Spo21593 (gene)

Overview
NameSpo21593
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionThioredoxin m family protein
Locationchr2 : 55862711 .. 55864732 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAGTGGTCCTTACAAACAAAAATGATTTACGAAATAGGGACTCAAACAAATGTGATCCACATGAATTTGATCATTCTATGCACCTCAGAAATCTGAACAAAGTTATCCACAATTCTTCCCCTCAACTAAATCTAAAACCTGTATTTCCTCCACATTACTACTACTTGTAAAACAAAGAGCAAAAAAGTTCAACAAAATAAATTAATAATATTATCATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGGTTAGTTTTTCTTCCTTTTCACTACCATAATTGCAGAATTTCTATCTCTATCAGTTTTCTTATTCCATTTTAAATTTTACATTTTTGGCTATTAAATTTGTTGTATGTATCTGCAATTTCAATAAATCATACTCTATACTAGGAAATTGTAGTGTATGTTACTCAGACTCAGGGTACTAGCTAGCGTCGGACATGGGTACGTGTTCAAGTGTTCGACATGGCTAAATTGGAGAAAATTTCCTTGATTTTAGACCAAGATGAAGGTTTGGAGTGTCCACAACTCCACTTTCATGTCCAAGTGCCGAGAATCCGACACGGATACTTGAGGTTAAACAAAGAGTTTGAGTAACATGATTGTAGCTTGTTTATAATCTTTATAGATATCCTATGTCCAATATGTTAGAATACGCCCTGAATCGGTCAAGTTCCTTCACTGCATCGCCCTATCATTAATGGGGTTCGAAGGCCTATTTTCTGGACTAGGGTTATCTGATTCGAAAACATTATGATATCCATTAGTAGGATTATCTGTTTTGGGCTTGTTTTTTGGGTTTTTCGGCATCTGTCTAGAGTGTACTATATAAGCTCATAACCTAATTGTATTTTGTTTTGTATTCCTTAAGATAAATAAAGCTTCCTCTTGTGTGTCTGTGAACGTAATTAAAACATTGTTAATGAACCACGTTATAACATAATATTTTTCCTATAACTTTGTAACATTGATTTATTAGCCTTGTTTTGATTTGAGTGTACAATAGAGCAATTGAACATACAAAATAATCCCACAAAACAAGTGATTTTGTTTTACATTAAGCACTAATTAAATCAGCTAGCAAAACTGATAAATTTCTTGTTTTGTGTTTATAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAAAATAAACACATACTTTGAACTGGAGTACATGTGTTTTTTTTACGGAGTTTTATTTTAGGGGTGCAACGCGAGGACTTCTAGAAGGTCACTCATCCTGGTACTACTCTTGTAAAAACATACATGTGTTTTAGTACTAATTAAAGATCTCAGTCTCTGTCTCTTTTTTCGTAATTTGAAAAACAAAACTAAGGAACAACTCCATTTGATGAAGAGAGTTGGTTTTAGTATTTTGTATATCATCGATCATTTGTTGATATTATTGTGATATCTTTCAATGTTTAGAAGAATATGTTAATTAATTACTCAGAGCTTCTGTATAGTTTGATTTCCTGCTGTTAAATGAGTTGCTGTATTGTGAAAATTGGATGGATCTTAGCCAAGTAGAGTTCTGG

mRNA sequence

CCAAGTGGTCCTTACAAACAAAAATGATTTACGAAATAGGGACTCAAACAAATGTGATCCACATGAATTTGATCATTCTATGCACCTCAGAAATCTGAACAAAGTTATCCACAATTCTTCCCCTCAACTAAATCTAAAACCTGTATTTCCTCCACATTACTACTACTTGTAAAACAAAGAGCAAAAAAGTTCAACAAAATAAATTAATAATATTATCATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAAAATAAACACATACTTTGAACTGGAGTACATGTGTTTTTTTTACGGAGTTTTATTTTAGGGGTGCAACGCGAGGACTTCTAGAAGGTCACTCATCCTGGTACTACTCTTGTAAAAACATACATGTGTTTTAGTACTAATTAAAGATCTCAGTCTCTGTCTCTTTTTTCGTAATTTGAAAAACAAAACTAAGGAACAACTCCATTTGATGAAGAGAGTTGGTTTTAGTATTTTGTATATCATCGATCATTTGTTGATATTATTGTGATATCTTTCAATGTTTAGAAGAATATGTTAATTAATTACTCAGAGCTTCTGTATAGTTTGATTTCCTGCTGTTAAATGAGTTGCTGTATTGTGAAAATTGGATGGATCTTAGCCAAGTAGAGTTCTGG

