Spo22005 (gene) | SpinachBase

Overview


Name	Spo22005
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Mediator of RNA polymerase II transcription subunit 19
Location	SpoScf_03548 : 4347 .. 14680 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTGAAGGCAAGAAGTTTGGAAGAGGTAAATCATTAAATTGATCTCCCTTAGTCTATAATTTTTTCTTGCTTACATTTTTGTTTAGAAACAAAAGTGTTGATCCCCACAAAAAATAAAAAGAAGCAAAAGCGTAAATAAAAACAATACCTGCAGCCACAGTGGGGTTACCACTCTAGATATGATCTTTACTTTGCTGGATGATGAAATTCTCATGTCTTTGTAATTGAGGAGTCTCTGTCATGACGTGACAGCTTTTTTTCCGAGTAAATTCTCTAAACTTTGTGTGGGTTATGTAAATCAGAGTCACTTAGCCTGTGAATGCAACATAGCATCTTGTGCAAGGATGTCCGATGTCCCAAGAAACCCCCAGCATGTATAAATGTCTTGCAAACTATGATCTGCTATAAGCTTTCAAGATAATAAAAGTGTTGATATTTTTCTAGTGAACTGTGTGCATATAAGTAACAGGCTATTATATTGTAGACCTGAATCCACCGTCTACCAATGGGTGTTTTGTATATACTACGGGATCCGTAATGGTTGGGGGTTGCAACGCTGAAGTATATTTGAAGAGATAAATGTGGCATTTTTCTTATGATGCTGTGATTCTATCCTTTTGCTGTTTGTTACTTACTATTTCTGCTGAACACTGATGTAATTTTGCTTTTCTATGTTTTCTTCTCCGCTTTTCTTGCTACTATTTTTTTTCCAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCANCTTTTGGTGTTAAAGGCACTTAAAGAAGTGAAGTTTGGGGCCATTCTCTCCCCTGAGCACACGTTTTACTTGCTTATTGAAGGTGATTGATAACAGAATTTGTGAATTTTGCTTGTTTTTTTTTCCCCTAATGCATGATGTAAAATGTATCTTAATTTTATATAGGTCAAAAATATATAAAAGGAGATACAACATATTATCTTCAGTTTTTTTTTCTTCTGTAGTCAGAGTTGCATTGTTGATCTTCTTTGGAACATGTGAAATACAATAAATTGATACACATCACCTTTTGGAATGTTATGTGCTCCTTGGTACGGGAAGGGTTATGCACTCACTCTTATTGCCCCTCATGTCCACTGGCTGCCACATATTGTTTATACCTAGCATTTCTTTGTTCAGATTAGTGGATGGAAGAATGCATTTACATTGACATAAAGGAAAATTGCTCTTCATTTCTTGCCTTTACTTCTTTAGTCATGTGCGCCACTCTCGTAAAATGAATGATATTAGTGATCCAATTTTGCACATCTTGGATAGCCTTAGAAATTAATAGTAAACGTGGAACTCTGGATATCACTGGTAGGGAAAGGAGAAGGGAAGGGAGGAGGGGTAGGAAGAATTAGACTCTTCACCTTTTGTTTAACATAAGAAGTACTCTTACTTCCCTTCAAATCATTCTTATTTAGAAGTTTTGGTTTATTAAAGGGGAAAGAAATTGGATCCCCCAAATTCCCTTCCTGTCCCTTCCCCCAATTCCTATTCAGGCGAAGGAAAATGGATCCCAAATCGTCTTGTCCTTACTTCCCAGCTAACCAATCCCAGCACTCTGTACTTAATTGAACAACCACTTTGCTTGGTGAGTGGAAGCAATTAATTGGGGAATACAACCTGTAGTCATTTATGAAGCTTGACCCAATTAAGTAAATTACCAACGAAGATAGGTGCTCTTTTATTAAACTTTGAATTGACGTAACAAAATGCTAAAATGTTTTTTCTCTGTTTATATCTATTGGAGTTCAGACTAGATTGCAACCAGAAGAAAATTTTCTGGTATTTGTATTTGGAGTTCCTTAGCCGATGATTGTGCATCAGTTTAGAACATTTTATTGGTAGTACTTTATAAAAAGAATATTTGTGTAAATAACCTGAATTTTCATTTGGTGATTGTCTTAAGCATAGGAAAATAATGTACTGTCAGTTACATATCATATCGAGGATCCAAAGTTGACGCAAGTAAAAATTCCTCCTTTTCAGAAATGACCGCCCTATGCCCTGTAATGGAATGTTTTGAATTCTTTGTGTTAGTAAATACAGTATTACCACTACTATAAGCAATTAATGTACAACTCACCAAGTTTTATTACTATTTGTTCTCTTTAACCATTCTTAAGATGCGTGTTTTTTAAATTCAGACAACCATAAGAAATTAATGGAGGAAAAAAATCAACAATTTCGGCAATGGTGTGAAGTGCATGAAACTGTATTAGAGAAAAAGATCAGATTATTTGTGATCAGTTATGTGAAGTTTTTAATAATGTTGTGAGTTTTTTTAATGTACCTGACACTCTGACAGAATCTATTATAGTAGAATAAAGTGTGTTTCCTTGGTTTTGTAGAGTTGGCTAAGAATTCTCCCCCCGCCTGTCATTAGTTTTTCTCTGGTAACAATGTGTAAGTTAAAAATTCTCTGACATTGCATCTGGTTTTTATGTTTACAGTTTTGAGAGGATGGTCCACCGCACCATGAGATGTTGATTAATGGATTCTGAAGGCAAGAAGTTTGGAAGAGGTAAATCATTAAATTGGTCTCCATTAGTCTATAATTTTTTCCTGCTTACATTTTTGTTTAGAAACAAAAGTGTTGATCCCCACAAAAAATAAAAAGAAGCAAAAGCGTAAATAAAAACAATACCTGCAGCCACAGTGGGGTTACCACTCTAGATATGATCTTTACTTTGCTGGATGATGAAATTCTCATGTCTTTGTAATTGAGGAGTCTCTGTCATGACGTGACAACTTTTTTTCCGAGTAAATTCTCTAAAATTTCTGTGGGTTATGTAAATCAGAGTCACTTAGCCTGTGAATGCAACATAGCATCTTGTGCAGGGATGTCCGATGTCCCAAGAAACCCCCAGCATGTATAATGTCTTGTAAACTATGATCTGCTATAAGCTTTCAAGATAATAAAAGTGTTGATATTTTTCTAGTGAACTGTGTGCATATAAGTAACAGGCTATTATATTGTAGACCTGGATCCACCGTCTACCAATGGGTGTTTTGTATATACTACGGAATCCGTAATGGTTGGGGGTTGCAATGCTGAAGTATATTTGAAGAGATAAATGTGGCATTTTTCTTATGATGCTGTGATTCTATCCTTTTGCTGTTTGTTACTTACTATTTCTGCTGAATACTGATGTAATTTTGCTTTTCTATGTTTTCTTCTCCGCTTTTCTTGCTGCTATTTTTTTTCCAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCACTACCTTCACAATGTGGTTGGGGATACAGAAATTAGGAAGGGAGAAGGAATGCAGTTGGATCAGTTAATACAAAATCCGTCATATACGCTGGATGGAAATACACGGATACGGCCCTTTGATTTAGATGCTCTTAGAGAAGCTTTTAATCTGAGGGAAACAACCCCTGTTGACTTACCTTCCGTGAGTAATTTTTTCTCCTACCCTGATGATATGGCTAAATGTCACTCGGTTTCCAAACATTTTCAGAAAACATTGTTTTTCATGTCTCTTTAAACTGTTTAAAGTTTTTTTTCCTTCCACCATCTTCATCTCATGAACTTGGATATTAGTTCTGTTCGTTTGGAAACCTTGTTTTTCATGTCTCTTTAACTGTTTTAAGTTTTTTTTCCTCCCACCATCTTCATATCATGAACTTGGATTTTAGTTCTGTTCACATAAGGTCCCTTTCTGAAAAATGTAGAGAGTTGAGACCTGTTTTGCAAGTCGTATCACTTTTCAGTGGCAAATGTGACTTGGAAAATATTTTTTTCCTAGTGAAGGAACTTGTTTCTGGCTTCCTTTTTGGGTAATAAATAAATCTGGAGTTGAAACTATTCAAAGTCAACGTTTTTAATGTATTTAAGAGAAGTGTCTGTGGGAACTGGTTTGGCTTTGGAACTCGCAATGATTATTGATGGCTATAGGTTTCTCTTTCATTTTGTGGTGGTTCTCTGCTTTTTATTTTTTATTTTTTTATCTTGATAGACATAATGTAACAGTTAGATCTTTGTGCGCTCTTTTAATTATTGCATCTCATATACCTTTTAGGAAGAAAAGGGGGTCCCTACAATTGCAGGGAAATCTAAAAGCGAGTCAAAAGACAAGGATAGAAAGCACAAAAAGCACAAGGACAGGGACAAAGAGAAGGATAAAGAGCATAAGAAGCACAAACACCGCCATAAAGACCGAAGTAAAGATAAAGACAAGGACAAGAAGAAGGATTCTGGGGGTGAACATTCAAAGAAGCACCATGATAAGGTTCGTACATGTTTATCTATGCCGTTGGACCACCCTCTTGCTTTGGATCTAGCTACTAGCATTCTGAATTGGCAGTTGAAAAACAATTATTACTTGTCTGAGAATAGCCTCATCACTGTCTGTTGTTTTTAGTGCCTTCAGTAGGAGTTTCTGTCGAAATTTTGATGAGATTTATCTGGAAAGTTTTCATGCTGTGTTTAGTTTTATTTGGTTGTTGTTGTTTATATACTTTTGCTTTCCGCTTTTCTTCTACACCGACTACTGCAGTATTTCAAGAGTGTATATTTATAAGGTTCAGGTTTAACCATCAATCACTTCCTCTCTTAAACAATTCCAACCTTCACTTTGAAGGTCTACTGGAGTACAAGACCAAGTTTGACCATCATTGTTTTCATTTACTTATCAATTCATTTGAAGTTAATAGTTCAATATACACGGTGTAACAAATAGCAATGTTGTTAAGAAATGTATGGTCAAAGTTGATGAAGTATTACCTTGACAAATGGAGTGAAGTTTACCGGGAGTATTTTATTGGTTGTCTCCAAGGAAATAGAATTTTACTTCTTTTAGAGCGTCATTTTGGAACTTATGACTTATGCTTTCCGTTTGTGATTTGTAGTATTTCTACTCACTTTTAATATTGTTGCCTCCCTTGATTGCAGAAGAGGAAGCATGATGGTGATGAGGATGTAAACGACATTCATAGACATAAAAAGAGTAAGGTAATATTTTTTTGGTGTTAATTCAATTCCTGTTTACAGTGACCCGGGTTCTTTAGTTTGGGGTCTGGATCTGCAACTTGTTTATGTATAGAGCATCTGACAACAGGAATCCCTGTTAATGTGCTTTTTATGTTTGTGTATTGAGCCTATTTCTTTTTGACTGAATTGTCTCAGCATAAGAGCTCAAAAATAGATGAGATTGGTGCAATAAAGGTTGCTGGGTGATACGTTGCTGATAGTTGTGTTGATTTATTGTCTCAATGTTGGGAATTTCAAAGAGTTGATTACTTCCACGCAGTCATTCGAGGTATTTTCTTGTATTCTACTCATGTAATTTATGTATGCTATATGTTCAGTGGTATGTTTTTAAGTTTTCTGGAAGCATTTTCTGAAACGTTTTTGCCGAGTGTTTGTACTACTACTGAATTCTGGTGTAATTTTCAAGTAATTCACCATTATTGCAGGCCTTGCTGCCTGTTATGGTATTTTTACTGAGTTCAAATTTTGTGTATGCCTTTTAACTTAATGTCTTTGTAATAATACCTTCACGTTCTATTAAGAAAGAGGAGAGGGAAGGCGGGGGGGGCTATTCTTAGCGAATAGAAAGCCCTTTCATCAAGGGAAGCAAATGGGTTTATCAGTAATCTGTGAGGTAATGGACATGTGGGGTAAAGACCCTGATGTAGATTGAGTAGATAGATCAGAAGCAGTTCAACAGTACCCCAAACCCCATCTTACCCCCAACAACAACAACAAAGCCTTAGTCCCAAAATGATTTGGGGTCGGCTAACATGAATCGTCGTAGGAGATCGTCATAGTCACCAATCAAACCAGAAAGGAGCAGGAAGTAAAAAGAAAAAAAACAAGGAAGAGAAAGTGGAATTAATGAAAGTAAGATAAGAGAAAAAATAAAAATAAAAAGCTGGTGTACAGTCAATGAAGCAGCAATTTTGAGGTTAGTAGAAAATAAGGCTCCAACCCCGATGTAGAGATTGCCACCCTTTTCTAGACTCTGAATCTGGATAGTGTTACTTCTTATATTGTCAGGTTCGCCTGTGTCAAATTGATTACCATGACTTTGGAACCATTAAAATAGATCCTGTTCTATGAAGAAGGTTTGGGCCAACACTTTGAAGTTGTGCCGTGCAATGCTGACAAAGAAAGGACTTGAACTTCTAGGATGAGGGACCCTACCATAATTTTCGCCTCTTAGGACGGACTTTTAATAGAGATTGAAGCTCTATCGCCTCAATGATAGTTGACTTGGGACTGTCTACATATAAATGAAATACTTATGTCCACCAAAGCATCACATTATTATTTTAAGGTGGAAATAATGTTATGCTATTACTGCCAAGTGCCAAGCAAATTGGAGAGGGTGATTAATAGTGGCTCTGTACAACAAAGAAAATATTTTGAGTGATGCTAGATCTCTTCGTTCTAGCCGATTTTTTTTGTCTGTTGTCTCCAATTTTTTTCACATTATAAGACTCGGGCTTCCTCGCTCAGGATTTATGTTTTCAGGCAAATTGGGTTATAGGCGGATCAAGTGCTTAATTGCCCATGACATTGGCTCTTTCTATTATGGATAATAGTCGTGCTTACTTGCTTGCTTAAGGGCATGCTGCTTTCTTGTTCTCGTCCCTCATTCAGTATTATATTTTACTGATTGAGCAAAACAAAAGGAAACAAAACACAAAAGCAAGTGGGGTCATGGTTCCACGCAACCACTGTCACTGTTTCCATTTCAAGGTTTCTATGAACCGTAAGTAGCTGTAATGATATCAGGGACAAAGATCCAAACGGATCAATCTTGTTGACAGCGTTGTGAGTTTCTGATTTGTGAGGATGGTTTTCTCTTGTTACTTGGAGGTTACAACTGTTATGAGGATGCATTTTGGCAATAATACTTGCATAAATTACATTAACTAAAAACTTAAATTTCCACCAGCTCCGCCTATCAAATGGTTACTTGAGGGAAAACCTCCATCAGGGGCTTCTGCTTTACTTTATAAATAAGGATTGCAGTTCTTAATAATGCTGTTTTTGTGGGTGTAAAAGTTGGTCATGATCATCTTACACTACCCAAAATTCAGGTGACCCTATGGAGTTTGAGGAAATCTTTTTCCTTTTTGATGGTATATGTTTGTCAAGGTATTGGATCAGATGCATGGTATTGGTTGATATATGTGCCATTAGAAATATGATTTGCGTGATTGCCTTTCCCAAAAGTAATGGGCTTTAGCTCAATGGTCAGCATATACCTTATATTGGGAACTGTAGATATTGGCTTGTGGTACTTATAACACATACTTTATTCGATAAGCCTTTTCTCTTTGAAGCCATGAAAAGTGGGAGCTGGTTTTTGCTGGCTTTGGGTGCTGGTGAACTGGTAATCACCTGGAATCTTGTTATAAACATCCAGGATCGTTTAGATATTGGTTTCTGGTCCAACAGAATATGTCTGTGGGTGTTTAAAAATATAGTGACAATGTATCTTATAATGTCAACTTTGTTTTTTCCATTTAGCTTCTGCGCTGGAAATCGAGTCCTCCATATGATATGTTTTTTTGGTAAATAATAAAGAATTATATTAGAAAGACTGGAAGACACTTAGGGGGTGTTTCCCGTCCTTTTTCTTGCACTCTATTCCCCTCCTCCCCCTATAAGGAGGGCTAATGAAGTATGTTTCTTAAGGGGAAGCTAAGATGCTTGCATTGTGCACCCTTTTATGGGACCTTTCACATTTAGGTAAATGGAAGCTAATATACTTGCATTTGTCCTAGAGTACTTGCCTGCGGGTGTTTCCAAGTAAACTGGTAAAATATCAGTTTTTCAGTTCTCCACTAAATGGGCACATTGATTCTTTTCACTGGGAAACAGGAAACTAGATAAAGTGCCTTAAAAGGAGTGCAGTGATTCCTTTGAAATTCCTTTGTCATGGATTTTCTTGGAGAGTTAGTCCCAACAGATGTTGACCATAATATTATCGAAATGCTTCACTGTTGCGCTTTTACAGTCAAGTGTCCACATACAATGTAGTTTCTTCTCTATGGAACTTCCCATCACCTACTATATCGTCTCTTTGCAGCTCTTCATTTGTTGGTAAAGTTGCTTTACTAGCCGTCCACAAAAACCAGATAAGTCGCTGAGGTATAGAAAGTGCTCCTACCCTTATCCTCCATCTTCTCACCTTCCTTGAACTTAAATGGGTATATAGTATGTTGATCTAATAGTTAATATCAATCCTTCTTGTAATGTAGTTCCTCACGAGTTTGCAACTCCTTTCTGGCCATTAGTTTTTGCCGCATATTGTTTGAGTTGTAACATAAGCTTGCTTTACGCTTTTGTTTGGTACAAACAATGTTAATAAAGGAATGTATTAGAAAGGAAGAGAAGGGAAAGAAAATAAACTTTATTTTCAAGTGTTTGGTTTAATGGAAGGAGGTAAAGGAAGAAAGGAGCTTTATTTGACAACTTTCTATTCTCATTCCTCCCTAATTCTTCCAGTTGGGTGGAAAGGAAAGTGAATTTTATGAACTTTGCCTCACTTTTTCCCAACAATTCCCATTACTTCTGGGAACCAAACATGGAAACCTTGTTAAAGTCTTTTCCTTTCCAGCAAAATCCCATGTACCAAAAAGGGTCTTGGTAAAATTCTCTTTCTGAAGTTACCTTGAGCCCAAGCTGACTGTTCCCTATCGGCCAATCCTGTTGTCCCGTCCAAAAGTTGCTAAACGTCGATCTATTCTTACCACATACTTGTGTTTAGCTAGAAGCATGGCTTGCATTGGTGTTGCTTGTATAATTGCCTTCATGCACTTCGTTTGCCGCGGCAGACAAAATTCTTTCTTTCCGCCCATCAGTTTCTTCCAAATCCTCCCGTCAAAGATTTAATAACACTTTTGAGCACCATTGCAAGTAAACCAAGGTCTTCCCATGTGTATCTACATCACATACATCAATATTGCCACGGATCAGTTTCAGATGGTCAATGCAAGTTAACAGTTCTTGGAAGGGGACACTGGGGATTTGCTGTTAGGGAAGTATATTCAGCATTTCCCACTTCTCTCAGTAGATATGAGACGCAAAAACAAAAAAAACAAAATAAAAGAAGGAAAGAGAAGACGCTTTTATTATGGCCTTGAGTAACGACTGTGTTGGACAATTTATTGACTCTTGTACACTACTTTGGTAGTGAGTTTTCTTCACAACTCGAAATAGAACATTTGATTGTTGGAATGATGATGTGCATTTAAAGCTTTCTCTATGACTACTATCTTGCGTGATTTTCTTTGTCATTTACTTCTTATTTCTTTGCGTGGCCTTTTGAATATGGCCTTGTGTCTCTGCATGGTGTTCTTCCTTATTTAACTTACTTCCTTCCACCTGGTTCATACACCCACTTCTTTGACATTAGAATTTATGGTGCTACTGATAAACCTAACTTTATGCTCTAGTTCTGCTACATCAACTTGAATTGCCTTCTGTTGTATTTTCGGTACATGGCCGGGCATCTATGAAAACTGAGAAATATCTCTGTATTTTTTGCATGTAATGGTATGATTACGGTGCGTGCAAAATTTGATACCTCCTCTTATTATTGAACTGCAGAATACTTCATAAGTTGAGAATTGTGTGGAAGGAGAACTCTTTGTGGCAGAATGTATTGATCGGAGGTACAGATTGCTGGTGGTGAAAATTTTAATGTATCATCTACAGGTCCCTTAATATAATTGCTAGTATACCTCTATCAAATTCTGATCATTTTTGTTTTCAGTTTATATGGCGCATTGGAAATTCCCAACTTCTTGTCCATTATGATAACAAACATTTCTTCTTTCTTGAGGTCCAAATTTGAGCACTCTTACCAATCTGAGTAACTGAGTTAGAAATTACAGCTGGGTTTTAGATTAGAAGAAGGGGTTAGGATTGGTTGAAAGGTGCTAAATGTATTCCTTGTTTTTTTTACTTATTTCTACTTCTAGGGAATGTCGCTTCGTGTCATTTTTTTTGTTATTGTTAAATTGTCCAAACATTTAGGTAGATTGTAAGGGCAGTTTTGCGTGTATCCTAACTAATTTCTTTAGTTTATTAATGGTGAAATATTCTTTGTAAATTATATCCAAATGGGAGAACGGTTTACTGCCTTGTGTAGGTGACTGATGAGCGATACCTAT

