Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTACTCTTCCATGGCAGACATTAAAACTCTCTACTCTAATTAATCAAATGTTCATCTTCTCGCTAAACGTAATTTCTGAATTGATGTCCAATAATTCCCCAGCAAGAAGGTATTTTGTTCTTTTTGTTGTGATCAATTAGGCTTTAATTTTGAAATTAGGCTTTCGCAATTATTGAACCAATTACAAATTGAACCAACAAGTAAATTTTGATTGCGAAATTAGTAAATTTTGATTGCAAAATTGTTAAATTTTGATTCCGAAATTGTTAAACTTGGATTTGCTCATGTAGAATTTCGTGGGGGTTTAAGCCCTGTTGTTGTTGTATTATTTTGGTTTGTTAATTTTAGGAAATCAAAGTGATTTTTCAGTGTAAAAATGGCTAATTTTCTTGCTTTTTGTTTTGGGTTTTTTTTTCCTGGTAATTTCTTGCATAGTTGTTCACCTGTGAATTTGAAAGCATTTGGTCTCTGGTGGTGCTCACACTGTCGTCTTTTTAATTGTGAATGGAGCAATTTTAGTACAGAAATCAGTAGGTGTAGTATTTTAAAAACTGATGCATCAAGTTTGTAAGTAATCCAAGATCTGTGTGAATTATCTAAACTAATGCCTGTGATTTACCTTTTATAATGTTTGATCATTTATGGTTATATATTGTACCCTTCAGCTCCAGGTCTTGTTAATTGCACATTAGCAATGGAGCTGTAAAGCATAAACTTCACGCAATTAAAGAAACTCCCACAAATGTATCTCATGTCAATTGTGGATCATTGGCCAAACCCTTGAAGTTATATTGTTCTTCTGTTGCGGAGTAAGCTAGTTCTCTTTTAGTCTTTCCTATTCAAAATGGAAATATATCATTTGGATCAGTTGGTTTTTGGTTTTTTCGTTGATTGTGGAGTAAGCCCTGTTGTTGTAATATATCAAATGTATCTCATGTCAATTGTGGATCAATGGCCAAACCCATGATGTTTTTGGTTGATGATGCTGTTTGGCTGATTGTTTTTTCCCCCTGGTGTTGTGGTCTGATATGTCTGCTTGTTGTAGCAAAGTTTCTGATCTAAAATGAAGAAGTTGTTATTGCCGCCGCTGCTGCCGAAGTAGTTGCATTGGCAAGGGCAACAGCCAAGCTTGCAAAGGATGCCGCACTGATGGCCGTTAATAGTCAGCCGACAAAGCACTTGTGAGTACCCATTCACGGTGGGTGAAAGCAGTAGCAGCAGATACTTGCGCACCCATCGTTAGGATGCTTTGTGAGCTGATTCCGAGCTGTCGTTATTCGTTTCTTTTAAGGTATTAATATTGCCTATTAGCTCAACTGGTAGACCTTTGTGCGATTGCACAATGGTGTAGGTTCGAATCCTACATAGGCAACTCTTTGTATTTTGTTATGATATCAAAATGAGAAAATTTTTAAAAACATTTGCTCATTTTTGTAAAATATCTAAATGAAATAAAAAATTTTAAGTTAAGAAATTAAAAATTTTAAAAATATTTCCTCATTTGTGTAAACAATAAAAAAATGAGCAAATTTTTTGAATGTTGAAATATGAGATTTTAGAATATTTGTTCATTAAGACACAGTGAGCAAAGTTTTGAATATTTAGAAACCCGAACTTTAAAATAAAAGTAATGAGCAAAAATATTTGCTCATTTGTGTAAAGTATAAAAAAATGAGCAATTGTTTTGAGTATTAAGTAATCTTAGATATTAAAATATTTGCTCATTTAGACATAATGAGCAAAAGTTTTGAATATTAACTTTAAATTTTTAAAAAAACTATAAAAATTGAACAATTTTTTTGAATATTAAGTAATCTGAGATTTTAAAATATTAGCTCTGATAAGCGTGTTTTCCGTCGTTGATAGAAAACCACCTATGCAAACAATATTTATAAAACCACTTCAACTACCGGCAAGCGGTAAGCAAAGGGATCGTCCCAAAGAAACGGTGAATTATTGAGTTGGAAGTCAATCTAGTTCGATCAAGGATTTGTTTTGAATTGTCAATCGTGCCCAACAACCGTGCGATCGCACGACTGGAACTTGGCTAATTCTCATAAAATCCTCGTGTGCTTGCATAGGAATTCAGTGCGAGCGCACAGAAATTCCGTGCGAGCGCACACTTCTGTGGTGCGAACGCACAACATCCCTTGGAGTTCCTGCATCAAATTTCCGGATTCGTGCGAACGCACACTTTGGGGCACGAATGCACATATTGCCTTGACCTTGGAGACAACTTTGTAGACCCGTGCGAACGCACGTAAATTCCGTGCGATCGCACAGGACCTGTTCGAGCAATTCTCAGTTATTTTCCATCATTTTCAACATTTTTACCTGAAAAGTGCAAAGATGGTATAAGGGGATAAAAATGCAGCAAAACTATATAAAACTATCAAAAAAGCATAATAAAACTCTATAAAATCCTAAGCCTAGAGCGACATAAATTCCGCTCATCATGCTCATTTAGACACAATAAGCAAAAGTTTTGAATATTAACAAATACGAACTTCAAAAATTTTAAAAATGAGCAAAAATATTTGCTCATTTGTGTAAACTATAAGAAATGAGCAAAAATATTTGCTCATTTGTGTAAATTAAAAAAAATGAGCAAATTTTTTGAATGTTAAGTAATCTGATATTTTAAAATATTTTCTCATTTAGACACAATGAGCAAAATCTTTGAACATTACCAAACATGAACTTTAAAATTTTAAAAATGAGCAAAAATATTTGCTCATTTGGGTAAACTATAAAAAATAAGCAAATTTATTTGCCCATTTAGACACGATGAGCAAAAGTTTTCAATATTTGCAAATCTGAACTTTAAAATTTTAAAAATGAGCAAAAGTATTTGCTCATTTGTGTAAACTATAAAAAATGAGCAAATTTATTTGCTCATTTAGTAACGATGAGCAAAAGTTTTCAATATTTACAAATCCGAACTTTAAAGTATTTGTAGGGGGGGGGGGTTTAAATATTTTAGCAGAAGATGGAGATCATGAATGTGAACGAGAATGACGCCAATGCAAAGCAAAAATTGCCAAAGATGGTGTATGACTACTATGCATCTGGTGCAGAAGACCAATGGACTCTGGCTGAGAACAGAAATGCTTTCTCCAAGATCCTATAAGACTGCCTTACAAGTTTGTTTCCCTTTATGCATATGTTTCTGTTTCTGTTTCTGTTTGTTCGTAGTGGAGTAATAAATATCCGCATTAATACAGGGTTCACCCACGTATCCTTATTGATGTAACCAACATCGACATGACGACAACTATCTTGGGATTCAAGATCTCAATGCCTATCATGATAGCCCCAACTGTGGATGGCCTTTTGACATTTCTTAGTGCACTGCTGGGGTATAGTGCTTACCATGTTACCATGCTTGTTATCCCTATCTCAATTATTTTTCGGTGGACCTTGTACTTGGATCACACTCTTAAACGCAACGCCAAATTGGCCTTTATCTTCAATTTTTTTGTTGGCTAGGTCTCTTTGAATTCCATGTCAGAGCTTCTGAGGTTAACCAAAATTGTTCTCAGTAATTCTTTCATGGAATAGATCAGTGATTATTTTCAGCTGTTGTAGGTGTTGTGACTCGGATATAGTCATGTATGTATAACCATTTACCCTGCAGTTGGCATTTTTTTTCCCTTTTACTTGTTAACGAATAGAGACTGTTCGGGTGGTTTCACCGTCCATCATACAGTACTCTTGATGAGTTTACATTAGAGTTTCAGCATTTACTTGTGTAGAATGTAAACTGGTGTCACAATACTTGGTATAATCTAAGTAGTCTTATAAGCTTACAGAATCCAGCATGTACTCTTATTAGCTGTTACTCAATTAAGCATGCTTTTGAGATTGAATTTTCTTGATGTTTCTATATTCAGGTATACAAGGACAGGAATGTAGTTGCTCAACTTATGAGAAGAGCTGAGAGGGCTGGCTTCAAGGCCATTGCCCTTACTGTTGACACACCCCGTTTGGGACGTAGAGAAGCTGATATCAAGAACAGGTATGAAACACATTCTCCTGTTTCCAAAGGAATGAGTCAGGGGTCTTTTGTGATGGTTTATTTATATTTGGTTTTTTAATTTTCAGGTTTGTTTTACCACCTTTTCTAACATTGAAGAACTTTGAGGGTATTGACCTGGGCAAGATGGACAAAGTAAATGTTTAACAATACCAAGATGATTGGAACCAAAGAACTCTTATGTTATTATGTAAACTATATCTAATCTATTTGATATTATTATGCAGGCAAATGACTCTGGCCTTGAATCATATGTCGCTGGGCAGATTGATCGATCCCTGAGCTGGAGGGTAATGTGGGATGGTATTTGAACTTTGTTTGTACTTCTCTGTGGTTGGAAACTATTTCTAGGAGACAGATTAATTTCAAGATAACTTGAGATTAGTCATCTGATCAACGTGTTTTTACTTGGAATTAAACAGGATGTTACGTGGCTTCAGACAATCACTAGCCTCCCCATCCTTGTGAAGGGTGTAATTACATCTGAGGATGGTAAGATTATTGGGCTTAATTTTTCATGAATTTATACAAATCTTGGTCAGTTATCTTATATTTCATATCTTTTTAGCAAGACTGGCCGTTCAACAGGGGCAGTTGGATCCATTGTATCCAACCATAGAGCTCGCCAACTTGATTATGTTCCTGCTACTATAATGGCTCTTGAAGAGGTAAACTGTCTTTTTTTTTCTCAATATATAATCCTAGGGAGGTTGTAATATAAGTGTTTAATTGGTGAAAACTACCTGAACTCTTCAGGTTGTGAAAGCAACACAAGGTCGCATTCTTGTTTTCTGGGATGGTGGTGTTCATCGTGGAACTGACATTTTCAAAGCATTGGCATTGGGTGCCGCTGGAGTATTTGTAAGTAGAATCATATTGCATTGAGATTTTTATTTGGGTTTTTTTGGTACTGATTCAATGATGGTGTTGTGTACTCAGATTGGAAGGCCCGTGGTGTTTTCCCTGGCTCTAGAAGGAGAGGCTAGTGTTAAGAAAGTATAAGAAATAAG