Coding sequence (CDS)

ATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAA

Protein sequence

MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLSP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21593.1Spo21593.1mRNA


Homology
BLAST of Spo21593.1 vs. NCBI nr
Match: gi|2507458|sp|P07591.2|TRXM_SPIOL (RecName: Full=Thioredoxin M-type, chloroplastic; Short=Trx-M; Contains: RecName: Full=Thioredoxin M-type Mc; Contains: RecName: Full=Thioredoxin M-type Md; Flags: Precursor)

HSP 1 Score: 359.4 bits (921), Expect = 3.700e-96
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|21354|emb|CAA35827.1| (unnamed protein product [Spinacia oleracea])

HSP 1 Score: 354.4 bits (908), Expect = 1.200e-94
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHV+HLQPSSK+NVP+FRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVYHLQPSSKLNVPSFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|731361935|ref|XP_010692624.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 300.8 bits (769), Expect = 1.600e-78
Identity = 155/185 (83.78%), Postives = 168/185 (90.81%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSS-----VSSS 60
           MAIENCLQLST+ASVGTVAVKSH   L P  K+N+ TF+GLK+SFPALSSS     VSSS
Sbjct: 1   MAIENCLQLSTTASVGTVAVKSHALQLPPY-KLNLTTFQGLKKSFPALSSSASTSLVSSS 60

Query: 61  SPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVID 120
           SPR +R SSVVCKASEAVK+VQDVNDSSWKE VL+S+VPVMVDFWAPWCGPCKLIAPV+D
Sbjct: 61  SPRTYRKSSVVCKASEAVKQVQDVNDSSWKELVLDSQVPVMVDFWAPWCGPCKLIAPVVD 120

Query: 121 ELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSI 180
           ELAKE+SGKIAVYKLNTDE+P IATQYNIRSIPTVLFFKNGERKESIIGAVPKSTL D+I
Sbjct: 121 ELAKEFSGKIAVYKLNTDESPNIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLADTI 180

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|756179878|gb|AJK93574.1| (chloroplast M-type thioredoxin [Suaeda glauca])

HSP 1 Score: 296.2 bits (757), Expect = 3.900e-77
Identity = 152/186 (81.72%), Postives = 169/186 (90.86%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSS---- 60
           MA+ENCLQLSTSASVGTVAVKSH H+L PS K+N+PTF+GLK+SF +LSSS  +SS    
Sbjct: 1   MALENCLQLSTSASVGTVAVKSHAHYL-PSYKLNLPTFQGLKKSFSSLSSSSYASSSSLL 60

Query: 61  --PRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
             PR+ R S VVCKASEAVK+VQDVND+SWKE VLES++PVMVDFWAPWCGPCKLIAPVI
Sbjct: 61  SSPRRCRSSIVVCKASEAVKQVQDVNDASWKEQVLESQIPVMVDFWAPWCGPCKLIAPVI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEYSGKIAVYKLNTDE+P IATQY+IRSIPTVLFFKNGERKESIIGAVPKSTLTD+
Sbjct: 121 DELAKEYSGKIAVYKLNTDESPNIATQYSIRSIPTVLFFKNGERKESIIGAVPKSTLTDT 180

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|388504900|gb|AFK40516.1| (unknown [Lotus japonicus])

HSP 1 Score: 225.3 bits (573), Expect = 8.400e-56
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MA+E+CLQ++T   VGTVA    +H      KV  PT+RG K+ F   S S +SS+P  +
Sbjct: 1   MAMESCLQVTT---VGTVARPQSLHPFSAREKVVFPTYRGFKKCF---SKSATSSNPSLY 60

