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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTCACCATGTTTGCAGTAGACAAATTACTCGAAACCATTACAAAGAAATACAAAACTCCTACAACAAGATCAAAGCTTCAAAGAAGTCCTAAAATTGTTGGGTATGAGCGCGAGGATGATTATTCCGAGGAATCAATTAGGGAGCCTCTTCTAATTATGTCGTCTCAAGACGAGATTAATGAGTGTGATCAAGTGATGAAGAACATAACTAAAGGGGTAAGTAATAAAAACAATAATGATAATAACATAAATAATAATGTTAGAGTAAAAGTTTTGTTAACAAAAGCAGAAGCAGCAAAGTTGTTAGCAAAGTGTAAAGGGGATGAGGGGGGTTTGGATTTTAAAGATGTGGTTAATCAACTTATGAAGCTTCCCCCTCAACGGATTAATGTTGTTTCGTCTCCTTCCAAAGATTTCGACCTCGAAACCATCTCAGAAGAGGAGGAGGAGGAGGAGGAGTACGACGAGTATCAGAAGAAGAATGTATAA mRNA sequence ATGGTCACCATGTTTGCAGTAGACAAATTACTCGAAACCATTACAAAGAAATACAAAACTCCTACAACAAGATCAAAGCTTCAAAGAAGTCCTAAAATTGTTGGGTATGAGCGCGAGGATGATTATTCCGAGGAATCAATTAGGGAGCCTCTTCTAATTATGTCGTCTCAAGACGAGATTAATGAGTGTGATCAAGTGATGAAGAACATAACTAAAGGGGTAAGTAATAAAAACAATAATGATAATAACATAAATAATAATGTTAGAGTAAAAGTTTTGTTAACAAAAGCAGAAGCAGCAAAGTTGTTAGCAAAGTGTAAAGGGGATGAGGGGGGTTTGGATTTTAAAGATGTGGTTAATCAACTTATGAAGCTTCCCCCTCAACGGATTAATGTTGTTTCGTCTCCTTCCAAAGATTTCGACCTCGAAACCATCTCAGAAGAGGAGGAGGAGGAGGAGGAGTACGACGAGTATCAGAAGAAGAATGTATAA Coding sequence (CDS) ATGGTCACCATGTTTGCAGTAGACAAATTACTCGAAACCATTACAAAGAAATACAAAACTCCTACAACAAGATCAAAGCTTCAAAGAAGTCCTAAAATTGTTGGGTATGAGCGCGAGGATGATTATTCCGAGGAATCAATTAGGGAGCCTCTTCTAATTATGTCGTCTCAAGACGAGATTAATGAGTGTGATCAAGTGATGAAGAACATAACTAAAGGGGTAAGTAATAAAAACAATAATGATAATAACATAAATAATAATGTTAGAGTAAAAGTTTTGTTAACAAAAGCAGAAGCAGCAAAGTTGTTAGCAAAGTGTAAAGGGGATGAGGGGGGTTTGGATTTTAAAGATGTGGTTAATCAACTTATGAAGCTTCCCCCTCAACGGATTAATGTTGTTTCGTCTCCTTCCAAAGATTTCGACCTCGAAACCATCTCAGAAGAGGAGGAGGAGGAGGAGGAGTACGACGAGTATCAGAAGAAGAATGTATAA Protein sequence MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEINECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVNQLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
|---|
| Spo21362.1 | Spo21362.1 | mRNA |
Homology
BLAST of Spo21362.1 vs. NCBI nr
Match: gi|902196817|gb|KNA13221.1| (hypothetical protein SOVF_118660 [Spinacia oleracea]) HSP 1 Score: 305.4 bits (781), Expect = 5.800e-80 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
Query: 1 MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI 60
MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI
Sbjct: 1 MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI 60
Query: 61 NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN 120
NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN
Sbjct: 61 NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN 120
Query: 121 QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV 164
QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV
Sbjct: 121 QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV 163
BLAST of Spo21362.1 vs. NCBI nr
Match: gi|731330733|ref|XP_010676292.1| (PREDICTED: uncharacterized protein LOC104892151 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 139.8 bits (351), Expect = 4.200e-30 Identity = 103/168 (61.31%), Postives = 123/168 (73.21%), Query Frame = 1
Query: 1 MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEES-IREPLLIMSSQDE 60
M+TMF ++K+LETIT K KTP KLQRSPKI+GYERED+ S + EPLL SSQ++
Sbjct: 1 MLTMFTLEKILETITNKPKTPP--KKLQRSPKIMGYEREDNLEISSELNEPLL-SSSQEK 60
Query: 61 INECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVV 120
I +CDQ K I KGV+NK+ +NN+RVKVLLTK EAAKLLAKCK +EG LDFKDVV
Sbjct: 61 I-DCDQ-GKIIIKGVNNKS------SNNIRVKVLLTKEEAAKLLAKCK-EEGVLDFKDVV 120
Query: 121 NQLMKLPPQRINV----VSSPSKDFDLETISEEEEEE-EEYDEYQKKN 163
+LMKLP QRINV ++ SKD +L TI EEEEE +EYD KKN
Sbjct: 121 KELMKLPAQRINVAPVITTNLSKDLELGTILEEEEEVCDEYD--NKKN 154
BLAST of Spo21362.1 vs. NCBI nr
Match: gi|870860607|gb|KMT11915.1| (hypothetical protein BVRB_5g098800 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 104.4 bits (259), Expect = 2.000e-19 Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 34 VGYEREDDYSEES-IREPLLIMSSQDEINECDQVMKNITKGVSNKNNNDNNINNNVRVKV 93
