Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAAAGTGGCATTTTATATTCCAAATCAAGAAAATACACACAAAAAGGGAGAAAATATTCGTCACGTCCTTCATCCTGAAGCATGAATAGTGAAAATATATTCCCAATTTCACCACTATATAAGCACACCATGGACCATGCTAATTTGTATCTCACTAAAGCAATAATAGTAATCCCCTAAGAAAACCAACAGCAATGGCATACAACCACCCTTATGGAAACAACTACTACGGGGTTGAGAGAGAGGTCATCCGTGATGGTCCATGCGGTGCCTACGCTGCTGACTACAGGGTTGATGAATATGGGAACCGCATCTACCACCACCGCAATGGATTGGGAAATGACGTAACTGAGATTGTGACTGATGTCATCCCTGGCCACCTTAACCACCACCACCACCACCCCCGAAACGGTTTGGGAAATGTTGTAACTGAGGTTGTGACCGATGTTATCCCTGGCCACTACCACCACCAACGCCACCACCCTGGGTTCATTCAGAGGAGGGAAGAGTGCATTGTTGACAGTGCCTATGACCCATACAGGAGGGTATGTGTTTTTTTTAGCTTCTTTTTTTTAAGTCTTTAGTTTTTGGTTTCAACTAGATTTTTCTGACACCCAACAATTAACTAAAGGTATGAAACCATGAAGTATTTCATTTTATTTTTGGCAAGTAAGAAATTTTATTAAAATAAAACAAGCACAAACACCATACATATACAAGCACAAACAAGGACCTCTCCTACCTCAAGCCTCAAACATACCAACTTAGCCAACAGGCCTAACTAACCCAAACAGAACAAAAGTACCATACTACCAATCACTCATTTTATTATCGACTCAAACCATTCCTTGTCATGCAGGGGGACTTTCTTACTCATCATACTTCTTATCCTTGAGCTCACAATCCCCTTAACCCCTTTTAGCTACCGTGTTCATGTTAGTTTTATTATAAGATATTCAAAAGTAGCTTAAGATAATTTGTTTTCCCTCCTGTATCATAATTCTATCAGCTAACTTGCCTTCCATATTTTTTGTACTGCAGATGTACTGAGGGTTAGTACTTGCATGATGCAGAGAATTGACAGCAACCATGGTATTATTAGTATAATAAAAATGTGCTCTTAGCCTCTAAGCATAGGCTAGCTAGTTGTTACGACTTACGGGCAAGGATTCAATACGATGTGTGCTTTTCTATATTGTACTGTAATCATATTTGGTTTGGTTATGTATTTCGGTTTTCTTATGAAGGTATATATGGTTGTTTTCTTTTTAGAAAAAGAGGATTATGTCCTGTCTCTAGAATATGAAACTGCACTTATACTAGCTTTTATATCTCAACTCTCAAGCAATATACAAGGTTATAAATATGAAAACGGTAGAGAACTAACATTCTGCACCTCAAAAAGCACTAGCTTCTGAAACGATACCAGTTCTTGACACAACAGCAAGTCTCTTCTCGATCTATTGCCAAGTCCAGATAGGACATACTGCATCCAACCTGCACCCTAAATTATTTTTGAAATTCTACTTACGGAGAGATCTGAAGCAAATGGATTTTGAGAATTTGTTGGTATTAAGAGAGAACCAATGCTGAATCAATACTCAGTCATTTCTATAGAAATGACAAAAGCGGAGAGGAAAGAAGCCTAATTTGGCCAGCTAATTATAATTACAGATATAATACCTAAGAGCCTATGTCCTGCACATGATATTGGATATAAGGATAGACTACGTACTGAGATCCAAAGTGTTTGATTAGCAAAAATGGAAGCCAGGCACAATAAGACTGTAGTTAAATATCAGTTAAATTTTCTACGGAACTTTTGTGGGAATTATCAGGCTGGAAAAATGATGCCAAACCTGGTTTAGAGGATGGATAACAAGAAGTCTGTTAACAATCCTTTCTTCTATTTTCATAATCTGCAAATTGTGGAGAGATAATTAGAATTAATTTGAATAACAGCTGCAGTTTCTAT TCAAAGTGGCATTTTATATTCCAAATCAAGAAAATACACACAAAAAGGGAGAAAATATTCGTCACGTCCTTCATCCTGAAGCATGAATAGTGAAAATATATTCCCAATTTCACCACTATATAAGCACACCATGGACCATGCTAATTTGTATCTCACTAAAGCAATAATAGTAATCCCCTAAGAAAACCAACAGCAATGGCATACAACCACCCTTATGGAAACAACTACTACGGGGTTGAGAGAGAGGTCATCCGTGATGGTCCATGCGGTGCCTACGCTGCTGACTACAGGGTTGATGAATATGGGAACCGCATCTACCACCACCGCAATGGATTGGGAAATGACGTAACTGAGATTGTGACTGATGTCATCCCTGGCCACCTTAACCACCACCACCACCACCCCCGAAACGGTTTGGGAAATGTTGTAACTGAGGTTGTGACCGATGTTATCCCTGGCCACTACCACCACCAACGCCACCACCCTGGGTTCATTCAGAGGAGGGAAGAGTGCATTGTTGACAGTGCCTATGACCCATACAGGAGGATGTACTGAGGGTTAGTACTTGCATGATGCAGAGAATTGACAGCAACCATGGTATTATTAGTATAATAAAAATGTGCTCTTAGCCTCTAAGCATAGGCTAGCTAGTTGTTACGACTTACGGGCAAGGATTCAATACGATGTGTGCTTTTCTATATTGTACTGTAATCATATTTGGTTTGGTTATGTATTTCGGTTTTCTTATGAAGGTATATATGGTTGTTTTCTTTTTAGAAAAAGAGGATTATGTCCTGTCTCTAGAATATGAAACTGCACTTATACTAGCTTTTATATCTCAACTCTCAAGCAATATACAAGGTTATAAATATGAAAACGGTAGAGAACTAACATTCTGCACCTCAAAAAGCACTAGCTTCTGAAACGATACCAGTTCTTGACACAACAGCAAGTCTCTTCTCGATCTATTGCCAAGTCCAGATAGGACATACTGCATCCAACCTGCACCCTAAATTATTTTTGAAATTCTACTTACGGAGAGATCTGAAGCAAATGGATTTTGAGAATTTGTTGGTATTAAGAGAGAACCAATGCTGAATCAATACTCAGTCATTTCTATAGAAATGACAAAAGCGGAGAGGAAAGAAGCCTAATTTGGCCAGCTAATTATAATTACAGATATAATACCTAAGAGCCTATGTCCTGCACATGATATTGGATATAAGGATAGACTACGTACTGAGATCCAAAGTGTTTGATTAGCAAAAATGGAAGCCAGGCACAATAAGACTGTAGTTAAATATCAGTTAAATTTTCTACGGAACTTTTGTGGGAATTATCAGGCTGGAAAAATGATGCCAAACCTGGTTTAGAGGATGGATAACAAGAAGTCTGTTAACAATCCTTTCTTCTATTTTCATAATCTGCAAATTGTGGAGAGATAATTAGAATTAATTTGAATAACAGCTGCAGTTTCTAT