Query: 61  ------RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
                 R  SV+C A EAV EV+ V +SSW + V+ SE+PV+VDFWAPWCGPC++IAP+I
Sbjct: 61  SAAGTNRKFSVICNAREAVNEVKVVTESSWNDLVIASEIPVLVDFWAPWCGPCRMIAPLI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEY+GKIA YKLNTD++P IATQY IRSIPTVLFFKNGE+KES+IGAVPKSTLT S
Sbjct: 121 DELAKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLTAS 180

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJC2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_172740 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.400e-95
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHV+HLQPSSK+NVP+FRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVYHLQPSSKLNVPSFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI85_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g021580 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.100e-78
Identity = 155/185 (83.78%), Postives = 168/185 (90.81%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSS-----VSSS 60
           MAIENCLQLST+ASVGTVAVKSH   L P  K+N+ TF+GLK+SFPALSSS     VSSS
Sbjct: 1   MAIENCLQLSTTASVGTVAVKSHALQLPPY-KLNLTTFQGLKKSFPALSSSASTSLVSSS 60

Query: 61  SPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVID 120
           SPR +R SSVVCKASEAVK+VQDVNDSSWKE VL+S+VPVMVDFWAPWCGPCKLIAPV+D
Sbjct: 61  SPRTYRKSSVVCKASEAVKQVQDVNDSSWKELVLDSQVPVMVDFWAPWCGPCKLIAPVVD 120

Query: 121 ELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSI 180
           ELAKE+SGKIAVYKLNTDE+P IATQYNIRSIPTVLFFKNGERKESIIGAVPKSTL D+I
Sbjct: 121 ELAKEFSGKIAVYKLNTDESPNIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLADTI 180

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AX10_9CARY (Suaeda glauca chloroplast M-type thioredoxin mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.700e-77
Identity = 152/186 (81.72%), Postives = 169/186 (90.86%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSS---- 60
           MA+ENCLQLSTSASVGTVAVKSH H+L PS K+N+PTF+GLK+SF +LSSS  +SS    
Sbjct: 1   MALENCLQLSTSASVGTVAVKSHAHYL-PSYKLNLPTFQGLKKSFSSLSSSSYASSSSLL 60

Query: 61  --PRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
             PR+ R S VVCKASEAVK+VQDVND+SWKE VLES++PVMVDFWAPWCGPCKLIAPVI
Sbjct: 61  SSPRRCRSSIVVCKASEAVKQVQDVNDASWKEQVLESQIPVMVDFWAPWCGPCKLIAPVI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEYSGKIAVYKLNTDE+P IATQY+IRSIPTVLFFKNGERKESIIGAVPKSTLTD+
Sbjct: 121 DELAKEYSGKIAVYKLNTDESPNIATQYSIRSIPTVLFFKNGERKESIIGAVPKSTLTDT 180

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: I3SJS4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.900e-56
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MA+E+CLQ++T   VGTVA    +H      KV  PT+RG K+ F   S S +SS+P  +
Sbjct: 1   MAMESCLQVTT---VGTVARPQSLHPFSAREKVVFPTYRGFKKCF---SKSATSSNPSLY 60

Query: 61  ------RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
                 R  SV+C A EAV EV+ V +SSW + V+ SE+PV+VDFWAPWCGPC++IAP+I
Sbjct: 61  SAAGTNRKFSVICNAREAVNEVKVVTESSWNDLVIASEIPVLVDFWAPWCGPCRMIAPLI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEY+GKIA YKLNTD++P IATQY IRSIPTVLFFKNGE+KES+IGAVPKSTLT S
Sbjct: 121 DELAKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLTAS 180

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: E0CQM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15310 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.200e-54
Identity = 114/182 (62.64%), Postives = 136/182 (74.73%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSS---SSP 60
           MA+ENC Q+ST +      ++SH H      K+N+PT +G+K S  + SSS SS   S  
Sbjct: 1   MALENCFQVSTVSCARAGVLQSH-HPFSAKEKLNLPTCKGVKPSILSFSSSPSSLDYSFH 60

