Spo21578 (gene) | SpinachBase

Overview


Name	Spo21578
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr2 : 55496994 .. 55498031 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCTTGCATTAGCAAATGCAAAACCAAGAAAAACTCCAAGAAAAAACAATCAAAACAAGAAGAATGCAACAAATGCCAATGCAATGAGAAAAATAACAATGTTTGTACAAAAACTCCTTTAGTAGTACAAGATAAGCTAATTATTTCACAAAAAAACATTTCTTCTTCTTGTTCTCCTCCTAAAACATCCTTAATTTCTCCATTATCTCCTATAAACTCTTCATCATCCACAAAGTCGTCTTGTGCCATGAATTCTTATTATCCTACTACTACAACCACGAGCACGAGCTCGACTATGAGCTCGTGTTCTTTACTCTCCTCGGCATCCTCTTTTACGTCAGCCTCCTCCTCGGCCCCGAGCTCGAAGCTAGACCCATCTTTCACAAATGACTTCCTTTGGTCTTGTGTTAAGGAAAATCCTCAATTACTTAATGGTAATGGTGATTATCTTCCAATAATTAAGGTTGCAAATCCTAGAAGGAACTCTCTACCTATAAGGTGTCAAACTAATGGTAAAAAGCCCAATAGGCCCATTAAGGATTTCTCCGGGCCGATGCAAAGTCTACAAAGGGTTGTTGTAAGATCGGCCCCACAAAAGAGGCCTCGTTGTAACTCACCAAGTAATTTGACCCGACAAAAGAGCTTTCGTCGAGAGCCCGAGGTTGAACCCGCCCGGCCCGTTTCGAGAAGTGGTAGGGACTTAAGGCCTATGTCACCTTCCTCTAGTAAAAGGTTTATTGGAGAAGGACATAATAATCTAGGGAGAAATTTGACATCATCTATGAGAAGAGAGAATTGTTATGTTAGGCCTCCTAGTCCAAGTAATAAAGGGTATAATGGTAATTCGAGGCGTAACGGCCGATGCAACAATTTGTTGGTAAAAAAAGAAGATGAAGATATGATTAATGGGGTTAATTCAAAAATTAAGGAAATGAAAATGGGAGGTTTAGTTTCTAGCCAAGATATGGATATGATGCCCATTGAAGATGCTGAAAATCCACATATTGCTTTGGATTGTTTTATTTTCCTGTAA

mRNA sequence

ATGGGTGCTTGCATTAGCAAATGCAAAACCAAGAAAAACTCCAAGAAAAAACAATCAAAACAAGAAGAATGCAACAAATGCCAATGCAATGAGAAAAATAACAATGTTTGTACAAAAACTCCTTTAGTAGTACAAGATAAGCTAATTATTTCACAAAAAAACATTTCTTCTTCTTGTTCTCCTCCTAAAACATCCTTAATTTCTCCATTATCTCCTATAAACTCTTCATCATCCACAAAGTCGTCTTGTGCCATGAATTCTTATTATCCTACTACTACAACCACGAGCACGAGCTCGACTATGAGCTCGTGTTCTTTACTCTCCTCGGCATCCTCTTTTACGTCAGCCTCCTCCTCGGCCCCGAGCTCGAAGCTAGACCCATCTTTCACAAATGACTTCCTTTGGTCTTGTGTTAAGGAAAATCCTCAATTACTTAATGGTAATGGTGATTATCTTCCAATAATTAAGGTTGCAAATCCTAGAAGGAACTCTCTACCTATAAGGTGTCAAACTAATGGTAAAAAGCCCAATAGGCCCATTAAGGATTTCTCCGGGCCGATGCAAAGTCTACAAAGGGTTGTTGTAAGATCGGCCCCACAAAAGAGGCCTCGTTGTAACTCACCAAGTAATTTGACCCGACAAAAGAGCTTTCGTCGAGAGCCCGAGGTTGAACCCGCCCGGCCCGTTTCGAGAAGTGGTAGGGACTTAAGGCCTATGTCACCTTCCTCTAGTAAAAGGTTTATTGGAGAAGGACATAATAATCTAGGGAGAAATTTGACATCATCTATGAGAAGAGAGAATTGTTATGTTAGGCCTCCTAGTCCAAGTAATAAAGGGTATAATGGTAATTCGAGGCGTAACGGCCGATGCAACAATTTGTTGGTAAAAAAAGAAGATGAAGATATGATTAATGGGGTTAATTCAAAAATTAAGGAAATGAAAATGGGAGGTTTAGTTTCTAGCCAAGATATGGATATGATGCCCATTGAAGATGCTGAAAATCCACATATTGCTTTGGATTGTTTTATTTTCCTGTAA