+GYERED+ S + EPLL SSQ++I +CDQ K I KGV+NK++N N+RVKV
Sbjct: 1 MGYEREDNLEISSELNEPLL-SSSQEKI-DCDQG-KIIIKGVNNKSSN------NIRVKV 60
Query: 94 LLTKAEAAKLLAKCKGDEGGLDFKDVVNQLMKLPPQRINV----VSSPSKDFDLETISEE 153
LLTK EAAKLLAKCK +EG LDFKDVV +LMKLP QRINV ++ SKD +L TI EE
Sbjct: 61 LLTKEEAAKLLAKCK-EEGVLDFKDVVKELMKLPAQRINVAPVITTNLSKDLELGTILEE 120
Query: 154 EEEE-EEYDEYQKKN 163
EEE +EYD KKN
Sbjct: 121 EEEVCDEYD--NKKN 123
BLAST of Spo21362.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R124_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118660 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 4.000e-80 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
Query: 1 MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI 60
MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI
Sbjct: 1 MVTMFAVDKLLETITKKYKTPTTRSKLQRSPKIVGYEREDDYSEESIREPLLIMSSQDEI 60
Query: 61 NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN 120
NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN
Sbjct: 61 NECDQVMKNITKGVSNKNNNDNNINNNVRVKVLLTKAEAAKLLAKCKGDEGGLDFKDVVN 120
Query: 121 QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV 164
QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV
Sbjct: 121 QLMKLPPQRINVVSSPSKDFDLETISEEEEEEEEYDEYQKKNV 163
BLAST of Spo21362.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CDT3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098800 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.400e-19 Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 34 VGYEREDDYSEES-IREPLLIMSSQDEINECDQVMKNITKGVSNKNNNDNNINNNVRVKV 93
+GYERED+ S + EPLL SSQ++I +CDQ K I KGV+NK++N N+RVKV
Sbjct: 1 MGYEREDNLEISSELNEPLL-SSSQEKI-DCDQG-KIIIKGVNNKSSN------NIRVKV 60
Query: 94 LLTKAEAAKLLAKCKGDEGGLDFKDVVNQLMKLPPQRINV----VSSPSKDFDLETISEE 153
LLTK EAAKLLAKCK +EG LDFKDVV +LMKLP QRINV ++ SKD +L TI EE
Sbjct: 61 LLTKEEAAKLLAKCK-EEGVLDFKDVVKELMKLPAQRINVAPVITTNLSKDLELGTILEE 120
Query: 154 EEEE-EEYDEYQKKN 163
EEE +EYD KKN
Sbjct: 121 EEEVCDEYD--NKKN 123
The following BLAST results are available for this feature:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006974 |
cellular response to DNA damage stimulus |
| biological_process |
GO:0006310 |
DNA recombination |
| biological_process |
GO:0009750 |
response to fructose |
| biological_process |
GO:0015996 |
chlorophyll catabolic process |
| biological_process |
GO:0006661 |
phosphatidylinositol biosynthetic process |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| biological_process |
GO:0016310 |
phosphorylation |
| biological_process |
GO:0006662 |
glycerol ether metabolic process |
| biological_process |
GO:0009653 |
anatomical structure morphogenesis |
| biological_process |
GO:0009816 |
defense response to bacterium, incompatible interaction |
| biological_process |
GO:0051276 |
chromosome organization |
| biological_process |
GO:0007059 |
chromosome segregation |
| biological_process |
GO:0003006 |
developmental process involved in reproduction |
| biological_process |
GO:0007127 |
meiosis I |
| biological_process |
GO:0043622 |
cortical microtubule organization |
| biological_process |
GO:0009791 |
post-embryonic development |
| biological_process |
GO:0070647 |
protein modification by small protein conjugation or removal |
| biological_process |
GO:0033043 |
regulation of organelle organization |
| biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
| biological_process |
GO:0022414 |
reproductive process |
| biological_process |
GO:0045454 |
cell redox homeostasis |
| biological_process |
GO:0006457 |
protein folding |
| biological_process |
GO:0016567 |
protein ubiquitination |
| biological_process |
GO:0009744 |
response to sucrose |
