Spo21681 (gene) | SpinachBase

Overview


Name	Spo21681
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Ferredoxin/thioredoxin reductase subunit A (Variable subunit) 1) (Similarity to ferredoxin-thioredoxin reductase variable chain)
Location	chr2 : 56657055 .. 56657561 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCAGCAACAGCAGCATCAACCGCAACCGCAACGGCGGCGGCGACGGCGAGAATACCACTCTTCCTAAGCCGCAACAACTCATCGGCCACCGTCTGCAGCACCCTGAGGTGCAGAACAATAACACGAACAAGAACCAGAGAAAGACTAGCAATCTGCTGTGAAGTAGCTTTGAAATCGGATTCTTCAACCGGGTTCGATTCATCATCATCATCATCACCTCCAGAAGAAGACGAGGAATTGAAGAAGAATCTGGAGAAAGTTGGATGCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTGAAGTTGAATTAACCCCAGATATGGTTGGGGTTATTAAGCAGTATGTTGGATTCTGGAAAGGGAAATACATTTCCCCTAATTATCCTTTCAAAGTTGAGTACCGCATCGATGTCCCTGACCGTGGTTCTGTCAAATTAGTTGTTCATCTTAAAGAAGAAGAATTCGAAATCATAGCAGAGTAG

mRNA sequence

ATGTCATCAGCAACAGCAGCATCAACCGCAACCGCAACGGCGGCGGCGACGGCGAGAATACCACTCTTCCTAAGCCGCAACAACTCATCGGCCACCGTCTGCAGCACCCTGAGGTGCAGAACAATAACACGAACAAGAACCAGAGAAAGACTAGCAATCTGCTGTGAAGTAGCTTTGAAATCGGATTCTTCAACCGGGTTCGATTCATCATCATCATCATCACCTCCAGAAGAAGACGAGGAATTGAAGAAGAATCTGGAGAAAGTTGGATGCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTGAAGTTGAATTAACCCCAGATATGGTTGGGGTTATTAAGCAGTATGTTGGATTCTGGAAAGGGAAATACATTTCCCCTAATTATCCTTTCAAAGTTGAGTACCGCATCGATGTCCCTGACCGTGGTTCTGTCAAATTAGTTGTTCATCTTAAAGAAGAAGAATTCGAAATCATAGCAGAGTAG

Coding sequence (CDS)

ATGTCATCAGCAACAGCAGCATCAACCGCAACCGCAACGGCGGCGGCGACGGCGAGAATACCACTCTTCCTAAGCCGCAACAACTCATCGGCCACCGTCTGCAGCACCCTGAGGTGCAGAACAATAACACGAACAAGAACCAGAGAAAGACTAGCAATCTGCTGTGAAGTAGCTTTGAAATCGGATTCTTCAACCGGGTTCGATTCATCATCATCATCATCACCTCCAGAAGAAGACGAGGAATTGAAGAAGAATCTGGAGAAAGTTGGATGCAAGGTTAAGGTGAAATCCCCTCTTAAAGTCTACCATGTTCCTAAATTACCTGAAGTTGAATTAACCCCAGATATGGTTGGGGTTATTAAGCAGTATGTTGGATTCTGGAAAGGGAAATACATTTCCCCTAATTATCCTTTCAAAGTTGAGTACCGCATCGATGTCCCTGACCGTGGTTCTGTCAAATTAGTTGTTCATCTTAAAGAAGAAGAATTCGAAATCATAGCAGAGTAG

Protein sequence

MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21681.1	Spo21681.1	mRNA

Homology

[Close]

BLAST of Spo21681.1 vs. NCBI nr
Match: gi|505186|emb|CAA54407.1| (ferredoxin-thioredoxin reductase SU A [Spinacia oleracea])

HSP 1 Score: 316.6 bits (810), Expect = 2.600e-83
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


		  
Query: 1   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK 60
           MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK
Sbjct: 8   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK 67

