Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGTTCGCAAGTCCCACCTCTCAATTCCAAGCTCTCTCTTTCACTGTCTATATTTCTCTCTCCTCTGCTTCTCTATAAAAACGGCATTAGCATTTCCCAACTCCCACACTTTAAAACAATAATAATATCTCACTCTCTCTTTCTCTCTCATTTCTTTTCAACATTCGCAAAGAAACCCAGTTTATAATTCGACTGTATTATCTTCAAAATATTAACCAAAGATAACATCCTCTGTTCACCCCTGTTTTCAATTTCCCAGAAACATATAATCACAAAATGATGAATGTTGCTCATTTCATCTTCGGAGTTTTTGGTGGGTTTTCTGCTTTTTTCAATTATGTTTCTCAATTTCAATCAGTTCTTCTTGTTTTTTTCTGTAATTTGAAGTAATTCTGATATCTGTTTCTTGGTTTTTGGTTTTTTTTGCAGGAAATGCAACTGCTCTGTTTCTCTTCTTAGCACCAGTGTAAGTTACTAATTTTCTTACAAAAATTAAAACCCATGAATTTTTCCACAAGATTTAAAATGGGTTTCCATTTTTTTGCAATTTCATCAAATAATTTCTTGATAAATTGAAGCAAATTTCAATCTTGTTTTTCCTCATTTTCTTGCAATTGTTTGGTCATTTTTGGTCTTTTCTTCAATTAATTTATGTTTTATTAATTATTTTGAAATTTAATGTTGTGGGTCATATTCAATCAGTAGGATCTAGTGAAGCATTTAGGTGAAATTTCATTAAATTTCGTTATCAGGTGTATATCAATTGTGATGTGTAACAATTATTGTACTTTCTTTTTACTTTTTTCTGTGGAAATTTCAGTGTGACATTTAAGAGGATCATAAAGCACAAATCTACCGAGCAATTCTCAGGAATACCCTATGTCATGACTTTACTCAACAACCTTCTTTCTGCTTGGTAATTCCCTATTGCAATATTTTCCATTGGGTGATGATAAAGGTCGCAAGTTGCGACAATATTTAGTTGTCGCAATCTTACGTGTCGCAGTTTAATTGGTACATATAGGCGACACGTAGGCTATGAGTCATAATAATATTTTTACTATCAATGCAATATTTTTACTATAAAAATATGTAAATAAGGTAGTCGATATAAATAAGGAAATAAATTAGAATATTAAGATTTTCCTAGTTTTTTTTGAAACATTTAAAGTAGGATATATAAATTAAATATTTTATTTTCCAATTTAAATAATGACACATAAGCATGCCATGTCATCATTGTGACACGGCTTAAAGGTCGCATGTTATGACCTTTATCATTTTCGTTTTCCATTTTAATTTTATTTTCCCCTCAATTTAGTTGTAATATCTCTTACTTTTAATTGCATATTTTTAGTGATTATTACTTAAAAGTTGAATTTTATTATGTATATATATAAATAATTCATTAATGGGTTCCAAAAAAAAAAGAGTCAATTTTGTTGCAAAATGCAAATAAACCAATGAATAGTATGAATGATAGTTACATTTCTTGCATGTCATATTTATGAAATCCCAATAAATTGAAACTATTAAAATTCAACAATTTTTATCAACCAAAAGTTCACTAAAAGTAGAAATTTCTCTATCATGACCTCTAATTAGTAGGGTGAAATTAAAGAATTAATCAAATATTATTAATACTAATTAATTTTATGAACAATTGTAACAAAAAAAACAGGTATGGACTACCCTTTGTATCACCAAACAACATTTTAGTGACAACAATCAATGGAACTGGAGCAGTAATTGAGAGTGTATATGTGTTAGTTTTTCTAATATTAGCTCCTAAAAAAGAGAAGCTTAAGATTGGAGGTCTTCTTGCAATTATCCTCTCGATTTTCGCAACGGTGGCGCTTGTTTCAGTCCTTGCTCTTGATGGTAACAAGAGGAAGATTTTCTGTGGTGTTGCTGCTAGTGTTTTCTCTATCATCATGTATGGCTCCCCTCTTTCTATCATGGTAAGTCTAATTCTATCATTTCCTCTTTTATTTTCTTGTTATATTATTGTTATAAATGTGTATTGATTTAGTATGATGATAAGTAATTAATTTGTAAATTATTTCCTGAAATGGAATGTTGTTGGACCTCCCTAAATTCTGCCAATAATGGGGGTGACATTATTTGCTAGTTGTTGAATTTGGACTATAATTAGTACGTACTGCCTCCGTTTCAAATCATTTTTACACTTTTCGTTTTAGTCTGTACTGCCTCTGTTTCAAATAATTTTTACACTTTTCGTTTTAGTCTGTTTCACAATTTAAAACATTTTTGGATATGAAAATGTATCATCTTAACTCGAAAATTATTCATTATTTTTTATGTATTGTTTGTTACCTTTGCAACTAATGTAGTATGTAGGTAGACAAGGTAGTGACATTTAATGGAAAAGGATTTGATTGACTAGATTTGGGTCTTTGTTTTGTGCAATTAGCTTTGGTAATAATGTTTCATATGAAGATGATGATGATAAGGAGTTACTTAATTGAGGTTAATTAATTCTTAATAATGAATGCAGAGGTTGGTGATTAAGACGAAGAGTGTGGAGTACATGCCATTCTTGCTATCACTCTTCTGTTTCTTATGTGGTACTTCCTGGTTCATTTTCGGATTAATCGGCCGCGATCCTTTCGTTGCTGTAAGTATTTCATTAACACATTATCCCAGTTAATAATTTGTAATGTTACAAATTATGCATCTAATTGTATGAAATAACTGTCACAAACCAAGTTCATCATGTGATATGTTAGAAGTATGTAACAATGTAGGTATGTAGAAATTCATGTGATAGAAATTCCATCAAATTACATCTGAAAATGGAATGCTTTTCTATGCAAATCCCTAGCTGGATTCTTATTTATTGGTTGAAATAATTAACATGCACTGACACGGTAAAAATATGCCTTCAATAGTTTCCAAAACGTGCCGGACACACGACACGGTGAAACGTGTTTCGGGACTTATCCATGGTACCAAACTTTGATTCCCGTTTTCCCGTATCCGTTTCCCGTTTCTGTGCAACATAGTACGAAATTAACCTTCAAAAGTGGGGGTGGTTGTCTGTCACTATCCTTGAGCCAACAGTTTTCTAAAGCATGAATGTGGTCACTCAAATCCATTTTGTGCACTTCTGTTGCTTTGTTGTTTTCTGATCTTTACATTAGGCATTGCTCACAAGTCACCCGTACAAGTTGCATGCCTTTGTTCCGGTTTTCAAAACCGGTTTACATAACTATACACGGGTTTAGACAACGTGACAACTTTGAAAACCGGTTTACATAACTACGTTCGTGTATATATAGTGGTTTAGACAATGTGACAACTTATTCCGTACGAGGAGAATTCTTATAATCTTATGCTTAATGTTTTGGACAGGTACCAAATGGGTTTGGGAGTGCATTAGGAGCAATGCAACTAATCCTATACTTCATATACTATGACAAGAACAAGAATCCTGAGCAGAAAAAGAAAAGTGTAGCTGATCCTGAACAAGCAGTTGAATTGGGCCAAAGTGGAAATGGGAAGGCCCACAATAATATCCAAGATGGAAAGCCCAACACGCAAACTTCGTTAAATGGACACGTTTAATATTCTGCTACGTGTCACCTTGTGTTTAGCACAGCACATTGATTAAAATCTGATCCTCTGCAATTATTTTTTAGCCTTTTGTTTTTGTAGTTATCTTTCTTTTTCAGCTTTTTTTTTTTTTTTTTTTTGATTGGTTAGGTTTTGATTCTCTCGATTTCAAAAGTGTAAACATGTTTGTGTTGAGAAATGGCGAAAGATAGCCATTGTAACAAAGGGATGATACGGCCAATTGTAATAACGTTGTCAAGTGAATATAAATACGACCAATTGCAATAATGATGTTTAAAATTGACCGATAATTACCCGTGTTCGATCCCTCCAACAAACAATTGGGAGGCGACTGGAATCTATCC CTGTTCGCAAGTCCCACCTCTCAATTCCAAGCTCTCTCTTTCACTGTCTATATTTCTCTCTCCTCTGCTTCTCTATAAAAACGGCATTAGCATTTCCCAACTCCCACACTTTAAAACAATAATAATATCTCACTCTCTCTTTCTCTCTCATTTCTTTTCAACATTCGCAAAGAAACCCAGTTTATAATTCGACTGTATTATCTTCAAAATATTAACCAAAGATAACATCCTCTGTTCACCCCTGTTTTCAATTTCCCAGAAACATATAATCACAAAATGATGAATGTTGCTCATTTCATCTTCGGAGTTTTTGGAAATGCAACTGCTCTGTTTCTCTTCTTAGCACCAGTTGTGACATTTAAGAGGATCATAAAGCACAAATCTACCGAGCAATTCTCAGGAATACCCTATGTCATGACTTTACTCAACAACCTTCTTTCTGCTTGGTATGGACTACCCTTTGTATCACCAAACAACATTTTAGTGACAACAATCAATGGAACTGGAGCAGTAATTGAGAGTGTATATGTGTTAGTTTTTCTAATATTAGCTCCTAAAAAAGAGAAGCTTAAGATTGGAGGTCTTCTTGCAATTATCCTCTCGATTTTCGCAACGGTGGCGCTTGTTTCAGTCCTTGCTCTTGATGGTAACAAGAGGAAGATTTTCTGTGGTGTTGCTGCTAGTGTTTTCTCTATCATCATGTATGGCTCCCCTCTTTCTATCATGAGGTTGGTGATTAAGACGAAGAGTGTGGAGTACATGCCATTCTTGCTATCACTCTTCTGTTTCTTATGTGGTACTTCCTGGTTCATTTTCGGATTAATCGGCCGCGATCCTTTCGTTGCTGTACCAAATGGGTTTGGGAGTGCATTAGGAGCAATGCAACTAATCCTATACTTCATATACTATGACAAGAACAAGAATCCTGAGCAGAAAAAGAAAAGTGTAGCTGATCCTGAACAAGCAGTTGAATTGGGCCAAAGTGGAAATGGGAAGGCCCACAATAATATCCAAGATGGAAAGCCCAACACGCAAACTTCGTTAAATGGACACGTTTAATATTCTGCTACGTGTCACCTTGTGTTTAGCACAGCACATTGATTAAAATCTGATCCTCTGCAATTATTTTTTAGCCTTTTGTTTTTGTAGTTATCTTTCTTTTTCAGCTTTTTTTTTTTTTTTTTTTTGATTGGTTAGGTTTTGATTCTCTCGATTTCAAAAGTGTAAACATGTTTGTGTTGAGAAATGGCGAAAGATAGCCATTGTAACAAAGGGATGATACGGCCAATTGTAATAACGTTGTCAAGTGAATATAAATACGACCAATTGCAATAATGATGTTTAAAATTGACCGATAATTACCCGTGTTCGATCCCTCCAACAAACAATTGGGAGGCGACTGGAATCTATCC ATGATGAATGTTGCTCATTTCATCTTCGGAGTTTTTGGAAATGCAACTGCTCTGTTTCTCTTCTTAGCACCAGTTGTGACATTTAAGAGGATCATAAAGCACAAATCTACCGAGCAATTCTCAGGAATACCCTATGTCATGACTTTACTCAACAACCTTCTTTCTGCTTGGTATGGACTACCCTTTGTATCACCAAACAACATTTTAGTGACAACAATCAATGGAACTGGAGCAGTAATTGAGAGTGTATATGTGTTAGTTTTTCTAATATTAGCTCCTAAAAAAGAGAAGCTTAAGATTGGAGGTCTTCTTGCAATTATCCTCTCGATTTTCGCAACGGTGGCGCTTGTTTCAGTCCTTGCTCTTGATGGTAACAAGAGGAAGATTTTCTGTGGTGTTGCTGCTAGTGTTTTCTCTATCATCATGTATGGCTCCCCTCTTTCTATCATGAGGTTGGTGATTAAGACGAAGAGTGTGGAGTACATGCCATTCTTGCTATCACTCTTCTGTTTCTTATGTGGTACTTCCTGGTTCATTTTCGGATTAATCGGCCGCGATCCTTTCGTTGCTGTACCAAATGGGTTTGGGAGTGCATTAGGAGCAATGCAACTAATCCTATACTTCATATACTATGACAAGAACAAGAATCCTGAGCAGAAAAAGAAAAGTGTAGCTGATCCTGAACAAGCAGTTGAATTGGGCCAAAGTGGAAATGGGAAGGCCCACAATAATATCCAAGATGGAAAGCCCAACACGCAAACTTCGTTAAATGGACACGTTTAA