Spo21968 (gene) | SpinachBase

Overview


Name	Spo21968
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Jacalin-related lectin
Location	SpoScf_00297 : 318471 .. 319218 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAACAAGTCGCCCAGGTTCGAACTTACTTATTTTACGCGCTATTATTTCTCTTTCTTAATGTATATGTAGTACAATTTAATTTATTCATCCACTCCTAATAGTACGTCTAAATATATGCATAGTGTTATTAACTTTGCTTTTATCTCGACTCACAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAACCATCAAGGAAGTCATCATAAGGCATGGCTTCATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACAAAAAGATGTTTGGTGGCAGCAGTTGTCATGCCAAGGAGTCAAAGGTTAGTTGCTATGGCTGATCGAGCACATATAAATGTTCACATGTGATACTTAATTCCCTGTTTAGATTTTGATCCTCTAATGTTTTTCCCTTGCTGTTCATTTACTTAGATTGTACTCAAGTGTGGTGAAAAGATAACCCAAATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCATATGGACAAGGAAAGGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

mRNA sequence

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAACCATCAAGGAAGTCATCATAAGGCATGGCTTCATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACAAAAAGATGTTTGGTGGCAGCAGTTGTCATGCCAAGGAGTCAAAGATTGTACTCAAGTGTGGTGAAAAGATAACCCAAATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCATATGGACAAGGAAAGGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

Coding sequence (CDS)

ATGGCTCAACAAGTCGCCCAGAAGCATATGGTTGAACAATACGGACCTTATGGTTCTCAATGTCCCGAAAACTACAGCTTTAAACTTCAAGAAGGTGAAACCATCAAGGAAGTCATCATAAGGCATGGCTTCATTGTTGATGCTATTGGCTTCGTTGTAGCCAAGCCTTGTGGAGGTACCTACAAAAAGATGTTTGGTGGCAGCAGTTGTCATGCCAAGGAGTCAAAGATTGTACTCAAGTGTGGTGAAAAGATAACCCAAATTTCTGGCACCTACGGAAACTACAAGTACCAGAACAATCAATGCACCATTGCTACATTGAAGATCCACACCAACTTATGCCCATCTGGTCATGGACCATATGGACAAGGAAAGGGAGTCGATTGCCCACGAGCTTTTGCATCGCCATGCCCAATTGACGGCCCTGTTGTTGGAGTGTTCGGAAGGCACAACAACTACCTTGAGTCTGTTGGAATTTTCGTCCAGAAGAAGGTATAA

Protein sequence

MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGTYKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKKV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21968.1	Spo21968.1	mRNA

Homology

[Close]

BLAST of Spo21968.1 vs. NCBI nr
Match: gi|902174416|gb|KNA08411.1| (hypothetical protein SOVF_162610 [Spinacia oleracea])

HSP 1 Score: 353.6 bits (906), Expect = 1.900e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. NCBI nr
Match: gi|902146535|gb|KNA05074.1| (hypothetical protein SOVF_193740 [Spinacia oleracea])

HSP 1 Score: 342.4 bits (877), Expect = 4.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSG+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. NCBI nr
Match: gi|902181285|gb|KNA09703.1| (hypothetical protein SOVF_151170 [Spinacia oleracea])

HSP 1 Score: 342.4 bits (877), Expect = 4.300e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. NCBI nr
Match: gi|902170609|gb|KNA07866.1| (hypothetical protein SOVF_167930 isoform A [Spinacia oleracea])

HSP 1 Score: 339.7 bits (870), Expect = 2.800e-90
Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIIRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+IVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. NCBI nr
Match: gi|902239194|gb|KNA25495.1| (hypothetical protein SOVF_006320 [Spinacia oleracea])

HSP 1 Score: 333.6 bits (854), Expect = 2.000e-88
Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+R+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPB9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_162610 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.300e-94
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSP7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151170 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.000e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHGFIVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGFIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCS4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193740 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.000e-91
Identity = 157/164 (95.73%), Postives = 161/164 (98.17%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+RHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG SCHAKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSG+GP
Sbjct: 61  YTKMFGGISCHAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMR1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_167930 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 1.900e-90
Identity = 156/164 (95.12%), Postives = 160/164 (97.56%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MA QVAQKHMVEQYGPYGSQCPENYSFKLQEGE+IKEVIIRHG+IVDAIGFVVAKPCGGT
Sbjct: 1   MAHQVAQKHMVEQYGPYGSQCPENYSFKLQEGESIKEVIIRHGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+IVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP
Sbjct: 61  YTKMFGGNDCRAKESRIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S169_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006320 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.400e-88
Identity = 152/164 (92.68%), Postives = 159/164 (96.95%), Query Frame = 1


		  
Query: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGT 60
           MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVI+R+G+IVDAIGFVVAKPCGGT
Sbjct: 1   MAQQVAQKHMVEQYGPYGSQCPENYSFKLQEGETIKEVIVRYGYIVDAIGFVVAKPCGGT 60

Query: 61  YKKMFGGSSCHAKESKIVLKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGP 120
           Y KMFGG+ C AKES+I LKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCP+G+GP
Sbjct: 61  YTKMFGGNDCRAKESRIALKCGEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPTGYGP 120

Query: 121 YGQGKGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 165
           YGQG GVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK
Sbjct: 121 YGQGNGVDCPRAFASPCPIDGPVVGVFGRHNNYLESVGIFVQKK 164

[Close]

BLAST of Spo21968.1 vs. ExPASy Swiss-Prot
Match: LEC_PARPC (Mannose/glucose-specific lectin (Fragment) OS=Parkia platycephala PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.900e-12
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1


