Spo21852 (gene)

Overview
NameSpo21852
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionVesicle-associated protein 1-4 (Plant VAP homolog 14) (AtPVA14) (VAMP-associated protein 1-4)
LocationSpoScf_23691 : 24 .. 1110 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGTTGGAGGAGCCCACAAAGTTTGAAAGAAAAGACATAGACATCGTCGACACTCTTGACACTGTTCCACGTCTCCTCTGTCTCTCTCTCGTCTCTCCTCCCTCTTTCTCTCTCCTCTAACACTTGTAATTTCAAAACCCAATTTCTTCATATTTCACCACTTTTCATAGATCGTTCTCCAAATTCAGGTGTGAATTTCACTTTGTTTTTTCTTTTTCTGGGTAATCTCTAAGAAAATGAATTCAGGGGAATTTCTCAGCATTCAACCCCAAGAACTTCAATTCCCATGTATGTTCTCGTACTTCCTGCCTTAATTTCTTCAAGTTTCTGTTTTTTTTCAATTCAATTTTTAATTTTGTGTTCTTGAGTTTTGATTACATGCAGTTGAGTTGAACAAGCAGATCTCTTGTACCATGCAATTGACCAATCTTACTGACAGCTATGTTGCTTTTAAGGTACCCCAAATCAATTTTCAATTTTCAATTTTCAATTTTTGTTTTTTGGGTGAAATTTTGACTGGGTTTTATTTTCCCCCAAATTTGCAGGTGAAAACAACGAATCCTAAGAAGTATTCTGTACGGCCAAATACTGGGATTGTCTTGCCACATTCCAACCATGATCTCTTAGGTTCTTTTTCTTTCTATCTTGATTTTCAATGTTGTTAATTTCAGCTTAATTCTTCTGGGTTTGAGTCAAATTTTGTGATAATCAACAGGAATGATGAAATTTTGTCAATTAGAACCCTGGGCTCGGTCTGGAAATAATAGTCATATTATAAATACTAATTTAAGATGTTCAGAAAAAGTTGTCACATTTAAGTAATTTTGTACAGGAGTAATGTTTATGATTGGTTTTGCAAACTACTCTAAATAATTATTTCTCAAATATTGACTTAAGTTTTGTTGGGTTGGGGAATTAATTGTAGTGACAATGCAAGCACAAAAAGAAGCACCTGCTGACATGCAATGCAGAGACAAATTTCTTCTTCAGAGTGTGATTGCCAGCCCTGAAACTACCATTAAGGATATCACTTCTGATATGGTAATCCCTTTAACTATTGCCTTATCTCACTTTTTATAGCACAT

mRNA sequence

TGATGTTGGAGGAGCCCACAAAGTTTGAAAGAAAAGACATAGACATCGTCGACACTCTTGACACTGTTCCACGTCTCCTCTGTCTCTCTCTCGTCTCTCCTCCCTCTTTCTCTCTCCTCTAACACTTGTAATTTCAAAACCCAATTTCTTCATATTTCACCACTTTTCATAGATCGTTCTCCAAATTCAGGTGTGAATTTCACTTTGTTTTTTCTTTTTCTGGGTAATCTCTAAGAAAATGAATTCAGGGGAATTTCTCAGCATTCAACCCCAAGAACTTCAATTCCCATTTGAGTTGAACAAGCAGATCTCTTGTACCATGCAATTGACCAATCTTACTGACAGCTATGTTGCTTTTAAGGTGAAAACAACGAATCCTAAGAAGTATTCTGTACGGCCAAATACTGGGATTGTCTTGCCACATTCCAACCATGATCTCTTAGTGACAATGCAAGCACAAAAAGAAGCACCTGCTGACATGCAATGCAGAGACAAATTTCTTCTTCAGAGTGTGATTGCCAGCCCTGAAACTACCATTAAGGATATCACTTCTGATATGGTAATCCCTTTAACTATTGCCTTATCTCACTTTTTATAGCACAT

Coding sequence (CDS)

ATGAATTCAGGGGAATTTCTCAGCATTCAACCCCAAGAACTTCAATTCCCATTTGAGTTGAACAAGCAGATCTCTTGTACCATGCAATTGACCAATCTTACTGACAGCTATGTTGCTTTTAAGGTGAAAACAACGAATCCTAAGAAGTATTCTGTACGGCCAAATACTGGGATTGTCTTGCCACATTCCAACCATGATCTCTTAGTGACAATGCAAGCACAAAAAGAAGCACCTGCTGACATGCAATGCAGAGACAAATTTCTTCTTCAGAGTGTGATTGCCAGCCCTGAAACTACCATTAAGGATATCACTTCTGATATGGTAATCCCTTTAACTATTGCCTTATCTCACTTTTTATAG

