Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGTATGGAAACTTGCAAGGTTAATAGATTCAAAGGAGGGGGAGGAGAAGAGAGCGGGAAATCGAAAGAAGAAAACGGGGGAATTGAAATGATTTGTAAAGAAGGAGACTTTGTGAAGAACGTTGCGAGTAATAAAAATGGTTTAAGAGTAAAAATGGTTTTGACTAAAGAAGAGTTACAATGGTTGATGATGCAGTTGAGTAACAGAGATGGCAATGGAGGAAAGAGGATTGAAGATGTTTTAGGAGAGCTTGAGAAGGGAAGAAAGAAAGTTTCAGGTCATTCTTGGAAACCTTCTCTTGATAGTATAACTGAAATCCCTGAAGTTGTTGAGATGAATAGATGA ATGGGAAATTGTATGGAAACTTGCAAGGTTAATAGATTCAAAGGAGGGGGAGGAGAAGAGAGCGGGAAATCGAAAGAAGAAAACGGGGGAATTGAAATGATTTGTAAAGAAGGAGACTTTGTGAAGAACGTTGCGAGTAATAAAAATGGTTTAAGAGTAAAAATGGTTTTGACTAAAGAAGAGTTACAATGGTTGATGATGCAGTTGAGTAACAGAGATGGCAATGGAGGAAAGAGGATTGAAGATGTTTTAGGAGAGCTTGAGAAGGGAAGAAAGAAAGTTTCAGGTCATTCTTGGAAACCTTCTCTTGATAGTATAACTGAAATCCCTGAAGTTGTTGAGATGAATAGATGA ATGGGAAATTGTATGGAAACTTGCAAGGTTAATAGATTCAAAGGAGGGGGAGGAGAAGAGAGCGGGAAATCGAAAGAAGAAAACGGGGGAATTGAAATGATTTGTAAAGAAGGAGACTTTGTGAAGAACGTTGCGAGTAATAAAAATGGTTTAAGAGTAAAAATGGTTTTGACTAAAGAAGAGTTACAATGGTTGATGATGCAGTTGAGTAACAGAGATGGCAATGGAGGAAAGAGGATTGAAGATGTTTTAGGAGAGCTTGAGAAGGGAAGAAAGAAAGTTTCAGGTCATTCTTGGAAACCTTCTCTTGATAGTATAACTGAAATCCCTGAAGTTGTTGAGATGAATAGATGA MGNCMETCKVNRFKGGGGEESGKSKEENGGIEMICKEGDFVKNVASNKNGLRVKMVLTKEELQWLMMQLSNRDGNGGKRIEDVLGELEKGRKKVSGHSWKPSLDSITEIPEVVEMNR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21398.1 vs. NCBI nr
Match: gi|902196818|gb|KNA13222.1| (hypothetical protein SOVF_118670 [Spinacia oleracea]) HSP 1 Score: 239.2 bits (609), Expect = 3.600e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1
BLAST of Spo21398.1 vs. NCBI nr
Match: gi|870860608|gb|KMT11916.1| (hypothetical protein BVRB_5g098810 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 153.7 bits (387), Expect = 2.000e-34 Identity = 84/119 (70.59%), Postives = 95/119 (79.83%), Query Frame = 1
BLAST of Spo21398.1 vs. NCBI nr
Match: gi|703088078|ref|XP_010093440.1| (hypothetical protein L484_001388 [Morus notabilis]) HSP 1 Score: 102.8 bits (255), Expect = 4.100e-19 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1
BLAST of Spo21398.1 vs. NCBI nr
Match: gi|1009156774|ref|XP_015896418.1| (PREDICTED: uncharacterized protein LOC107430133 [Ziziphus jujuba]) HSP 1 Score: 99.8 bits (247), Expect = 3.500e-18 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 1
BLAST of Spo21398.1 vs. NCBI nr
Match: gi|388517277|gb|AFK46700.1| (unknown [Lotus japonicus]) HSP 1 Score: 99.0 bits (245), Expect = 5.900e-18 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R350_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118670 PE=4 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 2.500e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F7J1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g098810 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.400e-34 Identity = 84/119 (70.59%), Postives = 95/119 (79.83%), Query Frame = 1
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Match: W9RFV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001388 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.800e-19 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Match: I3T2F8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.100e-18 Identity = 58/119 (48.74%), Postives = 81/119 (68.07%), Query Frame = 1
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Match: F6HU23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g01450 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.000e-16 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1
BLAST of Spo21398.1 vs. TAIR (Arabidopsis)
Match: AT1G64405.1 (unknown protein) HSP 1 Score: 58.5 bits (140), Expect = 3.100e-9 Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21398.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21398.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21398.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo21398.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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