCGRLASIVAKELLTGQRVVVTRCEAIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSK VYERKKQL 
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKAVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           +L+ KAEK  EEKLGSQLEILAPVKY
Sbjct: 181 RLRVKAEKTAEEKLGSQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. NCBI nr
Match: gi|685353213|ref|XP_009111853.1| (PREDICTED: 60S ribosomal protein L13a-4 [Brassica rapa])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. NCBI nr
Match: gi|703151242|ref|XP_010110069.1| (60S ribosomal protein L13a-3 [Morus notabilis])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELL GQ+VVVVRCEE+ +SGGLVRQKMKYL
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEELCISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKTKRGAAALARLK YEG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALARLKAYEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQKGHKYCLLGRLS EVGWNHYDTIRELE+KRKER+++ YERKKQL 
Sbjct: 121 KRMVVPDALKVLRLQKGHKYCLLGRLSSEVGWNHYDTIRELEKKRKERAQLAYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEKA EEKLGSQ++ILAPVKY
Sbjct: 181 KLRTKAEKAAEEKLGSQVDILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. NCBI nr
Match: gi|922421069|ref|XP_013616414.1| (PREDICTED: 60S ribosomal protein L13a-4 [Brassica oleracea var. oleracea])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028400 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.400e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL
Sbjct: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KLKAKAEKAVEEKLGSQLEILAPVKY
Sbjct: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERB5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167570 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.300e-103
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSG+MAKRVVVDARHHM GRLASIVAKELLTGQRVVV RCE IALSGGLVRQKMKYL
Sbjct: 1   MVSGSGVMAKRVVVDARHHMCGRLASIVAKELLTGQRVVVTRCEAIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSK VYERKKQL 
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKAVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           +L+ KAEK  EEKLGSQLEILAPVKY
Sbjct: 181 RLRVKAEKTAEEKLGSQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A078F1F5_BRANA (BnaA02g30400D protein OS=Brassica napus GN=BnaC02g38740D PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A078EG18_BRANA (BnaA06g29980D protein OS=Brassica napus GN=BnaC09g02550D PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0D3DBU6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 206 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 265

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 266 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 325

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 326 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 385

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 386 KLRAKAEKVAEEKLGAQLEILAPVKY 411
[Close]
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.000e-99
Identity = 182/206 (88.35%), Postives = 193/206 (93.69%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASI AKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER+ VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EEKLG+QL+ILAPVKY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.200e-98
Identity = 181/206 (87.86%), Postives = 193/206 (93.69%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLAS+VAK+LL GQ +VVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKV+EGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER++ VYERKKQL 
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206
[Close]
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.000e-98
Identity = 180/206 (87.38%), Postives = 192/206 (93.20%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVD RHHMLGRLAS  AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+V+YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EE+LGSQL++LAPVKY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206
[Close]
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.700e-98
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHM GRLASI+AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+ +YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LA +KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206
[Close]
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.200e-94
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELL GQ+VV+VR EEI +SGGLVRQKMKYL
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIH  APSKIFWRTVRGMIPHKTKRG  ALARLKVYEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQKGHKYCLLG+LS EVGWN+YDTI+ELE+KRKERS+VVYERKKQL 
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAE+  +EKLGSQL+ILAPVKY
Sbjct: 181 KLRVKAEQVAQEKLGSQLDILAPVKY 205
[Close]
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT5G48760.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 361.3 bits (926), Expect = 3.900e-100
Identity = 182/206 (88.35%), Postives = 193/206 (93.69%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASI AKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER+ VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EEKLG+QL+ILAPVKY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206
[Close]
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT4G13170.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 359.8 bits (922), Expect = 1.100e-99
Identity = 180/206 (87.38%), Postives = 192/206 (93.20%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVD RHHMLGRLAS  AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+V+YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EE+LGSQL++LAPVKY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206
[Close]
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT3G24830.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 359.4 bits (921), Expect = 1.500e-99
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHM GRLASI+AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+ +YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LA +KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206
[Close]
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT3G07110.2 (Ribosomal protein L13 family protein)

