Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCTAATTTCTTTTACTCTCGTATAATCGTACTTCTGCTACTTGAAGGAAACGGACAGAGGCGGAGAAAGGAAGAAATTGCCGGAAGCGTCCGACTTGACCCAATACATCAACACCGGCCTCGTCGGAGTATCCGAGTTTTTCCGCCATGGCGGGCGAGGAGAGAGAAATAAGAATGGGAGAAACCATGGAAAGTGTGGCATCTCCTACCAATTCTCAGCAAACTGGTACAATTTTTAATGATTTGATTCTATTTTTTAATTTATTTTCTTTGATTAATTAAATTGCAGTTTCAGCAAGATTTATAGTACTTCGAGTAGTAGAAATTTCTGATTCAGTAGATTAATTTTACTGATTTTGGTAGTTTCAGCTGTAATACTTAACTCGACATGGTAGTAGTTTTTTCAAGATTGGATTTTGGAACCCTAACTTTAAAGCCTTCAATTCTAGTGAATTTGAGCGTTTCACTTATTTGTTCTGAACTTATTAGAACTTATCCAAAAAAAAAATTAGTTCTAAATTGTACTTGGTTAACCTTATTTTTTCTTATATCAACTTATTTTTCCTGAAATAAGTAGAAATTAGGTGAAATAAGTTAAAATTAGGTGAACAGAAATGAGTAATACGACAACATTGTACATAATAACCTTTGTTTTTGGATTTTAGGGAAAAAAAATTTGTAGGCGAAGTTAGTATATGAATAATGCAAAAGTCTTACGGCCCATTTGCCGGTTGGTAGCCGGTCATAAATGGTGTCAATGGGAATGAATTTGATGTAATTTTGTAAGGAAAATCAATATCCATTCCCATGGTAATGCTAGTTTATTCAAAATGATCTATTTTTCTTTATAAATTTCCATTACCAACCGTTACCATTTGAGGAGTGGTATTAGGTGGGAATACAAATTTATGAAGAAAAACACCAAGTTTGAGACAAAAGTTCATTACCATGGACTTTATGATATTATTTTCTTGCCATTTATTACCGTTCCCACCATTTATTACCAGCTACCAAACGGGCCGTTAACGCATTGGGGATATTAAGGATATGAGGGAATTATATGACGTTTGTGGAAATTCTTCTTTAAAAGTTGAAACTATTGGTTCAATTATACTTCGTATCATTTTTGAGAAACCCAGAAACATGATGCTTCCCCTGTTGGTGTTGAACTCCTGTAAGCTGTCACTATGCTGAATTGCTGCCTGAATTTCAGTTTCAGACGATGATGAGATAGATTACTCCACGAAACCGGAATTTTATGATTCTGATCTTGATGTCAAGGATGAATCATGGGTAACCAGCAAAAGGAAAGGTCAACGAACAGATGCTGTGCTCAGCTGTCCTGCTTGTTTCACCACTCTTTGCATTGACTGTCAAAGGTATAGTTCTTTTAAAATCCCTGGATCATGAATTTTCGTTTTGACATATGTTGGTAGGAAAACAAATATGTAGATAAGTCTTGATTGTTAGTAAATCAGTGCAAAATTCTGGAAGTTCAGGATTTTTTTATTGAAAAAACTTATGTAGATCAGTGACGTTAATCTATACCTGAATATTGATCATTTGAAGAACAAGGTACAAAATTACATGATAATTTAGCATTGTAAGTAAGATGCTAGAATGAATTAATGATGCGCCTGAAGCGAAGAGCTTAAGTTAGCTGCTCCCGTAAAAGTTTCAGGTTCCCTTTGCGTGGTGGTGTTCCTGTTGAGTCCTGTGAGTTGATACGTGTTTTGTCTCCACTGTTATTTCTGTTGGAAAGATAACAGTTACTCACACTGGAACAAATATTTTTTGCCTAAGAGAAGAAAACTAAATAGGATAGCAAACTACTCACTTGAATTTGAAGATTTTTCTAATAACACGTGAGAATAAAATGTTTCAACTTCAATCATGTAATTTGAATGAATACATTGTTTACTTGCAGTCTTTATAAAAGCTAGGAAAGATTGGTTTATAATCTGAAAATCGTACACCTTTAATTTTTCTTCCCTTAAACTTCTATTTTTCCCTGACCTCCATATCTAGTAACAACAATTTATAACTTTTTATTTCTCTTTCCCAATAGCAAGGAACTATCCCGACAAATGTTCCCCTTTCGAGTTATTGAGATTCTAGATGATCTAGGTATTTCCCGTAAAACATCAAGTTTTTGCTGGGAGGATGTCTATTTCATAATGAACCATCGTGGTCAGTACAATTTACACTTTTCATTTCTCTTCCCCCATAATGAGGAATTATTCCAACAAATTTCTCCCTTTCGAGTTATGTGAAGATTATGATCTAGATAATCTCTCTTTTCCCAACAAAAATCAAGTTTTTGCTTGCTTAATGTCAATTTCATATATGAAGAACCATTGTGGTCAGTGCGATTCTTTTTCAGTTGTAGTAGCCCGGCTTCAGAAACTTCTCATATCCAGTGATACTAGACATACATACTTGTTTATGCCGTGCGTGAAAGGTAGGAATTTGGTCAAGTTGATAATGTGGGATTGATAATGAAATATAATTAATGAGTTGAGCATGTACATTGGGGCTCTTAGAGTGTCTCTCCAAGTAGCTCTCCAACAAGAACTATCTCTTGGCCAACGTTGGGGCTCTTGAGAGGCTATGTGAGTTATAGTAATCATTCCCAACATTTTCAGCTCACTTATTTACCTGCATCAAGTTAAAAGTTAACTCCCAGGTAGACATGTTTGTGTTTCTTCAACATATTTCGTGTACAAATATGTGTTTATAGGTGACAACTCAGAGCTCCCATTTAATCACAAGTTATCTTCAGGTTGCACACTAGTACTAGTGGTGGTCAGGAGTGGTAAAATATACAGTGACAGAACACCAGTTGTTCTCTTAAAAATGGTGTAATGTAAAAAGGCATAGACATGTTCTATCTTGTAATCTTGCATCCTAAATTATTATTGGAGATAAATCATTTGTCAAGCCTCCCATCATTAGCTTAACTTTTAAGCTTTTGGCTGAGTTGGTTCTCTTACTGAAACGCGGTGTTTGGTATCCCGTGCAGGCATGAAATCTACCTGACCCAGTACAGGGCGATGTTTGTAGTTAACTGTGAAATAACTGAGAAAAAGGTATTCCCGCAAGGAAGCAAGAAACGGAGAAAGAATAGGAAGGCGATAGAGGCTGTACAAGCTGAAGAAGCAGCAAGTTCAGCGAGTGTTGAAGCAGCTAGACAAGTTTGCTGCTCAGTATGTTCAACAGAGGTTGGAGTTTTTGACAAGGATGACGTTTATCATTTCTACGATGTCCTTCCAAGCGAGTCTTAAGCGTCCCACCAACTTATTACCTCGGTTTCTCCTGTGGAAGATGCGGGCCATAGGCCTCGTAGCTACTTGTAAGTTGTAATGTATGTGCTGATATGCTAATATGCATGTTTTAGATCATAATTTGTATGAGTTATATGCTACGAAGTAGGTAACTTGAATATGGGCAGTGGCAGTTTTCGATTTCCTTTGTATATAATTCTTCTTTTTTTCACATCCAGTTGAGCTGATACAGTATTAGAAATACTTTCTCCGTAGTGCCATGCGTTCTTTCTCAAGTAATGACACTCCTTAATGCTGGGTTTAAAG ACCTAATTTCTTTTACTCTCGTATAATCGTACTTCTGCTACTTGAAGGAAACGGACAGAGGCGGAGAAAGGAAGAAATTGCCGGAAGCGTCCGACTTGACCCAATACATCAACACCGGCCTCGTCGGAGTATCCGAGTTTTTCCGCCATGGCGGGCGAGGAGAGAGAAATAAGAATGGGAGAAACCATGGAAAGTGTGGCATCTCCTACCAATTCTCAGCAAACTGTTTCAGACGATGATGAGATAGATTACTCCACGAAACCGGAATTTTATGATTCTGATCTTGATGTCAAGGATGAATCATGGGTAACCAGCAAAAGGAAAGGTCAACGAACAGATGCTGTGCTCAGCTGTCCTGCTTGTTTCACCACTCTTTGCATTGACTGTCAAAGGCATGAAATCTACCTGACCCAGTACAGGGCGATGTTTGTAGTTAACTGTGAAATAACTGAGAAAAAGGTATTCCCGCAAGGAAGCAAGAAACGGAGAAAGAATAGGAAGGCGATAGAGGCTGTACAAGCTGAAGAAGCAGCAAGTTCAGCGAGTGTTGAAGCAGCTAGACAAGTTTGCTGCTCAGTATGTTCAACAGAGGTTGGAGTTTTTGACAAGGATGACGTTTATCATTTCTACGATGTCCTTCCAAGCGAGTCTTAAGCGTCCCACCAACTTATTACCTCGGTTTCTCCTGTGGAAGATGCGGGCCATAGGCCTCGTAGCTACTTGTAAGTTGTAATGTATGTGCTGATATGCTAATATGCATGTTTTAGATCATAATTTGTATGAGTTATATGCTACGAAGTAGGTAACTTGAATATGGGCAGTGGCAGTTTTCGATTTCCTTTGTATATAATTCTTCTTTTTTTCACATCCAGTTGAGCTGATACAGTATTAGAAATACTTTCTCCGTAGTGCCATGCGTTCTTTCTCAAGTAATGACACTCCTTAATGCTGGGTTTAAAG ATGGCGGGCGAGGAGAGAGAAATAAGAATGGGAGAAACCATGGAAAGTGTGGCATCTCCTACCAATTCTCAGCAAACTGTTTCAGACGATGATGAGATAGATTACTCCACGAAACCGGAATTTTATGATTCTGATCTTGATGTCAAGGATGAATCATGGGTAACCAGCAAAAGGAAAGGTCAACGAACAGATGCTGTGCTCAGCTGTCCTGCTTGTTTCACCACTCTTTGCATTGACTGTCAAAGGCATGAAATCTACCTGACCCAGTACAGGGCGATGTTTGTAGTTAACTGTGAAATAACTGAGAAAAAGGTATTCCCGCAAGGAAGCAAGAAACGGAGAAAGAATAGGAAGGCGATAGAGGCTGTACAAGCTGAAGAAGCAGCAAGTTCAGCGAGTGTTGAAGCAGCTAGACAAGTTTGCTGCTCAGTATGTTCAACAGAGGTTGGAGTTTTTGACAAGGATGACGTTTATCATTTCTACGATGTCCTTCCAAGCGAGTCTTAA MAGEEREIRMGETMESVASPTNSQQTVSDDDEIDYSTKPEFYDSDLDVKDESWVTSKRKGQRTDAVLSCPACFTTLCIDCQRHEIYLTQYRAMFVVNCEITEKKVFPQGSKKRRKNRKAIEAVQAEEAASSASVEAARQVCCSVCSTEVGVFDKDDVYHFYDVLPSES Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21799.1 vs. NCBI nr
Match: gi|902196228|gb|KNA13075.1| (hypothetical protein SOVF_120110 [Spinacia oleracea]) HSP 1 Score: 312.8 bits (800), Expect = 3.700e-82 Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Spo21799.1 vs. NCBI nr
Match: gi|731354556|ref|XP_010688660.1| (PREDICTED: E2F-associated phosphoprotein [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 267.7 bits (683), Expect = 1.400e-68 Identity = 136/159 (85.53%), Postives = 145/159 (91.19%), Query Frame = 1
BLAST of Spo21799.1 vs. NCBI nr
