Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTACCTAAAACATCCTTAAAACAGTTTAACTTCCACCTTGTTTTCAGCTACCTTTTTTAACTGAAACAAACCGGCAAGCGTGTACTTTGCCCGGTTTCCTTTCCTCAACTTCTTCTTGTAAGTGTACGCACATATTCGTATTACGCACTGTCAGGCAGCTGAAACATGCAACTTACAACAAGAGAGTAACAACCATAACTGATATACGACTGTACGTCAGACAGTTCAGATAACAGATAACAGAAAACAGACACTGGCATTCTGCATATTTTCACTCTGAGGCAAAATTTTAAAAAAAGTAGGAAAAGGGAAACGGAAATGGAAAAAGGTTGTGGAAGTTACGAGCAAGAGTCGTTGGTGATGGAGCTAATCCAGGGGATAGCGCTAGCGAAACAGCTGAAAGCTCAAATGAGTCAAGAAGTATTACTTGCAGGTGACACTAAAGGAATGTTGGCAGAAAGGATACATTCTTGCTTGGAGAAAGCCCTTTTGATTATGAAATGGGGTGGTTCAATGTCAATGGAACAGTCTAACCAGAGTGTGGTGCCATCAACCACAATGCCTGAATCACCACTCTCGGTGATTGGAAGTCCTAGGAGTGAGGATTTTAACCCCGGGTTTCATGTTCAACAAGACGGCAGAAATATGTCAAGAAAGAGGTAAAACCGTAAAACTTTCTACCTGAGTTTTTAATGCATTTCCTGGTTAAAAAGAGAGTTTTTAACAGTGTTTTGGAATACTTGTTGCAGAAAGATGATGCCCATTTGGACAGACCAGGCTAAAGCAAGCTCTGAAAATGCGGGCGAAGGAGCACCTGAGGACGGGCATAGCTGGAGGAAGTATGGTCAGAAAGACATCCTAGGAGCCAAACATCCTAGGTAAACTTACTTCTTACTGTAGTTTTTACCAAGATACTTCATTTGTTTCACAATAGATGCATCATTTTGACTTTTTACACTATTTATATACTAACTTTAATCATCGATATCTCTAATTACATATTAATATAAATTACAAAAATTATATATTTTGAAAATATATATTGAGGTTAACCCAATAACAATTAAAAATACAAAATTTGTTTTTACATATTAGTAATAAATATGGTCAAAGTTAGTAGATGAATAGTGTTAAAAGTCAATATGATGCATCTATTAAGAAACGGAGGAAGTAGTACATAGTCAGTCCATCAAATCATCCATATTTATCATCAGACAAGGTTTTTATCAGAAATTTGTTAAACATGTCCAAAAAATATCCCGAGAGTCCTACAAAGCAAAGACATAGATTTGATTCTAATGTTGACCAACCCCATCTTTTTGTCTCTTTCTTTTTCCCTTTTTTTGTGTTTGCATCTACTCTATTTTCATCTAGAAAGTTGAAGGAAAACTCATGCAATCCTGTACGGAAAACAGCACTAAGAAGACTTTTTTCCAAAAGTCAACTACTAAAAATTTGACTATAGATGTATCTCCAGCTAGAAGGTTTGCAATGGAATCTCAGATCCTTAAAGCAATTAAAACAAAATTAAATAAGTAAACAAGAAAATTTAACACTCATATATAAAAAAATTCAACTTTCACAGGTCATCAAGAAGTAAAAAAAAAATAGATGGTAAAGAGCTAGACATAGAAGCTAACAGCAAGATTATTTCTGCATTTACAGAAGCTACTACAGATGTACTTACCGCAACATTCAAGGCTGCAGCGCTACCAAGCAAGTGCAACGAAATGATGAAGACCCCATGCTGTTCGACATCACCTATAGAGGGAGTCATACTTGTACACTGGCCCCACGTTCAAAGTCTGCACCTACATCACCACAAAAACAAGACCGCAACAAACAAAACAATTTTGCCATCACACAATACCAGCAGCAGCCTGATATGCTTCTAAATTTTCAGACAGGGCTAAGAGTTGACACTCAGAACTTAGAAAACCAGGAGACTGGATTTTTCTTTCCTACACAAGAATTTGGACATGAAAATCATGCCTTTACGCCATCAACACTCAACCACAGTCACCCTAGTAACAGTTTTCCTCAGTCGTTCATACAATCACCGGCCACCTCGGAATCAACCTACTTCTCCACATCACCCTGCAAGACGAGCACCTTTGGAGGTTTTAACTATGGACAGCATTTCGAATCAGACATCACAGATATAATTTCAGCCACTACTTCAGGAACCAACTCCCCAATAATAGGCATTGATTATCCGTTGGAACAATGGGAAGGTTTTCTGTGTGATAACCAAGCATTTCCCACCAGCTTCTCTCAAGCTAAAGAATAGTCCAAACTCCAACATGAAACCCCCACAGATGGTTACTTGGCTGTTATTGGGGAATTTTTCAGTTCAACATTTTATCTAATCAGACAAGACAAGCAGGGAGGATAAACAATAGAATCATTACTCAAGTGTAAATTATCAGAATAGGTAACAAAATGGGGATACTACCTAGTATAACAAAATAGAAGGAAGCTTGTGCTAGGTTTATAAGGAGTCGCTGGTACAAGCAAAGAGCTTCATGCTAGTTGACAGCAGTTTTACTATTCATTTTATTCTTTCCCCTTGTAGCCTAAAGTCTTTAGTTAACTCCAACAACCCTCCAATCAATAATGAAAACATAGTGGATCTTAATCTGAAATCAAAGATTTGTTACTCCGTAGTTAAACAATATTGTAAGCTTATAACTATTTTTGGAAGGAGAGAGTAGTTGTTTAAGGTTGATGATTTGTTAATTATTATATTGACATTTCCTCTTTCCCTTTTAGTTGCAACGTTCTATTTTGGGACGTTTCTTTTTAGTTGCAACATTCCTACTTTTGACAACTTTACTTACTTGACTCTCAGCAAAC