ACTACTCTTCCATGGCAGACATTAAAACTCTCTACTCTAATTAATCAAATGTTCATCTTCTCGCTAAACGTAATTTCTGAATTGATGTCCAATAATTCCCCAGCAAGAAGCTCCAGGTCTTAAGTTGTTATTGCCGCCGCTGCTGCCGAAGTAGTTGCATTGGCAAGGGCAACAGCCAAGCTTGCAAAGGATGCCGCACTGATGGCCGTTAATAGTCAGCCGACAAAGCACTTGGTTCACCCACGTATCCTTATTGATGTAACCAACATCGACATGACGACAACTATCTTGGGATTCAAGATCTCAATGCCTATCATGATAGCCCCAACTGTGGATGGCCTTTTGACATTTCTTAGTGCACTGCTGGGGTATAGTGCTTACCATGTATACAAGGACAGGAATGTAGTTGCTCAACTTATGAGAAGAGCTGAGAGGGCTGGCTTCAAGGCCATTGCCCTTACTGTTGACACACCCCGTTTGGGACGTAGAGAAGCTGATATCAAGAACAGGTTTGTTTTACCACCTTTTCTAACATTGAAGAACTTTGAGGGTATTGACCTGGGCAAGATGGACAAAGCAAATGACTCTGGCCTTGAATCATATGTCGCTGGGCAGATTGATCGATCCCTGAGCTGGAGGGATGTTACGTGGCTTCAGACAATCACTAGCCTCCCCATCCTTGTGAAGGGTGTAATTACATCTGAGGATGGGGCAGTTGGATCCATTGTATCCAACCATAGAGCTCGCCAACTTGATTATGTTCCTGCTACTATAATGGCTCTTGAAGAGGTTGTGAAAGCAACACAAGGTCGCATTCTTGTTTTCTGGGATGGTGGTGTTCATCGTGGAACTGACATTTTCAAAGCATTGGCATTGGGTGCCGCTGGAGTATTTATTGGAAGGCCCGTGGTGTTTTCCCTGGCTCTAGAAGGAGAGGCTAGTGTTAAGAAAGTATAAGAAATAAG ATGGCCGTTAATAGTCAGCCGACAAAGCACTTGGTTCACCCACGTATCCTTATTGATGTAACCAACATCGACATGACGACAACTATCTTGGGATTCAAGATCTCAATGCCTATCATGATAGCCCCAACTGTGGATGGCCTTTTGACATTTCTTAGTGCACTGCTGGGGTATAGTGCTTACCATGTATACAAGGACAGGAATGTAGTTGCTCAACTTATGAGAAGAGCTGAGAGGGCTGGCTTCAAGGCCATTGCCCTTACTGTTGACACACCCCGTTTGGGACGTAGAGAAGCTGATATCAAGAACAGGTTTGTTTTACCACCTTTTCTAACATTGAAGAACTTTGAGGGTATTGACCTGGGCAAGATGGACAAAGCAAATGACTCTGGCCTTGAATCATATGTCGCTGGGCAGATTGATCGATCCCTGAGCTGGAGGGATGTTACGTGGCTTCAGACAATCACTAGCCTCCCCATCCTTGTGAAGGGTGTAATTACATCTGAGGATGGGGCAGTTGGATCCATTGTATCCAACCATAGAGCTCGCCAACTTGATTATGTTCCTGCTACTATAATGGCTCTTGAAGAGGTTGTGAAAGCAACACAAGGTCGCATTCTTGTTTTCTGGGATGGTGGTGTTCATCGTGGAACTGACATTTTCAAAGCATTGGCATTGGGTGCCGCTGGAGTATTTATTGGAAGGCCCGTGGTGTTTTCCCTGGCTCTAGAAGGAGAGGCTAGTGTTAAGAAAGTATAA MAVNSQPTKHLVHPRILIDVTNIDMTTTILGFKISMPIMIAPTVDGLLTFLSALLGYSAYHVYKDRNVVAQLMRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLESYVAGQIDRSLSWRDVTWLQTITSLPILVKGVITSEDGAVGSIVSNHRARQLDYVPATIMALEEVVKATQGRILVFWDGGVHRGTDIFKALALGAAGVFIGRPVVFSLALEGEASVKKV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21282.1 vs. NCBI nr
Match: gi|641831439|gb|KDO50497.1| (hypothetical protein CISIN_1g017492mg [Citrus sinensis]) HSP 1 Score: 362.8 bits (930), Expect = 4.700e-97 Identity = 192/255 (75.29%), Postives = 209/255 (81.96%), Query Frame = 1
