Spo21724 (gene) | SpinachBase

Overview


Name	Spo21724
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	chr2 : 56002517 .. 56006392 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGGAAGGTGAAGTTGGGTTGTTGGTCACCATCTAAAAACCCAACTTCACCTTCCTCAATCTCTTATCCTTCAAACCTCACCTCTTTCTTCATCTTGAGGTTAAAAACTCGATTTCCCGTACCCATAAAAATGACATTATTCCAATCAATTAAACTCGAATTCTCTTGCATTAGCTCGTCAAAAACACTCAAATAGCACAATAACATACAACTTTTCTACCACTGAGGTCTTAGCCTATCGGTTAAGATTGAGAGTCTGTAATTTGCATTGCAGTTGTGGCCTGCCGCCTGTGGGCCTGTGGCCATTCGCGCCAGGCAAAAATAACATACAACTTTTCTACAACTGAGCTGGTCTTAGCTGAGTGGTTAAAATTGATGGTTTGTGTACGATAGGTCTCAATTTCTAATCCTCCGCCTTCTTTTATAATTTGCATTGCCGTTGTGGCTCATTTCGCTATGGGGATTCCTAGTCATGTTCCGTTTTCAACGTCGAGATTAATATCTGGTGTACCTCGAGAACAAGATGGAGTCGTTACAAACGATCAAATAAGGCCTATAAGAGAAATCTCATTCGTTGTACGGATGGCAATGAGAGTATCGAGAGCAAAGTGGTTTACGTTCCTTAGAAGGGTTTTTCATTACCAAAATGGAACAAGATCTCACCTAGGAGATAACCCTTTTAATTTGTGTGGTTGGATGATGCTTGAATTTGTAGCACTTTTGGTACAAATTTGTGTTACTTCGATTACTTTATTTGTTTCTAAGGAAGAAAGGCCTGTTTGGCCTATGAGAATATGGGTTGTTGGGTATGATTTTGGTTGTGTTGTGAGTCTTCTTATCTTGTGTTGGAGGTATAGACATTATCATTTGGGAGGAGGAGATGATGGGGTGAATTTTCCTGATTTGGAACAGCAAAGAGACAATGAAGAATCAAGGTAATATTTAATTACTTACTATGTTCCACAATTTGTGTACCACTTGTGCGTTTCTTCTTTCAGTTGGCTTATTATTTTAAGTGATCAACTTTGATGAAATAACATGCATGGTCACCTTTAGACCTAGTTATTGGGTGGGTTGGGTCAGGGTCGGTGCAGGTTAAAGTGGGTCGGTTAATAAAAGGGTTATTTTTAGTGGGTCAATAATGGACTGGTCAAATAGGGTCACGAGCATGTAATGGGAAGGTCAATAAAAGAACAAGGAAAAATGAAAAAAAAAAGTCGTATGCAAGTACAAGTGATTACGAAGCTCTACGCATAACTTCGTATATTTCATGTCATAACTATTTTAGTTTTCAAAATTATTGTGTTATAAGTTCAATAAAAGTCTCGTCCAATAAAAGGCATGCCCATCACAACCCTATTAACTTCTAACCCTATATGGCTATATATACTCAATCATTGGGTTACTCTATCCAATAACCAGGTCTAGTCACCTTAGGTAACACATGAACTCATTAATACATCAGTGAAAGTATGTAATTAGTACGTGATCTGAGGATCTTTACCGTTGAACCAATTAAAGTCATTTTTAGGTCCATCTTCTCACAAGGTATATACAAGCACATTAGTAAAGAAATAGTCTCGATTGCACCATACACAACATAAAATGAACCGGTTATACATACCTACAAAATTATCAATGTGATGCCCCAACGTGATATTTTAGTTCATAAAGCATGAAAAAACACATTTTAAGACAATTGATCATGTCTAACAAAACCATCCTATTTTCTGGAACAGGGGTTTGCATTTTGTGAACAAATGCAAGGCATCACTAGACTTAATCTTTGCACTATGGTTTGTAATGGGAAATGTATGGGTTTTCGACTCGCGATTCGGATCCTTAAACGGAGCTCCGAAGCTTCACATCCTTTGCATAACCATATTGTTTTGGAATGCCATAACATATTCCTTTCCTTTCCTTCTTTTTATTCTGTTCTGTATTTGTGTTCCATTAATCAGTAGCTGCATTGGCTATAATATGAACTTGGGTTCTGCTGAAAAGGGGGCTTCTGATGATCAAATTTCTCAGTTACATTGCTGGAAATTTAAATTGGTTGATACCAGTTTTGATGCTGGAAATTCCTCCCCTGCTAAGGACAATCCAGTAAGTTCATTTACCTCCTTAAACTAATCATTTAAATGATAATTTTCCTATTTTTTGTGATTTTTATTTTATTTTTAAGAAAATAACTCTACGTTTTATAATCGTATAAAATGACATTTTTTTAGTATTTCCCCTACAAAAATAACTTATAATTAAGGCTTTGTTCAAGTTCAAATAAGTTCATTTAGGTTCAAATCAATTCATTTAAGTTCAAATCAGTTCACATATGTTTAGTTACGTTCAGGTAACATAAGTTCGGAATCAGTTAAATTCAGGTAATATAAGTTCAGAAAATATAATTTTCTAGACATTTCCACTTAAAATAAGTTTATTTCAAAGACAAAATAAATTTTTTAAGATAAAATAAGTACATAAGGTCAGTTAAGTTCAGATAAGTTTAGATAATATAAGTTCAGACAAAATAAGTCAATAGAACGGAGTCGGAGCCTAAGTTGTGAATCTTGTGATTGGCACAATTTTTTTAAAAAAAAAATTCATACGTTGTGTCCGGTTCACCTTATTTCCACTTATAAGTTCAAATAATCAACCGAGATAGTTAAGATAAGGACTGACAAATTCAATTGGCGATTCAAATAAGCTATAATAAGTTTACATAAGTAAAATCGGGTGACTATAATAGAATACCTCTTACTATGTTAATTTACCCTTACTCCCATTAATTAATTTCTTTTAAAAGGACAACCTTTGATATTCTTGTATGTAAAGGGAAAAGTAAGAATTTCAATAACACTTCGTCTTACTAAATCAAAGTCTTAAAATTTTATCATTTCTATGAGTAAGTATTGAGTAACATTTTAATGTTTTTCATTCAAATTAAACTTTTATTAAAGTCGTATTTTAAAATCACTAAAGTTGACCTACACACTCTTTTCTCGTAAAAGTTACTATGTTGAATTTTGAAAATCACTAAAATTGCTTGATATACTTTTTTTTTTTTCTCAAAAAGTTACTATTTTCGTCTCTTTACGTTTTTCTTTTTTAGTGTCTCAAAATGTTCTTTGCATTTCTTTTTATGTTGTCACATAAATGATTTAATATTCTATCAAGATTTGAGTCTATGATTATTTTAACAAATTAAATTCATTGGTTCATTTAACTTCTCACACTTTTCCATTGGGACATTAAAATTTTCTCATTTTTTCAATATCAGAATTTTGTTAAAAGTAAAACATTATAAATAAACGTAATTTGCCTTATTTGAATAAAAAAAAATAGAGGAATCTCAATGCATATTAATTAGTCGTTAAAACGCGTGCAAAATATCAAATGTAAAGAATAAAAAGAGACGGGATACTACGTAGTGTACTATGTTTGCGTTTTGAAAATCGCCAAAGTTACACGCACAATCTTTAATTTCTTAATTAATCTCGCAGGAATGTTGTATATGCTTGACAAAATACAAGGACAAAGAAGAGATAAGGCAATTACCATGTTCACATATTTTCCACAAGAAATGTGTGGACCAATGGCTCACGATTATATCATGTTGTCCTTTATGTAAACAAGGTTTAGATCGATAGGTATACATAGTATTAGGTAAACCGTTCAAAGATTATGAATTGGGTTTACGATTATATTGTACAGCTTGTAACTATATATACGTAGTACGAAGTACGGAGTATATTGTAATATAAAAACGAATACAATGAGTTTTTTACATTCATGTATGGAGGATAGTTTTTCACAAGAAAATTATGAACGTTAGGATATGATCACGAAATCCATACAAATTTAATGTGATTTTAAA

