Spo21766 (gene) | SpinachBase

Overview


Name	Spo21766
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	rRNA N-glycosidase (3.2.2.22)
Location	chr2 : 56897646 .. 56898602 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTGTTTACAGCAGCAAAATGGATTTGGTGGTGCACCGTGATAATAACGGTGGTGGTTATGCTTTCATTGACCCTAATAAAAAAGGAACAAGTTGGCAGGCAACTAGGCCAGCAAGTAGGGGCTTTCACCACCGTGACATTCGAACTTGATGATGGTCTTTCGGGCTATTCAGAATTCTTAACAAGGTTGCGCGACGCATTGGAAGCCCCCACAAAGGCATGCGGCTTGCAAACGACGGTAGGTAGCCCATCAAAGGGTGAAGAATATATTCATGTGGATATCAAATTTAGTAACACACAATGGGTGACCATAGGAATAGATGTAATGGATATGTATGTGTGGGGTTATAAAGATAATGTTAAATATAAGGGTAAATCTCGAGCCACTTTCTTCAAAAACACTCCTAAAGTTGCCAAGGATAACCTTTTCCCAGATACGACACCAAGAACTACTACATTTCTTAGCACCTATGGAAGCCTAGAGAGGTACGCCAAAGTAGGCAGAGTGGACCTTGAACTAACCCTTAAAAACCTTAAAGCTTGCATCATAAGTGTTTACGGGAAACCAGAAAAAGAACTGGATAACGCGGTTGAGGCTAAATTTGTACTTATCGCCGTCCAAATGGTTGCAGAGGCAACACGTTTTAGATTCATGGAAAAGGGAATAGTTAACTTCGATAGCTCAAAAGCGTTCAAATACAAAATGGTAGCTTTTCAGAACGACTGGGATCCAGCCTCCCAAGCTATTCATAAAGCATCACCTACGTGCACGACTATTTCTCCGACCCTTGTAATTAGTACCATCGACTATAGGCAGGAGGTGAAAGAAGTGGATGAAATAAAAGACGACATGGGTCTCCTAAAGTTCAAAAGGAGCAACACTATACAGTCAATTTCGAATGACGATGGTGTTGTTGATAATGATCAGAATCTACACTTCAGTGAATTGTGA

mRNA sequence

ATGAAGGTGTTTACAGCAGCAAAATGGATTTGGTGGTGCACCGTGATAATAACGGTGGTGGTTATGCTTTCATTGACCCTAATAAAAAAGGAACAAGTTGGCAGGCAACTAGGCCAGCAAGTAGGGGCTTTCACCACCGTGACATTCGAACTTGATGATGGTCTTTCGGGCTATTCAGAATTCTTAACAAGGTTGCGCGACGCATTGGAAGCCCCCACAAAGGCATGCGGCTTGCAAACGACGGTAGGTAGCCCATCAAAGGGTGAAGAATATATTCATGTGGATATCAAATTTAGTAACACACAATGGGTGACCATAGGAATAGATGTAATGGATATGTATGTGTGGGGTTATAAAGATAATGTTAAATATAAGGGTAAATCTCGAGCCACTTTCTTCAAAAACACTCCTAAAGTTGCCAAGGATAACCTTTTCCCAGATACGACACCAAGAACTACTACATTTCTTAGCACCTATGGAAGCCTAGAGAGGTACGCCAAAGTAGGCAGAGTGGACCTTGAACTAACCCTTAAAAACCTTAAAGCTTGCATCATAAGTGTTTACGGGAAACCAGAAAAAGAACTGGATAACGCGGTTGAGGCTAAATTTGTACTTATCGCCGTCCAAATGGTTGCAGAGGCAACACGTTTTAGATTCATGGAAAAGGGAATAGTTAACTTCGATAGCTCAAAAGCGTTCAAATACAAAATGGTAGCTTTTCAGAACGACTGGGATCCAGCCTCCCAAGCTATTCATAAAGCATCACCTACGTGCACGACTATTTCTCCGACCCTTGTAATTAGTACCATCGACTATAGGCAGGAGGTGAAAGAAGTGGATGAAATAAAAGACGACATGGGTCTCCTAAAGTTCAAAAGGAGCAACACTATACAGTCAATTTCGAATGACGATGGTGTTGTTGATAATGATCAGAATCTACACTTCAGTGAATTGTGA

Coding sequence (CDS)