mRNA sequence

ATGGATTCTGAAGGCAAGAAGTTTGGAAGAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCANCTTTTGGTGTTAAAGGCACTTAAAGAAGTGAAGTTTGGGGCCATTCTCTCCCCTGAGCACACGTTTTACTTGCTTATTGAAGGCAAGAAGTTTGGAAGAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCACTACCTTCACAATGTGGTTGGGGATACAGAAATTAGGAAGGGAGAAGGAATGCAGTTGGATCAGTTAATACAAAATCCGTCATATACGCTGGATGGAAATACACGGATACGGCCCTTTGATTTAGATGCTCTTAGAGAAGCTTTTAATCTGAGGGAAACAACCCCTGTTGACTTACCTTCCGAAGAAAAGGGGGTCCCTACAATTGCAGGGAAATCTAAAAGCGAGTCAAAAGACAAGGATAGAAAGCACAAAAAGCACAAGGACAGGGACAAAGAGAAGGATAAAGAGCATAAGAAGCACAAACACCGCCATAAAGACCGAAGTAAAGATAAAGACAAGGACAAGAAGAAGGATTCTGGGGGTGAACATTCAAAGAAGCACCATGATAAGAAGAGGAAGCATGATGGTGATGAGGATGTAAACGACATTCATAGACATAAAAAGAGTAAGCATAAGAGCTCAAAAATAGATGAGATTGGTGCAATAAAGTCATTCGAGAATACTTCATAAGTTGAGAATTGTGTGGAAGGAGAACTCTTTGTGGCAGAATGTATTGATCGGAGGTGACTGATGAGCGATACCTAT

Coding sequence (CDS)