BLAST of Spo21282.1 vs. NCBI nr
Match: gi|902183035|gb|KNA10032.1| (hypothetical protein SOVF_148120 [Spinacia oleracea]) HSP 1 Score: 352.4 bits (903), Expect = 6.300e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo21282.1 vs. NCBI nr
Match: gi|7431428|pir||T10242 ((S)-2-hydroxy-acid oxidase (EC 1.1.3.15) - cucurbit) HSP 1 Score: 351.7 bits (901), Expect = 1.100e-93 Identity = 192/281 (68.33%), Postives = 214/281 (76.16%), Query Frame = 1
BLAST of Spo21282.1 vs. NCBI nr
Match: gi|189418957|gb|ACD93720.1| (glycolate oxidase [Mikania micrantha]) HSP 1 Score: 351.7 bits (901), Expect = 1.100e-93 Identity = 195/281 (69.40%), Postives = 211/281 (75.09%), Query Frame = 1
BLAST of Spo21282.1 vs. NCBI nr
Match: gi|734350507|gb|KHN12454.1| (Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Glycine soja]) HSP 1 Score: 350.5 bits (898), Expect = 2.400e-93 Identity = 185/255 (72.55%), Postives = 206/255 (80.78%), Query Frame = 1
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Match: A0A067EH02_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017492mg PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 3.300e-97 Identity = 192/255 (75.29%), Postives = 209/255 (81.96%), Query Frame = 1
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRV9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148120 PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.400e-94 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Match: A0A0E0Q440_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.400e-94 Identity = 189/255 (74.12%), Postives = 206/255 (80.78%), Query Frame = 1
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Match: A0A0E0HWI0_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.400e-94 Identity = 189/255 (74.12%), Postives = 206/255 (80.78%), Query Frame = 1
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Match: Q39640_9ROSI (Glycolate oxidase OS=Cucurbita cv. Kurokawa Amakuri PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 7.500e-94 Identity = 192/281 (68.33%), Postives = 214/281 (76.16%), Query Frame = 1
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 2.000e-95 Identity = 200/281 (71.17%), Postives = 212/281 (75.44%), Query Frame = 1
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Match: GLO5_ARATH (Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Arabidopsis thaliana GN=GLO5 PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 3.600e-89 Identity = 181/281 (64.41%), Postives = 207/281 (73.67%), Query Frame = 1