ATGAAGGTGTTTACAGCAGCAAAATGGATTTGGTGGTGCACCGTGATAATAACGGTGGTGGTTATGCTTTCATTGACCCTAATAAAAAAGGAACAAGTTGGCAGGCAACTAGGCCAGCAAGTAGGGGCTTTCACCACCGTGACATTCGAACTTGATGATGGTCTTTCGGGCTATTCAGAATTCTTAACAAGGTTGCGCGACGCATTGGAAGCCCCCACAAAGGCATGCGGCTTGCAAACGACGGTAGGTAGCCCATCAAAGGGTGAAGAATATATTCATGTGGATATCAAATTTAGTAACACACAATGGGTGACCATAGGAATAGATGTAATGGATATGTATGTGTGGGGTTATAAAGATAATGTTAAATATAAGGGTAAATCTCGAGCCACTTTCTTCAAAAACACTCCTAAAGTTGCCAAGGATAACCTTTTCCCAGATACGACACCAAGAACTACTACATTTCTTAGCACCTATGGAAGCCTAGAGAGGTACGCCAAAGTAGGCAGAGTGGACCTTGAACTAACCCTTAAAAACCTTAAAGCTTGCATCATAAGTGTTTACGGGAAACCAGAAAAAGAACTGGATAACGCGGTTGAGGCTAAATTTGTACTTATCGCCGTCCAAATGGTTGCAGAGGCAACACGTTTTAGATTCATGGAAAAGGGAATAGTTAACTTCGATAGCTCAAAAGCGTTCAAATACAAAATGGTAGCTTTTCAGAACGACTGGGATCCAGCCTCCCAAGCTATTCATAAAGCATCACCTACGTGCACGACTATTTCTCCGACCCTTGTAATTAGTACCATCGACTATAGGCAGGAGGTGAAAGAAGTGGATGAAATAAAAGACGACATGGGTCTCCTAAAGTTCAAAAGGAGCAACACTATACAGTCAATTTCGAATGACGATGGTGTTGTTGATAATGATCAGAATCTACACTTCAGTGAATTGTGA

Protein sequence

MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNLKACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAFQNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSISNDDGVVDNDQNLHFSEL

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21766.1	Spo21766.1	mRNA

Homology

[Close]

BLAST of Spo21766.1 vs. NCBI nr
Match: gi|902201889|gb|KNA14121.1| (hypothetical protein SOVF_110510 [Spinacia oleracea])

HSP 1 Score: 632.5 bits (1630), Expect = 4.000e-178
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE 60
           MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE
Sbjct: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE 60

Query: 61  FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD 120
           FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD
Sbjct: 61  FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD 120

Query: 121 NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL 180
           NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL
Sbjct: 121 NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL 180

Query: 181 KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF 240
           KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF
Sbjct: 181 KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF 240

Query: 241 QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI 300
           QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI
Sbjct: 241 QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI 300

Query: 301 SNDDGVVDNDQNLHFSEL 319
           SNDDGVVDNDQNLHFSEL
Sbjct: 301 SNDDGVVDNDQNLHFSEL 318

[Close]

BLAST of Spo21766.1 vs. NCBI nr
Match: gi|902201888|gb|KNA14120.1| (hypothetical protein SOVF_110500 [Spinacia oleracea])

HSP 1 Score: 403.3 bits (1035), Expect = 4.000e-109
Identity = 211/279 (75.63%), Postives = 235/279 (84.23%), Query Frame = 1


		  
Query: 19  VVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSEFLTRLRDALEAPTKACGL 78
           VVVML LT  +KEQVG++LG    AFTTVTFEL  GLSGYS+FLTRLR+ +EAP+  CGL
Sbjct: 2   VVVMLPLTHQQKEQVGKKLG----AFTTVTFELSSGLSGYSQFLTRLRNVVEAPSMTCGL 61

Query: 79  QTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTPK 138
            +T+ +P +G+EY+HVDIK SNTQ V IGIDVMD+YVWGYKD   + GK RATFF NTPK
Sbjct: 62  PSTLRTPLRGKEYVHVDIKLSNTQKVNIGIDVMDLYVWGYKDI--FNGKPRATFFGNTPK 121

Query: 139 VAKDNLFPDTT-PRTTTFLSTYGSLERYAKVGRVDLELTLKNLKACIISVYGKPEKELDN 198
            AKD LFPDTT  RTT FLSTY SLERYAKVGR DLEL LK L+  I SVYGKPEKEL N
Sbjct: 122 DAKDKLFPDTTVSRTTKFLSTYVSLERYAKVGRKDLELKLKTLEDGIKSVYGKPEKELGN 181

Query: 199 AVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAFQNDWDPASQAIHKASPT 258
           A EAKFVLIA+QMVAEA RF+FME GIVNFDSSKAFK KM+AFQNDWDPASQAIHKASP 
Sbjct: 182 AAEAKFVLIAIQMVAEAARFKFMENGIVNFDSSKAFKNKMIAFQNDWDPASQAIHKASPK 241

Query: 259 CTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNT 297
           CTTISPTL+IS IDYRQEVK VD+IK+DMGLLK+K+SNT
Sbjct: 242 CTTISPTLIISNIDYRQEVKTVDQIKNDMGLLKYKKSNT 274

[Close]

BLAST of Spo21766.1 vs. NCBI nr
Match: gi|99646716|emb|CAK22417.1| (ribosome-inactivating protein [Beta vulgaris])