Protein sequence

MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVLPHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDMVIPLTIALSHFL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo21852.1Spo21852.1mRNA


Homology
[Close]
BLAST of Spo21852.1 vs. NCBI nr
Match: gi|902230066|gb|KNA21696.1| (hypothetical protein SOVF_040250 [Spinacia oleracea])

HSP 1 Score: 215.3 bits (547), Expect = 5.700e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL
Sbjct: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM
Sbjct: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 107
[Close]
BLAST of Spo21852.1 vs. NCBI nr
Match: gi|731361098|ref|XP_010692173.1| (PREDICTED: vesicle-associated protein 1-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.7 bits (504), Expect = 5.600e-48
Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           MN GEFLSIQPQELQFPFELNKQISCTMQLTN T+SYVAFKVKTTNPKKYSVRPNTGIVL
Sbjct: 1   MNPGEFLSIQPQELQFPFELNKQISCTMQLTNNTNSYVAFKVKTTNPKKYSVRPNTGIVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           PHS HDLLVTMQAQKE+PADMQC+DKFLLQSVI +PE T+KDITSDM
Sbjct: 61  PHSTHDLLVTMQAQKESPADMQCKDKFLLQSVITTPEITVKDITSDM 107
[Close]
BLAST of Spo21852.1 vs. NCBI nr
Match: gi|1012330636|gb|KYP42149.1| (Vesicle-associated membrane protein/synaptobrevin-binding protein [Cajanus cajan])

HSP 1 Score: 171.8 bits (434), Expect = 7.300e-40
Identity = 82/107 (76.64%), Postives = 95/107 (88.79%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M+SGE L IQPQELQFPFEL KQISC++QL+N TD+YVAFKVKTTNPKKY VRPNTG+V+
Sbjct: 1   MSSGELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVM 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S+ D++VTMQAQKEAP DMQC+DKFLLQSV+ASP  T KDIT +M
Sbjct: 61  PRSSCDIIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEM 107
[Close]
BLAST of Spo21852.1 vs. NCBI nr
Match: gi|658035800|ref|XP_008353433.1| (PREDICTED: vesicle-associated protein 1-2-like [Malus domestica])

HSP 1 Score: 171.8 bits (434), Expect = 7.300e-40
Identity = 82/107 (76.64%), Postives = 96/107 (89.72%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++GE LSI+PQELQFPFEL KQISC++QL+N T+ YVAFKVKTTNPKKY VRPNTG+VL
Sbjct: 1   MSTGELLSIEPQELQFPFELRKQISCSLQLSNKTNDYVAFKVKTTNPKKYCVRPNTGVVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  D++VTMQAQKEAP DMQC+DKFLLQSV+ASP TT KDIT++M
Sbjct: 61  PRSTCDVIVTMQAQKEAPLDMQCKDKFLLQSVVASPGTTTKDITAEM 107
[Close]
BLAST of Spo21852.1 vs. NCBI nr
Match: gi|658012741|ref|XP_008341648.1| (PREDICTED: vesicle-associated protein 1-2 [Malus domestica])