HSP 1 Score: 355.9 bits (912), Expect = 1.700e-98
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 1 

		  

Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLAS+VAK+LL GQ +VVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKV+EGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIR-ELEEKRKERSKVVYERKKQL 180
           KR+VVPDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ ELE KRKER++ VYERKKQL
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELENKRKERAQAVYERKKQL 180

Query: 181 IKLKAKAEKAVEEKLGSQLEILAPVKY 207
            KL+AKAEK  EEKLGSQL++LAPVKY
Sbjct: 181 SKLRAKAEKVAEEKLGSQLDVLAPVKY 207
[Close]
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT1G78630.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 58.2 bits (139), Expect = 7.100e-9
Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 1 

		  

Query: 13  VVDARHHMLGRLASIVAKELL------------TGQRVVVVRCEEIALSGGLVRQKMKYL 72
           VVDA   +LGRLAS +A  +              G  V+VV  E++A+SG    QK+   
Sbjct: 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRR 166

Query: 73  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 132
              R    T  +   +  R P +I    VRGM+P K + G A    LKVY+G   P++  
Sbjct: 167 HSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KGRLGRALFNHLKVYKGPDHPHEAQ 226

Query: 133 KRVVVPDALKVLRLQK 137
           K + +P   K ++LQK
Sbjct: 227 KPLDLPIRDKRIQLQK 241
The following BLAST results are available for this feature:
BLAST of Spo21186.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180030|gb|KNA09457.1|6.3e-108100.hypothetical protein SOVF_1533... [more]
gi|731347477|ref|XP_010685006.1|1.0e-10294.6PREDICTED: 60S ribosomal prote... [more]
gi|685353213|ref|XP_009111853.1|1.2e-9889.3PREDICTED: 60S ribosomal prote... [more]
gi|703151242|ref|XP_010110069.1|1.2e-9889.360S ribosomal protein L13a-3 [... [more]
gi|922421069|ref|XP_013616414.1|1.2e-9889.3PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RU85_SPIOL4.4e-108100.Uncharacterized protein OS=Spi... [more]
A0A0J8ERB5_BETVU7.3e-10394.6Uncharacterized protein OS=Bet... [more]
A0A078F1F5_BRANA8.3e-9989.3BnaA02g30400D protein OS=Brass... [more]
A0A078EG18_BRANA8.3e-9989.3BnaA06g29980D protein OS=Brass... [more]
A0A0D3DBU6_BRAOL8.3e-9989.3Uncharacterized protein OS=Bra... [more]
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BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
R13A4_ARATH7.0e-9988.360S ribosomal protein L13a-4 O... [more]
R13A1_ARATH1.2e-9887.860S ribosomal protein L13a-1 O... [more]
R13A3_ARATH2.0e-9887.360S ribosomal protein L13a-3 O... [more]
R13A2_ARATH2.7e-9886.860S ribosomal protein L13a-2 O... [more]
RL13A_LUPLU5.2e-9485.960S ribosomal protein L13a OS=... [more]
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BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G48760.13.9e-10088.3Ribosomal protein L13 family p... [more]
AT4G13170.11.1e-9987.3Ribosomal protein L13 family p... [more]
AT3G24830.11.5e-9986.8Ribosomal protein L13 family p... [more]
AT3G07110.21.7e-9887.4Ribosomal protein L13 family p... [more]
AT1G78630.17.1e-933.8Ribosomal protein L13 family p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF360S RIBOSOMAL PROTEIN L13Acoord: 1..204
score: 3.7E
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMsTIGR01077TIGR01077coord: 12..153
score: 4.5
IPR005822Ribosomal protein L13GENE3D3.90.1180.10coord: 12..153
score: 1.0
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 11..135
score: 19
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 1..204
score: 3.7E
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 12..118
score: 1.6
IPR005822Ribosomal protein L13unknownSSF52161Ribosomal protein L13coord: 12..154
score: 4.32
IPR023563Ribosomal protein L13, conserved sitePROSITEPS00783RIBOSOMAL_L13coord: 89..112
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009651 response to salt stress
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0009809 lignin biosynthetic process
biological_process GO:0006555 methionine metabolic process
biological_process GO:0006730 one-carbon metabolic process
biological_process GO:0006556 S-adenosylmethionine biosynthetic process
