Spo21873 (gene) | SpinachBase

Overview


Name	Spo21873
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Outer envelope protein 61 (Tetratricopeptide repeat domain-containing protein 7)
Location	Super_scaffold_232 : 1578811 .. 1586910 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCCCTCCTTTACCAAATTTCATTCCCCGCCTTTTGTTTCTCGCAGCCTGCTTCCTTCTCGTTGGTTGCTGCCCTAACACCACTGTTTCTTTCCCAAGTCCCAACAACGTCCACCCCAAAAGCACCACCGCGTCATGGCTGCCATATCCCCCCATCCGCGTTTCTCCCCCCCTTGCGCGACTCTCCTGCGTTTCTGGAAGCCGTGTCGCCTACTACTGGAAGCTTCCCCCCGTGTTTAATTCTCCGACTCGCCCACTGTTGGAAACCGCCTCATCGCCTCTCCTGCGTGCACTTCCGCCGTCGCTGGCTCTCCTCCCGTTGGCTACCCTAGGTTATTTCTGCGATTTTATTAATTATCACCATTTTTGTTAATTTTGTTCTGCAAATTTGATAATTATCCCTCAAAGTACCAATGAGTGAATTAACCACCAGTTAGTTTTGTTAGTTCTGTTAACCGCAGGTTAAATTTATTAAAATTTTTGCAATTTTGTGAATTAACCACCAGTTTTAAGCCCTGTAAGTAGTTTTGAGTTGCCATTTGATGAATCAGTGTAGAAGTGAAAGTCTGTTGGAAGTGATATTATACCTCCTTTGGATCTGTTAGCATCCCAACCATCGAGAACGAATTGCATCCCAACCATATAAGAATGAATTGTATCCCAACCATATAAGAATGAATTGCATCCTGATTTTCAGCAATTGAAAAAATGTAAAAGTTAGCAATTGATGTAAGCACCTTTTGGAAGTGTCCAACCTAGTTAACGATGTCAGCAAGGTGTGCAACCTTTCCGGGATAAGTGTCAACACCAGTAGCTAATACTACCGCCTCTAATTCACCTTGTTTACGGGTTGAACCAGAGAAGACCTCACTACTATACCATAACAGTTCTTTGAGTTATCCCTCGAAATAATTAGTTTGATAATGAAAGCTGGAAGTTTATGGGATTAATGCTTGCTATATATTCTTCCGTTGTGTGTTGGTCGTGTTGTATACCTTGATTCTGATGTGGTTGTTGTTGATGATATATCCACACTTTACAATTTCAACTTAGTTGATGACAAAGTATTGTCTGCCCCTGAGTATTGTAATGCCAACTTTAATACCTATTTGAACTTGCATGTTAATAATTAGTCAAATAATTGAATCTGTTTTTATTTGAAATCACATGAATATGCCTAACATGCTTGTGCCTGTAACTTTTACAATTCGTTTATGGAAATGAGCTTCACAACCAGGGAAATATCATGATGCTGCACAGAAATACTTGCGTGTGAGTGTGCTATTGTTTTCTTCATTATAAAGATACATTTTGGTTAGTAATCCCATCAGTTATCATTTTTATTGGTAGGCAAAAAACAATTGACAAGGGGCTCCTGTTGCCTGAAGTATAACACTGCAGTTGGCATGCTCAGTTAATCTGATGTCATGTTACTTAAAATCTAGGCAATTTCATGACTGCGTCATATAAGGCTTTGAAGTATTTTTTAAATCATTTTCCTGAAAACTACTCTGTATGGCAATAAGATGTTATTGTTTCAGTGACTTCACCTCATATTTGTCAATGTTGCACTTGGTTTACTAATGGCCATGTTTTCCCGCCTATCACCCCCAATACTTTTAAGCTAGTGTGGGATCGAGGGGCAATTTAATTTTCTGATTTTGTCAATTTTGAGAGTATTATTTTGGTTCTTTGACTTCGTAAATTTATGTTTTTGTTTCAGGTCTTGGCCTGCGATGAAAAGAATGTCAAGGCCTTATACCTTAGGGGCCAAGCATGCAAAGAATTAGGTCAATTAGAGGTAATTATCTGTAATTTGTTTCTTTTTGGCTGGGTAATGGTAAGTTTATATTTATATGGCAGTGAGTTTCTATATAAGGGCTTCAATGTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGATATCTCTGGTTACTTTCTGTATTCAATTTGTCCTAAAATGTTGTTTTTGATCTGGCAAAGGCACTTGAAGTTACCCCTGGCGATGACACAATTGCTGAAGTTTTAAGGTATTTTGGTGTTTTTTTCTGATGTTTTTGACTCTGCATTATTTGATGTTAACCAGTGCATACCTTTTTAATTGTGTCAAGTGTGATGCTTTGCCAAGTTCTAGAGAATTTATAGTACGAGTATTTGTAAAGATTTTGTTAGGTTTGCTAGTTTCATGCAAAAAAAGACTTCTTATATTTATTGAGGTTAACATGATCATATCTGAATTGAGGTTTTTTTCATTCATACCACAGGGAGGCTAAAGAAAGTCTAGGAAAAGGAGATGTCACGCGAACTTCAACAGGTATTATATTACACGAGTAGTTAGGGTAACAAAACTTTTTGCTTTTGTTGTTATTGGCCTTTTTTTAGTGGAATCATTTTTATTGATGAGTCTTACAGAATTGGTAAAAGTGAAAAGACCAGATAAACTTCCTACATGACATATAATAAATAGGTTGGTCTCTTTTTCTTGCTTGTCTGCAGATCATTCCCAGCTCTTTGGGTTCATCAAGTGGTAGATTGAGTTTAAAGTCTCGTTCAAAATGTACCTGTTGATGATATTGATGTTGTTGGTGAGAAGAGCAACTCTTCTGGTTTATATTCCAATCCAGGAAGTTCATCCCAATCAAGTTTTCCTACATCAATGGGTGATATGCAAGAACCGATGAGAAAGAAGATGAAGATCTTGCCATGAGAACAGTGAGTTGGCTGATAATTATCGTTTCGGAATTGCATTTTATATGTTTCTTAACCTATAAGTGCAACTCTAATTTAAAATTTGAGATGAGATATTTAATGCCTCTAGAATGCTGATGTATTCTGTTGTTGTTATGGCATCTATCAGGTGTTCTCTTTGATGTTGAAAATTATGAGTCCATATATGATGGCCAGCTTGAGTGAGCAATTAATTTGGCCTTAAGCTTCCAAAGAAGACGCTGCAAAAGCTCAAAAATCCATTATAACATTGTCACCTGAAGATCTGGATAAAATGGTACTTTATGTTTCTATCAAATTTCTCTAGTTGTCTTAACGAGTCACCATACTCACCAAAGTATTACATTATTTCGAAAAGATATCAATGAGTTTCCAATTTCAACTATGTACCAAAAATGTGTTGCCTGATGAGCGAAAACGGTTATTTTAGTCAAAATATGACATATAACGATCAAACAAGCCATAAATGTGCATAACTTAGCCGAAGTAGCTGAGAATAAGTCTTAGAAACATAAAACTAAGTATAATAAACATGTAAGGGTTATAGAACACCTATTTAGATTCATTAGTTGAGAGTTGGGAGCGAAAATGATCATCATAGTCAAAATATGACGTATAACGGTCAAACGAGCGTTAAATGTACATAACTTGACCAAATTGGGTGAGAATCAGTCTTAGCTACATAAAACTAAGTATATTAAACATGTAAAGGGTTTTGAAAACCTATTTAGGTTCATTAGTTAAGAGTTTGGAGCGAAAACGACAATTTAAGTCAAAATATTATATAACAATAAAACGAGCCTTAAATTTGCATAACATAACCAATATAGCAGATAATGAGTCTTTTCTACCTAATACCAAGAATATTAAACATGTAAATGGTTTTAAATACCTATTTAGGTTCATTAGTTGATAGTTGGGACCGAAAATGGTTGTTTTAGTCAAATTATGACATATAACAATTAAACCAGACTTAAATATGCATAACTTAACCGAAGTAGCTAAGAATGAGCCTTAAAAACATAAAAATGAGTATACTAAAAATGTAAATGGTTTAGAATACCTATTTATCTTCATTAGATGTGAGTTGGCCAAAAATGAGTATAACTAACAAACAAGCCTTAAATGTGCATAACTTGACATAAGTAGATGAAAATGAGTCTTATCAACCTAATACTAAGTATATTAATCAGGTAATATGTTTATAATACCTATTTAAGTTCATGGGTTGAAAGTTGGAAGCGAAAACAAACATTATAGTCAAAATATGACCTATAAATATCAAACAAGCCTTAAATGTGCATAATTTGACCAAAGTAGATGAGAATGAGTTGTAGCAACCTAATATTTGGTATATAAAACATTTAAAGGGTTTAGAGTACCTATTTAAGTTCATTGGTTAGAGTTGGGAGTGAAAACGACTATAATTGTCAAAGTATGACATATAACGATCAAACGAATCTTAAATGTGCATAACTTGACCAAAGTAGATGAGAGTGAGTCTAGAAATCTATTACTAACTATATTAAACATTTAAAGGGCTTAGAATACTTATTTAGGTTCATTAGTTAAGAGTTGGAACCAAAAACGACCATTTTAGTCAAAATATGACATATAACGATCAAACGAGCCTTAAATTGCACAAGTTGACCAAAGTAGAGGAGAATGAGTCTTACCATCCTAATATTAAGTATATTAAATATGTAAAAGGCTTAGAATACCTATTTGGCTTCATTTGTTGAGAGTTGTGAACGAAAATAACCATTATAGTCAAAATATGTTCTATAACGGTCAAACAAGCCTCAAATGTGCATAACTTGACCGAAGTGGATGATAATGAGCCTCAGCAACCTAATACTAAGTATATGAAACGTGTAAAGGATAGATAATACGTATTTAGGTTCATTAGTATAGAGTTGGGAGCGAAAACGACCATTATATAACGATCAAACGAGCCACAAATTGCATAACTTGACCAAAGTTGCTGTGAATGAGACTTATCATCCTAATATTAAGTATATTGAACATGTAAAGGGTTTAGAATACCTATTTAGCTTCATTAGTTGAAAGTTGGGAGCGAAAACAACAATTATTGTCAGAATATGACATATAACGATCAAACAAACCTTAAATTGCATAACTTGATCAAAGTAGATGAGAATGAGTCTTAGAATCCTAATATTAAGTATATTGAACATGTAAAGGGATTAGAATACCTATTTAGCTTCATTAGTTGAGAGTTGGGAGCGAAAACAACAATTATAGCCAAAATATGACATATAACGATCAAACGAGTCTCAAATTGCATAACTTGACCAAAGTAGATGAGAATTAGTCTTATCATCCTAATATTAAGTATATTTAATATGTAAAGGTCTTAGAATATGTATTTAGGTTCATTAATTGAGAGTTGGGAGCGAAAACATCAATTATAGTCAAAAAATGTCCTACACCGTTCAAGCGAGCGTTAAATGTGCATAAGTTGACCAAGTAGATGAGAATGAATCTTATCATCCTAACATTAAGTATATTAAACGTGAAGGGTTTGGAATACTTATTGGTTCATTAGTTAAGAGTTGGAACCGAAAATGGCCATTTAAGTGAAAATTGTTCATATAACTCAATTATTGTTTCAAAATAATGTTTATATTATATTTTACAATATTCATGTCTCTAACTAAACTATTTTGTGAAATACATTTTGAAGATGATATACATTTTGAAGATGATATGATATGATAGAGGATATGATACATTTTGAAGATGATATGATAGAGGAGAGAGAATGTTAGAGAGAGAAGCTGGAGGGAAATCCTCTCCAGCTACGAATACAACCACCGCCCTCACGGTAAACTCCATCTTGACAGGGACCGTGCACTCCGTCCAGCAGCACCAACAGGCACGACCAAGGGGTAAGAGTCAACCACCAACATCATCAACCACCTCTCAACCACAAATTTCCATATCTCCAACAGAAACTTGCACACACCCCCAAACAACACCATCCATAACAGCATCCCTTCCTAAGACCTTTAGAGATGTTGTTTCTCTGGAACACCCACTTACCATATCCTTAAAACAACCAACACAAATCAAGCCACATCTACCATACTCCACTACCCCACCACCACCAGTAACCCTAGGGGATGGTCTTTTCCTACCAGTTTCAAAGGAGAAGTATGAGGAAATCTCCAAGCCATGGCTAGAATCGGTGATTGTAAAAGTAATAGGTAAATCCTTTGAAAAACAATTTTTCCGTAAGGAAATGATGAGAATATGGAGCATACAGTCAAAATTGGAACTTCTGGCCCTAGGGAAGGGTTTCTATGCAGTTCACGGGCTACCAGCAGAAGCTAGAACTAATGTTCTGGCAAATGGTCCATGGTTCATTATGGGAGCCTTACTGTGGACAAGAAACTGGGAACCATCCTTTAGACCGTCCATGGCCAACGTTGATATGGGACCAGTTTGGGTCACCCTACCAGAACTCCCCCTAGAATTCTACTCAAAAGAGATGCTGGAAGGAATTGGCCAACAACTGGGCACACTGGTTAAGGTGGATACACATTCTCTTAGGGGGGAAGCGAGGAAATTTGCGAGCCTTTCCGTGCTTGTACCAAAGGGAACACCACCAGCAAAGGGAATTTGGCTAGGAAGAACTTACCAACCCTTTGTCTACTCAACAGGCATCTGGTTCTGTAAGGGGTGCAACGCTTTTGGTCATGCAAATGACTCGTGCTCAAAAAATAAAAATGGCAACACCCAAACACTTGAAAAAGGAGATGGAAACATGGCCAAACAGAGGTGGACCAGTGAAGAAGACGAAACGTGGAAAATGATTAGTAGAAAAGGAAGGAAGATTAATGATAATCACGTCATTAGTAGGGGGGGCCAACCCACTAACCAACAAAGGTGGACCCCAAAAAAGAACAAGGAGCCGTCGTTTGCAGAGGAAAAAACTTATGGGGAACCCTCAAAAATTTCGGAAAGTGTGAGAACAGAAGAAGTATTCATGGAACACACCTCCAATCCTTTCTCTGCTCTAGAATCCCTTGAATCTAGGGAAATAGAAGATGAAGAACTGATGGAAAACCCATCAACCACTATACCCTTGCCACGCAACACTCAAACTCCCTCGAAACCCAACACTCAATCTGTAACCACCCTACCCTTCATCCAAACCCTTACTCTACCCCGTAATGATGGCACGACACGAAACCCAAACACAAACCATAGCCAAATTCAAATAACTTCCACTTCCCAACACAATACCCAAAACACAAACATCAGCCATGACCCCTCCAAAAACACTATCACCTCAATCCTCAACAGGAAGCTCATCACCCACCACCTCGACAGCCTCACCTCCATTAATGGAGTCGGAACCACCCATTCTCCTCCGCTGCCCCTCGCTCCCCCTAAAACCAGAAATAAATCTCCACAACACCTTTTATCTCCTACCCTGCCAATTCCACCTTCAAGAACTATCACTACAAGAAGTCAAGCAAGTCATTCTCAACCCGAAATCAGCTCCACCAGAGGTGGACGATCTTTTAATGTTCACGGGGGGAGAAGACTTCGAAATAGCCCACCTACCTCAATTTTACAACGGAGATCACCTTCCGCCGGTGATGGCCGTCTTCATGGAATGGCTTCTCAAGAAAGAGGTCGGAGTCGAACAAGAGGAAATCGGTCTCCTTCACAACCTGGGCCCATGGCTCGACCCACCCCCCCTTCTCCCGAAGTGGAGACAATTTGCCCAACTCAGGGATGCTCCGATCAGAGTGAAAGCCACATGCAACACAAACGCTTTGATGGCCATGTCGATCCTTCCAAAGCTCAAACAACTCTCAATTCGGGTGAACTGGGAAGAGGTAAGAGGAAAAAGAAACCTAAGGGTCACAAAGATCCATGCAATTCCTCAGAGGGAGAAGTGGGTGTGCCCCATCACTCACGAAGAGATCGACCCGAGGTGGGAAGCCCAAACGGCAAAGGTCAAGGCGATGAAACGCCAACCTAAATTACCTTATAATATGTCAATTATCTACTGGAATGCTAGGGGAATTGGTAGGAAGTCTTTCAACCCCAACTTCCGTCATCTATTAACTACTCACAAGCCTGATATGGTTATCATCTCTGAAACGCAAGCTGGTCGAGCCAAAACCGCTAGGATAGTTGCTAACCTCCCCTTTGACTCTTGGTACTTGGTCGAGCCGGTGGGAGTTGCTGGAGGCATTCTTCTGATGTGGAGGACGGACCGCATCAACGTCCACATCATCAATGAGAATCGCCAAGGAGTACATGGC