CTTACCTAAAACATCCTTAAAACAGTTTAACTTCCACCTTGTTTTCAGCTACCTTTTTTAACTGAAACAAACCGGCAAGCGTGTACTTTGCCCGGTTTCCTTTCCTCAACTTCTTCTTGTAAGTGTACGCACATATTCGTATTACGCACTGTCAGGCAGCTGAAACATGCAACTTACAACAAGAGAGTAACAACCATAACTGATATACGACTGTACGTCAGACAGTTCAGATAACAGATAACAGAAAACAGACACTGGCATTCTGCATATTTTCACTCTGAGGCAAAATTTTAAAAAAAGTAGGAAAAGGGAAACGGAAATGGAAAAAGGTTGTGGAAGTTACGAGCAAGAGTCGTTGGTGATGGAGCTAATCCAGGGGATAGCGCTAGCGAAACAGCTGAAAGCTCAAATGAGTCAAGAAGTATTACTTGCAGGTGACACTAAAGGAATGTTGGCAGAAAGGATACATTCTTGCTTGGAGAAAGCCCTTTTGATTATGAAATGGGGTGGTTCAATGTCAATGGAACAGTCTAACCAGAGTGTGGTGCCATCAACCACAATGCCTGAATCACCACTCTCGGTGATTGGAAGTCCTAGGAGTGAGGATTTTAACCCCGGGTTTCATGTTCAACAAGACGGCAGAAATATGTCAAGAAAGAGAAAGATGATGCCCATTTGGACAGACCAGGCTAAAGCAAGCTCTGAAAATGCGGGCGAAGGAGCACCTGAGGACGGGCATAGCTGGAGGAAGTATGGTCAGAAAGACATCCTAGGAGCCAAACATCCTAGAAGCTACTACAGATGTACTTACCGCAACATTCAAGGCTGCAGCGCTACCAAGCAAGTGCAACGAAATGATGAAGACCCCATGCTGTTCGACATCACCTATAGAGGGAGTCATACTTGTACACTGGCCCCACGTTCAAAGTCTGCACCTACATCACCACAAAAACAAGACCGCAACAAACAAAACAATTTTGCCATCACACAATACCAGCAGCAGCCTGATATGCTTCTAAATTTTCAGACAGGGCTAAGAGTTGACACTCAGAACTTAGAAAACCAGGAGACTGGATTTTTCTTTCCTACACAAGAATTTGGACATGAAAATCATGCCTTTACGCCATCAACACTCAACCACAGTCACCCTAGTAACAGTTTTCCTCAGTCGTTCATACAATCACCGGCCACCTCGGAATCAACCTACTTCTCCACATCACCCTGCAAGACGAGCACCTTTGGAGGTTTTAACTATGGACAGCATTTCGAATCAGACATCACAGATATAATTTCAGCCACTACTTCAGGAACCAACTCCCCAATAATAGGCATTGATTATCCGTTGGAACAATGGGAAGGTTTTCTGTGTGATAACCAAGCATTTCCCACCAGCTTCTCTCAAGCTAAAGAATAGTCCAAACTCCAACATGAAACCCCCACAGATGGTTACTTGGCTGTTATTGGGGAATTTTTCAGTTCAACATTTTATCTAATCAGACAAGACAAGCAGGGAGGATAAACAATAGAATCATTACTCAAGTGTAAATTATCAGAATAGGTAACAAAATGGGGATACTACCTAGTATAACAAAATAGAAGGAAGCTTGTGCTAGGTTTATAAGGAGTCGCTGGTACAAGCAAAGAGCTTCATGCTAGTTGACAGCAGTTTTACTATTCATTTTATTCTTTCCCCTTGTAGCCTAAAGTCTTTAGTTAACTCCAACAACCCTCCAATCAATAATGAAAACATAGTGGATCTTAATCTGAAATCAAAGATTTGTTACTCCGTAGTTAAACAATATTGTAAGCTTATAACTATTTTTGGAAGGAGAGAGTAGTTGTTTAAGGTTGATGATTTGTTAATTATTATATTGACATTTCCTCTTTCCCTTTTAGTTGCAACGTTCTATTTTGGGACGTTTCTTTTTAGTTGCAACATTCCTACTTTTGACAACTTTACTTACTTGACTCTCAGCAAAC ATGGAAAAAGGTTGTGGAAGTTACGAGCAAGAGTCGTTGGTGATGGAGCTAATCCAGGGGATAGCGCTAGCGAAACAGCTGAAAGCTCAAATGAGTCAAGAAGTATTACTTGCAGGTGACACTAAAGGAATGTTGGCAGAAAGGATACATTCTTGCTTGGAGAAAGCCCTTTTGATTATGAAATGGGGTGGTTCAATGTCAATGGAACAGTCTAACCAGAGTGTGGTGCCATCAACCACAATGCCTGAATCACCACTCTCGGTGATTGGAAGTCCTAGGAGTGAGGATTTTAACCCCGGGTTTCATGTTCAACAAGACGGCAGAAATATGTCAAGAAAGAGAAAGATGATGCCCATTTGGACAGACCAGGCTAAAGCAAGCTCTGAAAATGCGGGCGAAGGAGCACCTGAGGACGGGCATAGCTGGAGGAAGTATGGTCAGAAAGACATCCTAGGAGCCAAACATCCTAGAAGCTACTACAGATGTACTTACCGCAACATTCAAGGCTGCAGCGCTACCAAGCAAGTGCAACGAAATGATGAAGACCCCATGCTGTTCGACATCACCTATAGAGGGAGTCATACTTGTACACTGGCCCCACGTTCAAAGTCTGCACCTACATCACCACAAAAACAAGACCGCAACAAACAAAACAATTTTGCCATCACACAATACCAGCAGCAGCCTGATATGCTTCTAAATTTTCAGACAGGGCTAAGAGTTGACACTCAGAACTTAGAAAACCAGGAGACTGGATTTTTCTTTCCTACACAAGAATTTGGACATGAAAATCATGCCTTTACGCCATCAACACTCAACCACAGTCACCCTAGTAACAGTTTTCCTCAGTCGTTCATACAATCACCGGCCACCTCGGAATCAACCTACTTCTCCACATCACCCTGCAAGACGAGCACCTTTGGAGGTTTTAACTATGGACAGCATTTCGAATCAGACATCACAGATATAATTTCAGCCACTACTTCAGGAACCAACTCCCCAATAATAGGCATTGATTATCCGTTGGAACAATGGGAAGGTTTTCTGTGTGATAACCAAGCATTTCCCACCAGCTTCTCTCAAGCTAAAGAATAG MEKGCGSYEQESLVMELIQGIALAKQLKAQMSQEVLLAGDTKGMLAERIHSCLEKALLIMKWGGSMSMEQSNQSVVPSTTMPESPLSVIGSPRSEDFNPGFHVQQDGRNMSRKRKMMPIWTDQAKASSENAGEGAPEDGHSWRKYGQKDILGAKHPRSYYRCTYRNIQGCSATKQVQRNDEDPMLFDITYRGSHTCTLAPRSKSAPTSPQKQDRNKQNNFAITQYQQQPDMLLNFQTGLRVDTQNLENQETGFFFPTQEFGHENHAFTPSTLNHSHPSNSFPQSFIQSPATSESTYFSTSPCKTSTFGGFNYGQHFESDITDIISATTSGTNSPIIGIDYPLEQWEGFLCDNQAFPTSFSQAKE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21374.1 vs. NCBI nr
Match: gi|902221282|gb|KNA18877.1| (hypothetical protein SOVF_066780 [Spinacia oleracea]) HSP 1 Score: 737.6 bits (1903), Expect = 1.000e-209 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 1
BLAST of Spo21374.1 vs. NCBI nr
Match: gi|731330788|ref|XP_010676319.1| (PREDICTED: probable WRKY transcription factor 41 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 503.4 bits (1295), Expect = 3.200e-139 Identity = 264/369 (71.54%), Postives = 298/369 (80.76%), Query Frame = 1
BLAST of Spo21374.1 vs. NCBI nr
Match: gi|870860641|gb|KMT11949.1| (hypothetical protein BVRB_5g099120 isoform B [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 364.4 bits (934), Expect = 2.300e-97 Identity = 212/369 (57.45%), Postives = 246/369 (66.67%), Query Frame = 1
BLAST of Spo21374.1 vs. NCBI nr
Match: gi|743825422|ref|XP_011022522.1| (PREDICTED: probable WRKY transcription factor 41 [Populus euphratica]) HSP 1 Score: 295.0 bits (754), Expect = 1.700e-76 Identity = 170/348 (48.85%), Postives = 227/348 (65.23%), Query Frame = 1
BLAST of Spo21374.1 vs. NCBI nr
Match: gi|767012153|gb|AJT43313.1| (WRKY protein 33 [Gossypium hirsutum]) HSP 1 Score: 291.2 bits (744), Expect = 2.500e-75 Identity = 173/360 (48.06%), Postives = 238/360 (66.11%), Query Frame = 1
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJ40_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066780 PE=4 SV=1) HSP 1 Score: 737.6 bits (1903), Expect = 7.100e-210 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 1
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIN8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g099120 PE=4 SV=1) HSP 1 Score: 503.4 bits (1295), Expect = 2.200e-139 Identity = 264/369 (71.54%), Postives = 298/369 (80.76%), Query Frame = 1