Query: 61  SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 120
           SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI
Sbjct: 68  SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 127

Query: 121 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 169
           KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE
Sbjct: 128 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 175

[Close]

BLAST of Spo21681.1 vs. NCBI nr
Match: gi|729538|sp|P38365.2|FTRV_SPIOL (RecName: Full=Ferredoxin-thioredoxin reductase, variable chain, chloroplastic; Short=FTR-V; AltName: Full=Ferredoxin-thioredoxin reductase subunit A; Short=FTR-A; Flags: Precursor)

HSP 1 Score: 308.5 bits (789), Expect = 7.000e-81
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 1


		  
Query: 1   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK 60
           MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTR RLAICCEVALK
Sbjct: 8   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRARLAICCEVALK 67

Query: 61  SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 120
           SDSSTGFDSSSSS PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI
Sbjct: 68  SDSSTGFDSSSSS-PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 127

Query: 121 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 169
           KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE
Sbjct: 128 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 174

[Close]

BLAST of Spo21681.1 vs. NCBI nr
Match: gi|731312935|ref|XP_010677104.1| (PREDICTED: ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.1 bits (362), Expect = 2.300e-31
Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 1


		  
Query: 1   MSSATAASTATATA--AATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVA 60
           M++ TAA   +A    ++ A  P  LS     AT+ +TL   T T T+T +  +I C+VA
Sbjct: 1   MTTTTAAPLISAALPISSAAPQPRILSLRRI-ATIPTTLTFPT-TLTKTPKTPSIRCDVA 60

Query: 61  LKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVG 120
           L+SD+S             E+EELK NL+KVG +V+VK+PLKV+HVPKLPEVELTP+M G
Sbjct: 61  LQSDTSIS---------ASEEEELKSNLDKVGSRVRVKAPLKVHHVPKLPEVELTPEMEG 120

Query: 121 VIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 167
           VIKQYVGFW+GK +S NYPFKV++ ID+ DRG VK  VHL+E+EFEII
Sbjct: 121 VIKQYVGFWQGKRLSANYPFKVQFSIDIEDRGKVKFFVHLREDEFEII 157

[Close]

BLAST of Spo21681.1 vs. NCBI nr
Match: gi|645229264|ref|XP_008221385.1| (PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like, partial [Prunus mume])

HSP 1 Score: 116.3 bits (290), Expect = 5.100e-23
Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 1


		  
Query: 53  ICCEVALKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVEL 112
           I CEVA +SDSS+   S SSS+     +E   +  K+G +VKVK PLKVYHVP++PE+E+
Sbjct: 28  ISCEVATRSDSSSPSSSYSSSADVTSSDEAVAS-SKIGARVKVKVPLKVYHVPRVPELEI 87

Query: 113 TPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 167
           T  M G +KQYVG WKGK IS N P+KV++ +DV  RG+VK   HLKE+EFE +
Sbjct: 88  T-GMEGELKQYVGLWKGKRISANLPYKVQFVVDVEGRGAVKFFAHLKEDEFEYL 139

[Close]

BLAST of Spo21681.1 vs. NCBI nr
Match: gi|225463817|ref|XP_002271306.1| (PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Vitis vinifera])

HSP 1 Score: 115.9 bits (289), Expect = 6.700e-23
Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 1


		  
Query: 25  SRNNSSATVCSTLRCRTITRTRTRERLAICCEVALKSDSSTGFDSSSSSSPPEEDEELKK 84
           S ++SS  VCS     +    R R    I CEVAL+SDS+T   SSSS++  +  E+  +
Sbjct: 30  SSSSSSLDVCSVKSPSSAVVHRRRR--TISCEVALRSDSAT---SSSSAAFEQVQEDAAE 89