ATGGATTCTGAAGGCAAGAAGTTTGGAAGAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCANCTTTTGGTGTTAAAGGCACTTAAAGAAGTGAAGTTTGGGGCCATTCTCTCCCCTGAGCACACGTTTTACTTGCTTATTGAAGGCAAGAAGTTTGGAAGAGGTCCGAGAGAGCTTACGGGTGCTGTTGATTTGATTACTCATTACAAGTTGTTACCACATCACGAGTTTTTCTGCAAAAAGTCACTTCCCGTATCAATTGCAGATACCCACTACCTTCACAATGTGGTTGGGGATACAGAAATTAGGAAGGGAGAAGGAATGCAGTTGGATCAGTTAATACAAAATCCGTCATATACGCTGGATGGAAATACACGGATACGGCCCTTTGATTTAGATGCTCTTAGAGAAGCTTTTAATCTGAGGGAAACAACCCCTGTTGACTTACCTTCCGAAGAAAAGGGGGTCCCTACAATTGCAGGGAAATCTAAAAGCGAGTCAAAAGACAAGGATAGAAAGCACAAAAAGCACAAGGACAGGGACAAAGAGAAGGATAAAGAGCATAAGAAGCACAAACACCGCCATAAAGACCGAAGTAAAGATAAAGACAAGGACAAGAAGAAGGATTCTGGGGGTGAACATTCAAAGAAGCACCATGATAAGAAGAGGAAGCATGATGGTGATGAGGATGTAAACGACATTCATAGACATAAAAAGAGTAAGCATAAGAGCTCAAAAATAGATGAGATTGGTGCAATAAAGTCATTCGAGAATACTTCATAA

Protein sequence

MDSEGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTXLLVLKALKEVKFGAILSPEHTFYLLIEGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEGMQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSESKDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIKSFENTS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22005.1	Spo22005.1	mRNA

Homology

[Close]

BLAST of Spo22005.1 vs. NCBI nr
Match: gi|902231010|gb|KNA22080.1| (hypothetical protein SOVF_037250 [Spinacia oleracea])

HSP 1 Score: 394.8 bits (1013), Expect = 1.300e-106
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES
Sbjct: 64  MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG 253
           KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG
Sbjct: 124 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG 183

Query: 254 DEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           DEDVNDIHRHKKSKHKSSKIDEIGAIK
Sbjct: 184 DEDVNDIHRHKKSKHKSSKIDEIGAIK 210

[Close]

BLAST of Spo22005.1 vs. NCBI nr
Match: gi|731335996|ref|XP_010679019.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.5 bits (929), Expect = 7.000e-97
Identity = 191/215 (88.84%), Postives = 202/215 (93.95%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFGRGPRELTGAVDLI+HYKLLPHHEFFCKKSLPVS+ADTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGRGPRELTGAVDLISHYKLLPHHEFFCKKSLPVSVADTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQNPSY+ DGNTRIRPFDLD LR+AF+LRETTPV+LPS EKG+PTIAGKSKSES
Sbjct: 64  MQLDQLIQNPSYSQDGNTRIRPFDLDVLRQAFHLRETTPVELPSVEKGMPTIAGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKK--------DSGGEHSKKHH 253
           KDK+RKHKKHKDRDKEKD+EHKKHKHRHKDRSKDKDKDK+K        DSGGEHSKKHH
Sbjct: 124 KDKERKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKEKKKDKSGHQDSGGEHSKKHH 183

Query: 254 DKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           DKKRKHDGDEDVNDIHRHKKSKH  SKIDE+GAIK
Sbjct: 184 DKKRKHDGDEDVNDIHRHKKSKHNRSKIDEMGAIK 218

[Close]

BLAST of Spo22005.1 vs. NCBI nr
Match: gi|731335988|ref|XP_010679015.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 350.9 bits (899), Expect = 2.100e-93
Identity = 191/234 (81.62%), Postives = 202/234 (86.32%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFGRGPRELTGAVDLI+HYKLLPHHEFFCKKSLPVS+ADTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGRGPRELTGAVDLISHYKLLPHHEFFCKKSLPVSVADTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQNPSY+ DGNTRIRPFDLD LR+AF+LRETTPV+LPS EKG+PTIAGKSKSES
Sbjct: 64  MQLDQLIQNPSYSQDGNTRIRPFDLDVLRQAFHLRETTPVELPSVEKGMPTIAGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKK--------DSGGEHSKKHH 253
           KDK+RKHKKHKDRDKEKD+EHKKHKHRHKDRSKDKDKDK+K        DSGGEHSKKHH
Sbjct: 124 KDKERKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKEKKKDKSGHQDSGGEHSKKHH 183

Query: 254 DK-------------------KRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           DK                   KRKHDGDEDVNDIHRHKKSKH  SKIDE+GAIK
Sbjct: 184 DKLMPYMGIGEFQSKSQSGVEKRKHDGDEDVNDIHRHKKSKHNRSKIDEMGAIK 237

[Close]

BLAST of Spo22005.1 vs. NCBI nr
Match: gi|802546307|ref|XP_012084336.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Jatropha curcas])

HSP 1 Score: 337.4 bits (864), Expect = 2.400e-89
Identity = 180/215 (83.72%), Postives = 196/215 (91.16%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFG GPRELTGAVDLI+HYKLLPHHEFFCK+SLP+SI+DTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGGGPRELTGAVDLISHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQN SY+ + N RI+PFDLD LREAF  +ETTPVDLPS EKG PTIA KSKSES
Sbjct: 64  MQLDQLIQNTSYSRESNIRIQPFDLDVLREAFQFKETTPVDLPSAEKGTPTIAVKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRH--KDRSKDKDKDKKK------DSGGEHSKKHH 253
           KDK+RKHKKHKD+DKEKDKEHKKHKHRH  KDRSKDKDK+KKK      DSGG+HSKKHH
Sbjct: 124 KDKERKHKKHKDKDKEKDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGHHDSGGDHSKKHH 183

Query: 254 DKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           +KKRKHDGDED+ND+H+HKKSKHKSSKIDEIGAIK
Sbjct: 184 EKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIK 218

[Close]

BLAST of Spo22005.1 vs. NCBI nr
Match: gi|700189481|gb|KGN44714.1| (hypothetical protein Csa_7G374560 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 5.900e-88
Identity = 177/214 (82.71%), Postives = 193/214 (90.19%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E KKFGRGPRELTGAVDLI+HYKLLPHH+FFCKKSLP+SI+DTHYLHNVVGDTEIRKGEG
Sbjct: 4   EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQL+QLIQN SY  + N RI+PFD D L EAF LRET PVDLPS EKGVPTI GKSKSES
Sbjct: 64  MQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKK------DSGGEHSKKHHDK 253
           KDKDRKHKKHKDRDKEKD+EHKKHKHRHKDRSKDKDKDKKK      DSG +HSKKHH+K
Sbjct: 124 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEK 183

Query: 254 KRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIKS 282
           KRKHDG++D+NDIHRHKKSKHK+SKI+E+G IKS
Sbjct: 184 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKS 217

[Close]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRB6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_037250 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 8.800e-107
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES
Sbjct: 64  MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG 253
           KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG
Sbjct: 124 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHDG 183

Query: 254 DEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           DEDVNDIHRHKKSKHKSSKIDEIGAIK
Sbjct: 184 DEDVNDIHRHKKSKHKSSKIDEIGAIK 210

[Close]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Match: A0A067LLG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15059 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.700e-89
Identity = 180/215 (83.72%), Postives = 196/215 (91.16%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           EGKKFG GPRELTGAVDLI+HYKLLPHHEFFCK+SLP+SI+DTHYLHNVVGDTEIRKGEG
Sbjct: 4   EGKKFGGGPRELTGAVDLISHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQN SY+ + N RI+PFDLD LREAF  +ETTPVDLPS EKG PTIA KSKSES
Sbjct: 64  MQLDQLIQNTSYSRESNIRIQPFDLDVLREAFQFKETTPVDLPSAEKGTPTIAVKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRH--KDRSKDKDKDKKK------DSGGEHSKKHH 253
           KDK+RKHKKHKD+DKEKDKEHKKHKHRH  KDRSKDKDK+KKK      DSGG+HSKKHH
Sbjct: 124 KDKERKHKKHKDKDKEKDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGHHDSGGDHSKKHH 183

Query: 254 DKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           +KKRKHDGDED+ND+H+HKKSKHKSSKIDEIGAIK
Sbjct: 184 EKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIK 218