biological_process GO:0015976 carbon utilization
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006020 inositol metabolic process
biological_process GO:0048653 anther development
biological_process GO:0051258 protein polymerization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006457 protein folding
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0007049 cell cycle
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0048478 replication fork protection
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0006364 rRNA processing
biological_process GO:0007020 microtubule nucleation
biological_process GO:0030001 metal ion transport
biological_process GO:0007017 microtubule-based process
biological_process GO:0006412 translation
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0035246 peptidyl-arginine N-methylation
biological_process GO:0006560 proline metabolic process
biological_process GO:0006566 threonine metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0016070 RNA metabolic process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0007030 Golgi organization
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007018 microtubule-based movement
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0048767 root hair elongation
biological_process GO:0010162 seed dormancy process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006833 water transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0006414 translational elongation
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0071555 cell wall organization
biological_process GO:0080001 mucilage extrusion from seed coat
biological_process GO:0006952 defense response
biological_process GO:0048359 mucilage metabolic process involved in seed coat development
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0034968 histone lysine methylation
biological_process GO:0009909 regulation of flower development
biological_process GO:0005982 starch metabolic process
biological_process GO:0009932 cell tip growth
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process
biological_process GO:0044205 'de novo' UMP biosynthetic process
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006525 arginine metabolic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0000028 ribosomal small subunit assembly
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0010015 root morphogenesis
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006626 protein targeting to mitochondrion
biological_process GO:0008361 regulation of cell size
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0007389 pattern specification process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009926 auxin polar transport
biological_process GO:0008356 asymmetric cell division
biological_process GO:0001510 RNA methylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0001731 formation of translation preinitiation complex
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0006396 RNA processing
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0009116 nucleoside metabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0016310 phosphorylation
biological_process GO:0009853 photorespiration
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0016020 membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0031429 box H/ACA snoRNP complex
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005773 vacuole
cellular_component GO:0005840 ribosome
cellular_component GO:0005829 cytosol
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0044424 intracellular part
cellular_component GO:0005874 microtubule
cellular_component GO:0048046 apoplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004749 ribose phosphate diphosphokinase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030731 guanidinoacetate N-methyltransferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0004588 orotate phosphoribosyltransferase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0050661 NADP binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function GO:0004073 aspartate-semialdehyde dehydrogenase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0009678 hydrogen-translocating pyrophosphatase activity