Query: 85  NLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRI 144
              K+G +V+VK PLKV+HVP++PEV+LT  M GV+KQYVG WKGK IS N PFK+ +  
Sbjct: 90  EAGKIGARVRVKVPLKVFHVPRVPEVDLT-GMEGVLKQYVGVWKGKRISANLPFKIGFVA 149

Query: 145 DVPDRGSVKLVVHLKEEEFEII 167
           D+  RG VK   HLK++EFE +
Sbjct: 150 DIEGRGPVKFFAHLKDDEFEYV 165

[Close]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_071800 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.900e-81
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 1


		  
Query: 1   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK 60
           MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTR RLAICCEVALK
Sbjct: 8   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRARLAICCEVALK 67

Query: 61  SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 120
           SDSSTGFDSSSSS PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI
Sbjct: 68  SDSSTGFDSSSSS-PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 127

Query: 121 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 169
           KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE
Sbjct: 128 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 174

[Close]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FW73_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009730 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.600e-31
Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 1


		  
Query: 1   MSSATAASTATATA--AATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVA 60
           M++ TAA   +A    ++ A  P  LS     AT+ +TL   T T T+T +  +I C+VA
Sbjct: 1   MTTTTAAPLISAALPISSAAPQPRILSLRRI-ATIPTTLTFPT-TLTKTPKTPSIRCDVA 60

Query: 61  LKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVG 120
           L+SD+S             E+EELK NL+KVG +V+VK+PLKV+HVPKLPEVELTP+M G
Sbjct: 61  LQSDTSIS---------ASEEEELKSNLDKVGSRVRVKAPLKVHHVPKLPEVELTPEMEG 120

Query: 121 VIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 167
           VIKQYVGFW+GK +S NYPFKV++ ID+ DRG VK  VHL+E+EFEII
Sbjct: 121 VIKQYVGFWQGKRLSANYPFKVQFSIDIEDRGKVKFFVHLREDEFEII 157

[Close]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Match: A5B8T4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0071g01160 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.700e-23
Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 1


		  
Query: 25  SRNNSSATVCSTLRCRTITRTRTRERLAICCEVALKSDSSTGFDSSSSSSPPEEDEELKK 84
           S ++SS  VCS     +    R R    I CEVAL+SDS+T   SSSS++  +  E+  +
Sbjct: 30  SSSSSSLDVCSVKSPSSAVVHRRRR--TISCEVALRSDSAT---SSSSAAFEQVQEDAAE 89

Query: 85  NLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRI 144
              K+G +V+VK PLKV+HVP++PEV+LT  M GV+KQYVG WKGK IS N PFK+ +  
Sbjct: 90  EAGKIGARVRVKVPLKVFHVPRVPEVDLT-GMEGVLKQYVGVWKGKRISANLPFKIGFVA 149

Query: 145 DVPDRGSVKLVVHLKEEEFEII 167
           D+  RG VK   HLK++EFE +
Sbjct: 150 DIEGRGPVKFFAHLKDDEFEYV 165

[Close]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Match: D7M1C1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_325438 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.600e-21
Identity = 62/121 (51.24%), Postives = 79/121 (65.29%), Query Frame = 1


		  
Query: 46  RTRERLAICCEVALKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVP 105
           R   R  I C++A+KS +S   D+  SSS   E EE +K  EK+G +V+V  PLKVYHV 
Sbjct: 356 RKNPRSTIRCDIAVKSAASVDADADLSSSTSLETEEDEKAKEKIGARVRVTVPLKVYHVV 415

Query: 106 KLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEI 165
           ++PEVEL   M G IK YV  WKGK IS N PFKV++  ++  RG VK   HLKE+EFE+
Sbjct: 416 RVPEVELM-GMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLKEDEFEL 475

Query: 166 I 167
           I
Sbjct: 476 I 475

[Close]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Match: W9RQM9_9ROSA (Ferredoxin-thioredoxin reductase, variable chain OS=Morus notabilis GN=L484_011027 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.700e-21
Identity = 75/174 (43.10%), Postives = 103/174 (59.20%), Query Frame = 1