[Close]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K716_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374560 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.100e-88
Identity = 177/214 (82.71%), Postives = 193/214 (90.19%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E KKFGRGPRELTGAVDLI+HYKLLPHH+FFCKKSLP+SI+DTHYLHNVVGDTEIRKGEG
Sbjct: 4   EDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQL+QLIQN SY  + N RI+PFD D L EAF LRET PVDLPS EKGVPTI GKSKSES
Sbjct: 64  MQLNQLIQNTSYPRETNARIQPFDQDILIEAFQLRETGPVDLPSAEKGVPTIPGKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKK------DSGGEHSKKHHDK 253
           KDKDRKHKKHKDRDKEKD+EHKKHKHRHKDRSKDKDKDKKK      DSG +HSKKHH+K
Sbjct: 124 KDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSGHQDSGADHSKKHHEK 183

Query: 254 KRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIKS 282
           KRKHDG++D+NDIHRHKKSKHK+SKI+E+G IKS
Sbjct: 184 KRKHDGEDDINDIHRHKKSKHKASKIEEMGVIKS 217

[Close]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Match: B9T2I7_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0101820 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.600e-87
Identity = 174/215 (80.93%), Postives = 195/215 (90.70%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E KKFG GPRELTGAVDLI+H+KL+PHHEFFCK+SLP+SI+DTHYLHNVVGD+EIRKG+G
Sbjct: 4   ESKKFGSGPRELTGAVDLISHFKLVPHHEFFCKRSLPLSISDTHYLHNVVGDSEIRKGDG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQN SY+ D N RI+PFDLD LREAF L+ETTP+DLP  EKG PTIA KSKSES
Sbjct: 64  MQLDQLIQNTSYSRDSNARIQPFDLDVLREAFQLKETTPIDLPPAEKGTPTIAAKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRH--KDRSKDKDKDKKK------DSGGEHSKKHH 253
           KDK+RKHKKHKD+DK++DKEHKKHKHRH  KDRSKDKDK+KKK      DSGG+HSKKHH
Sbjct: 124 KDKERKHKKHKDKDKKEDKEHKKHKHRHKDKDRSKDKDKEKKKDRSGHHDSGGDHSKKHH 183

Query: 254 DKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           DKKRKHDGDED+ND+H+HKKSKHKSSKIDEIGAIK
Sbjct: 184 DKKRKHDGDEDLNDVHKHKKSKHKSSKIDEIGAIK 218

[Close]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Match: A0A103YLX8_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010049 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.700e-87
Identity = 174/213 (81.69%), Postives = 195/213 (91.55%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E KKFG+GPRELTGAVDLI++YKLLPHHEFFCKKSLP+SI+DTHYLHNV GD+EIRKGEG
Sbjct: 4   ESKKFGKGPRELTGAVDLISYYKLLPHHEFFCKKSLPLSISDTHYLHNVPGDSEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLIQN S+  + N+RI+PFDLD LREAF LRET PVDLPS EKG+PTIAGKSKSE+
Sbjct: 64  MQLDQLIQNTSFPRETNSRIQPFDLDILREAFQLRETAPVDLPSSEKGIPTIAGKSKSEA 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKK------DSGGEHSKKHHDK 253
           KDK+RKHKKHKD+D++KDKEHKKHKHRHKDRSK+KDK+KKK      DSG E SKKHH+K
Sbjct: 124 KDKERKHKKHKDKDRDKDKEHKKHKHRHKDRSKEKDKEKKKDKSSHHDSGAEPSKKHHEK 183

Query: 254 KRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           KRKHDGDED+NDIHRHKKSKHKSSKIDE+GAIK
Sbjct: 184 KRKHDGDEDLNDIHRHKKSKHKSSKIDEMGAIK 216

[Close]

BLAST of Spo22005.1 vs. ExPASy Swiss-Prot
Match: MD19A_ARATH (Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana GN=MED19A PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 6.100e-77
Identity = 154/216 (71.30%), Postives = 182/216 (84.26%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E  KFG GPREL GA DLI+ +KL+ HHEFFCKKSLPVS++D+HYLHNVVGDTEIRKGEG
Sbjct: 4   ERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLI++ S + + N RI+PFD+D L+E+F L + TPV+LP  EKG PTI  KSKSES
Sbjct: 64  MQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKD---------SGGEHSKKH 253
           KD+DRKHKKHKDRDK+KD+EHKKHKH+HKDRSKDKDKDK +D           G+HSKKH
Sbjct: 124 KDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKH 183

Query: 254 HDKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           HDKKRKHDGDED+ND+ RHKK+KHKSSK+DE+GAI+
Sbjct: 184 HDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIR 218

[Close]

BLAST of Spo22005.1 vs. ExPASy Swiss-Prot
Match: MD19B_ARATH (Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis thaliana GN=MED19B PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.000e-69
Identity = 148/207 (71.50%), Postives = 170/207 (82.13%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E  KFG GPREL GA+DLIT YKLLPHHEFFCK+SLP S++D HYLHN+VGDTEIRKGEG
Sbjct: 4   ESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSY-TLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSE 193
           MQLDQLI N S  + D N RI+PF LD L+EAF L +T PV+LP  EKG PT   KSKSE
Sbjct: 64  MQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKSKSE 123

Query: 194 SKDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHD 253
           SKDKDRKH+KHKD+ KEKD+EHKKHKH+HKDR KDKDKDK +D   E S  HHDKKRK++
Sbjct: 124 SKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKKKEKS-GHHDKKRKNN 183

Query: 254 GDEDVNDIHRHKKSKHKSSKIDEIGAI 280
           G ED +D+ RHKKSKHKSSK+DE+GA+
Sbjct: 184 GTEDADDVQRHKKSKHKSSKLDEMGAM 207

[Close]

BLAST of Spo22005.1 vs. TAIR (Arabidopsis)
Match: AT5G12230.1 (MED19A)

HSP 1 Score: 288.9 bits (738), Expect = 3.500e-78
Identity = 154/216 (71.30%), Postives = 182/216 (84.26%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E  KFG GPREL GA DLI+ +KL+ HHEFFCKKSLPVS++D+HYLHNVVGDTEIRKGEG
Sbjct: 4   ERLKFG-GPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSYTLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSES 193
           MQLDQLI++ S + + N RI+PFD+D L+E+F L + TPV+LP  EKG PTI  KSKSES
Sbjct: 64  MQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSES 123

Query: 194 KDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKD---------SGGEHSKKH 253
           KD+DRKHKKHKDRDK+KD+EHKKHKH+HKDRSKDKDKDK +D           G+HSKKH
Sbjct: 124 KDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKH 183

Query: 254 HDKKRKHDGDEDVNDIHRHKKSKHKSSKIDEIGAIK 281
           HDKKRKHDGDED+ND+ RHKK+KHKSSK+DE+GAI+
Sbjct: 184 HDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIR 218

[Close]

BLAST of Spo22005.1 vs. TAIR (Arabidopsis)
Match: AT5G19480.1 (unknown protein)

HSP 1 Score: 261.9 bits (668), Expect = 4.500e-70
Identity = 148/207 (71.50%), Postives = 170/207 (82.13%), Query Frame = 1

		  
Query: 74  EGKKFGRGPRELTGAVDLITHYKLLPHHEFFCKKSLPVSIADTHYLHNVVGDTEIRKGEG 133
           E  KFG GPREL GA+DLIT YKLLPHHEFFCK+SLP S++D HYLHN+VGDTEIRKGEG
Sbjct: 4   ESVKFG-GPRELGGALDLITQYKLLPHHEFFCKRSLPESLSDAHYLHNLVGDTEIRKGEG 63

Query: 134 MQLDQLIQNPSY-TLDGNTRIRPFDLDALREAFNLRETTPVDLPSEEKGVPTIAGKSKSE 193
           MQLDQLI N S  + D N RI+PF LD L+EAF L +T PV+LP  EKG PT   KSKSE
Sbjct: 64  MQLDQLIPNASLSSRDTNARIQPFVLDELKEAFELNDTAPVELPPAEKGAPTTVSKSKSE 123