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0008097 5S rRNA binding
molecular_function GO:0004590 orotidine-5'-phosphate decarboxylase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0070402 NADPH binding
molecular_function GO:0004455 ketol-acid reductoisomerase activity
molecular_function GO:0016853 isomerase activity
molecular_function GO:0004332 fructose-bisphosphate aldolase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0003723 RNA binding
molecular_function GO:0042973 glucan endo-1,3-beta-D-glucosidase activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016274 protein-arginine N-methyltransferase activity
molecular_function GO:0004478 methionine adenosyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo050640.84Barchart | Table
Spo176620.82Barchart | Table
Spo063180.82Barchart | Table
Spo059090.82Barchart | Table
Spo192360.81Barchart | Table
Spo029280.80Barchart | Table
Spo078210.80Barchart | Table
Spo232200.80Barchart | Table
Spo070170.79Barchart | Table
Spo144040.79Barchart | Table
Spo116790.79Barchart | Table
Spo069040.78Barchart | Table
Spo052440.78Barchart | Table
Spo127590.78Barchart | Table
Spo236220.78Barchart | Table
Spo038020.78Barchart | Table
Spo070160.78Barchart | Table
Spo135610.77Barchart | Table
Spo206470.77Barchart | Table
Spo029420.77Barchart | Table
Spo080820.77Barchart | Table
Spo209970.76Barchart | Table
Spo123110.75Barchart | Table
Spo230010.74Barchart | Table
Spo132880.74Barchart | Table
Spo134810.74Barchart | Table
Spo234980.74Barchart | Table
Spo023970.74Barchart | Table
Spo230380.74Barchart | Table
Spo043900.74Barchart | Table
Spo194400.74Barchart | Table
Spo194130.74Barchart | Table
Spo253060.74Barchart | Table
Spo174950.74Barchart | Table
Spo172710.74Barchart | Table
Spo126810.74Barchart | Table
Spo020110.73Barchart | Table
Spo076680.73Barchart | Table
Spo037010.73Barchart | Table
Spo225050.73Barchart | Table
Spo101470.73Barchart | Table
Spo009680.73Barchart | Table
Spo121910.73Barchart | Table
Spo059490.72Barchart | Table
Spo179030.72Barchart | Table
Spo015350.72Barchart | Table
Spo252060.72Barchart | Table
Spo207890.72Barchart | Table
Spo039790.72Barchart | Table
Spo010610.72Barchart | Table
Spo043810.71Barchart | Table
Spo205190.71Barchart | Table
Spo204600.71Barchart | Table
Spo013980.71Barchart | Table
Spo229360.71Barchart | Table
Spo188740.71Barchart | Table
Spo051140.71Barchart | Table
Spo129010.70Barchart | Table
Spo068370.70Barchart | Table
Spo071450.70Barchart | Table
Spo118500.70Barchart | Table
Spo132790.70Barchart | Table
Spo178980.70Barchart | Table
Spo180940.70Barchart | Table
Spo187190.70Barchart | Table
Spo202840.70Barchart | Table
Spo268840.70Barchart | Table
Spo271540.69Barchart | Table
Spo249020.69Barchart | Table
Spo088160.69Barchart | Table
Spo067060.68Barchart | Table
Spo194410.68Barchart | Table
Spo229390.68Barchart | Table
Spo157510.68Barchart | Table
Spo019990.68Barchart | Table
Spo036260.67Barchart | Table
Spo185050.67Barchart | Table
Spo264420.67Barchart | Table
Spo189010.67Barchart | Table
Spo192000.67Barchart | Table
Spo067420.67Barchart | Table
Spo052750.67Barchart | Table
Spo045270.67Barchart | Table
Spo210680.67Barchart | Table
Spo219220.67Barchart | Table
Spo223100.67Barchart | Table
Spo223940.67Barchart | Table
Spo251320.67Barchart | Table
Spo251760.67Barchart | Table
Spo171090.66Barchart | Table
Spo025340.66Barchart | Table
Spo112880.66Barchart | Table
Spo232410.66Barchart | Table
Spo015460.66Barchart | Table
Spo014030.66Barchart | Table
Spo068570.66Barchart | Table
Spo253490.66Barchart | Table
Spo010560.66Barchart | Table
Spo057610.66Barchart | Table
Spo160330.66Barchart | Table
Spo010920.66Barchart | Table
Spo222150.66Barchart | Table
Spo143800.66Barchart | Table
Spo032000.66Barchart | Table
Spo176530.66Barchart | Table
Spo029890.66Barchart | Table
Spo208570.65Barchart | Table
Spo069440.65Barchart | Table
Spo157200.65Barchart | Table
Spo137940.65Barchart | Table
Spo056320.65Barchart | Table
Spo105970.65Barchart | Table
Spo123040.65Barchart | Table
Spo035730.65Barchart | Table
Spo119430.65Barchart | Table