mRNA sequence

CAAAGGAAGGTGAAGTTGGGTTGTTGGTCACCATCTAAAAACCCAACTTCACCTTCCTCAATCTCTTATCCTTCAAACCTCACCTCTTTCTTCATCTTGAGGTTAAAAACTCGATTTCCCGTACCCATAAAAATGACATTATTCCAATCAATTAAACTCGAATTCTCTTGCATTAGCTCGTCAAAAACACTCAAATAGCACAATAACATACAACTTTTCTACCACTGAGGTCTTAGCCTATCGGTTAAGATTGAGAGTCTGTAATTTGCATTGCAGTTGTGGCCTGCCGCCTGTGGGCCTGTGGCCATTCGCGCCAGGCAAAAATAACATACAACTTTTCTACAACTGAGCTGGTCTTAGCTGAGTGGTTAAAATTGATGGTTTGTGTACGATAGGTCTCAATTTCTAATCCTCCGCCTTCTTTTATAATTTGCATTGCCGTTGTGGCTCATTTCGCTATGGGGATTCCTAGTCATGTTCCGTTTTCAACGTCGAGATTAATATCTGGTGTACCTCGAGAACAAGATGGAGTCGTTACAAACGATCAAATAAGGCCTATAAGAGAAATCTCATTCGTTGTACGGATGGCAATGAGAGTATCGAGAGCAAAGTGGTTTACGTTCCTTAGAAGGGTTTTTCATTACCAAAATGGAACAAGATCTCACCTAGGAGATAACCCTTTTAATTTGTGTGGTTGGATGATGCTTGAATTTGTAGCACTTTTGGTACAAATTTGTGTTACTTCGATTACTTTATTTGTTTCTAAGGAAGAAAGGCCTGTTTGGCCTATGAGAATATGGGTTGTTGGGTATGATTTTGGTTGTGTTGTGAGTCTTCTTATCTTGTGTTGGAGGTATAGACATTATCATTTGGGAGGAGGAGATGATGGGGTGAATTTTCCTGATTTGGAACAGCAAAGAGACAATGAAGAATCAAGGGGTTTGCATTTTGTGAACAAATGCAAGGCATCACTAGACTTAATCTTTGCACTATGTAGCTGCATTGGCTATAATATGAACTTGGGTTCTGCTGAAAAGGGGGCTTCTGATGATCAAATTTCTCAGTTACATTGCTGGAAATTTAAATTGGTTGATACCAGTTTTGATGCTGGAAATTCCTCCCCTGCTAAGGACAATCCAGAATGTTGTATATGCTTGACAAAATACAAGGACAAAGAAGAGATAAGGCAATTACCATGTTCACATATTTTCCACAAGAAATGTGTGGACCAATGGCTCACGATTATATCATGTTGTCCTTTATGTAAACAAGGTTTAGATCGATAGGTATACATAGTATTAGGTAAACCGTTCAAAGATTATGAATTGGGTTTACGATTATATTGTACAGCTTGTAACTATATATACGTAGTACGAAGTACGGAGTATATTGTAATATAAAAACGAATACAATGAGTTTTTTACATTCATGTATGGAGGATAGTTTTTCACAAGAAAATTATGAACGTTAGGATATGATCACGAAATCCATACAAATTTAATGTGATTTTAAA