Query: 61  RQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDEL 120
           R  R S +VCKA EAV EVQ V DSSW   V+ SE PV+V+FWAPWCGPC++IAPVIDEL
Sbjct: 61  RICRKSRIVCKAREAVDEVQVVTDSSWSNVVIASENPVLVEFWAPWCGPCRMIAPVIDEL 120

Query: 121 AKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEK 180
           AKEY+GKI   K+NTD+ P IATQY IRSIPTVLFFKNGERKES+IGAVPKSTLT +IEK
Sbjct: 121 AKEYAGKIVCCKVNTDDCPNIATQYGIRSIPTVLFFKNGERKESVIGAVPKSTLTATIEK 180

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 2.300e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1

		  

Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.100e-46
Identity = 84/115 (73.04%), Postives = 100/115 (86.96%), Query Frame = 1

		  

Query: 65  VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK 124
           V+  A EAV EVQ VNDSSW E V+ SE PV+VDFWAPWCGPC++IAP+IDELAKEY+GK
Sbjct: 58  VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGK 117

Query: 125 IAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           I  YKLNTDE+P  AT+Y IRSIPTVLFFKNGERK+S+IGAVPK+TL++ +EKY+
Sbjct: 118 IKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM5_ORYSJ (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.800e-40
Identity = 84/141 (59.57%), Postives = 103/141 (73.05%), Query Frame = 1

		  

Query: 40  GLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDF 99
           G  +S P LS  V+S SP +   S   C+ S  V EV   ++ +W   VL SE PV+V+F
Sbjct: 34  GSSQSKPRLS--VASPSPLR-PASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEF 93

Query: 100 WAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERK 159
           WAPWCGPC++IAPVIDELAKEY GKI   K+NTD++P IAT Y IRSIPTVL FKNGE+K
Sbjct: 94  WAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKK 153

Query: 160 ESIIGAVPKSTLTDSIEKYLS 181
           ES+IGAVPK+TL   I+KY+S
Sbjct: 154 ESVIGAVPKTTLATIIDKYVS 171

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 9.400e-39
Identity = 80/179 (44.69%), Postives = 120/179 (67.04%), Query Frame = 1

		  

Query: 7   LQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS-- 66
           L ++ S S  + A       + P+  +    FRGLK S   ++ S S  + R+ R +   
Sbjct: 16  LPIAASVSSSSAAPSVSRRRISPARFLE---FRGLKSSRSLVTQSASLGANRRTRIARGG 75

Query: 67  -VVCKASE---AVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 126
            + C+A +   A  EV +++DS W+  VLES+VPV+V+FWAPWCGPC++I P++D+LAK+
Sbjct: 76  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 135

Query: 127 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           ++GK   YK+NTDE+P  A +Y IRS+PTV+ FK GE+K+SIIGAVP+ TL  +IE++L
Sbjct: 136 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM1_ORYSJ (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.700e-38
Identity = 73/118 (61.86%), Postives = 94/118 (79.66%), Query Frame = 1

		  

Query: 64  SVVCKAS--EAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEY 123
           SVVC A   E   +V DV  S+W+  V+ESE+PV+V+FWA WCGPCK+I PVI +L+KEY
Sbjct: 54  SVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEY 113

Query: 124 SGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
            GK+  YKLNTDE P IATQ+ IRSIPT++ FKNGE+K+++IGAVP+STL  SI+KY+
Sbjct: 114 EGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT3G15360.1 (thioredoxin M-type 4)

HSP 1 Score: 161.4 bits (407), Expect = 5.300e-40
Identity = 80/179 (44.69%), Postives = 120/179 (67.04%), Query Frame = 1

		  

Query: 7   LQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS-- 66
           L ++ S S  + A       + P+  +    FRGLK S   ++ S S  + R+ R +   
Sbjct: 16  LPIAASVSSSSAAPSVSRRRISPARFLE---FRGLKSSRSLVTQSASLGANRRTRIARGG 75

Query: 67  -VVCKASE---AVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 126
            + C+A +   A  EV +++DS W+  VLES+VPV+V+FWAPWCGPC++I P++D+LAK+
Sbjct: 76  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 135