MMNVAHFIFGVFGNATALFLFLAPVVTFKRIIKHKSTEQFSGIPYVMTLLNNLLSAWYGLPFVSPNNILVTTINGTGAVIESVYVLVFLILAPKKEKLKIGGLLAIILSIFATVALVSVLALDGNKRKIFCGVAASVFSIIMYGSPLSIMRLVIKTKSVEYMPFLLSLFCFLCGTSWFIFGLIGRDPFVAVPNGFGSALGAMQLILYFIYYDKNKNPEQKKKSVADPEQAVELGQSGNGKAHNNIQDGKPNTQTSLNGHV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21630.1 vs. NCBI nr
Match: gi|902167274|gb|KNA07354.1| (hypothetical protein SOVF_172760 [Spinacia oleracea]) HSP 1 Score: 501.5 bits (1290), Expect = 8.700e-139 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Spo21630.1 vs. NCBI nr
Match: gi|731313348|ref|XP_010679833.1| (PREDICTED: bidirectional sugar transporter SWEET1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 442.6 bits (1137), Expect = 4.800e-121 Identity = 231/259 (89.19%), Postives = 244/259 (94.21%), Query Frame = 1
BLAST of Spo21630.1 vs. NCBI nr
Match: gi|1021532897|ref|XP_016163420.1| (PREDICTED: bidirectional sugar transporter SWEET1 [Arachis ipaensis]) HSP 1 Score: 346.3 bits (887), Expect = 4.700e-92 Identity = 177/243 (72.84%), Postives = 206/243 (84.77%), Query Frame = 1
BLAST of Spo21630.1 vs. NCBI nr
Match: gi|702373946|ref|XP_010062171.1| (PREDICTED: bidirectional sugar transporter SWEET1-like [Eucalyptus grandis]) HSP 1 Score: 343.6 bits (880), Expect = 3.000e-91 Identity = 176/221 (79.64%), Postives = 196/221 (88.69%), Query Frame = 1
BLAST of Spo21630.1 vs. NCBI nr
Match: gi|848885994|ref|XP_012843240.1| (PREDICTED: bidirectional sugar transporter SWEET1-like [Erythranthe guttata]) HSP 1 Score: 343.6 bits (880), Expect = 3.000e-91 Identity = 174/247 (70.45%), Postives = 209/247 (84.62%), Query Frame = 1
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJC5_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_172760 PE=3 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 6.100e-139 Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 1
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZY5_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g010700 PE=3 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 3.400e-121 Identity = 231/259 (89.19%), Postives = 244/259 (94.21%), Query Frame = 1
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Match: A0A059BTG2_EUCGR (Bidirectional sugar transporter SWEET OS=Eucalyptus grandis GN=EUGRSUZ_F02749 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.100e-91 Identity = 176/221 (79.64%), Postives = 196/221 (88.69%), Query Frame = 1
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Match: A0A022QX61_ERYGU (Bidirectional sugar transporter SWEET OS=Erythranthe guttata GN=MIMGU_mgv1a012592mg PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.100e-91 Identity = 174/247 (70.45%), Postives = 209/247 (84.62%), Query Frame = 1