Coding sequence (CDS)

ATGGGGATTCCTAGTCATGTTCCGTTTTCAACGTCGAGATTAATATCTGGTGTACCTCGAGAACAAGATGGAGTCGTTACAAACGATCAAATAAGGCCTATAAGAGAAATCTCATTCGTTGTACGGATGGCAATGAGAGTATCGAGAGCAAAGTGGTTTACGTTCCTTAGAAGGGTTTTTCATTACCAAAATGGAACAAGATCTCACCTAGGAGATAACCCTTTTAATTTGTGTGGTTGGATGATGCTTGAATTTGTAGCACTTTTGGTACAAATTTGTGTTACTTCGATTACTTTATTTGTTTCTAAGGAAGAAAGGCCTGTTTGGCCTATGAGAATATGGGTTGTTGGGTATGATTTTGGTTGTGTTGTGAGTCTTCTTATCTTGTGTTGGAGGTATAGACATTATCATTTGGGAGGAGGAGATGATGGGGTGAATTTTCCTGATTTGGAACAGCAAAGAGACAATGAAGAATCAAGGGGTTTGCATTTTGTGAACAAATGCAAGGCATCACTAGACTTAATCTTTGCACTATGTAGCTGCATTGGCTATAATATGAACTTGGGTTCTGCTGAAAAGGGGGCTTCTGATGATCAAATTTCTCAGTTACATTGCTGGAAATTTAAATTGGTTGATACCAGTTTTGATGCTGGAAATTCCTCCCCTGCTAAGGACAATCCAGAATGTTGTATATGCTTGACAAAATACAAGGACAAAGAAGAGATAAGGCAATTACCATGTTCACATATTTTCCACAAGAAATGTGTGGACCAATGGCTCACGATTATATCATGTTGTCCTTTATGTAAACAAGGTTTAGATCGATAG

Protein sequence

MGIPSHVPFSTSRLISGVPREQDGVVTNDQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNEESRGLHFVNKCKASLDLIFALCSCIGYNMNLGSAEKGASDDQISQLHCWKFKLVDTSFDAGNSSPAKDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCKQGLDR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21724.1	Spo21724.1	mRNA

Homology

[Close]

BLAST of Spo21724.1 vs. NCBI nr
Match: gi|920711019|gb|KOM52268.1| (hypothetical protein LR48_Vigan09g092700 [Vigna angularis])

HSP 1 Score: 336.3 bits (861), Expect = 5.100e-89
Identity = 151/246 (61.38%), Postives = 191/246 (77.64%), Query Frame = 1

		  
Query: 38  SFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSI 97
           SF+ R+AMRVSR++WFTFLRRVFHYQNG RS LG NPFN   WMMLE +ALLVQI  T++
Sbjct: 24  SFMTRVAMRVSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLVQITSTTL 83

Query: 98  TLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNE 157
           TL +SK E+P+WPMR+W+ GYD GC+++LL+LC RY   H+  G   +   DLEQQR++E
Sbjct: 84  TLAISKSEKPIWPMRVWIAGYDIGCLLNLLLLCGRYYQLHVTQG-GSLTLSDLEQQRNSE 143

Query: 158 ES---RGLHFVNKCKASLDLIFALCSCIGYNMNLGSAEKGASDDQISQLHCWKFKLVDTS 217
           ES   RG H ++KC++SL+L FA+C+ +GYNM++GS+ +GASDDQISQ+  W++K   T+
Sbjct: 144 ESSVLRGSHLMDKCRSSLELFFAICTLLGYNMSMGSSARGASDDQISQIPSWRYKGAHTN 203

Query: 218 FDAGNSSPA-----KDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLC 276
            D  N S        D+PECCICL KYKD+EE+RQLPCSH+FH KCVDQWL IISCCPLC
Sbjct: 204 LDFANDSQTTQRLINDDPECCICLAKYKDREEVRQLPCSHLFHLKCVDQWLRIISCCPLC 263

[Close]

BLAST of Spo21724.1 vs. NCBI nr
Match: gi|1021551701|ref|XP_016167207.1| (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase At4g11680-like [Arachis ipaensis])

HSP 1 Score: 315.5 bits (807), Expect = 9.400e-83
Identity = 157/292 (53.77%), Postives = 197/292 (67.47%), Query Frame = 1