Query: 127 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           ++GK   YK+NTDE+P  A +Y IRS+PTV+ FK GE+K+SIIGAVP+ TL  +IE++L
Sbjct: 136 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT4G03520.1 (Thioredoxin superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 2.600e-39
Identity = 75/147 (51.02%), Postives = 106/147 (72.11%), Query Frame = 1

		  

Query: 35  VPTFRGLKRSFPALSSSVSS-SSPRQFRYS-SVVCKASEAVKEVQDVNDSSWKEFVLESE 94
           +P   GL+       +S++S   PR  R   +VVC+A E   ++Q VNDS+W   VL++ 
Sbjct: 39  LPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKAT 98

Query: 95  VPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLF 154
            PV+VDFWAPWCGPCK+I P++++LA+ Y+GKI  YKLNTDE+P    QY +RSIPT++ 
Sbjct: 99  GPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMI 158

Query: 155 FKNGERKESIIGAVPKSTLTDSIEKYL 180
           F  GE+K++IIGAVPK+TLT S++K+L
Sbjct: 159 FVGGEKKDTIIGAVPKTTLTSSLDKFL 185

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT1G03680.1 (thioredoxin M-type 1)

HSP 1 Score: 151.0 bits (380), Expect = 7.100e-37
Identity = 71/145 (48.97%), Postives = 98/145 (67.59%), Query Frame = 1

		  

Query: 35  VPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVP 94
           +P   GL+      S S +S   R  R   V+C+A +    +  VNDS+W   VL+++ P
Sbjct: 37  LPESSGLRTRVSLSSLSKNSRVSRLRR--GVICEAQDTATGIPVVNDSTWDSLVLKADEP 96

Query: 95  VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 154
           V VDFWAPWCGPCK+I P+++ELA++Y+G+   YKLNTDE+P    QY +RSIPT++ F 
Sbjct: 97  VFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFV 156

Query: 155 NGERKESIIGAVPKSTLTDSIEKYL 180
           NGE+K++IIGAV K TL  SI K+L
Sbjct: 157 NGEKKDTIIGAVSKDTLATSINKFL 179

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT2G15570.2 (Thioredoxin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 7.900e-28
Identity = 67/173 (38.73%), Postives = 102/173 (58.96%), Query Frame = 1

		  

Query: 10  STSASVGTVAVKSHV--HHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVC 69
           S+S+S+     + H   H   PS    V +F      F    S +SSS+ R  R S +  
Sbjct: 5   SSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASR-LRLSPLCV 64

Query: 70  KASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAV 129
           + S A  EV      SW++ VL+SE PV+V+F+  WCGPC+++  +IDE+A +Y+GK+  
Sbjct: 65  RDSRAAAEV---TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 124

Query: 130 YKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 181
           Y LN D    +A +Y I+++P VL FKNGE++ESI+G +PK     +IE+ L+
Sbjct: 125 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLN 173

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT1G43560.1 (thioredoxin Y2)

HSP 1 Score: 91.7 bits (226), Expect = 5.100e-19
Identity = 37/98 (37.76%), Postives = 67/98 (68.37%), Query Frame = 1

		  

Query: 82  SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQ 141
           +S+ + +  S+ PV+VDF+A WCGPC+L+ P+++E+++     IAV K++T++ P +A +
Sbjct: 66  NSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANK 125

Query: 142 YNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           Y I ++PT + FK+G+  +   GA+P + L + IE  L
Sbjct: 126 YQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSL 163