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Match: I1KAI8_SOYBN (Bidirectional sugar transporter SWEET OS=Glycine max PE=3 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 2.300e-90 Identity = 175/249 (70.28%), Postives = 206/249 (82.73%), Query Frame = 1
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Match: SWET1_ARATH (Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.000e-91 Identity = 176/252 (69.84%), Postives = 208/252 (82.54%), Query Frame = 1
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Match: SWT1A_SORBI (Bidirectional sugar transporter SWEET1a OS=Sorghum bicolor GN=SWEET1A PE=3 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 5.800e-82 Identity = 158/218 (72.48%), Postives = 188/218 (86.24%), Query Frame = 1
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Match: SWT1A_ORYSJ (Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.100e-80 Identity = 162/249 (65.06%), Postives = 192/249 (77.11%), Query Frame = 1
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Match: SWT1B_ORYSI (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 6.200e-76 Identity = 157/241 (65.15%), Postives = 184/241 (76.35%), Query Frame = 1
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Match: SWT1B_ORYSJ (Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica GN=SWEET1B PE=2 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.100e-75 Identity = 156/241 (64.73%), Postives = 184/241 (76.35%), Query Frame = 1
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Match: AT1G21460.1 (Nodulin MtN3 family protein) HSP 1 Score: 336.3 bits (861), Expect = 1.700e-92 Identity = 176/252 (69.84%), Postives = 208/252 (82.54%), Query Frame = 1
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Match: AT5G53190.1 (Nodulin MtN3 family protein) HSP 1 Score: 183.0 bits (463), Expect = 2.400e-46 Identity = 107/250 (42.80%), Postives = 147/250 (58.80%), Query Frame = 1
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Match: AT4G10850.1 (Nodulin MtN3 family protein) HSP 1 Score: 176.8 bits (447), Expect = 1.700e-44 Identity = 101/216 (46.76%), Postives = 139/216 (64.35%), Query Frame = 1
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Match: AT1G66770.1 (Nodulin MtN3 family protein) HSP 1 Score: 176.0 bits (445), Expect = 3.000e-44 Identity = 107/261 (41.00%), Postives = 156/261 (59.77%), Query Frame = 1
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Match: AT5G62850.1 (Nodulin MtN3 family protein) HSP 1 Score: 174.9 bits (442), Expect = 6.600e-44 Identity = 99/236 (41.95%), Postives = 141/236 (59.75%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21630.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21630.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21630.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21630.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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