Spo22131 (gene)

Overview
NameSpo22131
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00309 : 227711 .. 231414 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGAGGATATTTGCCGCCAGAGTAAAAATAGAATTTGGATTTAGTTTTCTAAAATCTTTTGAAACCGCCGAAGACCCTAAGAAAAAAAATAAGAAAAGTCGTCCTTAGGTTTAATTTATCAGAAATTCTATCATAACTTTCCTCTTCCAAAACCAAGGCAACAATTCATCCTTAGGTTTAATTTATCAGAAAATCGTCGTCTCGTCGTGGTCTTGATTTCAAGTTTCATCGAATTCGTTCTTCGAATTTCAGGATTCATCACATTCGCACATCCAATTACGTGTCTTAATCGTTGTCTTGCTCGTGGACTCGTGGACTTGATCGGGATTTTATCGAATTCGCGATTCCAATTTCATGTACTTTTTGATTTGTGAGTGTTCTTCATTTTTTTGGTTATTTAATTCTTTATTTTCAAGATTTCTATGAATTATTAAAATATAGATTATAGTGGTTTTTTTCGATTGGATTCTGAGCGTTATTGATTTTTTGTTTGATGCAGGGTAACTTTTTTTTGATTCTATGATTCAGTATTTTGATTCTGTGTGTTTGGTTTTGGTTTGGTTGCTAACCGTGAGTCTGTGTGTTTGGTTTGGTTTGGTCTGGTTGCCGACTGTGAGTCTGTATTTGGTTTGCAACTGCTATTTCTTGGAGCAGGTTGATGTATGATGTTCTTTCTCTCTGCTTATGGTTTTATTTTCTGCGTTTTTTGGTTCTCTGTAGTGAGGGATTCAAGTTTCCGAAGTCTGTTTGGTGCTAGTTGCTTTGTTTTTTTTGGTAGTTGTTGCATTCTTTTGTTTCTGGTAGATGGTAAACTCAAGCTAGGTTGAATGGTGACTGTAGTTTTCGGTTTGGGTTTTGGGTTTTCTAGTCCATAGTTGGATGTTTATGTAGAGGGGCAATCTGAAGACACATACTCCATACATAAGTGGAGCTCTTGAACCTACTGAGGATCTAAACTTAATTAGCTATTGTTAATGATGGTGTTATAAGCTGTTGTAGAGGAGTCATTTCTGAAAGAGTTGAGGTGCAACCACACACGAACAATGATTCAAATGTTGATGTCCATGAAGATAGTTCCGATCTTGATGAGACTGATTGGGATTGGATGAACCATTAGCCGGATTTGTCTTATTATTTTAGAGGATTGTTGAGCTTTATTTCTTGCTTTCAGTTTATTATGTTGTTTTCATAGTTGTAAAACATTTTCTTATTAATTTTTCCATTCTTGTTTAGTAGTACATCATTTAGTGGTTTTTAATTTTTCTCTTGGTGTGATAAGCAGGGGCCGTGTACTATACTAGAACTAAACAGTTTGGTAGATCCTGGAACTAATCCCTGGAGAGCTACTAGTGCATTTGGTAACATCAGGTGATTATTGAATAAATTATGGAAAATTATGCCTATTTATCTATTTTTATTTGTTATACTAGTGATCAGATGACCTTAAGTCTTTGATTATCAACGCTTGTATGTAGACAATATTTTTACCCTGTGCATTTTCTTACTATTCATATACTTATACTGTCAGTCAGTCACTGATATTTTTTATCCTCAAGTATTTTATGTTTTAGTCTTTGATTATTTGCTTTTATGTGGAATAAATGTTAATTCTGAGTCTTTTTAGTCATATGGCATTACTGAAAAGTGAGAACTGCATTGGATTTTTAGGAGTCATTCAATACTGGTGGTTCTTACGCGTATGTGTAATAATGAATCAATTGATGTATGAGGTTTTGGGTTTCTAGACCATGGATTGAAATCTAATTTACTTGTCATTTTCTTCAGATATTAGGCAATTCTGGAATGTTATGTAGAAATGCACTGACAAAAAGAAAAAAGAACTCATGTGTGTTAAGAGGTTTATTTGTCTTTTGCTTTGCTGCTCAATTGGTTCAGTGTAGTAATTTTCGTAATGTTTCAATGCTTGAATGCTGTGTAATTATAATATAGAAGGAAGTGAAAGATAACACTTAAAAGATTCATCGGAATGACTTTATTGTTGAACCAGCTATTTGCATATATCGCCTAATAAAAGTGGGAAATTAGTAAAAGATGGTTTTATATACTGTCTTGGTTATACTTGTTTTTCTGCCTGGATTTTGCTCCTGTCCTGGGATAAATTTTGGTCTTCGGTTGCTTTCGGTTGCCCTTCCCCGCAAAGTTATTGATTTCTAGGAGCTTTGATTTGAGAAGAACATCTAGATGGAATTGCACATTATCTTTGGACTGCCTTCCTTAATAACAGTAACGTTTAGAATTAATTGTTTGTTGTTGATTGCGATTAATGAGAAGCAATCCACAATAGTTAAATGAGACAATGTGGAATGTAATGAAAAGAATTCAGTTACACCTTTCTGTATAAATTAAGTCATTTTGGTGGAGGGAGAGGGGAGGAAAATTAAAAGAGCCTCCTTCAAATGTTAGAATATAGGTTAAGCTGATAGAGCAAGCAGTGTGGCCGACATAACATTTGTGTTCATTGATGCTGTGTTGATTTGTACAAAATGTGAGCGGTATTGTTTTAGGACCAACTTGAACACTGAATGTTACTAAGAGAAATCATACCATGGATATCATTTGTTTCTTGCTTGCCATATCTTGTATATAATAACAGCTGACCAGGTGAATTATCCAGACTAAACTGGCCTAAAACAGACCCAACCAATTTAATCAGACTTGCATACTAGAACAAGCAGGACAACAACTCAGTAGAACATAACCGTATTAGAGGACTAGGAATTAGAAATTCTCCATTAACTGAGATTATTGATATCTTTTCGTTTTGGTTATATTTCTTTTTTCGTCATGTGGCTGTGTGTTACTTGTTATATACTTTTGGAATAGGGTTGTTGTCACACTGTTTTGGCTTGGATGGGTCTAACAAAGTAAAATGAAAACTCGTCTTTTTTTGCTGGGCAGGACCCGAATCCTAAAGGCGAAAACCCAAAATCAAACTGAACAAGCCTAAAAAACCAAGGCCAACAAAAAAAAGAAACCTAAGGCTATATTGTTTTTGCTTCAATTACTTACTATGTTTTTGGTAAGTGGTACCCTTGACTGGTTTTGTTTTGGTGTTTGTTGATGAGCTTTAGCCCTGTTTTATAAAAGTTAACATACAACTTAGTAGGTCTTGCAAACATAAAAGTAAACAAGTATTGCAATTTGTAGCAGAATACCTAGCTCACAAATTTGTTTCATCTTAACTTCAGTTCTTGTAATGCAATTTCTGGTTGTGCTTTATGTGCTTTATATTATTATGGATGTTGGATCTTACTAATTTTATATTTATCTATGATCAAGATGATGGATTGGATCGGATAGCAAATGAAGATTAAAGTTGACATTGAGAATCATGCGCACGTAAGGGAAACCAGTTGAAGATGAAAAGATAGAAGACATTTAGTTTTGGATTATACATTTTAGTTTTGGATATGATCATTTGATTTTATTTTGAACATAATAATGTAATTTTCATAGATCGTACATCAAATACTATTATTTTAATTAATTTGTTAATTAGTTTGTTAGGGAGCGGGTTGTGCTCCCTTCCTTTAGTTGTTTCCTTGTTTGGAACTTATTTTGTGTACATACTATCTTTTGGTAATAAAATTGCTATTTTACCAAAAAAAAATTATAAATTTATTATTTATTATAAATATTATTATTTATGAACCAATTTTGTAATATTTGTTAAATTAT