| biological_process |
GO:0005975 |
carbohydrate metabolic process |
| biological_process |
GO:0044262 |
cellular carbohydrate metabolic process |
| biological_process |
GO:0044260 |
cellular macromolecule metabolic process |
| biological_process |
GO:0006468 |
protein phosphorylation |
| biological_process |
GO:0009987 |
cellular process |
| biological_process |
GO:0010091 |
trichome branching |
| biological_process |
GO:0009864 |
induced systemic resistance, jasmonic acid mediated signaling pathway |
| biological_process |
GO:2000030 |
regulation of response to red or far red light |
| biological_process |
GO:0010046 |
response to mycotoxin |
| biological_process |
GO:0010224 |
response to UV-B |
| biological_process |
GO:0009832 |
plant-type cell wall biogenesis |
| biological_process |
GO:0030244 |
cellulose biosynthetic process |
| biological_process |
GO:0005982 |
starch metabolic process |
| biological_process |
GO:0005985 |
sucrose metabolic process |
| biological_process |
GO:0006011 |
UDP-glucose metabolic process |
| biological_process |
GO:0008152 |
metabolic process |
| biological_process |
GO:0009825 |
multidimensional cell growth |
| biological_process |
GO:0030001 |
metal ion transport |
| biological_process |
GO:0051013 |
microtubule severing |
| biological_process |
GO:0010200 |
response to chitin |
| biological_process |
GO:0009069 |
serine family amino acid metabolic process |
| biological_process |
GO:0046777 |
protein autophosphorylation |
| biological_process |
GO:0018108 |
peptidyl-tyrosine phosphorylation |
| biological_process |
GO:0030488 |
tRNA methylation |
| cellular_component |
GO:0005886 |
plasma membrane |
| cellular_component |
GO:0009507 |
chloroplast |
| cellular_component |
GO:0045298 |
tubulin complex |
| cellular_component |
GO:0009579 |
thylakoid |
| cellular_component |
GO:0031515 |
tRNA (m1A) methyltransferase complex |
| cellular_component |
GO:0005874 |
microtubule |
| cellular_component |
GO:0005737 |
cytoplasm |
| cellular_component |
GO:0005634 |
nucleus |
| cellular_component |
GO:0016020 |
membrane |
| cellular_component |
GO:0000785 |
chromatin |
| cellular_component |
GO:0005829 |
cytosol |
| molecular_function |
GO:0008017 |
microtubule binding |
| molecular_function |
GO:0009055 |
electron transfer activity |
| molecular_function |
GO:0003756 |
protein disulfide isomerase activity |
| molecular_function |
GO:0015035 |
protein disulfide oxidoreductase activity |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0046983 |
protein dimerization activity |
| molecular_function |
GO:0016429 |
tRNA (adenine-N1-)-methyltransferase activity |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004715 |
non-membrane spanning protein tyrosine kinase activity |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
| molecular_function |
GO:0019899 |
enzyme binding |
| molecular_function |
GO:0016874 |
ligase activity |
| molecular_function |
GO:0016760 |
cellulose synthase (UDP-forming) activity |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0030247 |
polysaccharide binding |
| molecular_function |
GO:0004842 |
ubiquitin-protein transferase activity |
| molecular_function |
GO:0004672 |
protein kinase activity |
| molecular_function |
GO:0003677 |
DNA binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
| molecular_function |
GO:0003682 |
chromatin binding |
| molecular_function |
GO:0016740 |
transferase activity |
| molecular_function |
GO:0016301 |
kinase activity |
| molecular_function |
GO:0016787 |
hydrolase activity |
| molecular_function |
GO:0016881 |
acid-amino acid ligase activity |
| molecular_function |
GO:0008568 |
microtubule-severing ATPase activity |
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