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CIN1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g099120 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.600e-97 Identity = 212/369 (57.45%), Postives = 246/369 (66.67%), Query Frame = 1
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Match: A0A0U1Z9M8_GOSHI (WRKY protein 33 OS=Gossypium hirsutum GN=WRKY33 PE=2 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 1.800e-75 Identity = 173/360 (48.06%), Postives = 238/360 (66.11%), Query Frame = 1
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TCI6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G253300 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 3.000e-75 Identity = 173/361 (47.92%), Postives = 235/361 (65.10%), Query Frame = 1
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.300e-44 Identity = 117/287 (40.77%), Postives = 168/287 (58.54%), Query Frame = 1
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2) HSP 1 Score: 164.1 bits (414), Expect = 2.900e-39 Identity = 116/300 (38.67%), Postives = 164/300 (54.67%), Query Frame = 1
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 7.400e-27 Identity = 111/329 (33.74%), Postives = 153/329 (46.50%), Query Frame = 1
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.700e-21 Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 1
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.700e-20 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Match: AT4G23810.1 (WRKY family transcription factor) HSP 1 Score: 181.8 bits (460), Expect = 7.600e-46 Identity = 117/287 (40.77%), Postives = 168/287 (58.54%), Query Frame = 1
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Match: AT4G11070.1 (WRKY family transcription factor) HSP 1 Score: 164.1 bits (414), Expect = 1.600e-40 Identity = 116/300 (38.67%), Postives = 164/300 (54.67%), Query Frame = 1
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Match: AT5G24110.1 (WRKY DNA-binding protein 30) HSP 1 Score: 122.9 bits (307), Expect = 4.200e-28 Identity = 111/329 (33.74%), Postives = 153/329 (46.50%), Query Frame = 1
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Match: AT2G46400.1 (WRKY DNA-binding protein 46) HSP 1 Score: 103.6 bits (257), Expect = 2.600e-22 Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 1
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Match: AT2G40740.1 (WRKY DNA-binding protein 55) HSP 1 Score: 99.8 bits (247), Expect = 3.800e-21 Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21374.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21374.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21374.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21374.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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