		  
Query: 1   MSSATAASTATATAAA--TARIPLFLSRNNSSATVCSTLR-CRTITRTRTRERLAICCEV 60
           MS+AT    ++   A    A  P F+S ++S + +  +L  C+         R  I CEV
Sbjct: 1   MSTATVGLLSSTDHAMILAAMKPSFISSSSSCSCLSVSLSPCKISPFATATRRRRISCEV 60

Query: 61  ALKSDSSTG-----FDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVEL 120
           A+KSDS+T      F  S SSSP   D+E      ++G +V+VK PLKVYHVPK+PE+++
Sbjct: 61  AIKSDSATSPSSSEFSESPSSSPGTADDE--TGGARIGARVRVKVPLKVYHVPKVPEIDI 120

Query: 121 TPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 167
              M G +KQYVG WKGK IS N P+KV++  +V  RG VK   HLKE+EFE +
Sbjct: 121 L-GMEGELKQYVGVWKGKRISANLPYKVQFLTEVEGRGKVKFFAHLKEDEFEYV 171

[Close]

BLAST of Spo21681.1 vs. ExPASy Swiss-Prot
Match: FTRV_SPIOL (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea GN=FTRV PE=1 SV=2)

HSP 1 Score: 308.5 bits (789), Expect = 4.400e-83
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 1


		  
Query: 1   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVALK 60
           MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTR RLAICCEVALK
Sbjct: 8   MSSATAASTATATAAATARIPLFLSRNNSSATVCSTLRCRTITRTRTRARLAICCEVALK 67

Query: 61  SDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 120
           SDSSTGFDSSSSS PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI
Sbjct: 68  SDSSTGFDSSSSS-PPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVI 127

Query: 121 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 169
           KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE
Sbjct: 128 KQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEIIAE 174

[Close]

BLAST of Spo21681.1 vs. ExPASy Swiss-Prot
Match: FTRV_MAIZE (Ferredoxin-thioredoxin reductase, variable chain OS=Zea mays PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.700e-14
Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 1


		  
Query: 88  KVGCKVKVKSPLKVYHVPKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVP 147
           K+G +V+V +PL+VYHV K P++++   M GV+KQYV  WKGK ++ N+PFKVE+ + V 
Sbjct: 17  KIGRRVRVTAPLRVYHVLKAPDLDIQ-GMEGVVKQYVCVWKGKRVTANFPFKVEFELAVE 76

Query: 148 DRGS-VKLVVHLKEEEFEII 167
            +   V+   HL+E+EFE +
Sbjct: 77  GQPKPVRFFAHLREDEFEFV 95

[Close]

BLAST of Spo21681.1 vs. TAIR (Arabidopsis)
Match: AT5G08410.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)

HSP 1 Score: 109.0 bits (271), Expect = 2.900e-24
Identity = 61/122 (50.00%), Postives = 80/122 (65.57%), Query Frame = 1


		  
Query: 45  TRTRERLAICCEVALKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHV 104
           +R   +  I C++A+KS +S   D+  SSS   E EE +K  EK+G +V+V  PLKVYHV
Sbjct: 62  SRKNPKSTIRCDIAVKSAASVDADADLSSSTSLETEEDEKAKEKIGARVRVTVPLKVYHV 121

Query: 105 PKLPEVELTPDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFE 164
            ++PEVEL   M G IK YV  WKGK IS N PFKV++  ++  RG VK   HLKE+EFE
Sbjct: 122 VRVPEVELM-GMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLKEDEFE 181

Query: 165 II 167
           +I
Sbjct: 182 LI 182

[Close]

BLAST of Spo21681.1 vs. TAIR (Arabidopsis)
Match: AT5G23440.1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)

HSP 1 Score: 102.8 bits (255), Expect = 2.100e-22
Identity = 70/168 (41.67%), Postives = 98/168 (58.33%), Query Frame = 1