Coding sequence (CDS)

ATGGGTGCTTGCATTAGCAAATGCAAAACCAAGAAAAACTCCAAGAAAAAACAATCAAAACAAGAAGAATGCAACAAATGCCAATGCAATGAGAAAAATAACAATGTTTGTACAAAAACTCCTTTAGTAGTACAAGATAAGCTAATTATTTCACAAAAAAACATTTCTTCTTCTTGTTCTCCTCCTAAAACATCCTTAATTTCTCCATTATCTCCTATAAACTCTTCATCATCCACAAAGTCGTCTTGTGCCATGAATTCTTATTATCCTACTACTACAACCACGAGCACGAGCTCGACTATGAGCTCGTGTTCTTTACTCTCCTCGGCATCCTCTTTTACGTCAGCCTCCTCCTCGGCCCCGAGCTCGAAGCTAGACCCATCTTTCACAAATGACTTCCTTTGGTCTTGTGTTAAGGAAAATCCTCAATTACTTAATGGTAATGGTGATTATCTTCCAATAATTAAGGTTGCAAATCCTAGAAGGAACTCTCTACCTATAAGGTGTCAAACTAATGGTAAAAAGCCCAATAGGCCCATTAAGGATTTCTCCGGGCCGATGCAAAGTCTACAAAGGGTTGTTGTAAGATCGGCCCCACAAAAGAGGCCTCGTTGTAACTCACCAAGTAATTTGACCCGACAAAAGAGCTTTCGTCGAGAGCCCGAGGTTGAACCCGCCCGGCCCGTTTCGAGAAGTGGTAGGGACTTAAGGCCTATGTCACCTTCCTCTAGTAAAAGGTTTATTGGAGAAGGACATAATAATCTAGGGAGAAATTTGACATCATCTATGAGAAGAGAGAATTGTTATGTTAGGCCTCCTAGTCCAAGTAATAAAGGGTATAATGGTAATTCGAGGCGTAACGGCCGATGCAACAATTTGTTGGTAAAAAAAGAAGATGAAGATATGATTAATGGGGTTAATTCAAAAATTAAGGAAATGAAAATGGGAGGTTTAGTTTCTAGCCAAGATATGGATATGATGCCCATTGAAGATGCTGAAAATCCACATATTGCTTTGGATTGTTTTATTTTCCTGTAA

Protein sequence

MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCSPPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSFTSASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKKPNRPIKDFSGPMQSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSRSGRDLRPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSPSNKGYNGNSRRNGRCNNLLVKKEDEDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIFL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21578.1	Spo21578.1	mRNA

Homology

[Close]

BLAST of Spo21578.1 vs. NCBI nr
Match: gi|870868860|gb|KMT19656.1| (hypothetical protein BVRB_1g010430 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 409.8 bits (1052), Expect = 4.600e-111
Identity = 248/351 (70.66%), Postives = 283/351 (80.63%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG+CISKCK KK SKK Q KQEECN CQC EKN  + + TPLV QDKL+ISQ  ISS   
Sbjct: 1   MGSCISKCKPKKTSKKNQQKQEECN-CQCIEKNITI-SSTPLV-QDKLVISQLPISS--- 60