HSP 1 Score: 328.2 bits (840), Expect = 1.600e-86
Identity = 179/314 (57.01%), Postives = 220/314 (70.06%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDG---LSG 60
           MK  TAA+WI WC +++ V+V ++ T  + E VG++L     ++TTVTFEL  G   L G
Sbjct: 1   MKALTAARWIQWCIIMVVVIVPITATTTEDEAVGKKL-----SYTTVTFELKYGVEPLKG 60

Query: 61  YSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWG 120
           YS FLTRLR+A+EAPT+ACGLQ T   P  G++Y+ VD+KFSNTQWVT+GID  D+YVW 
Sbjct: 61  YSSFLTRLRNAVEAPTRACGLQFTRKVPLTGKQYVLVDLKFSNTQWVTLGIDAKDLYVWA 120

Query: 121 YKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTL 180
           Y+DNVKY GK RA F  + P+ AK++LFP +T RTT F   Y SLE  A V R ++ L  
Sbjct: 121 YQDNVKYNGKFRANFLGDAPQSAKNSLFPGSTKRTTRFGGNYNSLEPAAGVTRNNIVLGT 180

Query: 181 KNLKACIISVYGKPEKELDNAV-EAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYK 240
           +NL   I  VYGK E  L+    EAKF LIA+QMVAEA RF+FME+GIV  D + AFK K
Sbjct: 181 QNLDGAIKRVYGKQEGVLNQGKDEAKFFLIAIQMVAEAARFKFMEQGIVKGDKTTAFKAK 240

Query: 241 MVAFQNDWDPASQAIHKASPT---CTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKR 300
           MVAFQNDWDP SQAIH+A      CTTISPTLVIS   YRQEV  VD +K+DMGLLK+K 
Sbjct: 241 MVAFQNDWDPISQAIHRAEAAARKCTTISPTLVISNTGYRQEVNRVDAVKNDMGLLKYKS 300

Query: 301 --SNTIQSISNDDG 306
             S+ + SI  DDG
Sbjct: 301 IGSSVVNSILADDG 309

[Close]

BLAST of Spo21766.1 vs. NCBI nr
Match: gi|731354502|ref|XP_010688631.1| (PREDICTED: ribosome-inactivating protein PD-L3/PD-L4-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 327.0 bits (837), Expect = 3.600e-86
Identity = 179/314 (57.01%), Postives = 220/314 (70.06%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDG---LSG 60
           MK  TAA+WI WC +++ V+V ++ T  + E VG++L     ++TTVTFEL  G   L G
Sbjct: 1   MKALTAARWIQWCIIMVVVIVPITATTTEDEAVGKKL-----SYTTVTFELKYGVEPLKG 60

Query: 61  YSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWG 120
           YS FLTRLR+A+EAPT+ACGLQ T   P  G++Y+ VD+KFSNTQWVT+GID  D+YVW 
Sbjct: 61  YSSFLTRLRNAVEAPTRACGLQFTRKVPLTGKQYVLVDLKFSNTQWVTLGIDAKDLYVWA 120

Query: 121 YKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTL 180
           Y+DNV Y GK RA F  + P+ AK++LFP +T RTT F   Y SLE  A V R ++ L  
Sbjct: 121 YQDNVIYNGKFRANFLGDAPQSAKNSLFPGSTKRTTRFGGNYNSLEPAAGVTRNNIVLGT 180

Query: 181 KNLKACIISVYGKPEKELDNAV-EAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYK 240
           +NL   I  VYGK E  L+    EAKF LIA+QMVAEA RF+FME+GIV  D + AFK K
Sbjct: 181 QNLDGAIKRVYGKQEGVLNQGKDEAKFFLIAIQMVAEAARFKFMEQGIVKGDKTTAFKAK 240

Query: 241 MVAFQNDWDPASQAIHKASPT---CTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKR 300
           MVAFQNDWDP SQAIH+A      CTTISPTLVIS I YRQEV  VD +K+DMGLLK+K 
Sbjct: 241 MVAFQNDWDPISQAIHRAEAAARKCTTISPTLVISNIGYRQEVNRVDAVKNDMGLLKYKS 300

Query: 301 --SNTIQSISNDDG 306
             S+ + SI  DDG
Sbjct: 301 IGSSVVNSILADDG 309

[Close]

BLAST of Spo21766.1 vs. NCBI nr
Match: gi|18149181|dbj|BAB83507.1| (ribosome-inactivating protein [Spinacia oleracea])

HSP 1 Score: 317.4 bits (812), Expect = 2.900e-83
Identity = 173/322 (53.73%), Postives = 227/322 (70.50%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIW-WCTVIITVVVML----SLTLIKKEQVGRQLGQQVGAFTTVTFELDDGL 60
           MK+     W+  WC +++ VV +     SL +++ E++   L      +TTVTFEL +G+
Sbjct: 1   MKLSATTIWVLRWCMMMVVVVAVAVVPPSLAVVEDEEMIENL-----RYTTVTFELTNGV 60