Query: 194 SKDKDRKHKKHKDRDKEKDKEHKKHKHRHKDRSKDKDKDKKKDSGGEHSKKHHDKKRKHD 253
           SKDKDRKH+KHKD+ KEKD+EHKKHKH+HKDR KDKDKDK +D   E S  HHDKKRK++
Sbjct: 124 SKDKDRKHRKHKDK-KEKDREHKKHKHKHKDRIKDKDKDKDRDKKKEKS-GHHDKKRKNN 183

Query: 254 GDEDVNDIHRHKKSKHKSSKIDEIGAI 280
           G ED +D+ RHKKSKHKSSK+DE+GA+
Sbjct: 184 GTEDADDVQRHKKSKHKSSKLDEMGAM 207

The following BLAST results are available for this feature:

BLAST of Spo22005.1 vs. NCBI nr
BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
BLAST of Spo22005.1 vs. ExPASy Swiss-Prot
BLAST of Spo22005.1 vs. TAIR (Arabidopsis)

BLAST of Spo22005.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902231010\|gb\|KNA22080.1\|	1.3e-106	100.	hypothetical protein SOVF_0372...	[more]
gi\|731335996\|ref\|XP_010679019.1\|	7.0e-97	88.8	PREDICTED: mediator of RNA pol...	[more]
gi\|731335988\|ref\|XP_010679015.1\|	2.1e-93	81.6	PREDICTED: mediator of RNA pol...	[more]
gi\|802546307\|ref\|XP_012084336.1\|	2.4e-89	83.7	PREDICTED: mediator of RNA pol...	[more]
gi\|700189481\|gb\|KGN44714.1\|	5.9e-88	82.7	hypothetical protein Csa_7G374...	[more]

BLAST of Spo22005.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9RRB6_SPIOL	8.8e-107	100.	Uncharacterized protein OS=Spi...	[more]
A0A067LLG0_JATCU	1.7e-89	83.7	Uncharacterized protein OS=Jat...	[more]
A0A0A0K716_CUCSA	4.1e-88	82.7	Uncharacterized protein OS=Cuc...	[more]
B9T2I7_RICCO	1.6e-87	80.9	RNA binding protein, putative ...	[more]
A0A103YLX8_CYNCS	2.7e-87	81.6	Uncharacterized protein OS=Cyn...	[more]

BLAST of Spo22005.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
MD19A_ARATH	6.1e-77	71.3	Mediator of RNA polymerase II ...	[more]
MD19B_ARATH	8.0e-69	71.5	Probable mediator of RNA polym...	[more]