mRNA sequence

ATGAAAGGAGGATATTTGCCGCCAGAGTTTAATTTATCAGAAAATCGTCGTCTCGTCGTGGTCTTGATTTCAAGTTTCATCGAATTCGTTCTTCGAATTTCAGGATTCATCACATTCGCACATCCAATTACGTGTCTTAATCGTTGTCTTGCTCGTGGACTCGTGGACTTGATCGGGATTTTATCGAATTCGCGATTCCAATTTCATGGGCCGTGTACTATACTAGAACTAAACAGTTTGGTAGATCCTGGAACTAATCCCTGGAGAGCTACTAGTGCATTTGGTAACATCAGGACCCGAATCCTAAAGGCGAAAACCCAAAATCAAACTGAACAAGCCTAAAAAACCAAGGCCAACAAAAAAAAGAAACCTAAGGCTATATTGTTTTTGCTTCAATTACTTACTATGTTTTTGATGATGGATTGGATCGGATAGCAAATGAAGATTAAAGTTGACATTGAGAATCATGCGCACGTAAGGGAAACCAGTTGAAGATGAAAAGATAGAAGACATTTAGTTTTGGATTATACATTTTAGTTTTGGATATGATCATTTGATTTTATTTTGAACATAATAATGTAATTTTCATAGATCGTACATCAAATACTATTATTTTAATTAATTTGTTAATTAGTTTGTTAGGGAGCGGGTTGTGCTCCCTTCCTTTAGTTGTTTCCTTGTTTGGAACTTATTTTGTGTACATACTATCTTTTGGTAATAAAATTGCTATTTTACCAAAAAAAAATTATAAATTTATTATTTATTATAAATATTATTATTTATGAACCAATTTTGTAATATTTGTTAAATTAT

Coding sequence (CDS)

ATGAAAGGAGGATATTTGCCGCCAGAGTTTAATTTATCAGAAAATCGTCGTCTCGTCGTGGTCTTGATTTCAAGTTTCATCGAATTCGTTCTTCGAATTTCAGGATTCATCACATTCGCACATCCAATTACGTGTCTTAATCGTTGTCTTGCTCGTGGACTCGTGGACTTGATCGGGATTTTATCGAATTCGCGATTCCAATTTCATGGGCCGTGTACTATACTAGAACTAAACAGTTTGGTAGATCCTGGAACTAATCCCTGGAGAGCTACTAGTGCATTTGGTAACATCAGGACCCGAATCCTAAAGGCGAAAACCCAAAATCAAACTGAACAAGCCTAA

Protein sequence

MKGGYLPPEFNLSENRRLVVVLISSFIEFVLRISGFITFAHPITCLNRCLARGLVDLIGILSNSRFQFHGPCTILELNSLVDPGTNPWRATSAFGNIRTRILKAKTQNQTEQA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22131.1Spo22131.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo22131.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22131.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22131.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22131.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007049 cell cycle
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0009432 SOS response
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0045747 positive regulation of Notch signaling pathway
biological_process GO:0045900 negative regulation of translational elongation
biological_process GO:0006614 SRP-dependent cotranslational protein targeting to membrane
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0009691 cytokinin biosynthetic process
biological_process GO:0000165 MAPK cascade
biological_process GO:0006468 protein phosphorylation
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0032259 methylation
biological_process GO:0061025 membrane fusion
biological_process GO:0016049 cell growth
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006281 DNA repair
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006221 pyrimidine nucleotide biosynthetic process
biological_process GO:0006508 proteolysis
biological_process GO:0006465 signal peptide processing
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0000902 cell morphogenesis
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0090406 pollen tube
cellular_component GO:0031225 anchored component of membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0009536 plastid
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0005773 vacuole
cellular_component GO:0005786 signal recognition particle, endoplasmic reticulum targeting
molecular_function GO:0003924 GTPase activity
molecular_function GO:0019003 GDP binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005047 signal recognition particle binding
molecular_function GO:0008312 7S RNA binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005525 GTP binding
RNA-Seq Expression