Query: 61  SGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYV 120
           +GYS F+TRLR+A+EAPT+ACGLQ+T  +P  G EYIHVD+K SNTQWVT+GIDV D YV
Sbjct: 61  TGYSSFMTRLRNAVEAPTRACGLQSTRSTPLPGAEYIHVDLKISNTQWVTLGIDVKDFYV 120

Query: 121 WGYKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLEL 180
           WGY+DNV+Y G  RA+F  + P+ AK+NLF  +T RTT F   Y SLE  A + R +L L
Sbjct: 121 WGYQDNVRYNGNYRASFLNDAPQAAKNNLFRGSTIRTTRFGGNYNSLEPAAGITRRNLVL 180

Query: 181 TLKNLKACIISVYGKPEKELDNA-VEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFK 240
            ++NL   I +VYGK E EL+    EA+F LIA+QMVAEA RF+FME+ IV  D++  FK
Sbjct: 181 GIQNLDGAIRTVYGKQESELNKGNAEARFFLIAIQMVAEAARFKFMEEAIVRNDNTPDFK 240

Query: 241 YKMVAFQNDWDPASQAIHK---ASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKF 300
            KMVAFQNDWDP S AIH+   A+P CT I+PTLVIS  +YRQEV  V EIKDDMGLLK+
Sbjct: 241 RKMVAFQNDWDPISTAIHRAEAATPKCTRITPTLVISNTEYRQEVNTVAEIKDDMGLLKY 300

Query: 301 KRSNTIQSISNDDGVVDNDQNL 314
            RS T+ SI++   ++D+D+ L
Sbjct: 301 -RSTTLSSIAS--SILDDDEFL 314

[Close]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3P2_SPIOL (rRNA N-glycosidase OS=Spinacia oleracea GN=SOVF_110510 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 2.800e-178
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE 60
           MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE
Sbjct: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSE 60

Query: 61  FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD 120
           FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD
Sbjct: 61  FLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKD 120

Query: 121 NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL 180
           NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL
Sbjct: 121 NVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTLKNL 180

Query: 181 KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF 240
           KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF
Sbjct: 181 KACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAF 240

Query: 241 QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI 300
           QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI
Sbjct: 241 QNDWDPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNTIQSI 300

Query: 301 SNDDGVVDNDQNLHFSEL 319
           SNDDGVVDNDQNLHFSEL
Sbjct: 301 SNDDGVVDNDQNLHFSEL 318

[Close]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3P9_SPIOL (rRNA N-glycosidase OS=Spinacia oleracea GN=SOVF_110500 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.800e-109
Identity = 211/279 (75.63%), Postives = 235/279 (84.23%), Query Frame = 1


		  
Query: 19  VVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDGLSGYSEFLTRLRDALEAPTKACGL 78
           VVVML LT  +KEQVG++LG    AFTTVTFEL  GLSGYS+FLTRLR+ +EAP+  CGL
Sbjct: 2   VVVMLPLTHQQKEQVGKKLG----AFTTVTFELSSGLSGYSQFLTRLRNVVEAPSMTCGL 61

Query: 79  QTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTPK 138
            +T+ +P +G+EY+HVDIK SNTQ V IGIDVMD+YVWGYKD   + GK RATFF NTPK
Sbjct: 62  PSTLRTPLRGKEYVHVDIKLSNTQKVNIGIDVMDLYVWGYKDI--FNGKPRATFFGNTPK 121

Query: 139 VAKDNLFPDTT-PRTTTFLSTYGSLERYAKVGRVDLELTLKNLKACIISVYGKPEKELDN 198
            AKD LFPDTT  RTT FLSTY SLERYAKVGR DLEL LK L+  I SVYGKPEKEL N
Sbjct: 122 DAKDKLFPDTTVSRTTKFLSTYVSLERYAKVGRKDLELKLKTLEDGIKSVYGKPEKELGN 181

Query: 199 AVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKMVAFQNDWDPASQAIHKASPT 258
           A EAKFVLIA+QMVAEA RF+FME GIVNFDSSKAFK KM+AFQNDWDPASQAIHKASP 
Sbjct: 182 AAEAKFVLIAIQMVAEAARFKFMENGIVNFDSSKAFKNKMIAFQNDWDPASQAIHKASPK 241

Query: 259 CTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKRSNT 297
           CTTISPTL+IS IDYRQEVK VD+IK+DMGLLK+K+SNT
Sbjct: 242 CTTISPTLIISNIDYRQEVKTVDQIKNDMGLLKYKKSNT 274

[Close]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Match: Q1H8N0_BETVU (rRNA N-glycosidase OS=Beta vulgaris GN=rip-r1 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.100e-86
Identity = 179/314 (57.01%), Postives = 220/314 (70.06%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDG---LSG 60
           MK  TAA+WI WC +++ V+V ++ T  + E VG++L     ++TTVTFEL  G   L G
Sbjct: 1   MKALTAARWIQWCIIMVVVIVPITATTTEDEAVGKKL-----SYTTVTFELKYGVEPLKG 60