Query: 61  PPKT--SLISPLSPINSSSSTKSSCAMNSYYPTTTT---TSTSSTMSSCSLLSSASSFTS 120
           PP T  ++ISP SP+ SSSS KSSC  NS YPTT+T   TSTS++ SSCS+LSSASSF S
Sbjct: 61  PPTTKCTIISPSSPLTSSSSAKSSCT-NSNYPTTSTSTSTSTSASSSSCSVLSSASSFAS 120

Query: 121 ASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKK 180
           A+SS  SSK D +F+ND+LWSCVKENPQ+LN +  YLP+IKV NPRRNSLPIRCQ NGKK
Sbjct: 121 AASSM-SSKFDQAFSNDYLWSCVKENPQILNSH--YLPMIKVLNPRRNSLPIRCQNNGKK 180

Query: 181 PNRPIKDFSGPMQSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSRSGRD 240
           PNR  ++F GP  S QRVVVRSA QKRPRCNSPSNLTRQKSFR EPEVEP RP+SRSGRD
Sbjct: 181 PNR-YREFPGP--SPQRVVVRSAAQKRPRCNSPSNLTRQKSFRGEPEVEPIRPISRSGRD 240

Query: 241 LRPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSPSNKGY-NGNSRRNGRCNNLL 300
           LRP SPSSS+RF GE +NN GR+LTSSM REN YVRPPSP+   Y N N R+ G  NNLL
Sbjct: 241 LRPNSPSSSRRFNGEANNNQGRSLTSSMMRENSYVRPPSPNKSYYNNSNMRKYGGSNNLL 300

Query: 301 VKKEDEDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIFL 346
           VK+E E+++ GV+SK +E+ +GGLVSSQDMD+MPIED ENPHIALDCFIFL
Sbjct: 301 VKRESENVMKGVSSKREELGVGGLVSSQDMDLMPIEDVENPHIALDCFIFL 338

[Close]

BLAST of Spo21578.1 vs. NCBI nr
Match: gi|224066779|ref|XP_002302211.1| (hypothetical protein POPTR_0002s07680g [Populus trichocarpa])

HSP 1 Score: 132.9 bits (333), Expect = 1.100e-27
Identity = 133/361 (36.84%), Postives = 184/361 (50.97%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG CISKC+ KK S       EEC+        NNV        +DKL+ISQ   +    
Sbjct: 1   MGCCISKCRPKKRSF------EECH-------GNNV--------EDKLVISQAPKTPKIP 60

Query: 61  PPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSFTSASSSA 120
            P ++ ISP  P  ++S++ S  A      T  T S ++T+SSCS LSS SS  ++    
Sbjct: 61  VPVSNKISPSPPSPTTSTSSSGSAF-----TCCTNSNTTTISSCSSLSSGSSILNSK--- 120

Query: 121 PSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKKPNRPI 180
                D SF+N+FLWSCVKENP ++  N      IK     R+ L        +K   P 
Sbjct: 121 -----DRSFSNEFLWSCVKENPHIIRINS-----IK----ERSQLLASPNVYSRKLGSPA 180

Query: 181 KDFSGPMQ-SLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPE-VEPAR--PVSRSGRDL 240
           K    PMQ S+ + V  S P KR R NSP+ LTRQKSFRREP+   P+   P+SR+ R  
Sbjct: 181 KQVVAPMQQSIPQKVNTSTPHKRVRSNSPTALTRQKSFRREPDRFNPSYSLPISRTLR-- 240

Query: 241 RPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSP---SNKGYNGNSRR-NGRCNN 300
              SPS S+RF G+     GR + +   +E+C  R       S+  ++  SR+ N R  +
Sbjct: 241 ---SPSPSRRFNGDS----GRGILTITPKESCSARTVGARVNSSNSFSSTSRKENLRLPS 300

Query: 301 LLVKKED--------EDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIF 346
             +            E  I+ ++SKI E  +   ++ QD D +P+ED +NP I+LDCFIF
Sbjct: 301 QYINSSQLRSCLRNRETCIHRISSKIDEDAVKEALAQQDSDSIPMEDIDNPLISLDCFIF 309