HSP 1 Score: 171.8 bits (434), Expect = 7.300e-40
Identity = 82/107 (76.64%), Postives = 96/107 (89.72%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++GE LSI+PQELQFPFEL KQISC++QL+N T+ YVAFKVKTTNPKKY VRPNTG+VL
Sbjct: 1   MSTGELLSIEPQELQFPFELRKQISCSLQLSNKTNDYVAFKVKTTNPKKYCVRPNTGVVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  D++VTMQAQKEAP DMQC+DKFLLQSV+ASP TT KDIT++M
Sbjct: 61  PRSTCDVIVTMQAQKEAPLDMQCKDKFLLQSVVASPGTTTKDITAEM 107
[Close]
BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040250 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.000e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL
Sbjct: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM
Sbjct: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 107
[Close]
BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGD9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018610 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.900e-48
Identity = 97/107 (90.65%), Postives = 102/107 (95.33%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           MN GEFLSIQPQELQFPFELNKQISCTMQLTN T+SYVAFKVKTTNPKKYSVRPNTGIVL
Sbjct: 1   MNPGEFLSIQPQELQFPFELNKQISCTMQLTNNTNSYVAFKVKTTNPKKYSVRPNTGIVL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           PHS HDLLVTMQAQKE+PADMQC+DKFLLQSVI +PE T+KDITSDM
Sbjct: 61  PHSTHDLLVTMQAQKESPADMQCKDKFLLQSVITTPEITVKDITSDM 107
[Close]
BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Match: A0A151RHW4_CAJCA (Vesicle-associated membrane protein/synaptobrevin-binding protein OS=Cajanus cajan GN=KK1_036463 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.100e-40
Identity = 82/107 (76.64%), Postives = 95/107 (88.79%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M+SGE L IQPQELQFPFEL KQISC++QL+N TD+YVAFKVKTTNPKKY VRPNTG+V+
Sbjct: 1   MSSGELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVM 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S+ D++VTMQAQKEAP DMQC+DKFLLQSV+ASP  T KDIT +M
Sbjct: 61  PRSSCDIIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEM 107
[Close]
BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Match: A0A0B2R252_GLYSO (Vesicle-associated protein 1-2 OS=Glycine soja GN=glysoja_046566 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.600e-40
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M+SGE L IQPQELQFPFEL KQISC++QL+N TD+YVAFKVKTTNPKKY VRPNTG+V+
Sbjct: 1   MSSGELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVM 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  D++VTMQAQKEAP DMQC+DKFLLQSV+ASP  T KDIT +M
Sbjct: 61  PRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEM 107
[Close]
BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Match: I1JKU6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G032100 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.600e-40
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M+SGE L IQPQELQFPFEL KQISC++QL+N TD+YVAFKVKTTNPKKY VRPNTG+V+
Sbjct: 1   MSSGELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVM 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  D++VTMQAQKEAP DMQC+DKFLLQSV+ASP  T KDIT +M
Sbjct: 61  PRSTCDVIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEM 107
[Close]
BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Match: VAP11_ARATH (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.000e-37
Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++ E L+++P +LQFPFEL KQISC++ LTN TD+ VAFKVKTTNPKKY VRPNTG+VL
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  ++LVTMQAQKEAP+DMQC+DKFLLQ VIASP  T K++T +M
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEM 123
[Close]
BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Match: VAP12_ARATH (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 9.800e-37
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1 

		  

Query: 3   SGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVLPH 62
           S E L+I P +LQFPFEL KQISC++ L N TD+YVAFKVKTTNPKKY VRPNTG+V P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  SNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           S+ ++LVTMQAQKEAPAD+QC+DKFLLQ V+ASP  T KD+T +M
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEM 106
[Close]
BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Match: VAP14_ARATH (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 6.600e-33
Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 1 

		  

Query: 3   SGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVLPH 62
           S E L I P ++QFP ELNK++SC++ LTN T++YVAFK KTTN KKY VRPN G+VLP 
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232

Query: 63  SNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           S+ ++LV MQA KEAPADMQCRDK L Q  +  PETT KD+TS+M
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEM 277
[Close]
BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Match: VAP13_ARATH (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 7.300e-32
Identity = 67/108 (62.04%), Postives = 87/108 (80.56%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSY-VAFKVKTTNPKKYSVRPNTGIV 60
           M +G+ ++I P EL+FPFEL KQ SC+MQLTN T +  VAFKVKTTNP+KY VRPNTG+V
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  LPHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           LP  + ++ VTMQAQKEAP DMQC+DKFL+Q+V+ S  TT K++ ++M
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEM 108
[Close]
BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Match: VAP31_ARATH (Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.100e-30
Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++ E L I+P  LQFPFEL KQ+SC++ LTN TD+ VAFKVKTTN   Y VRPN G++L
Sbjct: 1   MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S   +LVTMQAQKE P+DMQ  +KF++QSV+ASP  T K++T +M
Sbjct: 61  PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREM 107
[Close]
BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Match: AT3G60600.1 (vesicle associated protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.100e-38
Identity = 74/107 (69.16%), Postives = 91/107 (85.05%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++ E L+++P +LQFPFEL KQISC++ LTN TD+ VAFKVKTTNPKKY VRPNTG+VL
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S  ++LVTMQAQKEAP+DMQC+DKFLLQ VIASP  T K++T +M
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEM 123
[Close]
BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Match: AT2G45140.1 (plant VAP homolog 12)

HSP 1 Score: 154.1 bits (388), Expect = 5.500e-38
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 1 

		  

Query: 3   SGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVLPH 62
           S E L+I P +LQFPFEL KQISC++ L N TD+YVAFKVKTTNPKKY VRPNTG+V P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  SNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           S+ ++LVTMQAQKEAPAD+QC+DKFLLQ V+ASP  T KD+T +M
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEM 106
[Close]
BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Match: AT1G51270.3 (structural molecules;transmembrane receptors;structural molecules)

HSP 1 Score: 141.4 bits (355), Expect = 3.700e-34
Identity = 67/105 (63.81%), Postives = 82/105 (78.10%), Query Frame = 1 

		  