		  
Query: 4   ATAASTATATAAA-----TARIPLFLSRNNSSATVCSTLRCRTITRTRTRERLAICCEVA 63
           + +A+TATAT  A      A + LF S++    +            +R   R  I C+VA
Sbjct: 25  SASATTATATPMALKSCIVAPLSLFTSQSQIKHS-----------SSRKTSRTTIRCDVA 84

Query: 64  LKSDSSTGFDSSSSSSPPEEDEELKKNLEKVGCKVKVKSPLKVYHVPKLPEVELTPDMVG 123
           +KS  S   D++ SSSP  E+E   +   K+G +V+V +PLKVYHV ++PEV+L   M G
Sbjct: 85  IKSADSINADANPSSSPSSEEEIEAEAKAKIGSRVRVTAPLKVYHVNRVPEVDL-EGMEG 144

Query: 124 VIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII 167
            +K YV  WKGK IS N P+K+E+  ++  RG VK V HLKE+EFE I
Sbjct: 145 KLKDYVAVWKGKRISANLPYKIEFFKEIEGRGLVKFVSHLKEDEFEFI 180

The following BLAST results are available for this feature:

BLAST of Spo21681.1 vs. NCBI nr
BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
BLAST of Spo21681.1 vs. ExPASy Swiss-Prot
BLAST of Spo21681.1 vs. TAIR (Arabidopsis)

BLAST of Spo21681.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|505186\|emb\|CAA54407.1\|	2.6e-83	100.	ferredoxin-thioredoxin reducta...	[more]
gi\|729538\|sp\|P38365.2\|FTRV_SPIOL	7.0e-81	98.8	RecName: Full=Ferredoxin-thior...	[more]
gi\|731312935\|ref\|XP_010677104.1\|	2.3e-31	53.5	PREDICTED: ferredoxin-thioredo...	[more]
gi\|645229264\|ref\|XP_008221385.1\|	5.1e-23	54.3	PREDICTED: ferredoxin-thioredo...	[more]
gi\|225463817\|ref\|XP_002271306.1\|	6.7e-23	48.5	PREDICTED: ferredoxin-thioredo...	[more]

BLAST of Spo21681.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RFR1_SPIOL	4.9e-81	98.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8FW73_BETVU	1.6e-31	53.5	Uncharacterized protein OS=Bet...	[more]
A5B8T4_VITVI	4.7e-23	48.5	Putative uncharacterized prote...	[more]
D7M1C1_ARALL	2.6e-21	51.2	Putative uncharacterized prote...	[more]
W9RQM9_9ROSA	5.7e-21	43.1	Ferredoxin-thioredoxin reducta...	[more]

BLAST of Spo21681.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
FTRV_SPIOL	4.4e-83	98.8	Ferredoxin-thioredoxin reducta...	[more]
FTRV_MAIZE	5.7e-14	46.2	Ferredoxin-thioredoxin reducta...	[more]

BLAST of Spo21681.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G08410.1	2.9e-24	50.0	ferredoxin/thioredoxin reducta...	[more]
AT5G23440.1	2.1e-22	41.6	ferredoxin/thioredoxin reducta...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003698	Lipoyl synthase	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 40..166 score: 6.4
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PRODOM	PD015034		coord: 89..166 score: 1.0
IPR004207	Ferredoxin thioredoxin reductase, alpha chain	PFAM	PF02941	FeThRed_A	coord: 89..162 score: 4.0
IPR008990	Electron transport accessory protein-like domain	unknown	SSF50090	Electron transport accessory proteins	coord: 88..166 score: 4.24
None	No IPR available	GENE3D	2.30.30.50		coord: 88..166 score: 3.6
None	No IPR available	PANTHER	PTHR10949:SF11	SUBFAMILY NOT NAMED	coord: 40..166 score: 6.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19752	0.67	Barchart \| Table