[Close]

BLAST of Spo21578.1 vs. NCBI nr
Match: gi|568838052|ref|XP_006473031.1| (PREDICTED: uncharacterized protein LOC102627633 [Citrus sinensis])

HSP 1 Score: 130.6 bits (327), Expect = 5.400e-27
Identity = 142/373 (38.07%), Postives = 190/373 (50.94%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKN------ 60
           MG CISKCK  K    K S  +E N  + ++            VQDKL+ISQ+       
Sbjct: 1   MGCCISKCKPTK----KHSIDQEFNHHRHHD------------VQDKLVISQQAPRTPNI 60

Query: 61  -ISSSCSPPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSF 120
            +S+  SP       PLSP +S+SS  S            T +TS+T  SCS LSS++S 
Sbjct: 61  LLSNRISP------CPLSPPSSTSSISSF-----------TCTTSNTSESCSSLSSSAS- 120

Query: 121 TSASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNG 180
                SA SSK D SF+N+FLWSCVKENP ++  N      IK A+    +  ++ Q   
Sbjct: 121 -----SALSSK-DRSFSNEFLWSCVKENPHIIRINS-----IKEASLSLATTKVQAQ--- 180

Query: 181 KKPNRPIKDFSGPM-QSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSRS 240
            K + PIK  +  + QS+   +  S PQKR R +SP+ L+RQKSFRREPE + + P   S
Sbjct: 181 -KLDSPIKSIAATVKQSIPPRINGSTPQKRVRSSSPTPLSRQKSFRREPERQNS-PYILS 240

Query: 241 GRDLRPMSPSSSKRFIGEGHNNLGRNLT-------------------SSMRRENCYVRPP 300
            R LR  SPS S+RF G+ +     N T                   SS+R+EN   RPP
Sbjct: 241 SRGLR--SPSPSRRFSGDSNRGFVTNTTKEICSNRMATKVHNANPVSSSLRKEN--FRPP 300

Query: 301 SPSNKGYNGNSRRNGRCNNLLVKKEDEDMINGVNSKIKEMKMG-GLVSSQDMDMMPIEDA 346
           SPSN  +N    R       L  +  E   + + SKI E+ +   L S  + D +P+ED 
Sbjct: 301 SPSN-NFNSAGLR-------LCLRNKETFTHRIGSKIDEVAVAEALASHGNSDPVPMEDI 311

[Close]

BLAST of Spo21578.1 vs. NCBI nr
Match: gi|567883513|ref|XP_006434315.1| (hypothetical protein CICLE_v10004037mg [Citrus clementina])

HSP 1 Score: 130.6 bits (327), Expect = 5.400e-27
Identity = 141/374 (37.70%), Postives = 190/374 (50.80%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKN------ 60
           MG CISKCK  K    K S  +E N  + ++            VQDKL+ISQ+       
Sbjct: 1   MGCCISKCKPTK----KHSIDQEFNHHRHHD------------VQDKLVISQQAPRTPNI 60

Query: 61  -ISSSCSPPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSF 120
            +S+  SP       PLSP +S+SS  S            T +TS+T  SCS LSS++S 
Sbjct: 61  LLSNRISP------CPLSPPSSTSSISSF-----------TCTTSNTSESCSSLSSSAS- 120

Query: 121 TSASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPI-RCQTN 180
                SA SSK D SF+N+FLWSCVKENP           II++ + ++ SL +   +  
Sbjct: 121 -----SALSSK-DRSFSNEFLWSCVKENPH----------IIRINSIKQASLSLATTKVQ 180

Query: 181 GKKPNRPIKDFSGPM-QSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSR 240
            KK + P+K  +  + QS+   +  S PQKR R +SP+ L+RQKSFRREPE + + P   
Sbjct: 181 AKKLDSPVKSIAATVKQSIPPRINGSTPQKRVRSSSPTPLSRQKSFRREPERQNS-PYIL 240