The following BLAST results are available for this feature:
BLAST of Spo21593.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|2507458|sp|P07591.2|TRXM_SPIOL3.7e-96100.RecName: Full=Thioredoxin M-ty... [more]
gi|21354|emb|CAA35827.1|1.2e-9498.3unnamed protein product [Spina... [more]
gi|731361935|ref|XP_010692624.1|1.6e-7883.7PREDICTED: thioredoxin M-type,... [more]
gi|756179878|gb|AJK93574.1|3.9e-7781.7chloroplast M-type thioredoxin... [more]
gi|388504900|gb|AFK40516.1|8.4e-5661.2unknown [Lotus japonicus][more]
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BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QJC2_SPIOL8.4e-9598.3Uncharacterized protein OS=Spi... [more]
A0A0J8BI85_BETVU1.1e-7883.7Uncharacterized protein OS=Bet... [more]
A0A0C5AX10_9CARY2.7e-7781.7Suaeda glauca chloroplast M-ty... [more]
I3SJS4_LOTJA5.9e-5661.2Uncharacterized protein OS=Lot... [more]
E0CQM3_VITVI3.2e-5462.6Putative uncharacterized prote... [more]
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BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TRXM_SPIOL2.3e-98100.Thioredoxin M-type, chloroplas... [more]
TRXM_PEA2.1e-4673.0Thioredoxin M-type, chloroplas... [more]
TRXM5_ORYSJ3.8e-4059.5Thioredoxin M5, chloroplastic ... [more]
TRXM4_ARATH9.4e-3944.6Thioredoxin M4, chloroplastic ... [more]
TRXM1_ORYSJ2.7e-3861.8Thioredoxin M1, chloroplastic ... [more]
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BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G15360.15.3e-4044.6thioredoxin M-type 4[more]
AT4G03520.12.6e-3951.0Thioredoxin superfamily protei... [more]
AT1G03680.17.1e-3748.9thioredoxin M-type 1[more]
AT2G15570.27.9e-2838.7Thioredoxin superfamily protei... [more]
AT1G43560.15.1e-1937.7thioredoxin Y2[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 2..180
score: 2.7
IPR005746ThioredoxinTIGRFAMsTIGR01068TIGR01068coord: 80..178
score: 3.5
IPR012336Thioredoxin-like foldGENE3D3.40.30.10coord: 67..180
score: 2.5
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 62..180
score: 1.66
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 76..177
score: 2.2
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 64..180
score: 14
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 96..114
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 103..112
score: 2.4E-9coord: 95..103
score: 2.4E-9coord: 143..154
score: 2.
NoneNo IPR availablePANTHERPTHR10438:SF290SUBFAMILY NOT NAMEDcoord: 2..180
score: 2.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009058 biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0032955 regulation of division septum assembly
biological_process GO:0006457 protein folding
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0009735 response to cytokinin
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0015979 photosynthesis
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0015693 magnesium ion transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0006826 iron ion transport
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006886 intracellular protein transport
biological_process GO:0046786 viral replication complex formation and maintenance
biological_process GO:0009853 photorespiration
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0016043 cellular component organization
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0009414 response to water deprivation
biological_process GO:0009744 response to sucrose
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0010155 regulation of proton transport
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0010117 photoprotection
biological_process GO:0071484 cellular response to light intensity
biological_process GO:0009416 response to light stimulus
biological_process GO:1901401 regulation of tetrapyrrole metabolic process
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0009639 response to red or far red light
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0006879 cellular iron ion homeostasis
biological_process GO:0006364 rRNA processing
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0046500 S-adenosylmethionine metabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0046251 limonene catabolic process
biological_process GO:0006554 lysine catabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006574 valine catabolic process
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0006479 protein methylation
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0072593 reactive oxygen species metabolic process
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0016556 mRNA modification
biological_process GO:0006040 amino sugar metabolic process
biological_process GO:0010150 leaf senescence
biological_process GO:0055072 iron ion homeostasis
biological_process GO:0055085 transmembrane transport
biological_process GO:0030154 cell differentiation
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006396 RNA processing
biological_process GO:0006417 regulation of translation
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0009902 chloroplast relocation
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:1901918 negative regulation of exoribonuclease activity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
cellular_component GO:0034357 photosynthetic membrane
cellular_component GO:0044425 membrane part
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0030076 light-harvesting complex
cellular_component GO:0005634 nucleus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0009705 plant-type vacuole membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009512 cytochrome b6f complex
cellular_component GO:0016020 membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity
molecular_function GO:0046914 transition metal ion binding
molecular_function GO:0003779 actin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0003973 (S)-2-hydroxy-acid oxidase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008199 ferric iron binding
molecular_function GO:0004322 ferroxidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0015095 magnesium ion transmembrane transporter activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0051087 chaperone binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0008194 UDP-glycosyltransferase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016853 isomerase activity
molecular_function GO:0004300 enoyl-CoA hydratase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0009055 electron transfer activity
RNA-Seq Expression