BLAST of Spo22005.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT5G12230.1	3.5e-78	71.3	MED19A	[more]
AT5G19480.1	4.5e-70	71.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22536	LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN	coord: 69..281 score: 1.4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0016925	protein sumoylation
biological_process	GO:0006396	RNA processing
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0018108	peptidyl-tyrosine phosphorylation
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0015824	proline transport
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0006397	mRNA processing
biological_process	GO:0045332	phospholipid translocation
biological_process	GO:0006812	cation transport
biological_process	GO:0015917	aminophospholipid transport
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0009966	regulation of signal transduction
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0010118	stomatal movement
biological_process	GO:0006996	organelle organization
biological_process	GO:0006897	endocytosis
biological_process	GO:0043631	RNA polyadenylation
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0080090	regulation of primary metabolic process
biological_process	GO:0060255	regulation of macromolecule metabolic process
biological_process	GO:0031323	regulation of cellular metabolic process
biological_process	GO:0034654	nucleobase-containing compound biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0006260	DNA replication
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0009651	response to salt stress
biological_process	GO:0006096	glycolytic process
biological_process	GO:0043407	negative regulation of MAP kinase activity
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0034605	cellular response to heat
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0042221	response to chemical
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0000188	inactivation of MAPK activity
biological_process	GO:0045116	protein neddylation
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0006457	protein folding
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0042732	D-xylose metabolic process
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0034053	modulation by symbiont of host defense-related programmed cell death
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0007030	Golgi organization
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0046909	obsolete intermembrane transport
biological_process	GO:0006887	exocytosis
biological_process	GO:0034051	negative regulation of plant-type hypersensitive response
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0010193	response to ozone
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0009903	chloroplast avoidance movement
biological_process	GO:0010218	response to far red light
biological_process	GO:0010119	regulation of stomatal movement
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009638	phototropism
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0010362	negative regulation of anion channel activity by blue light
biological_process	GO:0009904	chloroplast accumulation movement
biological_process	GO:0009744	response to sucrose
biological_process	GO:0009785	blue light signaling pathway
biological_process	GO:0048440	carpel development
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0009697	salicylic acid biosynthetic process
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0046496	nicotinamide nucleotide metabolic process
biological_process	GO:0010114	response to red light
biological_process	GO:0006952	defense response
biological_process	GO:0009942	longitudinal axis specification
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006218	uridine catabolic process
biological_process	GO:0006152	purine nucleoside catabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0016570	histone modification
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009607	response to biotic stimulus
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0016049	cell growth
biological_process	GO:0010035	response to inorganic substance
biological_process	GO:0051179	localization
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0009056	catabolic process
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0009945	radial axis specification
biological_process	GO:0048508	embryonic meristem development
biological_process	GO:0015940	pantothenate biosynthetic process
biological_process	GO:0009908	flower development
biological_process	GO:0048364	root development
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0040029	regulation of gene expression, epigenetic
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0048366	leaf development
biological_process	GO:0016458	gene silencing
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0007155	cell adhesion
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0010033	response to organic substance
biological_process	GO:0009719	response to endogenous stimulus
biological_process	GO:0042128	nitrate assimilation
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006810	transport
biological_process	GO:0051604	protein maturation
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0010051	xylem and phloem pattern formation
biological_process	GO:0019530	taurine metabolic process
biological_process	GO:0048653	anther development
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0097503	sialylation
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0009846	pollen germination
biological_process	GO:0006950	response to stress
biological_process	GO:0005992	trehalose biosynthetic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0045859	regulation of protein kinase activity
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0048767	root hair elongation
biological_process	GO:0032880	regulation of protein localization
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0006027	glycosaminoglycan catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
biological_process	GO:0045017	glycerolipid biosynthetic process
biological_process	GO:0071108	protein K48-linked deubiquitination
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0070417	cellular response to cold
biological_process	GO:0071215	cellular response to abscisic acid stimulus
biological_process	GO:0008219	cell death
biological_process	GO:0006508	proteolysis
biological_process	GO:0070536	protein K63-linked deubiquitination
biological_process	GO:0016441	posttranscriptional gene silencing
biological_process	GO:0007623	circadian rhythm
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:0016556	mRNA modification
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0071329	cellular response to sucrose stimulus
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010271	regulation of chlorophyll catabolic process
biological_process	GO:0009863	salicylic acid mediated signaling pathway
biological_process	GO:0000303	response to superoxide
biological_process	GO:0006970	response to osmotic stress
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010029	regulation of seed germination
biological_process	GO:0048509	regulation of meristem development
biological_process	GO:0031537	regulation of anthocyanin metabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0016558	protein import into peroxisome matrix
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0018106	peptidyl-histidine phosphorylation
biological_process	GO:0034757	negative regulation of iron ion transport
biological_process	GO:0010150	leaf senescence
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0002213	defense response to insect
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0019915	lipid storage
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0007346	regulation of mitotic cell cycle
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0009117	nucleotide metabolic process
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0046339	diacylglycerol metabolic process
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:0006281	DNA repair
biological_process	GO:0006310	DNA recombination
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0051301	cell division
biological_process	GO:0046373	L-arabinose metabolic process
biological_process	GO:0050826	response to freezing
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0010048	vernalization response
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0016233	telomere capping
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0080117	secondary growth
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0010200	response to chitin
biological_process	GO:0044206	UMP salvage
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0009790	embryo development
biological_process	GO:0006364	rRNA processing
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0061025	membrane fusion
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0006479	protein methylation
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0044211	CTP salvage
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process	GO:0051013	microtubule severing
biological_process	GO:0015031	protein transport
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0007165	signal transduction
biological_process	GO:0000186	activation of MAPKK activity
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005956	protein kinase CK2 complex
cellular_component	GO:0009341	beta-galactosidase complex
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0010494	cytoplasmic stress granule
cellular_component	GO:0016020	membrane
cellular_component	GO:0009365	protein histidine kinase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0031461	cullin-RING ubiquitin ligase complex
cellular_component	GO:0008076	voltage-gated potassium channel complex
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0031519	PcG protein complex
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0045298	tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0008352	katanin complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0009898	cytoplasmic side of plasma membrane
cellular_component	GO:0009986	cell surface
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005768	endosome
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:0031981	nuclear lumen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000159	protein phosphatase type 2A complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0048046	apoplast
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0016597	amino acid binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0017111	nucleoside-triphosphatase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0009882	blue light photoreceptor activity
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0019781	NEDD8 activating enzyme activity
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0005057	obsolete signal transducer activity, downstream of receptor
molecular_function	GO:0005034	osmosensor activity
molecular_function	GO:0000155	phosphorelay sensor kinase activity
molecular_function	GO:0016881	acid-amino acid ligase activity
molecular_function	GO:0038023	signaling receptor activity
molecular_function	GO:0004715	non-membrane spanning protein tyrosine kinase activity
molecular_function	GO:0000156	phosphorelay response regulator activity
molecular_function	GO:0004534	5'-3' exoribonuclease activity
molecular_function	GO:0008897	holo-[acyl-carrier-protein] synthase activity