Query: 241 SGRDLRPMSPSSSKRFIGEGHNNLGRNLT-------------------SSMRRENCYVRP 300
           S R LR  SPS S+RF G+ +     N T                   SS+R+EN   RP
Sbjct: 241 SSRGLR--SPSPSRRFSGDSNRGFVTNTTKEICSNRMATKVHNANPVSSSLRKEN--FRP 300

Query: 301 PSPSNKGYNGNSRRNGRCNNLLVKKEDEDMINGVNSKIKEMKMG-GLVSSQDMDMMPIED 346
           PSPSN  +N    R       L     E   + + SKI E+ +   L S  + D +P+ED
Sbjct: 301 PSPSN-NFNSAGLR-------LCLSNKETFTHRIGSKIDEVAVAEALASHGNSDPVPMED 311

[Close]

BLAST of Spo21578.1 vs. NCBI nr
Match: gi|743845222|ref|XP_011027425.1| (PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica])

HSP 1 Score: 125.9 bits (315), Expect = 1.300e-25
Identity = 131/361 (36.29%), Postives = 183/361 (50.69%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG CISKC+ KK S       EEC+        NNV        +DKL+ISQ   +    
Sbjct: 1   MGCCISKCRPKKRSF------EECH-------GNNV--------EDKLVISQAPKTPKIP 60

Query: 61  PPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSFTSASSSA 120
            P ++ ISP  P  ++S++ S  A      T    S ++T+SSCS LSS SS  S+    
Sbjct: 61  VPVSNKISPSPPSPTTSTSSSGSAF-----TCCNNSNTTTISSCSSLSSGSSILSSK--- 120

Query: 121 PSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKKPNRPI 180
                D SF+N+FLWSCVKENP ++  N      IK  +    S  +  +T G     P 
Sbjct: 121 -----DRSFSNEFLWSCVKENPHIIRINS-----IKERSQLLASPNVYSRTLGL----PA 180

Query: 181 KDFSGPM-QSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPE-VEPAR--PVSRSGRDL 240
           K    P+ QS+ + V  S P KR R +SP+ LTRQKSFRREP+   P+   P+SR+ R  
Sbjct: 181 KQVVAPVKQSIPQKVNTSTPHKRVRSSSPTALTRQKSFRREPDRCNPSHSLPISRTLR-- 240

Query: 241 RPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSP---SNKGYNGNSRR-NGRCNN 300
              SPS S+RF G+     GR + +   +E+C   P      S   ++  SR+ N R  +
Sbjct: 241 ---SPSPSRRFNGDS----GRGVLTITPKESCSACPVGARVNSANSFSSTSRKENLRLPS 300

Query: 301 LLVKKED--------EDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIF 346
             +            E  I+ ++SKI E  +   ++ QD D +P+ED +NP I+LDCFIF
Sbjct: 301 QYINSSQLRSCLRNRETCIHRISSKIDEDAVKEALAQQDSDSIPMEDIDNPLISLDCFIF 309

[Close]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FVG0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g010430 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 3.200e-111
Identity = 248/351 (70.66%), Postives = 283/351 (80.63%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG+CISKCK KK SKK Q KQEECN CQC EKN  + + TPLV QDKL+ISQ  ISS   
Sbjct: 1   MGSCISKCKPKKTSKKNQQKQEECN-CQCIEKNITI-SSTPLV-QDKLVISQLPISS--- 60

Query: 61  PPKT--SLISPLSPINSSSSTKSSCAMNSYYPTTTT---TSTSSTMSSCSLLSSASSFTS 120
           PP T  ++ISP SP+ SSSS KSSC  NS YPTT+T   TSTS++ SSCS+LSSASSF S
Sbjct: 61  PPTTKCTIISPSSPLTSSSSAKSSCT-NSNYPTTSTSTSTSTSASSSSCSVLSSASSFAS 120