Query: 61  YSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWG 120
           YS FLTRLR+A+EAPT+ACGLQ T   P  G++Y+ VD+KFSNTQWVT+GID  D+YVW 
Sbjct: 61  YSSFLTRLRNAVEAPTRACGLQFTRKVPLTGKQYVLVDLKFSNTQWVTLGIDAKDLYVWA 120

Query: 121 YKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLELTL 180
           Y+DNVKY GK RA F  + P+ AK++LFP +T RTT F   Y SLE  A V R ++ L  
Sbjct: 121 YQDNVKYNGKFRANFLGDAPQSAKNSLFPGSTKRTTRFGGNYNSLEPAAGVTRNNIVLGT 180

Query: 181 KNLKACIISVYGKPEKELDNAV-EAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYK 240
           +NL   I  VYGK E  L+    EAKF LIA+QMVAEA RF+FME+GIV  D + AFK K
Sbjct: 181 QNLDGAIKRVYGKQEGVLNQGKDEAKFFLIAIQMVAEAARFKFMEQGIVKGDKTTAFKAK 240

Query: 241 MVAFQNDWDPASQAIHKASPT---CTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKFKR 300
           MVAFQNDWDP SQAIH+A      CTTISPTLVIS   YRQEV  VD +K+DMGLLK+K 
Sbjct: 241 MVAFQNDWDPISQAIHRAEAAARKCTTISPTLVISNTGYRQEVNRVDAVKNDMGLLKYKS 300

Query: 301 --SNTIQSISNDDG 306
             S+ + SI  DDG
Sbjct: 301 IGSSVVNSILADDG 309

[Close]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Match: Q8VWY2_SPIOL (rRNA N-glycosidase OS=Spinacia oleracea GN=BP31/SoRIP1 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.000e-83
Identity = 173/322 (53.73%), Postives = 227/322 (70.50%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIW-WCTVIITVVVML----SLTLIKKEQVGRQLGQQVGAFTTVTFELDDGL 60
           MK+     W+  WC +++ VV +     SL +++ E++   L      +TTVTFEL +G+
Sbjct: 1   MKLSATTIWVLRWCMMMVVVVAVAVVPPSLAVVEDEEMIENL-----RYTTVTFELTNGV 60

Query: 61  SGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYV 120
           +GYS F+TRLR+A+EAPT+ACGLQ+T  +P  G EYIHVD+K SNTQWVT+GIDV D YV
Sbjct: 61  TGYSSFMTRLRNAVEAPTRACGLQSTRSTPLPGAEYIHVDLKISNTQWVTLGIDVKDFYV 120

Query: 121 WGYKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTTTFLSTYGSLERYAKVGRVDLEL 180
           WGY+DNV+Y G  RA+F  + P+ AK+NLF  +T RTT F   Y SLE  A + R +L L
Sbjct: 121 WGYQDNVRYNGNYRASFLNDAPQAAKNNLFRGSTIRTTRFGGNYNSLEPAAGITRRNLVL 180

Query: 181 TLKNLKACIISVYGKPEKELDNA-VEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFK 240
            ++NL   I +VYGK E EL+    EA+F LIA+QMVAEA RF+FME+ IV  D++  FK
Sbjct: 181 GIQNLDGAIRTVYGKQESELNKGNAEARFFLIAIQMVAEAARFKFMEEAIVRNDNTPDFK 240

Query: 241 YKMVAFQNDWDPASQAIHK---ASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKF 300
            KMVAFQNDWDP S AIH+   A+P CT I+PTLVIS  +YRQEV  V EIKDDMGLLK+
Sbjct: 241 RKMVAFQNDWDPISTAIHRAEAATPKCTRITPTLVISNTEYRQEVNTVAEIKDDMGLLKY 300

Query: 301 KRSNTIQSISNDDGVVDNDQNL 314
            RS T+ SI++   ++D+D+ L
Sbjct: 301 -RSTTLSSIAS--SILDDDEFL 314

[Close]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BRN0_BETVU (rRNA N-glycosidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202450 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.100e-68
Identity = 148/296 (50.00%), Postives = 200/296 (67.57%), Query Frame = 1


		  
Query: 1   MKVFTAAKWIWWCTVIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELD--DGLSGY 60
           MKV  AA W+WWC +++ +VVM SL ++  E       QQ+G + TV+++L   D +  Y
Sbjct: 1   MKVSAAAIWMWWC-IMMVMVVMPSLAILYDE-----CDQQLG-YNTVSWDLSLPDPVKCY 60

Query: 61  SEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGY 120
            +FLTRLR+ +EAP + CGL +T  +P +G+EYI VD+K SN  WVTIGIDV+D+YVWGY
Sbjct: 61  PKFLTRLRNQVEAPIRICGLPSTRHAPLEGQEYITVDLKISNRNWVTIGIDVIDLYVWGY 120