		  
Query: 16  SGVPREQDGVVTNDQIRPIREIS---FVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGD 75
           S     +D  V + + RP+   S   F+V+ AMRVSRA+WFTFLRRVFHYQNG+RS+LG 
Sbjct: 26  SAAAAAEDSRVNSTRNRPLPRASPPSFLVQTAMRVSRARWFTFLRRVFHYQNGSRSNLGS 85

Query: 76  NPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWR 135
           NPFN   WMM+EF+AL+VQI   + TL +SK+ERPVWPMRIW  GYD GC ++LL+L  R
Sbjct: 86  NPFNTRTWMMMEFIALVVQIITITFTLAISKKERPVWPMRIWSAGYDIGCFLNLLLLYGR 145

Query: 136 YRHYHLGGGDDGVNFPDLEQQRDNEES---RGLHFVNKCKASLDLIFAL----------- 195
           YR      G D ++F D+EQQR+NEE+   R  H +NKC+ SL+L FA+           
Sbjct: 146 YRQICATQG-DVLSFSDIEQQRNNEETSVYRISHLMNKCRTSLELFFAIWFVMGNVWVFD 205

Query: 196 ---------CSCIGYNMNLGSAEKGASDDQISQLHCWKFKLVDTSFDAGN------SSPA 255
                       +GYNMN+GS++KGASDDQISQL  W++K   T  + GN          
Sbjct: 206 SRFGSFCLASRLLGYNMNMGSSDKGASDDQISQLPSWRYKESHTKLELGNKDFEGSEKLI 265

Query: 256 KDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCKQGLDR 276
            ++ ECCICL KYKDKEE+RQLPCSH+FH KCVDQWL IISCCPLCKQGL++
Sbjct: 266 NEDSECCICLAKYKDKEEVRQLPCSHVFHLKCVDQWLKIISCCPLCKQGLEK 316

[Close]

BLAST of Spo21724.1 vs. NCBI nr
Match: gi|502123531|ref|XP_004498153.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Cicer arietinum])

HSP 1 Score: 310.8 bits (795), Expect = 2.300e-81
Identity = 154/318 (48.43%), Postives = 195/318 (61.32%), Query Frame = 1

		  
Query: 14  LISGVPREQDGVVTNDQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDN 73
           ++  +P  Q   ++  Q +P    SF  R+AMR+SR++ F FLRRVFHYQNG RS+LG N
Sbjct: 33  IVQNMPPPQ-ATLSQSQSQP----SFFTRVAMRISRSRCFNFLRRVFHYQNGPRSNLGSN 92

Query: 74  PFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRY 133
           PFN   WMMLE +ALLVQI  T+ TL +SK E+PVWPMR+W+VGYD GCV++LL+LC RY
Sbjct: 93  PFNSNTWMMLELIALLVQITSTTFTLVISKSEKPVWPMRVWIVGYDIGCVLNLLLLCGRY 152

Query: 134 RHYHLGGGDDGVNFPDLEQQRDNEES---RGLHFVNKCKASLDLIFA------------- 193
               +  GDD +   D+EQQ +NEE+   R  H ++KC++SL+L FA             
Sbjct: 153 HQIDVNQGDDALGISDVEQQTNNEENSVYRSTHLMSKCRSSLELFFAIWFVMGNVWSFDS 212

Query: 194 ----------------------------LCSCI-------GYNMNLGSAEKGASDDQISQ 253
                                       LC C+       GYNMN+GS+ KGASDDQISQ
Sbjct: 213 RFGTLQEAPKLQVLCIILLVWNAICYSLLCCCVPLISTLLGYNMNMGSSSKGASDDQISQ 272

Query: 254 LHCWKFKLVDTSFDAGNSSPAKDN-----PECCICLTKYKDKEEIRQLPCSHIFHKKCVD 276
           +  W++K+     D  + S   +      PECCICL KYKDKEE+RQLPCSH+FH  CVD
Sbjct: 273 IPSWRYKVAHNKLDRNDDSQCSERLINEEPECCICLAKYKDKEEVRQLPCSHMFHLNCVD 332

[Close]

BLAST of Spo21724.1 vs. NCBI nr
Match: gi|727538789|ref|XP_010443238.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Camelina sativa])

HSP 1 Score: 290.8 bits (743), Expect = 2.500e-75
Identity = 152/300 (50.67%), Postives = 194/300 (64.67%), Query Frame = 1

		  
Query: 7   VPFSTSRLISGVPREQDGVVT----NDQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHY 66
           +  S+S  ++  PR  +  VT    NDQ R     SF +R+AM+VSRA+WF FLRRVFHY
Sbjct: 19  ITISSSASLNSTPRGDNSHVTTAGNNDQERSPPS-SFYIRLAMKVSRARWFIFLRRVFHY 78

Query: 67  QNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGC 126
           QNG+RS LG NPFN   WMM E VALLVQ+ V ++TL +SK+ERP+WP+R+W+ GYD GC
Sbjct: 79  QNGSRSDLGSNPFNSSAWMMSELVALLVQLTVITLTLAISKDERPIWPVRLWITGYDVGC 138

Query: 127 VVSLLILCWRYRHYHLGGGDDGVNFPDLE-QQRDNEESR--------GLHFVNKCKAS-- 186
           +++L++L  RYR       D G    D+E QQR  E++R         LH +  C  +  
Sbjct: 139 LLNLMLLYGRYRQL-----DVGFVLGDVEQQQRGREDTRFGSFHHAPKLHVLCVCLLAWN 198