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0004000	adenosine deaminase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0072585	xanthosine nucleotidase activity
molecular_function	GO:0045437	uridine nucleosidase activity
molecular_function	GO:0047724	inosine nucleosidase activity
molecular_function	GO:0047622	adenosine nucleosidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0005249	voltage-gated potassium channel activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0004012	phospholipid-translocating ATPase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0009884	cytokinin receptor activity
molecular_function	GO:0009045	xylose isomerase activity
molecular_function	GO:0004849	uridine kinase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0004683	calmodulin-dependent protein kinase activity
molecular_function	GO:0046556	alpha-L-arabinofuranosidase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0009702	L-arabinokinase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0047800	cysteamine dioxygenase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004652	polynucleotide adenylyltransferase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004144	diacylglycerol O-acyltransferase activity
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004335	galactokinase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0016746	transferase activity, transferring acyl groups
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0033549	MAP kinase phosphatase activity
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0004034	aldose 1-epimerase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003689	DNA clamp loader activity
molecular_function	GO:0047453	ATP-dependent NAD(P)H-hydrate dehydratase activity
molecular_function	GO:0004046	aminoacylase activity
molecular_function	GO:0052855	ADP-dependent NAD(P)H-hydrate dehydratase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0000149	SNARE binding
molecular_function	GO:0019948	SUMO activating enzyme activity
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0008138	protein tyrosine/serine/threonine phosphatase activity
molecular_function	GO:0008373	sialyltransferase activity
molecular_function	GO:0043424	protein histidine kinase binding
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0005488	binding
molecular_function	GO:0004435	phosphatidylinositol phospholipase C activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0004805	trehalose-phosphatase activity
molecular_function	GO:0003825	alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0019888	protein phosphatase regulator activity
molecular_function	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity
molecular_function	GO:0019887	protein kinase regulator activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004709	MAP kinase kinase kinase activity
molecular_function	GO:0004871	obsolete signal transducer activity
molecular_function	GO:0004565	beta-galactosidase activity
molecular_function	GO:0043565	sequence-specific DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02216	0.91	Barchart \| Table
Spo12217	0.80	Barchart \| Table
Spo04348	0.79	Barchart \| Table
Spo03505	0.79	Barchart \| Table
Spo22322	0.78	Barchart \| Table
Spo20749	0.77	Barchart \| Table
Spo02440	0.77	Barchart \| Table
Spo16482	0.76	Barchart \| Table
Spo11193	0.76	Barchart \| Table
Spo16584	0.76	Barchart \| Table
Spo09150	0.76	Barchart \| Table
Spo24790	0.76	Barchart \| Table
Spo08147	0.75	Barchart \| Table
Spo20619	0.75	Barchart \| Table
Spo05529	0.75	Barchart \| Table
Spo13318	0.75	Barchart \| Table
Spo22460	0.75	Barchart \| Table
Spo03576	0.74	Barchart \| Table
Spo04104	0.74	Barchart \| Table
Spo23504	0.74	Barchart \| Table
Spo00180	0.73	Barchart \| Table
Spo24809	0.73	Barchart \| Table
Spo14545	0.73	Barchart \| Table
Spo02685	0.73	Barchart \| Table
Spo05269	0.73	Barchart \| Table
Spo12594	0.73	Barchart \| Table
Spo23939	0.73	Barchart \| Table
Spo15117	0.73	Barchart \| Table
Spo22463	0.73	Barchart \| Table
Spo06829	0.73	Barchart \| Table
Spo25874	0.73	Barchart \| Table
Spo19210	0.73	Barchart \| Table
Spo25787	0.73	Barchart \| Table
Spo22364	0.73	Barchart \| Table
Spo03611	0.73	Barchart \| Table
Spo00361	0.73	Barchart \| Table
Spo23231	0.73	Barchart \| Table
Spo21658	0.72	Barchart \| Table
Spo24597	0.72	Barchart \| Table
Spo01482	0.72	Barchart \| Table
Spo12972	0.72	Barchart \| Table
Spo03068	0.72	Barchart \| Table
Spo02252	0.72	Barchart \| Table
Spo11203	0.72	Barchart \| Table
Spo01691	0.72	Barchart \| Table
Spo00546	0.72	Barchart \| Table
Spo03575	0.72	Barchart \| Table
Spo00840	0.72	Barchart \| Table
Spo09762	0.72	Barchart \| Table
Spo04127	0.72	Barchart \| Table
Spo25641	0.72	Barchart \| Table
Spo24841	0.72	Barchart \| Table
Spo27203	0.72	Barchart \| Table
Spo01612	0.72	Barchart \| Table
Spo18120	0.72	Barchart \| Table
Spo04892	0.71	Barchart \| Table
Spo13527	0.71	Barchart \| Table
Spo21474	0.71	Barchart \| Table
Spo12921	0.71	Barchart \| Table
Spo22666	0.71	Barchart \| Table
Spo01198	0.71	Barchart \| Table
Spo14995	0.71	Barchart \| Table
Spo07791	0.71	Barchart \| Table
Spo22285	0.71	Barchart \| Table
Spo00204	0.71	Barchart \| Table
Spo09918	0.71	Barchart \| Table
Spo19773	0.71	Barchart \| Table
Spo10752	0.71	Barchart \| Table
Spo04763	0.71	Barchart \| Table
Spo10861	0.70	Barchart \| Table
Spo20446	0.70	Barchart \| Table
Spo14032	0.70	Barchart \| Table
Spo14130	0.70	Barchart \| Table
Spo00670	0.70	Barchart \| Table
Spo21105	0.70	Barchart \| Table
Spo20958	0.70	Barchart \| Table
Spo20887	0.70	Barchart \| Table
Spo26214	0.70	Barchart \| Table
Spo17085	0.70	Barchart \| Table
Spo25822	0.70	Barchart \| Table
Spo17630	0.70	Barchart \| Table
Spo05213	0.70	Barchart \| Table
Spo24562	0.70	Barchart \| Table
Spo24544	0.70	Barchart \| Table
Spo23932	0.70	Barchart \| Table
Spo07305	0.70	Barchart \| Table
Spo18646	0.70	Barchart \| Table
Spo23380	0.70	Barchart \| Table
Spo07870	0.70	Barchart \| Table
Spo08312	0.70	Barchart \| Table
Spo22543	0.70	Barchart \| Table
Spo09352	0.70	Barchart \| Table
Spo19491	0.70	Barchart \| Table
Spo00340	0.70	Barchart \| Table
Spo20536	0.70	Barchart \| Table
Spo10568	0.70	Barchart \| Table
Spo22054	0.69	Barchart \| Table
Spo05897	0.69	Barchart \| Table
Spo05894	0.69	Barchart \| Table
Spo18130	0.69	Barchart \| Table
Spo08522	0.69	Barchart \| Table
Spo08533	0.69	Barchart \| Table
Spo05640	0.69	Barchart \| Table
Spo05076	0.69	Barchart \| Table
Spo16321	0.69	Barchart \| Table
Spo22506	0.69	Barchart \| Table
Spo24990	0.69	Barchart \| Table
Spo15869	0.69	Barchart \| Table
Spo26677	0.69	Barchart \| Table
Spo02479	0.69	Barchart \| Table
Spo25883	0.69	Barchart \| Table
Spo03683	0.69	Barchart \| Table
Spo07079	0.69	Barchart \| Table
Spo21558	0.69	Barchart \| Table
Spo07307	0.69	Barchart \| Table
Spo13492	0.69	Barchart \| Table
Spo20772	0.69	Barchart \| Table
Spo00385	0.69	Barchart \| Table
Spo01371	0.69	Barchart \| Table
Spo20894	0.69	Barchart \| Table
Spo02947	0.69	Barchart \| Table
Spo22796	0.69	Barchart \| Table
Spo24760	0.69	Barchart \| Table
Spo16206	0.68	Barchart \| Table
Spo16733	0.68	Barchart \| Table
Spo20692	0.68	Barchart \| Table
Spo18234	0.68	Barchart \| Table
Spo02579	0.68	Barchart \| Table
Spo19830	0.68	Barchart \| Table
Spo26672	0.68	Barchart \| Table
Spo26235	0.68	Barchart \| Table
Spo25994	0.68	Barchart \| Table
Spo03641	0.68	Barchart \| Table
Spo03686	0.68	Barchart \| Table
Spo04272	0.68	Barchart \| Table
Spo25873	0.68	Barchart \| Table
Spo04703	0.68	Barchart \| Table
Spo05674	0.68	Barchart \| Table
Spo05816	0.68	Barchart \| Table
Spo06078	0.68	Barchart \| Table
Spo01442	0.68	Barchart \| Table
Spo06755	0.68	Barchart \| Table
Spo24426	0.68	Barchart \| Table
Spo07623	0.68	Barchart \| Table
Spo08359	0.68	Barchart \| Table
Spo08416	0.68	Barchart \| Table
Spo22458	0.68	Barchart \| Table
Spo10502	0.68	Barchart \| Table
Spo10585	0.68	Barchart \| Table
Spo22323	0.68	Barchart \| Table
Spo10895	0.68	Barchart \| Table
Spo21769	0.68	Barchart \| Table
Spo11233	0.68	Barchart \| Table
Spo13245	0.68	Barchart \| Table
Spo13479	0.68	Barchart \| Table
Spo21649	0.68	Barchart \| Table
Spo15145	0.68	Barchart \| Table
Spo30025	0.67	Barchart \| Table
Spo01606	0.67	Barchart \| Table
Spo01615	0.67	Barchart \| Table
Spo01801	0.67	Barchart \| Table
Spo01807	0.67	Barchart \| Table
Spo02341	0.67	Barchart \| Table
Spo03057	0.67	Barchart \| Table
Spo03281	0.67	Barchart \| Table
Spo03846	0.67	Barchart \| Table
Spo05182	0.67	Barchart \| Table
Spo05230	0.67	Barchart \| Table
Spo06344	0.67	Barchart \| Table
Spo06667	0.67	Barchart \| Table
Spo07725	0.67	Barchart \| Table
Spo08504	0.67	Barchart \| Table
Spo08539	0.67	Barchart \| Table
Spo10171	0.67	Barchart \| Table
Spo10581	0.67	Barchart \| Table
Spo10935	0.67	Barchart \| Table
Spo11603	0.67	Barchart \| Table
Spo12218	0.67	Barchart \| Table
Spo14867	0.67	Barchart \| Table
Spo16568	0.67	Barchart \| Table
Spo16687	0.67	Barchart \| Table
Spo17123	0.67	Barchart \| Table
Spo17190	0.67	Barchart \| Table
Spo18414	0.67	Barchart \| Table
Spo19388	0.67	Barchart \| Table
Spo20114	0.67	Barchart \| Table
Spo20924	0.67	Barchart \| Table
Spo21683	0.67	Barchart \| Table
Spo22053	0.67	Barchart \| Table
Spo24516	0.67	Barchart \| Table
Spo25846	0.67	Barchart \| Table
Spo26198	0.67	Barchart \| Table
Spo26728	0.67	Barchart \| Table
Spo16884	0.66	Barchart \| Table
Spo04988	0.66	Barchart \| Table
Spo04987	0.66	Barchart \| Table
Spo04663	0.66	Barchart \| Table
Spo04373	0.66	Barchart \| Table
Spo25823	0.66	Barchart \| Table
Spo01299	0.66	Barchart \| Table
Spo03851	0.66	Barchart \| Table
Spo03627	0.66	Barchart \| Table
Spo27224	0.66	Barchart \| Table
Spo03557	0.66	Barchart \| Table
Spo03509	0.66	Barchart \| Table
Spo20115	0.66	Barchart \| Table
Spo19930	0.66	Barchart \| Table
Spo19749	0.66	Barchart \| Table
Spo16992	0.66	Barchart \| Table
Spo16492	0.66	Barchart \| Table
Spo26545	0.66	Barchart \| Table
Spo15366	0.66	Barchart \| Table
Spo21289	0.66	Barchart \| Table
Spo15269	0.66	Barchart \| Table
Spo14910	0.66	Barchart \| Table
Spo03077	0.66	Barchart \| Table
Spo11202	0.66	Barchart \| Table
Spo02499	0.66	Barchart \| Table
Spo10937	0.66	Barchart \| Table
Spo22175	0.66	Barchart \| Table
Spo22211	0.66	Barchart \| Table
Spo10889	0.66	Barchart \| Table
Spo10653	0.66	Barchart \| Table
Spo10586	0.66	Barchart \| Table
Spo10426	0.66	Barchart \| Table
Spo10080	0.66	Barchart \| Table
Spo09622	0.66	Barchart \| Table
Spo22461	0.66	Barchart \| Table
Spo09489	0.66	Barchart \| Table
Spo22528	0.66	Barchart \| Table
Spo09027	0.66	Barchart \| Table
Spo08968	0.66	Barchart \| Table
Spo08116	0.66	Barchart \| Table
Spo07649	0.66	Barchart \| Table
Spo07626	0.66	Barchart \| Table
Spo23385	0.66	Barchart \| Table
Spo07229	0.66	Barchart \| Table
Spo23889	0.66	Barchart \| Table
Spo07092	0.66	Barchart \| Table
Spo06859	0.66	Barchart \| Table
Spo06646	0.66	Barchart \| Table
Spo06431	0.66	Barchart \| Table
Spo06210	0.66	Barchart \| Table
Spo05961	0.66	Barchart \| Table
Spo24787	0.66	Barchart \| Table
Spo05709	0.66	Barchart \| Table
Spo05255	0.66	Barchart \| Table
Spo05015	0.66	Barchart \| Table
Spo24866	0.66	Barchart \| Table
Spo16873	0.65	Barchart \| Table
Spo03966	0.65	Barchart \| Table
Spo09062	0.65	Barchart \| Table
Spo15430	0.65	Barchart \| Table
Spo23589	0.65	Barchart \| Table
Spo18160	0.65	Barchart \| Table
Spo20806	0.65	Barchart \| Table
Spo14999	0.65	Barchart \| Table
Spo22345	0.65	Barchart \| Table
Spo12025	0.65	Barchart \| Table
Spo18565	0.65	Barchart \| Table
Spo06756	0.65	Barchart \| Table
Spo00358	0.65	Barchart \| Table
Spo04279	0.65	Barchart \| Table
Spo22166	0.65	Barchart \| Table