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Match: GLO1_ARATH (Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana GN=GLO1 PE=1 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.000e-88 Identity = 184/281 (65.48%), Postives = 206/281 (73.31%), Query Frame = 1
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Match: GLO3_ORYSI (Peroxisomal (S)-2-hydroxy-acid oxidase GLO3 OS=Oryza sativa subsp. indica GN=GLO3 PE=3 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 6.800e-88 Identity = 179/281 (63.70%), Postives = 203/281 (72.24%), Query Frame = 1
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Match: GLO3_ORYSJ (Peroxisomal (S)-2-hydroxy-acid oxidase GLO3 OS=Oryza sativa subsp. japonica GN=GLO3 PE=2 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 6.800e-88 Identity = 179/281 (63.70%), Postives = 203/281 (72.24%), Query Frame = 1
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Match: AT4G18360.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 329.3 bits (843), Expect = 2.000e-90 Identity = 181/281 (64.41%), Postives = 207/281 (73.67%), Query Frame = 1
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Match: AT3G14420.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 325.9 bits (834), Expect = 2.200e-89 Identity = 184/281 (65.48%), Postives = 206/281 (73.31%), Query Frame = 1
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Match: AT3G14415.2 (Aldolase-type TIM barrel family protein) HSP 1 Score: 312.4 bits (799), Expect = 2.600e-85 Identity = 178/287 (62.02%), Postives = 204/287 (71.08%), Query Frame = 1
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Match: AT3G14130.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 242.3 bits (617), Expect = 3.300e-64 Identity = 138/281 (49.11%), Postives = 175/281 (62.28%), Query Frame = 1
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Match: AT3G14150.1 (Aldolase-type TIM barrel family protein) HSP 1 Score: 234.2 bits (596), Expect = 8.900e-62 Identity = 133/281 (47.33%), Postives = 173/281 (61.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21282.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21282.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21282.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21282.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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