Query: 187 --------LDLIFALC------SCIGYNMNLGSAEKGASDDQISQLHCWKFKLV--DTSF 246
                   L  +F  C      S +GYNMN+GS+E+GASDDQIS L  WK+K +  + S 
Sbjct: 199 AVCYSFPFLLFLFLCCLVPLVSSILGYNMNMGSSERGASDDQISSLPSWKYKRIGENASD 258

Query: 247 DAGNSSPAKDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCKQGLDR 276
              +S+   D+PECCICL KYKDKEE+R+LPCSH FH KCVDQWL IISCCPLCKQ L R
Sbjct: 259 SDSDSATTTDDPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLSR 312

[Close]

BLAST of Spo21724.1 vs. NCBI nr
Match: gi|731330166|ref|XP_010675979.1| (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 282.3 bits (721), Expect = 8.800e-73
Identity = 138/190 (72.63%), Postives = 152/190 (80.00%), Query Frame = 1

		  
Query: 1   MGIPSHVPFSTSRLISGVPREQDGV-----VTNDQIRPIREIS--FVVRMAMRVSRAKWF 60
           MG   HVP S+S       RE+DG      VT+DQIRP+RE S   VVRMAMRVSRAKWF
Sbjct: 1   MGFSKHVPCSSSSFSRVEEREEDGEIAHGGVTHDQIRPVREFSTSMVVRMAMRVSRAKWF 60

Query: 61  TFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRI 120
            FLRRVFHYQNG+RSHLG+NPFN  GWMMLEFV LLVQIC+T ITLFVSK ERPVWPMRI
Sbjct: 61  NFLRRVFHYQNGSRSHLGENPFNSYGWMMLEFVTLLVQICITMITLFVSKAERPVWPMRI 120

Query: 121 WVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNEESRGLHFVNKCKASLD 180
           W+VGYDFGCV+SL IL WRYRHYHLG GDDG+NF  LEQQR+NEESR LH VNKC+ASLD
Sbjct: 121 WIVGYDFGCVMSLFILFWRYRHYHLGQGDDGLNFSYLEQQRNNEESRVLHLVNKCRASLD 180

Query: 181 LIFALCSCIG 184
           L FA+   +G
Sbjct: 181 LFFAMWFVMG 190

[Close]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Match: A0A0L9VB85_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g092700 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.600e-89
Identity = 151/246 (61.38%), Postives = 191/246 (77.64%), Query Frame = 1

		  
Query: 38  SFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSI 97
           SF+ R+AMRVSR++WFTFLRRVFHYQNG RS LG NPFN   WMMLE +ALLVQI  T++
Sbjct: 24  SFMTRVAMRVSRSRWFTFLRRVFHYQNGPRSDLGSNPFNSSTWMMLELIALLVQITSTTL 83

Query: 98  TLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNE 157
           TL +SK E+P+WPMR+W+ GYD GC+++LL+LC RY   H+  G   +   DLEQQR++E
Sbjct: 84  TLAISKSEKPIWPMRVWIAGYDIGCLLNLLLLCGRYYQLHVTQG-GSLTLSDLEQQRNSE 143

Query: 158 ES---RGLHFVNKCKASLDLIFALCSCIGYNMNLGSAEKGASDDQISQLHCWKFKLVDTS 217
           ES   RG H ++KC++SL+L FA+C+ +GYNM++GS+ +GASDDQISQ+  W++K   T+
Sbjct: 144 ESSVLRGSHLMDKCRSSLELFFAICTLLGYNMSMGSSARGASDDQISQIPSWRYKGAHTN 203

Query: 218 FDAGNSSPA-----KDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLC 276
            D  N S        D+PECCICL KYKD+EE+RQLPCSH+FH KCVDQWL IISCCPLC
Sbjct: 204 LDFANDSQTTQRLINDDPECCICLAKYKDREEVRQLPCSHLFHLKCVDQWLRIISCCPLC 263

[Close]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CH23_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g090760 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.100e-73
Identity = 138/190 (72.63%), Postives = 152/190 (80.00%), Query Frame = 1

		  
Query: 1   MGIPSHVPFSTSRLISGVPREQDGV-----VTNDQIRPIREIS--FVVRMAMRVSRAKWF 60
           MG   HVP S+S       RE+DG      VT+DQIRP+RE S   VVRMAMRVSRAKWF
Sbjct: 1   MGFSKHVPCSSSSFSRVEEREEDGEIAHGGVTHDQIRPVREFSTSMVVRMAMRVSRAKWF 60

Query: 61  TFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRI 120
            FLRRVFHYQNG+RSHLG+NPFN  GWMMLEFV LLVQIC+T ITLFVSK ERPVWPMRI
Sbjct: 61  NFLRRVFHYQNGSRSHLGENPFNSYGWMMLEFVTLLVQICITMITLFVSKAERPVWPMRI 120

Query: 121 WVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNEESRGLHFVNKCKASLD 180
           W+VGYDFGCV+SL IL WRYRHYHLG GDDG+NF  LEQQR+NEESR LH VNKC+ASLD
Sbjct: 121 WIVGYDFGCVMSLFILFWRYRHYHLGQGDDGLNFSYLEQQRNNEESRVLHLVNKCRASLD 180