Query: 121 KDNVKYKGKSRATFFKNTPKVAKDNLFPDTT-PRTTTFLSTYGSLERYAKVGRVDLELTL 180
           +D  K+ G  R+TF  + P+ A++ LF D    RTT F   Y SLE YA+  R  LEL +
Sbjct: 121 QD--KFNGILRSTFVNDVPQAARNTLFQDAAIRRTTNFAGNYDSLEPYARTDRTRLELGV 180

Query: 181 KNLKACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVNFDSSKAFKYKM 240
             L+  I SVYGKPE EL+NA EAKF LI +QMVAEA+RF+FME  IV  D+S   K KM
Sbjct: 181 DKLQGAIRSVYGKPETELNNAAEAKFFLIVIQMVAEASRFKFMENAIVWKDNSDDTKLKM 240

Query: 241 VAFQNDWDPASQAIHKAS--PTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKF 292
            AFQNDW   S+A + AS    CTTI+P + +  ++Y+Q V  V++IK+D+GLLK+
Sbjct: 241 KAFQNDWAKISKAFYNASTYTRCTTINPPIEVGNVEYKQMVYNVNDIKEDIGLLKY 287

[Close]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Match: RIPP_MIRJA (Antiviral protein MAP OS=Mirabilis jalapa PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.600e-25
Identity = 83/240 (34.58%), Postives = 130/240 (54.17%), Query Frame = 1


		  
Query: 58  YSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWG 117
           Y  F+T +R  +   T+ C +Q    S +  + Y ++D+  S+TQ +T+ ID+ D+YV G
Sbjct: 46  YLSFITNIRTKVADKTEQCTIQKI--SKTFTQRYSYIDLIVSSTQKITLAIDMADLYVLG 105

Query: 118 YKDNVKYKGKSRATFFKNTPKVAKDNLFPDTTPRTT---TFLSTYGSLERYAKVGRVDLE 177
           Y D    KG  RA FFK+  +   +N FP  T       TF  +YG LE+   + R D  
Sbjct: 106 YSDIANNKG--RAFFFKDVTEAVANNFFPGATGTNRIKLTFTGSYGDLEKNGGL-RKDNP 165

Query: 178 LTLKNLKACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGIVN--FDSSKA 237
           L +  L+  I+++YGK     D   +AKF L+A+QMV+EA RF+++   I +  ++    
Sbjct: 166 LGIFRLENSIVNIYGKAG---DVKKQAKFFLLAIQMVSEAARFKYISDKIPSEKYEEVTV 225

Query: 238 FKYKMVAFQNDWDPASQAIHKASPTCTTISP-TLVISTIDYRQEV-KEVDEIKDDMGLLK 291
            +Y M A +N+W   S A++ + P+ TT +   L  S +     + K V+EIK  MGLLK
Sbjct: 226 DEY-MTALENNWAKLSTAVYNSKPSTTTATKCQLATSPVTISPWIFKTVEEIKLVMGLLK 276

[Close]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Match: RIPA_PHYAM (Antiviral protein alpha OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.200e-19
Identity = 78/287 (27.18%), Postives = 144/287 (50.17%), Query Frame = 1


		  
Query: 15  VIITVVVMLSLTLIKKEQVGRQLGQQVGAFTTVTFELDDG-LSGYSEFLTRLRDALEAPT 74
           +++ VV+MLS  ++K             A  T+TF++ +  ++ Y+ F+  + +  + PT
Sbjct: 4   MVVVVVMMLSWLILKPPSTW--------AINTITFDVGNATINKYATFMKSIHNQAKDPT 63

Query: 75  KACGLQTTVGSPSKGEEYIHVDIKFSNTQWVTIGIDVMDMYVWGYKDNVKYKGKSRATFF 134
             C     + + +   +Y+ V ++ S+ + +T+ +   ++YV GY D   Y GK R   F
Sbjct: 64  LKCYGIPMLPNTNLTPKYLLVTLQDSSLKTITLMLKRNNLYVMGYADT--YNGKCRYHIF 123

Query: 135 KNTPKVAKDN-----LFPDTTPRT---TTFLSTYGSLERYAKVGRVDLELTLKNLKACII 194
           K+     + N     L P+ + R      + S+Y +LE+     R  ++L ++ L + I 
Sbjct: 124 KDISNTTERNDVMTTLCPNPSSRVGKNINYDSSYPALEKKVGRPRSQVQLGIQILNSGIG 183

Query: 195 SVYGKPEKELDNAVEAKFVLIAVQMVAEATRFRFMEKGI-VNFDSSKAFKYKMVAFQNDW 254
            +YG          EA+F+L+A+QMV+EA RF+++E  +  NF+ +     K++  +  W
Sbjct: 184 KIYGVDS--FTEKTEAEFLLVAIQMVSEAARFKYIENQVKTNFNRAFYPNAKVLNLEESW 243