ATGGCATACAACCACCCTTATGGAAACAACTACTACGGGGTTGAGAGAGAGGTCATCCGTGATGGTCCATGCGGTGCCTACGCTGCTGACTACAGGGTTGATGAATATGGGAACCGCATCTACCACCACCGCAATGGATTGGGAAATGACGTAACTGAGATTGTGACTGATGTCATCCCTGGCCACCTTAACCACCACCACCACCACCCCCGAAACGGTTTGGGAAATGTTGTAACTGAGGTTGTGACCGATGTTATCCCTGGCCACTACCACCACCAACGCCACCACCCTGGGTTCATTCAGAGGAGGGAAGAGTGCATTGTTGACAGTGCCTATGACCCATACAGGAGGATGTACTGA MAYNHPYGNNYYGVEREVIRDGPCGAYAADYRVDEYGNRIYHHRNGLGNDVTEIVTDVIPGHLNHHHHHPRNGLGNVVTEVVTDVIPGHYHHQRHHPGFIQRREECIVDSAYDPYRRMY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21412.1 vs. NCBI nr
Match: gi|902221276|gb|KNA18871.1| (hypothetical protein SOVF_066720 [Spinacia oleracea]) HSP 1 Score: 269.2 bits (687), Expect = 3.300e-69 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Spo21412.1 vs. NCBI nr
Match: gi|902221279|gb|KNA18874.1| (hypothetical protein SOVF_066750 [Spinacia oleracea]) HSP 1 Score: 147.1 bits (370), Expect = 1.900e-32 Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 1
BLAST of Spo21412.1 vs. NCBI nr
Match: gi|731330786|ref|XP_010676318.1| (PREDICTED: uncharacterized protein LOC104892176 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 131.3 bits (329), Expect = 1.100e-27 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 1
BLAST of Spo21412.1 vs. NCBI nr
Match: gi|31879430|dbj|BAC77693.1| (salt-induced hydrophilic protein [Atriplex nummularia]) HSP 1 Score: 124.4 bits (311), Expect = 1.300e-25 Identity = 68/120 (56.67%), Postives = 76/120 (63.33%), Query Frame = 1
BLAST of Spo21412.1 vs. NCBI nr
Match: gi|902221275|gb|KNA18870.1| (hypothetical protein SOVF_066710 [Spinacia oleracea]) HSP 1 Score: 118.2 bits (295), Expect = 9.500e-24 Identity = 64/125 (51.20%), Postives = 77/125 (61.60%), Query Frame = 1
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RH83_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066720 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 2.300e-69 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIW4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066750 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.300e-32 Identity = 74/104 (71.15%), Postives = 80/104 (76.92%), Query Frame = 1
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F7N2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g099100 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 7.600e-28 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 1
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Match: Q7XZR4_ATRNU (Salt-induced hydrophilic protein OS=Atriplex nummularia GN=AnSIHP1 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 9.300e-26 Identity = 68/120 (56.67%), Postives = 76/120 (63.33%), Query Frame = 1
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHB3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_066710 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.600e-24 Identity = 64/125 (51.20%), Postives = 77/125 (61.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21412.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21412.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21412.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo21412.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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