Query: 181 LIFALCSCIG 184
           L FA+   +G
Sbjct: 181 LFFAMWFVMG 190

[Close]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Match: A0A078HIV8_BRANA (BnaA03g11130D protein OS=Brassica napus GN=BnaA03g11130D PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.600e-65
Identity = 137/296 (46.28%), Postives = 176/296 (59.46%), Query Frame = 1

		  
Query: 34  IREISFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQIC 93
           ++E SF +R AMRVSRA+WF FLRRVFHYQNG+RS LG NPFN   WMM E +ALLVQ+ 
Sbjct: 35  VQERSFYLRFAMRVSRARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLT 94

Query: 94  VTSITLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQ 153
           V ++TL +SKEERPVWP+R+W+ GYD GC++SL++L  R+R  + G       F D+EQQ
Sbjct: 95  VITLTLAISKEERPVWPVRLWITGYDVGCLLSLMLLYGRFRQLNQGNW-----FVDIEQQ 154

Query: 154 -RDNEESRGLHFVNKCKASLDLIFALCSCIGYNMNLGSAEKGASDDQISQLH-------- 213
            R  +E+R  H +NKC+ SL+L FA+   +G N+ +  A  G S +   +LH        
Sbjct: 155 HRGRDETRSSHLMNKCRTSLELFFAIWFVVG-NVWVFDARFG-SFNHAPKLHVLCVSLLS 214

Query: 214 ----CWKFKLVDTSF-------------------------------------------DA 273
               C+ F  +   F                                           +A
Sbjct: 215 WNALCYSFPFLLFLFLCCLVPLISSLLGYNMNMGSSDRGASDDQISSLPSWKHKRADDNA 274

[Close]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Match: M4ECB1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.200e-61
Identity = 136/322 (42.24%), Postives = 178/322 (55.28%), Query Frame = 1

		  
Query: 10  STSRLISGVPREQDGVVTN--DQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHYQNGTR 69
           S+S L +  PR+ D    +     R     SF++R+AMRVSRA+WF FLRRVFHYQNG+R
Sbjct: 21  SSSSLDTTTPRDDDNTRMSPASNARVNSPTSFLIRLAMRVSRARWFIFLRRVFHYQNGSR 80

Query: 70  SHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVVSLL 129
           S LG NPF    WM+ E +ALLVQI V + TL +SK ERP+WP+R+W+ GY+ GC++SL+
Sbjct: 81  SDLGANPFESTTWMISELIALLVQITVITFTLALSKNERPIWPVRLWITGYNVGCLLSLM 140

Query: 130 ILCWRYRHYHLGGGDDGVNFPDLE--QQRDNEESRGLHFVNKCKASLDLIFALCSCIG-- 189
           IL  RYR   +  G +G  F D+E  QQR  EE+R  H +N+C+  L+L FA+   IG  
Sbjct: 141 ILYGRYRQQDVSQG-NGFTFGDIEQQQQRSREETRCSHLMNRCRTLLELFFAIWFVIGNV 200

Query: 190 --YNMNLGSAEKGASDDQIS------QLHCWKFKLV------------------------ 249
             ++   GS     +   +          C+ F  +                        
Sbjct: 201 WVFDSRFGSFHYAPTLHVLCISLLAWNALCYSFPFLLFLLLCCVVPLISSFLGYNMNIGS 260

Query: 250 ------DTSFDA--------------GNSSPAKDNPECCICLTKYKDKEEIRQLPCSHIF 274
                 D    +               +SS A ++PECCICL KYKDKEE+R+LPCSH F
Sbjct: 261 SEKGASDDQISSLPSWKYKLIDETSDSDSSHASNDPECCICLAKYKDKEEVRKLPCSHRF 320

[Close]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Match: A0A078E0X9_BRANA (BnaC01g18750D protein OS=Brassica napus GN=BnaC01g18750D PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.400e-61
Identity = 135/325 (41.54%), Postives = 178/325 (54.77%), Query Frame = 1

		  
Query: 7   VPFSTSRLISGVPREQDG--VVTNDQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHYQN 66
           +  S+S  +   PR+ D   +V+           F++R+AMRVSRA+WF FLRRVFHYQN
Sbjct: 17  ITVSSSSSLDTTPRDDDNTRMVSASNAGVNSPTPFLIRLAMRVSRARWFIFLRRVFHYQN 76

Query: 67  GTRSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVV 126
           G+RS LG NPF    WM+ E +ALLVQI V + TL +SK ERP+WP+R+W+ GY+ GC++
Sbjct: 77  GSRSDLGANPFESTTWMISELIALLVQITVITFTLALSKNERPIWPVRLWITGYNVGCLL 136

Query: 127 SLLILCWRYRHYHLGGGDDGVNFPDLE--QQRDNEESRGLHFVNKCKASLDLIFALCSCI 186
           SL+IL  RYR   +  G +G  F D+E  QQR  EE+R  H +N+C+  L+L FA+   I
Sbjct: 137 SLMILYGRYRQQDVSQG-NGFTFGDIEQQQQRSREETRCSHLMNRCRTLLELFFAIWFVI 196