mRNA sequence

ATGAAATTCCCTCCTTTACCAAATTTCATTCCCCGCCTTTTGTTTCTCGCAGCCTGCTTCCTTCTCGTTGGTTGCTGCCCTAACACCACTGTTTCTTTCCCAAGTCCCAACAACGTCCACCCCAAAAGCACCACCGCGTCATGGCTGCCATATCCCCCCATCCGCGTTTCTCCCCCCCTTGCGCGACTCTCCTGCGTTTCTGGAAGCCGTGTCGCCTACTACTGGAAGCTTCCCCCCGTGTTTAATTCTCCGACTCGCCCACTGTTGGAAACCGCCTCATCGCCTCTCCTGCGTGCACTTCCGCCGTCGCTGGCTCTCCTCCCGTTGGCTACCCTAGGGAAATATCATGATGCTGCACAGAAATACTTGCGTGTCTTGGCCTGCGATGAAAAGAATGTCAAGGCCTTATACCTTAGGGGCCAAGCATGCAAAGAATTAGGTCAATTAGAGGCACTTGAAGTTACCCCTGGCGATGACACAATTGCTGAAGTTTTAAGGGAGGCTAAAGAAAGTCTAGGAAAAGGAGATGTCACGCGAACTTCAACAGATCATTCCCAGCTCTTTGGGTTCATCAAGTGGTAGATTGAGTTTAAAGTCTCGTTCAAAATGTACCTGTTGATGATATTGATGTTGTTGGTGAGAAGAGCAACTCTTCTGGTTTATATTCCAATCCAGGAAGTTCATCCCAATCAAGTTTTCCTACATCAATGGGTGATATGCAAGAACCGATGAGAAAGAAGATGAAGATCTTGCCATGAGAACAGTGTTCTCTTTGATGTTGAAAATTATGAGTCCATATATGATGGCCAGCTTGAGTGAGCAATTAATTTGGCCTTAAGCTTCCAAAGAAGACGCTGCAAAAGCTCAAAAATCCATTATAACATTGTCACCTGAAGATCTGGATAAAATGATGATATACATTTTGAAGATGATATGATATGATAGAGGATATGATACATTTTGAAGATGATATGATAGAGGAGAGAGAATGTTAGAGAGAGAAGCTGGAGGGAAATCCTCTCCAGCTACGAATACAACCACCGCCCTCACGGTAAACTCCATCTTGACAGGGACCGTGCACTCCGTCCAGCAGCACCAACAGGCACGACCAAGGGGTAAGAGTCAACCACCAACATCATCAACCACCTCTCAACCACAAATTTCCATATCTCCAACAGAAACTTGCACACACCCCCAAACAACACCATCCATAACAGCATCCCTTCCTAAGACCTTTAGAGATGTTGTTTCTCTGGAACACCCACTTACCATATCCTTAAAACAACCAACACAAATCAAGCCACATCTACCATACTCCACTACCCCACCACCACCAGTAACCCTAGGGGATGGTCTTTTCCTACCAGTTTCAAAGGAGAAGTATGAGGAAATCTCCAAGCCATGGCTAGAATCGGTGATTGTAAAAGTAATAGGTAAATCCTTTGAAAAACAATTTTTCCGTAAGGAAATGATGAGAATATGGAGCATACAGTCAAAATTGGAACTTCTGGCCCTAGGGAAGGGTTTCTATGCAGTTCACGGGCTACCAGCAGAAGCTAGAACTAATGTTCTGGCAAATGGTCCATGGTTCATTATGGGAGCCTTACTGTGGACAAGAAACTGGGAACCATCCTTTAGACCGTCCATGGCCAACGTTGATATGGGACCAGTTTGGGTCACCCTACCAGAACTCCCCCTAGAATTCTACTCAAAAGAGATGCTGGAAGGAATTGGCCAACAACTGGGCACACTGGTTAAGGTGGATACACATTCTCTTAGGGGGGAAGCGAGGAAATTTGCGAGCCTTTCCGTGCTTGTACCAAAGGGAACACCACCAGCAAAGGGAATTTGGCTAGGAAGAACTTACCAACCCTTTGTCTACTCAACAGGCATCTGGTTCTGTAAGGGGTGCAACGCTTTTGGTCATGCAAATGACTCGTGCTCAAAAAATAAAAATGGCAACACCCAAACACTTGAAAAAGGAGATGGAAACATGGCCAAACAGAGGTGGACCAGTGAAGAAGACGAAACGTGGAAAATGATTAGTAGAAAAGGAAGGAAGATTAATGATAATCACGTCATTAGTAGGGGGGGCCAACCCACTAACCAACAAAGGTGGACCCCAAAAAAGAACAAGGAGCCGTCGTTTGCAGAGGAAAAAACTTATGGGGAACCCTCAAAAATTTCGGAAAGTGTGAGAACAGAAGAAGTATTCATGGAACACACCTCCAATCCTTTCTCTGCTCTAGAATCCCTTGAATCTAGGGAAATAGAAGATGAAGAACTGATGGAAAACCCATCAACCACTATACCCTTGCCACGCAACACTCAAACTCCCTCGAAACCCAACACTCAATCTGTAACCACCCTACCCTTCATCCAAACCCTTACTCTACCCCGTAATGATGGCACGACACGAAACCCAAACACAAACCATAGCCAAATTCAAATAACTTCCACTTCCCAACACAATACCCAAAACACAAACATCAGCCATGACCCCTCCAAAAACACTATCACCTCAATCCTCAACAGGAAGCTCATCACCCACCACCTCGACAGCCTCACCTCCATTAATGGAGTCGGAACCACCCATTCTCCTCCGCTGCCCCTCGCTCCCCCTAAAACCAGAAATAAATCTCCACAACACCTTTTATCTCCTACCCTGCCAATTCCACCTTCAAGAACTATCACTACAAGAAGTCAAGCAAGTCATTCTCAACCCGAAATCAGCTCCACCAGAGGTGGACGATCTTTTAATGTTCACGGGGGGAGAAGACTTCGAAATAGCCCACCTACCTCAATTTTACAACGGAGATCACCTTCCGCCGGTGATGGCCGTCTTCATGGAATGGCTTCTCAAGAAAGAGGTCGGAGTCGAACAAGAGGAAATCGGTCTCCTTCACAACCTGGGCCCATGGCTCGACCCACCCCCCCTTCTCCCGAAGTGGAGACAATTTGCCCAACTCAGGGATGCTCCGATCAGAGTGAAAGCCACATGCAACACAAACGCTTTGATGGCCATGTCGATCCTTCCAAAGCTCAAACAACTCTCAATTCGGGTGAACTGGGAAGAGGTAAGAGGAAAAAGAAACCTAAGGGTCACAAAGATCCATGCAATTCCTCAGAGGGAGAAGTGGGTGTGCCCCATCACTCACGAAGAGATCGACCCGAGGTGGGAAGCCCAAACGGCAAAGGTCAAGGCGATGAAACGCCAACCTAAATTACCTTATAATATGTCAATTATCTACTGGAATGCTAGGGGAATTGGTAGGAAGTCTTTCAACCCCAACTTCCGTCATCTATTAACTACTCACAAGCCTGATATGGTTATCATCTCTGAAACGCAAGCTGGTCGAGCCAAAACCGCTAGGATAGTTGCTAACCTCCCCTTTGACTCTTGGTACTTGGTCGAGCCGGTGGGAGTTGCTGGAGGCATTCTTCTGATGTGGAGGACGGACCGCATCAACGTCCACATCATCAATGAGAATCGCCAAGGAGTACATGGC