Match: gi|1012358041|gb|KYP69225.1| (E2F-associated phosphoprotein [Cajanus cajan]) HSP 1 Score: 204.1 bits (518), Expect = 1.900e-49 Identity = 100/150 (66.67%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of Spo21799.1 vs. NCBI nr
Match: gi|356536421|ref|XP_003536736.1| (PREDICTED: E2F-associated phosphoprotein isoform X1 [Glycine max]) HSP 1 Score: 203.0 bits (515), Expect = 4.200e-49 Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 1
BLAST of Spo21799.1 vs. NCBI nr
Match: gi|951016768|ref|XP_014511200.1| (PREDICTED: E2F-associated phosphoprotein [Vigna radiata var. radiata]) HSP 1 Score: 199.5 bits (506), Expect = 4.600e-48 Identity = 98/150 (65.33%), Postives = 118/150 (78.67%), Query Frame = 1
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0N2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120110 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 2.600e-82 Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMM5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202720 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 9.600e-69 Identity = 136/159 (85.53%), Postives = 145/159 (91.19%), Query Frame = 1
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Match: A0A151TQ73_CAJCA (E2F-associated phosphoprotein OS=Cajanus cajan GN=KK1_008413 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.300e-49 Identity = 100/150 (66.67%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RY70_GLYSO (E2F-associated phosphoprotein OS=Glycine soja GN=glysoja_013583 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.900e-49 Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 1
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Match: A0A0R4J4D8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G285700 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.900e-49 Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 1
BLAST of Spo21799.1 vs. ExPASy Swiss-Prot
Match: EAPP_MOUSE (E2F-associated phosphoprotein OS=Mus musculus GN=Eapp PE=1 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 1.300e-26 Identity = 66/163 (40.49%), Postives = 98/163 (60.12%), Query Frame = 1
BLAST of Spo21799.1 vs. ExPASy Swiss-Prot
Match: EAPP_HUMAN (E2F-associated phosphoprotein OS=Homo sapiens GN=EAPP PE=1 SV=4) HSP 1 Score: 119.8 bits (299), Expect = 2.900e-26 Identity = 68/165 (41.21%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Spo21799.1 vs. TAIR (Arabidopsis)
Match: AT5G08320.1 (E2F-associated phosphoprotein, C-terminal (InterPro:IPR019370)) HSP 1 Score: 171.8 bits (434), Expect = 3.600e-43 Identity = 82/151 (54.30%), Postives = 111/151 (73.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21799.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21799.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21799.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 2
BLAST of Spo21799.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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