Query: 187 G----YNMNLGSAEKGASDDQIS------QLHCWKFKLV--------------------- 246
           G    ++   GS     S   +          C+ F  +                     
Sbjct: 197 GNVWVFDSRFGSFHYAPSLHVLCISLLAWNALCYSFPFLLFLLLCCVVPLISSFLGYNMN 256

Query: 247 ---------DTSFDA--------------GNSSPAKDNPECCICLTKYKDKEEIRQLPCS 274
                    D    +               +SS A ++PECCICL KYKDKEE+R+LPCS
Sbjct: 257 IGSSEKGASDDQISSLPSWKYKLIDETSDSDSSHASNDPECCICLAKYKDKEEVRKLPCS 316

[Close]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.900e-14
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 1

		  
Query: 164 FVNKCKASLDLI-FALCSCIGYNMNLGSA---EKGASDDQISQLHCWKFKLVDTSF---- 223
           FV  C A   +I  A+C C+   + +  A   ++GAS + I QL  +KF+ V  +     
Sbjct: 233 FVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTV 292

Query: 224 --------------DAGNSSPAK-----DNPECCICLTKYKDKEEIRQLPCSHIFHKKCV 274
                         + G  SP +     ++ ECCICL+ Y+D+ E+R+LPC H FH  CV
Sbjct: 293 DEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCV 352

[Close]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.200e-14
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1

		  
Query: 164 FVNKCKASLDLI-FALCSCIGYNMNLGSA---EKGASDDQISQLHCWKF-KLVDTS---- 223
           FV  C A   +I  A+C C+   + +  A   ++GAS + I QL  +KF KL D +    
Sbjct: 263 FVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTN 322

Query: 224 -----------FDAGNSSPAK-----DNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQ 274
                       + G  SP +     ++ ECCICL+ Y+D  E+R+LPC H FH  CVD+
Sbjct: 323 DEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDK 382

[Close]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.500e-13
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 1

		  
Query: 164 FVNKCKASLDLI-FALCSCIGYNMNLGSA---EKGASDDQISQLHCWKF----------- 223
           FV  C A   +I  A+C C+   + +  A   ++GAS + I Q+  ++F           
Sbjct: 253 FVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSG 312

Query: 224 KLVDTSFDAGNSSPAK-----DNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTII 271
           K      + G  SP +     ++ ECCICL +Y+D  E+R+LPC+H FH  C+D+WL I 
Sbjct: 313 KARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHIN 372

[Close]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Match: R111A_XENLA (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis GN=rnf111-a PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.600e-12
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1

		  
Query: 188 LGSAEKGASDDQISQL-HCWKFKLVDTSFDA---------GNSSPAKDNPE-CCICLTKY 247
           LG+  +GAS   I +  +  K+K V T + +         G  +P +D  E C ICL+  
Sbjct: 819 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 878

Query: 248 KDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCKQGLD 275
           ++ E++R+LPC H+FH+ CVDQWL     CP+C+  +D
Sbjct: 879 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 916

[Close]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Match: R111C_XENLA (E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.600e-12
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1

		  
Query: 188 LGSAEKGASDDQISQL-HCWKFKLVDTSFDA---------GNSSPAKDNPE-CCICLTKY 247
           LG+  +GAS   I +  +  K+K V T + +         G  +P +D  E C ICL+  
Sbjct: 863 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 922

Query: 248 KDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCKQGLD 275
           ++ E++R+LPC H+FH+ CVDQWL     CP+C+  +D
Sbjct: 923 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 960

[Close]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Match: AT5G55970.1 (RING/U-box superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 5.200e-47
Identity = 88/177 (49.72%), Postives = 119/177 (67.23%), Query Frame = 1

		  
Query: 7   VPFSTSRLISGVPREQDGVVTNDQIRPIREISFVVRMAMRVSRAKWFTFLRRVFHYQNGT 66
           +  S+S L+S  PR  +  V     +     SF +R+AM+VSRA+WF FLRRVFHYQNG+
Sbjct: 18  ITISSSALLSSSPRGDNSHVAAANGQERSPSSFYIRLAMKVSRARWFIFLRRVFHYQNGS 77

Query: 67  RSHLGDNPFNLCGWMMLEFVALLVQICVTSITLFVSKEERPVWPMRIWVVGYDFGCVVSL 126
           RS LG NPFN   WMM E +ALLVQ+ V + TL +SKEERP+WP+R+W+ GYD GC+++L
Sbjct: 78  RSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNL 137

Query: 127 LILCWRYRHYHLGGGDDGVNFPDLEQQRDNEESRGLHFVNKCKASLDLIFALCSCIG 184
           ++L  RYR   +  G+  V     +QQR  EE+R  H +NKC+ SL+L FA+   IG
Sbjct: 138 MLLYGRYRQLDINQGNGFVLGDVEQQQRGREETRSSHLMNKCRTSLELFFAIWFVIG 194

[Close]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Match: AT4G26580.1 (RING/U-box superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 4.200e-41
Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = 1

		  
Query: 38  SFVVRMAMRVSRAKWFTFLRRVFHYQNGTRSHLGDNPFNLCGWMMLEFVALLVQICVTSI 97
           SF +R+AMRVSRA+WF FLRRVFHYQN +RS LG NPFN   WM+ E +ALL+QI V + 
Sbjct: 45  SFFMRLAMRVSRARWFIFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITS 104