Query: 121 ASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKK 180
           A+SS  SSK D +F+ND+LWSCVKENPQ+LN +  YLP+IKV NPRRNSLPIRCQ NGKK
Sbjct: 121 AASSM-SSKFDQAFSNDYLWSCVKENPQILNSH--YLPMIKVLNPRRNSLPIRCQNNGKK 180

Query: 181 PNRPIKDFSGPMQSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSRSGRD 240
           PNR  ++F GP  S QRVVVRSA QKRPRCNSPSNLTRQKSFR EPEVEP RP+SRSGRD
Sbjct: 181 PNR-YREFPGP--SPQRVVVRSAAQKRPRCNSPSNLTRQKSFRGEPEVEPIRPISRSGRD 240

Query: 241 LRPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSPSNKGY-NGNSRRNGRCNNLL 300
           LRP SPSSS+RF GE +NN GR+LTSSM REN YVRPPSP+   Y N N R+ G  NNLL
Sbjct: 241 LRPNSPSSSRRFNGEANNNQGRSLTSSMMRENSYVRPPSPNKSYYNNSNMRKYGGSNNLL 300

Query: 301 VKKEDEDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIFL 346
           VK+E E+++ GV+SK +E+ +GGLVSSQDMD+MPIED ENPHIALDCFIFL
Sbjct: 301 VKRESENVMKGVSSKREELGVGGLVSSQDMDLMPIEDVENPHIALDCFIFL 338

[Close]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Match: A9PBA8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s07680g PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.600e-28
Identity = 133/361 (36.84%), Postives = 184/361 (50.97%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG CISKC+ KK S       EEC+        NNV        +DKL+ISQ   +    
Sbjct: 1   MGCCISKCRPKKRSF------EECH-------GNNV--------EDKLVISQAPKTPKIP 60

Query: 61  PPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSFTSASSSA 120
            P ++ ISP  P  ++S++ S  A      T  T S ++T+SSCS LSS SS  ++    
Sbjct: 61  VPVSNKISPSPPSPTTSTSSSGSAF-----TCCTNSNTTTISSCSSLSSGSSILNSK--- 120

Query: 121 PSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKKPNRPI 180
                D SF+N+FLWSCVKENP ++  N      IK     R+ L        +K   P 
Sbjct: 121 -----DRSFSNEFLWSCVKENPHIIRINS-----IK----ERSQLLASPNVYSRKLGSPA 180

Query: 181 KDFSGPMQ-SLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPE-VEPAR--PVSRSGRDL 240
           K    PMQ S+ + V  S P KR R NSP+ LTRQKSFRREP+   P+   P+SR+ R  
Sbjct: 181 KQVVAPMQQSIPQKVNTSTPHKRVRSNSPTALTRQKSFRREPDRFNPSYSLPISRTLR-- 240

Query: 241 RPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSP---SNKGYNGNSRR-NGRCNN 300
              SPS S+RF G+     GR + +   +E+C  R       S+  ++  SR+ N R  +
Sbjct: 241 ---SPSPSRRFNGDS----GRGILTITPKESCSARTVGARVNSSNSFSSTSRKENLRLPS 300

Query: 301 LLVKKED--------EDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPHIALDCFIF 346
             +            E  I+ ++SKI E  +   ++ QD D +P+ED +NP I+LDCFIF
Sbjct: 301 QYINSSQLRSCLRNRETCIHRISSKIDEDAVKEALAQQDSDSIPMEDIDNPLISLDCFIF 309

[Close]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Match: V4T7U2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004037mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.800e-27
Identity = 141/374 (37.70%), Postives = 190/374 (50.80%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKN------ 60
           MG CISKCK  K    K S  +E N  + ++            VQDKL+ISQ+       
Sbjct: 1   MGCCISKCKPTK----KHSIDQEFNHHRHHD------------VQDKLVISQQAPRTPNI 60

Query: 61  -ISSSCSPPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSF 120
            +S+  SP       PLSP +S+SS  S            T +TS+T  SCS LSS++S 
Sbjct: 61  LLSNRISP------CPLSPPSSTSSISSF-----------TCTTSNTSESCSSLSSSAS- 120