Query: 255 DPASQAIHKASPTCTTISPTLVISTIDYRQEVKEVDEIKDDMGLLKF 292
              S AIH A     T SP  + +    +  V  VD+I+ D+GLLK+
Sbjct: 244 GKISTAIHNAKNGALT-SPLELKNANGSKWIVLRVDDIEPDVGLLKY 277

[Close]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Match: RIPL2_PHYDI (Ribosome-inactivating protein PD-L3/PD-L4 OS=Phytolacca dioica PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 2.500e-18
Identity = 73/256 (28.52%), Postives = 133/256 (51.95%), Query Frame = 1


		  
Query: 46  TVTFELDDG-LSGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWV 105
           T+TF++ +  ++ Y+ F+  LR+  + PT  C     +   +   +Y+ V ++ ++++ +
Sbjct: 3   TITFDVGNATINKYATFMESLRNEAKDPTLKCYGIPMLPDSNLTPKYVLVKLQDASSKTI 62

Query: 106 TIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTPKV----AKDNLFPDTTPR---TTTFLS 165
           T+ +   ++YV GY D   Y GK R   F +         ++ L P++  R      + S
Sbjct: 63  TLMLRRNNLYVMGYSD--LYNGKCRYHIFNDISSTESTDVENTLCPNSNSREKKAINYNS 122

Query: 166 TYGSLERYAKVG-RVDLELTLKNLKACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATR 225
            Y +L+  A V  R  ++L ++ L + I  + G       +  EA+F+L+A+QMV+EA R
Sbjct: 123 QYSTLQNKAGVSSRSQVQLGIQILNSDIGKISGV--STFTDKTEAEFLLVAIQMVSEAAR 182

Query: 226 FRFMEKGI-VNFDSSKAFKYKMVAFQNDWDPASQAIHKASPTCTTISPTLVISTIDYRQE 285
           F+++E  +  NF+ +     K+++ + +W   S AIH A     T SP  + +  D +  
Sbjct: 183 FKYIENQVKTNFNRAFNPNPKVLSLEENWGKISLAIHNAKNGALT-SPLELKNADDTKWI 242

Query: 286 VKEVDEIKDDMGLLKF 292
           V  VDEIK DMGLL +
Sbjct: 243 VLRVDEIKPDMGLLNY 253

[Close]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Match: RIP2_PHYDI (Protein synthesis inhibitor PD-S2 OS=Phytolacca dioica PE=1 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 1.400e-16
Identity = 77/262 (29.39%), Postives = 134/262 (51.15%), Query Frame = 1


		  
Query: 45  TTVTFELDDG-LSGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDI--KFSN- 104
           +T+TF++    +S Y+ FL  LR+  + P+  C     + + +   +Y+ V++  K S+ 
Sbjct: 2   STITFDVGSATISKYTTFLESLRNQAKDPSLKCYGIPMLPNTNPNPKYLLVELNAKLSSG 61

Query: 105 -TQWVTIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTP-----KVAKDNLFPDTTPRTT- 164
             + +T+ +   ++YV GY D   Y  K R   FK+       K  +  L P+ + R + 
Sbjct: 62  EVKSITLMLRRHNLYVMGYSD--PYDNKCRYHIFKDISSTTERKDVETTLCPNASSRVSK 121

Query: 165 --TFLSTYGSLERYAKVGRVDLELTLKNLKACIISVYGKPEKELDNAVEAKFVLIAVQMV 224
             ++ S+Y +LE  A   R  ++L ++ L + I  + G   K   +  EA+F+L+A+QMV
Sbjct: 122 NISYDSSYPALENKAGRSRSQVQLGIQILNSDIGKISGV--KSFTDKTEAEFLLVAIQMV 181

Query: 225 AEATRFRFMEKGI-VNFDSSKAFKYKMVAFQNDWDPASQAIHKASPTCTTISPTLVISTI 284
           +EATRF+++E  +  NF+ +     K++  +  W   S AIH A       S  L +   
Sbjct: 182 SEATRFKYIENQVKTNFNRAFYPNAKVLNLEETWGKISMAIHGAKN--GAFSKPLELQNA 241

Query: 285 D-YRQEVKEVDEIKDDMGLLKF 292
           D  +  V  VDEIK D+ LLK+
Sbjct: 242 DGSKWIVLRVDEIKPDVALLKY 257

[Close]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Match: RIPS_PHYAM (Antiviral protein S OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.800e-16
Identity = 69/256 (26.95%), Postives = 129/256 (50.39%), Query Frame = 1


		  
Query: 46  TVTFELDDG-LSGYSEFLTRLRDALEAPTKACGLQTTVGSPSKGEEYIHVDIKFSNTQWV 105
           T+TF+  +  ++ Y+ F+  LR+  + P+  C     + + +   +Y+ V ++ ++ + +
Sbjct: 3   TITFDAGNATINKYATFMESLRNEAKDPSLKCYGIPMLPNTNSTIKYLLVKLQGASLKTI 62