Query: 98  TLFVSKEERPVWPMRIWVVGYDFGCVVSLLILCWRYRHYHLGGGDDGVNFPDLEQQRDNE 157
           TL +SK ERPVWPMR+W+ GY+ GC+++L++L  RYR       ++  +F D+EQQ+ + 
Sbjct: 105 TLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRYRQQDT-SHENAFSFGDIEQQQRSR 164

Query: 158 E--SRGLHFVNKCKASLDLIFALCSCIG 184
           E  +R  H +NKC+ SL+L FA+   IG
Sbjct: 165 EETTRCSHLMNKCRTSLELFFAIWFVIG 191

[Close]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Match: AT4G32600.1 (RING/U-box superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 9.500e-17
Identity = 44/111 (39.64%), Postives = 62/111 (55.86%), Query Frame = 1

		  
Query: 178 LCSCIGYNMNLGSAEKGASDDQISQLHCWKFKLV----------DTSFDAGNSSPAKDNP 237
           + S +GY  +L +  +GA+ + I+ L   KFKL            ++ + G  +   DN 
Sbjct: 295 IISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNE 354

Query: 238 E--------CCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCK 271
                    CCICL KY + EE+R+LPCSH FHK+CVD+WL I + CPLCK
Sbjct: 355 RAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404

[Close]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Match: AT1G63170.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.100e-15
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 1

		  
Query: 164 FVNKCKASLDLI-FALCSCIGYNMNLGSA---EKGASDDQISQLHCWKFKLVDTSF---- 223
           FV  C A   +I  A+C C+   + +  A   ++GAS + I QL  +KF+ V  +     
Sbjct: 233 FVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTV 292

Query: 224 --------------DAGNSSPAK-----DNPECCICLTKYKDKEEIRQLPCSHIFHKKCV 274
                         + G  SP +     ++ ECCICL+ Y+D+ E+R+LPC H FH  CV
Sbjct: 293 DEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCV 352

[Close]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Match: AT1G80400.1 (RING/U-box superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 1

		  
Query: 178 LCSCIGYNMNLGSAEKGASDDQISQLHCWKFKLV---DTSFDAGNSSP------------ 237
           L S +G+  N  S  +GA+ + I+ L  ++FK     D  F                   
Sbjct: 290 LISVLGFRENF-SQTRGATAEAINALPVYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLI 349

Query: 238 AKDNPECCICLTKYKDKEEIRQLPCSHIFHKKCVDQWLTIISCCPLCK 271
           + ++  CCICLT+Y D E++R+LPCSH+FH  CVD+WL I + CPLCK
Sbjct: 350 SGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

The following BLAST results are available for this feature:

BLAST of Spo21724.1 vs. NCBI nr
BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
BLAST of Spo21724.1 vs. TAIR (Arabidopsis)

BLAST of Spo21724.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|920711019\|gb\|KOM52268.1\|	5.1e-89	61.3	hypothetical protein LR48_Viga...	[more]
gi\|1021551701\|ref\|XP_016167207.1\|	9.4e-83	53.7	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|502123531\|ref\|XP_004498153.1\|	2.3e-81	48.4	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|727538789\|ref\|XP_010443238.1\|	2.5e-75	50.6	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|731330166\|ref\|XP_010675979.1\|	8.8e-73	72.6	PREDICTED: E3 ubiquitin-protei...	[more]

BLAST of Spo21724.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0L9VB85_PHAAN	3.6e-89	61.3	Uncharacterized protein OS=Pha...	[more]
A0A0J8CH23_BETVU	6.1e-73	72.6	Uncharacterized protein OS=Bet...	[more]
A0A078HIV8_BRANA	1.6e-65	46.2	BnaA03g11130D protein OS=Brass...	[more]
M4ECB1_BRARP	3.2e-61	42.2	Uncharacterized protein OS=Bra...	[more]
A0A078E0X9_BRANA	5.4e-61	41.5	BnaC01g18750D protein OS=Brass...	[more]

BLAST of Spo21724.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RING2_ARATH	1.9e-14	35.0	E3 ubiquitin-protein ligase At...	[more]
RING1_ARATH	4.2e-14	37.0	E3 ubiquitin-protein ligase At...	[more]
RING4_ARATH	3.5e-13	36.2	E3 ubiquitin-protein ligase At...	[more]
R111A_XENLA	6.6e-12	36.7	E3 ubiquitin-protein ligase ar...	[more]
R111C_XENLA	6.6e-12	36.7	E3 ubiquitin-protein ligase ar...	[more]

BLAST of Spo21724.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G55970.1	5.2e-47	49.7	RING/U-box superfamily protein	[more]
AT4G26580.1	4.2e-41	53.3	RING/U-box superfamily protein	[more]
AT4G32600.1	9.5e-17	39.6	RING/U-box superfamily protein	[more]
AT1G63170.1	1.1e-15	35.0	Zinc finger, C3HC4 type (RING ...	[more]
AT1G80400.1	1.8e-15	37.9	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 227..270 score: 5.0
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 229..269 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 229..270 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 224..272 score: 3.7
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 10..275 score: 5.3E
None	No IPR available	PANTHER	PTHR14155:SF83	RING/U-BOX DOMAIN-CONTAINING PROTEIN	coord: 10..275 score: 5.3E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 228..273 score: 1.74

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016787	hydrolase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16335	0.69	Barchart \| Table
Spo23582	0.68	Barchart \| Table