		  
Query: 15  GPYGSQCPENYSFKLQEGETIKEVIIRHGFIVDAIGFVVAKPCGGTYKKMFGGSSCHAKE 74
           GP+G    + +S+   EG  I ++II  G  + ++ F   K   G     FGG +     
Sbjct: 304 GPWGGSGGDPWSYTANEG--INQIIIYAGSNIKSVAF---KDTSGLDSATFGGVNPKDTG 363

Query: 75  SKIVLKCG---EKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPR 134
            K  +      E +T ISGTYG YK+++   TI +L   TNL  + +GP+G+        
Sbjct: 364 EKNTVSINWPSEYLTSISGTYGQYKFKDVFTTITSLSFTTNL--ATYGPFGKASAT---- 423

Query: 135 AFASPCPIDGPVVGVFGRHNNYLESVGIFVQ 163
           +F+ P   +  VVG  GR  +YL+++GIFV+
Sbjct: 424 SFSIPIH-NNMVVGFHGRAGDYLDAIGIFVK 442

[Close]

BLAST of Spo21968.1 vs. TAIR (Arabidopsis)
Match: AT1G19715.3 (Mannose-binding lectin superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.500e-6
Identity = 31/92 (33.70%), Postives = 43/92 (46.74%), Query Frame = 1


		  
Query: 73  KESKIVLKC-GEKITQISGTYGNYKYQNNQCTIATLKIHTNLCPSGHGPYGQGKGVDCPR 132
           K  KIV     E +T ++GTYG   Y      I +L   TN     HGPYG+ +G     
Sbjct: 299 KHDKIVFDYPSEVLTHVTGTYGPLMYMGPN-VIKSLTFRTNR--GKHGPYGEEQGPSFTH 358

Query: 133 AFASPCPIDGPVVGVFGRHNNYLESVGIFVQK 164
                   +G VVG  GR   +L+S+G+ V +
Sbjct: 359 QMD-----EGKVVGFLGREGLFLDSIGVHVME 382

The following BLAST results are available for this feature:

BLAST of Spo21968.1 vs. NCBI nr
BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
BLAST of Spo21968.1 vs. ExPASy Swiss-Prot
BLAST of Spo21968.1 vs. TAIR (Arabidopsis)

BLAST of Spo21968.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902174416\|gb\|KNA08411.1\|	1.9e-94	100.	hypothetical protein SOVF_1626...	[more]
gi\|902146535\|gb\|KNA05074.1\|	4.3e-91	95.7	hypothetical protein SOVF_1937...	[more]
gi\|902181285\|gb\|KNA09703.1\|	4.3e-91	95.7	hypothetical protein SOVF_1511...	[more]
gi\|902170609\|gb\|KNA07866.1\|	2.8e-90	95.1	hypothetical protein SOVF_1679...	[more]
gi\|902239194\|gb\|KNA25495.1\|	2.0e-88	92.6	hypothetical protein SOVF_0063...	[more]

BLAST of Spo21968.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPB9_SPIOL	1.3e-94	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QSP7_SPIOL	3.0e-91	95.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9QCS4_SPIOL	3.0e-91	95.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9QMR1_SPIOL	1.9e-90	95.1	Uncharacterized protein OS=Spi...	[more]
A0A0K9S169_SPIOL	1.4e-88	92.6	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo21968.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
LEC_PARPC	8.9e-12	32.4	Mannose/glucose-specific lecti...	[more]

BLAST of Spo21968.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G19715.3	4.5e-6	33.7	Mannose-binding lectin superfa...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001229	Jacalin-like lectin domain	GENE3D	2.100.10.30		coord: 10..162 score: 3.6
IPR001229	Jacalin-like lectin domain	PFAM	PF01419	Jacalin	coord: 36..161 score: 1.
IPR001229	Jacalin-like lectin domain	PROFILE	PS51752	JACALIN_LECTIN	coord: 11..163 score: 12
IPR001229	Jacalin-like lectin domain	unknown	SSF51101	Mannose-binding lectins	coord: 9..161 score: 7.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0016246	RNA interference
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0048825	cotyledon development
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0048571	long-day photoperiodism
biological_process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009611	response to wounding
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0000186	activation of MAPKK activity
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0006396	RNA processing
biological_process	GO:0045901	positive regulation of translational elongation
biological_process	GO:0045905	positive regulation of translational termination
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006452	translational frameshifting
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0006869	lipid transport
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0015696	ammonium transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0043090	amino acid import
biological_process	GO:0010351	lithium ion transport
biological_process	GO:0061025	membrane fusion
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0006862	nucleotide transport
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0000932	P-body
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0004365	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0008641	ubiquitin-like modifier activating enzyme activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0050661	NADP binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo21973	0.92	Barchart \| Table
Spo21969	0.86	Barchart \| Table
Spo21984	0.84	Barchart \| Table
Spo21982	0.83	Barchart \| Table
Spo21082	0.78	Barchart \| Table
Spo21985	0.78	Barchart \| Table
Spo09711	0.73	Barchart \| Table
Spo02991	0.72	Barchart \| Table
Spo23496	0.71	Barchart \| Table
Spo06873	0.70	Barchart \| Table
Spo24839	0.70	Barchart \| Table
Spo26272	0.70	Barchart \| Table
Spo21077	0.70	Barchart \| Table
Spo22139	0.68	Barchart \| Table
Spo12224	0.67	Barchart \| Table
Spo15994	0.67	Barchart \| Table
Spo24001	0.67	Barchart \| Table
Spo23966	0.67	Barchart \| Table
Spo19394	0.66	Barchart \| Table
Spo14124	0.66	Barchart \| Table
Spo04893	0.66	Barchart \| Table
Spo25306	0.66	Barchart \| Table
Spo21410	0.65	Barchart \| Table
Spo04409	0.65	Barchart \| Table