Coding sequence (CDS)

ATGAAATTCCCTCCTTTACCAAATTTCATTCCCCGCCTTTTGTTTCTCGCAGCCTGCTTCCTTCTCGTTGGTTGCTGCCCTAACACCACTGTTTCTTTCCCAAGTCCCAACAACGTCCACCCCAAAAGCACCACCGCGTCATGGCTGCCATATCCCCCCATCCGCGTTTCTCCCCCCCTTGCGCGACTCTCCTGCGTTTCTGGAAGCCGTGTCGCCTACTACTGGAAGCTTCCCCCCGTGTTTAATTCTCCGACTCGCCCACTGTTGGAAACCGCCTCATCGCCTCTCCTGCGTGCACTTCCGCCGTCGCTGGCTCTCCTCCCGTTGGCTACCCTAGGGAAATATCATGATGCTGCACAGAAATACTTGCGTGTCTTGGCCTGCGATGAAAAGAATGTCAAGGCCTTATACCTTAGGGGCCAAGCATGCAAAGAATTAGGTCAATTAGAGGCACTTGAAGTTACCCCTGGCGATGACACAATTGCTGAAGTTTTAAGGGAGGCTAAAGAAAGTCTAGGAAAAGGAGATGTCACGCGAACTTCAACAGATCATTCCCAGCTCTTTGGGTTCATCAAGTGGTAG

Protein sequence

MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPLARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLGKYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLEALEVTPGDDTIAEVLREAKESLGKGDVTRTSTDHSQLFGFIKW

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21873.1	Spo21873.1	mRNA

Homology

[Close]

BLAST of Spo21873.1 vs. NCBI nr
Match: gi|902209091|gb|KNA16094.1| (hypothetical protein SOVF_092310 [Spinacia oleracea])

HSP 1 Score: 233.8 bits (595), Expect = 2.500e-58
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1


		  
Query: 1   MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL 60
           MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL
Sbjct: 1   MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL 60

Query: 61  ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG 114
           ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG
Sbjct: 61  ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG 113

[Close]

BLAST of Spo21873.1 vs. NCBI nr
Match: gi|902238205|gb|KNA25078.1| (hypothetical protein SOVF_009830 [Spinacia oleracea])