Query: 121 TSASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPI-RCQTN 180
                SA SSK D SF+N+FLWSCVKENP           II++ + ++ SL +   +  
Sbjct: 121 -----SALSSK-DRSFSNEFLWSCVKENPH----------IIRINSIKQASLSLATTKVQ 180

Query: 181 GKKPNRPIKDFSGPM-QSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSR 240
            KK + P+K  +  + QS+   +  S PQKR R +SP+ L+RQKSFRREPE + + P   
Sbjct: 181 AKKLDSPVKSIAATVKQSIPPRINGSTPQKRVRSSSPTPLSRQKSFRREPERQNS-PYIL 240

Query: 241 SGRDLRPMSPSSSKRFIGEGHNNLGRNLT-------------------SSMRRENCYVRP 300
           S R LR  SPS S+RF G+ +     N T                   SS+R+EN   RP
Sbjct: 241 SSRGLR--SPSPSRRFSGDSNRGFVTNTTKEICSNRMATKVHNANPVSSSLRKEN--FRP 300

Query: 301 PSPSNKGYNGNSRRNGRCNNLLVKKEDEDMINGVNSKIKEMKMG-GLVSSQDMDMMPIED 346
           PSPSN  +N    R       L     E   + + SKI E+ +   L S  + D +P+ED
Sbjct: 301 PSPSN-NFNSAGLR-------LCLSNKETFTHRIGSKIDEVAVAEALASHGNSDPVPMED 311

[Close]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Match: A0A068UTS8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035289001 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.900e-24
Identity = 128/369 (34.69%), Postives = 185/369 (50.14%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKLIISQKNISSSCS 60
           MG+CISKC+ KK  K+          C C E++ +        VQ+KL+ISQ  +     
Sbjct: 1   MGSCISKCRPKKKFKRD---------CNCMEEDFSH-------VQEKLVISQPPL----- 60

Query: 61  PPKTSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSFTSASSSA 120
            P  + +SP   + SS+S  S    NS        STSS  S+ S LSS+SS    SSS 
Sbjct: 61  -PIQNPVSPSPSVTSSTSFSSVSCANS--------STSSGFSNASSLSSSSS---CSSSI 120

Query: 121 PSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNGKKPNRPI 180
           P SK D SF+N+FLWSCVKENPQ++  N     ++K  N  ++S+ +  + +  K + PI
Sbjct: 121 PVSK-DRSFSNEFLWSCVKENPQIIGRN-----LVK-GNLEKSSMNMSSKVHPCKFDLPI 180

Query: 181 KDFSGPMQSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPE--VEPARPVSRSGRDLRP 240
           K      Q++      S P+KR R NSP+ L RQKSFR+EPE  V  +       R L  
Sbjct: 181 K------QAIPERHGGSTPKKRARANSPT-LIRQKSFRKEPEHKVSSSPAYQLPSRTLMM 240

Query: 241 MSPSSSKRFIGEGHNNLGRN----------------------LTSSMRRENCYVRPPSPS 300
            SPS S+RF G+   +   N                       +SS+ R++ +  PPSPS
Sbjct: 241 RSPSPSRRFTGDSFRDSPMNTAKEIYSRRAAVPKANSINPIPTSSSIMRKDSFRIPPSPS 300

Query: 301 NKGYNGNSRRNGRCNNLLVKKEDEDMINGVNSKIKEMKMGGLVSSQDMDMMPIEDAENPH 346
              Y+         +N ++K  +  +   + S+   + +G   ++QD++ M +ED  NP 
Sbjct: 301 ---YDLGK------SNTILKSREALITQQIGSRNSPIAVGQKEANQDVESMVVEDVNNPL 313

[Close]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Match: A0A067K9I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12183 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.500e-23
Identity = 130/353 (36.83%), Postives = 180/353 (50.99%), Query Frame = 1