Query: 106 TIGIDVMDMYVWGYKDNVKYKGKSRATFFKNTPKV----AKDNLFPDTTPRTT---TFLS 165
           T+ +   ++YV GY D   Y  K R   F +         ++ L P + PR      +  
Sbjct: 63  TLMLRRNNLYVMGYSD--PYDNKCRYHIFNDIKGTEYSDVENTLCPSSNPRVAKPINYNG 122

Query: 166 TYGSLERYAKV-GRVDLELTLKNLKACIISVYGKPEKELDNAVEAKFVLIAVQMVAEATR 225
            Y +LE+ A V  R +++L ++ L + I  + G  +      +EAKF+L+A+QMV+EA R
Sbjct: 123 LYPTLEKKAGVTSRNEVQLGIQILSSDIGKISG--QGSFTEKIEAKFLLVAIQMVSEAAR 182

Query: 226 FRFMEKGI-VNFDSSKAFKYKMVAFQNDWDPASQAIHKASPTCTTISPTLVISTIDYRQE 285
           F+++E  +  NF+   +   K++  + +W   S AIH  S       P  + +    +  
Sbjct: 183 FKYIENQVKTNFNRDFSPNDKVLDLEENWGKISTAIHN-SKNGALPKPLELKNADGTKWI 242

Query: 286 VKEVDEIKDDMGLLKF 292
           V  VDEIK D+GLL +
Sbjct: 243 VLRVDEIKPDVGLLNY 253

The following BLAST results are available for this feature:

BLAST of Spo21766.1 vs. NCBI nr
BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
BLAST of Spo21766.1 vs. TAIR (Arabidopsis)

BLAST of Spo21766.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902201889\|gb\|KNA14121.1\|	4.0e-178	100.	hypothetical protein SOVF_1105...	[more]
gi\|902201888\|gb\|KNA14120.1\|	4.0e-109	75.6	hypothetical protein SOVF_1105...	[more]
gi\|99646716\|emb\|CAK22417.1\|	1.6e-86	57.0	ribosome-inactivating protein ...	[more]
gi\|731354502\|ref\|XP_010688631.1\|	3.6e-86	57.0	PREDICTED: ribosome-inactivati...	[more]
gi\|18149181\|dbj\|BAB83507.1\|	2.9e-83	53.7	ribosome-inactivating protein ...	[more]

BLAST of Spo21766.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R3P2_SPIOL	2.8e-178	100.	rRNA N-glycosidase OS=Spinacia...	[more]
A0A0K9R3P9_SPIOL	2.8e-109	75.6	rRNA N-glycosidase OS=Spinacia...	[more]
Q1H8N0_BETVU	1.1e-86	57.0	rRNA N-glycosidase OS=Beta vul...	[more]
Q8VWY2_SPIOL	2.0e-83	53.7	rRNA N-glycosidase OS=Spinacia...	[more]
A0A0J8BRN0_BETVU	3.1e-68	50.0	rRNA N-glycosidase OS=Beta vul...	[more]

BLAST of Spo21766.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RIPP_MIRJA	1.6e-25	34.5	Antiviral protein MAP OS=Mirab...	[more]
RIPA_PHYAM	2.2e-19	27.1	Antiviral protein alpha OS=Phy...	[more]
RIPL2_PHYDI	2.5e-18	28.5	Ribosome-inactivating protein ...	[more]
RIP2_PHYDI	1.4e-16	29.3	Protein synthesis inhibitor PD...	[more]
RIPS_PHYAM	8.8e-16	26.9	Antiviral protein S OS=Phytola...	[more]

BLAST of Spo21766.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001574	Ribosome-inactivating protein	PFAM	PF00161	RIP	coord: 57..251 score: 1.4
IPR001574	Ribosome-inactivating protein	unknown	SSF56371	Ribosome inactivating proteins (RIP)	coord: 55..291 score: 2.75
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	3.40.420.10		coord: 45..215 score: 5.1
IPR016139	Ribosome-inactivating protein, subdomain 2	GENE3D	4.10.470.10		coord: 216..294 score: 8.2
IPR017988	Ribosome-inactivating protein conserved site	PROSITE	PS00275	SHIGA_RICIN	coord: 208..224 scor
IPR017989	Ribosome-inactivating protein subgroup	PRINTS	PR00396	SHIGARICIN	coord: 204..224 score: 1.3E-18coord: 56..69 score: 1.3E-18coord: 235..252 score: 1.3E-18coord: 170..184 score: 1.3E-18coord: 103..118 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0050896	response to stimulus
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0016310	phosphorylation
biological_process	GO:0008152	metabolic process
cellular_component	GO:0009505	plant-type cell wall
molecular_function	GO:0030598	rRNA N-glycosylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12171	0.71	Barchart \| Table
Spo24453	0.69	Barchart \| Table
Spo10023	0.66	Barchart \| Table
Spo15366	0.66	Barchart \| Table
Spo19773	0.66	Barchart \| Table
Spo23782	0.65	Barchart \| Table