HSP 1 Score: 98.6 bits (244), Expect = 1.300e-17
Identity = 55/77 (71.43%), Postives = 59/77 (76.62%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++HD  ++   VLA DEKNVKALY RGQA KELGQLE        ALEVTP DDTIAEVL
Sbjct: 161 QFHDCVKEGSEVLAYDEKNVKALYRRGQAYKELGQLENAVSDLAKALEVTPDDDTIAEVL 220

Query: 174 REAKESLGKGDVTRTST 183
           REAKESLGKG VTRTST
Sbjct: 221 REAKESLGKGGVTRTST 237

[Close]

BLAST of Spo21873.1 vs. NCBI nr
Match: gi|731348419|ref|XP_010685477.1| (PREDICTED: outer envelope protein 61 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 84.7 bits (208), Expect = 1.900e-13
Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++HD   +   VL  DEKNVKALY RGQA KELGQ+E        A EV+P DDTIAEVL
Sbjct: 161 QFHDCVNEGSEVLVYDEKNVKALYRRGQAYKELGQVENAVSDLRKAHEVSPDDDTIAEVL 220

Query: 174 REAKESLGKGDVTRTST 183
           REA+E LGK  +TRTST
Sbjct: 221 REAEECLGKDGITRTST 237

[Close]

BLAST of Spo21873.1 vs. NCBI nr
Match: gi|590586127|ref|XP_007015618.1| (Tetratricopeptide repeat-like superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 79.0 bits (193), Expect = 1.000e-11
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 1


		  
Query: 113 GKYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEV 172
           GK++DA+QKYL VL+ D KNVKALY RGQA KELGQLE        A EV+P D+TIA+V
Sbjct: 117 GKFNDASQKYLLVLSYDAKNVKALYRRGQAYKELGQLEDAVSDLSKAHEVSPDDETIADV 176

Query: 173 LREAKESLGK 175
           LR+A+E L +
Sbjct: 177 LRDAEERLAR 186

[Close]

BLAST of Spo21873.1 vs. NCBI nr
Match: gi|1009113436|ref|XP_015873144.1| (PREDICTED: outer envelope protein 61 [Ziziphus jujuba])

HSP 1 Score: 72.4 bits (176), Expect = 9.700e-10
Identity = 42/73 (57.53%), Postives = 50/73 (68.49%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           +Y +  ++   VL  D KNVKALY RGQA KELGQLE        ALEVTP D+TIA+VL
Sbjct: 159 QYDECIKEGSEVLEHDAKNVKALYRRGQAYKELGQLEDAVSDLSKALEVTPDDETIADVL 218

Query: 174 REAKESLGKGDVT 179
           R+AKE LGK  V+
Sbjct: 219 RDAKERLGKQGVS 231

[Close]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAR4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_092310 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.800e-58
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 1


		  
Query: 1   MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL 60
           MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL
Sbjct: 1   MKFPPLPNFIPRLLFLAACFLLVGCCPNTTVSFPSPNNVHPKSTTASWLPYPPIRVSPPL 60

Query: 61  ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG 114
           ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG
Sbjct: 61  ARLSCVSGSRVAYYWKLPPVFNSPTRPLLETASSPLLRALPPSLALLPLATLG 113

[Close]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S030_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009830 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.800e-18
Identity = 55/77 (71.43%), Postives = 59/77 (76.62%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++HD  ++   VLA DEKNVKALY RGQA KELGQLE        ALEVTP DDTIAEVL
Sbjct: 161 QFHDCVKEGSEVLAYDEKNVKALYRRGQAYKELGQLENAVSDLAKALEVTPDDDTIAEVL 220

Query: 174 REAKESLGKGDVTRTST 183
           REAKESLGKG VTRTST
Sbjct: 221 REAKESLGKGGVTRTST 237

[Close]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BTV4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171430 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.300e-13
Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++HD   +   VL  DEKNVKALY RGQA KELGQ+E        A EV+P DDTIAEVL
Sbjct: 161 QFHDCVNEGSEVLVYDEKNVKALYRRGQAYKELGQVENAVSDLRKAHEVSPDDDTIAEVL 220

Query: 174 REAKESLGKGDVTRTST 183
           REA+E LGK  +TRTST
Sbjct: 221 REAEECLGKDGITRTST 237

[Close]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Match: A0A061GVQ6_THECC (Tetratricopeptide repeat-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_041189 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.200e-12
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 1


		  
Query: 113 GKYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEV 172
           GK++DA+QKYL VL+ D KNVKALY RGQA KELGQLE        A EV+P D+TIA+V
Sbjct: 117 GKFNDASQKYLLVLSYDAKNVKALYRRGQAYKELGQLEDAVSDLSKAHEVSPDDETIADV 176