		  
Query: 1   MGACISKCKTKKNSKKKQSKQEECNKCQCNEKNNNVCTKTPLVVQDKL-IISQ--KNISS 60
           MG CISKCK KKNS +  +                       +VQDKL IISQ  KN  +
Sbjct: 1   MGCCISKCKPKKNSIQDIN-----------------------LVQDKLVIISQPPKNPKT 60

Query: 61  SCSPPK----TSLISPLSPINSSSSTKSSCAMNSYYPTTTTTSTSSTMSSCSLLSSASSF 120
             S P     T +ISP SP  SS+S+ SS          T T+ SS   S S +SS+SS 
Sbjct: 61  PISIPTSNKITPIISPPSPTTSSTSSISSF---------TCTNNSSNGISTSTISSSSST 120

Query: 121 TSASSSAPSSKLDPSFTNDFLWSCVKENPQLLNGNGDYLPIIKVANPRRNSLPIRCQTNG 180
           +S SSS+ S+  D SF+N+FLWSC+KENP ++  N      IK      +        + 
Sbjct: 121 SSGSSSSISTLKDRSFSNEFLWSCIKENPHVIRINS-----IKEC----SQFLTPPNVHS 180

Query: 181 KKPNRPIKDFSGPMQSLQRVVVRSAPQKRPRCNSPSNLTRQKSFRREPEVEPARPVSRSG 240
           +K   P+K++S P +     + +S PQKR R +SP+ L RQKSFRRE E         S 
Sbjct: 181 RKLESPVKNYSIPQK-----LNKSTPQKRIRSDSPTPLNRQKSFRREAE------RINSL 240

Query: 241 RDLRPMSPSSSKRFIGEGHNNLGRNLTSSMRRENCYVRPPSPSNKGYNGNSRRNGRCNNL 300
             L   SPS+S+RF G G  ++  N +  M   NC V   S S+      + RN R    
Sbjct: 241 HSLPLKSPSASRRFNGRGF-SIKENGSKPM-VSNCKVNDYSVSSLSSRKENHRNPRS--- 296

Query: 301 LVKKEDEDMINGVNSKIKEMKMGGLVSSQDMDMMPI-EDAENPHIALDCFIFL 346
            +K   +  I+ ++SKI E+ +   ++  D + +P+ ED +NP I+LDCFIFL
Sbjct: 301 CLKNNRQTCIHRISSKINEVAVQQALAQHDSESVPMEEDIDNPLISLDCFIFL 296

The following BLAST results are available for this feature:

BLAST of Spo21578.1 vs. NCBI nr
BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
BLAST of Spo21578.1 vs. ExPASy Swiss-Prot
BLAST of Spo21578.1 vs. TAIR (Arabidopsis)

BLAST of Spo21578.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|870868860\|gb\|KMT19656.1\|	4.6e-111	70.6	hypothetical protein BVRB_1g01...	[more]
gi\|224066779\|ref\|XP_002302211.1\|	1.1e-27	36.8	hypothetical protein POPTR_000...	[more]
gi\|568838052\|ref\|XP_006473031.1\|	5.4e-27	38.0	PREDICTED: uncharacterized pro...	[more]
gi\|567883513\|ref\|XP_006434315.1\|	5.4e-27	37.7	hypothetical protein CICLE_v10...	[more]
gi\|743845222\|ref\|XP_011027425.1\|	1.3e-25	36.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo21578.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8FVG0_BETVU	3.2e-111	70.6	Uncharacterized protein OS=Bet...	[more]
A9PBA8_POPTR	7.6e-28	36.8	Uncharacterized protein OS=Pop...	[more]
V4T7U2_9ROSI	3.8e-27	37.7	Uncharacterized protein OS=Cit...	[more]
A0A068UTS8_COFCA	3.9e-24	34.6	Uncharacterized protein OS=Cof...	[more]
A0A067K9I2_JATCU	1.5e-23	36.8	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo21578.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo21578.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo06393	0.66	Barchart \| Table
Spo21465	0.66	Barchart \| Table
Spo26232	0.66	Barchart \| Table
Spo08589	0.65	Barchart \| Table