Query: 3   SGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVLPH 62
           S E L I P ++QFP ELNK++SC++ LTN T++YVAFK KTTN KKY VRPN G+VLP 
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232

Query: 63  SNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           S+ ++LV MQA KEAPADMQCRDK L Q  +  PETT KD+TS+M
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEM 277
[Close]
BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein)

HSP 1 Score: 137.9 bits (346), Expect = 4.100e-33
Identity = 67/108 (62.04%), Postives = 87/108 (80.56%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSY-VAFKVKTTNPKKYSVRPNTGIV 60
           M +G+ ++I P EL+FPFEL KQ SC+MQLTN T +  VAFKVKTTNP+KY VRPNTG+V
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  LPHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           LP  + ++ VTMQAQKEAP DMQC+DKFL+Q+V+ S  TT K++ ++M
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEM 108
[Close]
BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Match: AT2G23830.1 (PapD-like superfamily protein)

HSP 1 Score: 132.5 bits (332), Expect = 1.700e-31
Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 1 

		  

Query: 1   MNSGEFLSIQPQELQFPFELNKQISCTMQLTNLTDSYVAFKVKTTNPKKYSVRPNTGIVL 60
           M++ E L I+P  LQFPFEL KQ+SC++ LTN TD+ VAFKVKTTN   Y VRPN G++L
Sbjct: 1   MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60

Query: 61  PHSNHDLLVTMQAQKEAPADMQCRDKFLLQSVIASPETTIKDITSDM 108
           P S   +LVTMQAQKE P+DMQ  +KF++QSV+ASP  T K++T +M
Sbjct: 61  PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREM 107
The following BLAST results are available for this feature:
BLAST of Spo21852.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902230066|gb|KNA21696.1|5.7e-53100.hypothetical protein SOVF_0402... [more]
gi|731361098|ref|XP_010692173.1|5.6e-4890.6PREDICTED: vesicle-associated ... [more]
gi|1012330636|gb|KYP42149.1|7.3e-4076.6Vesicle-associated membrane pr... [more]
gi|658035800|ref|XP_008353433.1|7.3e-4076.6PREDICTED: vesicle-associated ... [more]
gi|658012741|ref|XP_008341648.1|7.3e-4076.6PREDICTED: vesicle-associated ... [more]
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BLAST of Spo21852.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RQ92_SPIOL4.0e-53100.Uncharacterized protein OS=Spi... [more]
A0A0J8BGD9_BETVU3.9e-4890.6Uncharacterized protein OS=Bet... [more]
A0A151RHW4_CAJCA5.1e-4076.6Vesicle-associated membrane pr... [more]
A0A0B2R252_GLYSO8.6e-4076.6Vesicle-associated protein 1-2... [more]
I1JKU6_SOYBN8.6e-4076.6Uncharacterized protein OS=Gly... [more]
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BLAST of Spo21852.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
VAP11_ARATH2.0e-3769.1Vesicle-associated protein 1-1... [more]
VAP12_ARATH9.8e-3770.4Vesicle-associated protein 1-2... [more]
VAP14_ARATH6.6e-3363.8Vesicle-associated protein 1-4... [more]
VAP13_ARATH7.3e-3262.0Vesicle-associated protein 1-3... [more]
VAP31_ARATH3.1e-3059.8Vesicle-associated protein 3-1... [more]
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BLAST of Spo21852.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT3G60600.11.1e-3869.1vesicle associated protein[more]
AT2G45140.15.5e-3870.4plant VAP homolog 12[more]
AT1G51270.33.7e-3463.8structural molecules;transmemb... [more]
AT4G00170.14.1e-3362.0Plant VAMP (vesicle-associated... [more]
AT2G23830.11.7e-3159.8PapD-like superfamily protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000535Major sperm protein (MSP) domainPFAMPF00635Motile_Spermcoord: 7..105
score: 1.1
IPR000535Major sperm protein (MSP) domainPROFILEPS50202MSPcoord: 6..119
score: 2
IPR008962PapD-likeGENE3D2.60.40.360coord: 4..102
score: 4.5
IPR008962PapD-likeunknownSSF49354PapD-likecoord: 2..99
score: 7.59
IPR016763Vesicle-associated membrane-protein-associated proteinPANTHERPTHR10809VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEINcoord: 1..107
score: 6.1
NoneNo IPR availablePANTHERPTHR10809:SF50VESICLE-ASSOCIATED PROTEIN 1-1-RELATEDcoord: 1..107
score: 6.1

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006629 lipid metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005622 intracellular
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0005525 GTP binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo061650.71Barchart | Table
Spo088680.71Barchart | Table
Spo051940.68Barchart | Table
Spo032140.65Barchart | Table