Query: 173 LREAKESLGK 175
           LR+A+E L +
Sbjct: 177 LRDAEERLAR 186

[Close]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Match: A0A0V0IPR0_SOLCH (Putative outer envelope protein 61, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.500e-9
Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 1


		  
Query: 113 GKYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEV 172
           G+Y D  ++   VL  D+KN+KALY RGQA KELGQLE        ALEV+P DDTIA+V
Sbjct: 8   GQYDDCIKEGSEVLTYDDKNIKALYRRGQAYKELGQLEDAVSDLSKALEVSPDDDTIADV 67

Query: 173 LREAKESLGK 175
           LR  +E L K
Sbjct: 68  LRGVQERLVK 77

[Close]

BLAST of Spo21873.1 vs. ExPASy Swiss-Prot
Match: OEP61_ARATH (Outer envelope protein 61 OS=Arabidopsis thaliana GN=OEP61 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.900e-6
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++ +  ++   VL  D +NVKALY RGQA ++LG  E        A EV+P D+TIA+VL
Sbjct: 161 QHEECIKEGSEVLGYDARNVKALYRRGQAYRDLGLFEDAVSDLSKAHEVSPEDETIADVL 220

Query: 174 REAKESL---GKGDVTR 180
           R+ KE L   G G  +R
Sbjct: 221 RDVKERLAVEGPGKASR 237

[Close]

BLAST of Spo21873.1 vs. TAIR (Arabidopsis)
Match: AT5G21990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.600e-7
Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 1


		  
Query: 114 KYHDAAQKYLRVLACDEKNVKALYLRGQACKELGQLE--------ALEVTPGDDTIAEVL 173
           ++ +  ++   VL  D +NVKALY RGQA ++LG  E        A EV+P D+TIA+VL
Sbjct: 161 QHEECIKEGSEVLGYDARNVKALYRRGQAYRDLGLFEDAVSDLSKAHEVSPEDETIADVL 220

Query: 174 REAKESL---GKGDVTR 180
           R+ KE L   G G  +R
Sbjct: 221 RDVKERLAVEGPGKASR 237

The following BLAST results are available for this feature:

BLAST of Spo21873.1 vs. NCBI nr
BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
BLAST of Spo21873.1 vs. ExPASy Swiss-Prot
BLAST of Spo21873.1 vs. TAIR (Arabidopsis)

BLAST of Spo21873.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902209091\|gb\|KNA16094.1\|	2.5e-58	100.	hypothetical protein SOVF_0923...	[more]
gi\|902238205\|gb\|KNA25078.1\|	1.3e-17	71.4	hypothetical protein SOVF_0098...	[more]
gi\|731348419\|ref\|XP_010685477.1\|	1.9e-13	61.0	PREDICTED: outer envelope prot...	[more]
gi\|590586127\|ref\|XP_007015618.1\|	1.0e-11	61.4	Tetratricopeptide repeat-like ...	[more]
gi\|1009113436\|ref\|XP_015873144.1\|	9.7e-10	57.5	PREDICTED: outer envelope prot...	[more]

BLAST of Spo21873.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RAR4_SPIOL	1.8e-58	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9S030_SPIOL	8.8e-18	71.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8BTV4_BETVU	1.3e-13	61.0	Uncharacterized protein OS=Bet...	[more]
A0A061GVQ6_THECC	7.2e-12	61.4	Tetratricopeptide repeat-like ...	[more]
A0A0V0IPR0_SOLCH	7.5e-9	55.7	Putative outer envelope protei...	[more]

BLAST of Spo21873.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
OEP61_ARATH	2.9e-6	42.8	Outer envelope protein 61 OS=A...	[more]

BLAST of Spo21873.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G21990.1	1.6e-7	42.8	Tetratricopeptide repeat (TPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 110..174 score: 4.
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 111..174 score: 2.4
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..25 score:

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009252	peptidoglycan biosynthetic process
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
biological_process	GO:0015031	protein transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0044446	intracellular organelle part
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0005829	cytosol
cellular_component	GO:0098588	bounding membrane of organelle
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0008250	oligosaccharyltransferase complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function	GO:0017056	structural constituent of nuclear pore
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003975	UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05618	0.67	Barchart \| Table
Spo15477	0.66	Barchart \| Table
Spo16835	0.66	Barchart \| Table
Spo24416	0.66	Barchart \| Table
Spo19231	0.66	Barchart \| Table
Spo23298	0.66	Barchart \| Table
Spo13913	0.65	Barchart \| Table