Spo22185 (gene)

Overview
NameSpo22185
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRibosome recycling factor family protein
LocationSuper_scaffold_139 : 612814 .. 622553 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAGCAAATATTTTTAGCTTTTGAAAAAAAAAAAGGTTTTCTGAATTTGTAAAGACGTCTTTCTCTCACTCTTATCCGAAGGTCGTGCTTGCTCTTTGTCTCCCCAAACCTCGGGTGTCACTACTCGTCTGTCTACTGTCTCATCACCAATCTCAGCTCTAATGGCGGCATCGTCACTTTCCTCTGCAACTTCTTATCTTCACTCTTTTAGGCGTCGCAACTCCTGCGTCTCTCTTCAAGGTTCGTTTTCTTCATCAATTACCTCTCTTCAATTTTTGTAGTTCATCCTCAACTTATCGTTCAATACAATATTTGAACTATAATTGAGGTGGAAAACCCGAATTCGGTAGAATTTCTTGTCATTTTTGAATTCGAATTCTGTTCAAAAGACGAATAAGAAATTATCTGTAATGGCTTTGTGAATGTCGCCTTGTTAAGTTGAGAATTAGGTATCCTTTGTTGAATGTTGAGAATTGTACTATAAATGGCACGATTTTGTTCAGGTGTTAGCGATATGGAATGTAATATTGCGCGAACCAACGTTTCAGTCTGGAGGTCTTCTGCTAACTATGTTAGGATGGATTGTGGTGTTAAGAAGTTTTCTGGGAAGGCTGTTGTTGTGAAACAGTTGCAAAACCGGTATGTCTGTTACTTTGGTGTTGAGTCCTTTTGGTTTTTGATGAACATATAGGGTTAAGAGACTGGCGAGTGAGTTACAAAGTTTTGATGTACTCTGGTGGTTTTACTTCAGAGCAGGAACTTTTAGGTGTGCAACTATGGAGGAAGTCGAAGCTGAAAAGTCGTTGATAGAGACGAACACAGTAAGTCTACTTTCCGGAATTTAAGTTTAAGTGTTACTTAAAAACAGGAATTTTCGTTTGCATTCCTTGATATATTGGGCATGCTTGACTAGGTATGGAAACTAATCCTTTGTGATTTTTTCTTTTGAAGAAACAAAGGATGGAGAAGACTATTGAAACAATACGCTCAAATTTCAATTCAGTAAGGACAAATCGAGCTAGTCCAACAATGTTGGATCGGATAGAGGTGTGCGTCCCAATTTTCCTGCAACATTAATTTCTCTGTTATGTCTTATAAATTATTAGGTGTTATCATTGTCTTATACAAATGTCCAATCTTAATTGGGTGCAATGCCTGAATCGCCTGTGCGAGCTATTTATTTCAGCTCATTCGTATTTGAACCTTCCATTACCTTGTTTGACCAAATATGCCTGAACAGGTTGAGTACTATGGAACTCCTGTCAGCTTGAAAAGCATTGCTCAAATTAGTACCCCAGATGCTAGTTCCCTTTTGATATCACCATATGACAAATCAAGGTATGGATTTTGAAAGTCCAAAATTATTTGCAGTGCAGGTTTTTCTTTTTTTATGTAGGGGACTTTGTTTACCACTAGTGTACGCAGGTGGAAGTTTTCTTACGGCTCAAACAAATAAGAAATGTTATGCTATGTACATCCGACTTAAGCATTTTTGGTAACCACACTCAATCCGTCAACCGTAAATTTGTAATAAGGATTAGGCTATTGCATTCACTACCCAGCACTTGACCTTACAATTGGACACTTCCTGAACTAGAAGGAAGATGAGAGAGAGGGAAAAAAGAAGAAGAAAAGCTTAGGAGAGTGCAATCAACCTACATGGAATAGATTTCTATTTGGAGAGTGATGTAGAGGTCCTTCAGTGGTATATTTATGCATGGGTAAAATGTTTTAAAGAAATTAGATGAGAGCAATTATAGTAGTTTAATTTTAAATTAGGAAATGGAATTTTGAAAATTTTCTTCAATTTTCTTTTCGGAGAATGTTTATAGATAAGGTGCTGTTATCGCCCTCCACCATGATTCCCCACCCCACCCTGTGACTTGCATTCCTCACTCCCTCTTGCTCTTCCTTATACTCCACAACCTTACAACATCAGCCATCACCACCCAAAATGGTAGTGGTTAGAGAAAGAAGAAGGTGAACAAATTTTACAGAAATATGACCCATGGAGGCACACTAAAAGCTGTGAGGGAGGGAGGTATACGACAGATGATATGAGGCTTTTGATAGTGGGAGAAATACATACTAGTGCTGTCCCTTTCTATTGTTTTGTAAGCAAACATTAATTAAGTAAGCAAGATACCTTTTCTCAGTGTAACCAAACAAAAATATGAAATTTCTTGTTTTCTTTCTCCTTATTTTCATTTCTTGATTCCTTGTCCTTTCCCTTTTGTGGACCAAACAGCCCTCTAATAGTTATCAATTTATGATATTGATGAGTAAGAGGACAGAATTCACTCATGGTTATGAGAATTTAGGATGGTGAATTATAGTTTTACCTCTTCATAATGTATTATAAAATTACTGATGTGGTCTTGCTTTTATGCTTTTGATCAAGAGGATACACCTTTTGGAAATTGTATTTTTAAGGGTAAAAGCCTTCTGTATGTATGGAAAGAACGAGTTCATAATTAGTTTCTTGTAAATAAAAAAAAACGGAGTCAACAATTCCAATTTAATTTCATTATTTCTTTCTTGAAAACTATTTGTAATACTCCATGTACATAGTAATCTGAATGTACACAAAAAGCTACTTGTTTATTATTTTGATTATATACAAGTACAGTCAATAGATCACACTGTGATGTTTGGTTTTCAGCTTGAAGGCCATAGAGAAGGCAATAGTTACCTCTCAACTTGGTGTTAGTCCAAATAATGACGGTGAAGTTATCCGGCTGTCCCTCCCTCCATTAACTTCAGATAGAAGGAAGGTAGTCTTCAATGATCTTGAACTATAGAGTATAAATTCATTTACCTAACTATCAAAGGCTCAAAGCCATAAATGAAAACAGTAGACGTGTTCTGACAAGATTTTGGAATAGCGTTTGTAATTATTCTTCAAATATACCTTTTCTCCTTATTCATACTGTTATTTGTCTGAGTTATTTGTTCTTTGTAGACTTGGACAGTAGTAACTTTTCTATTAAGATAGTTGGAGAACACTTGGTTCATGTTTATGAAAGGATTAATTTACCCTTATTTTTAATCATCGATGAGAATTATGGGCTGAAAAAGACCATGTCAGCTATCACCCATTCCACAATATGTGTATAGTATATCTAATTGGATAAAAATAGTGTAAATAGAATATATAATTATTTTTATGCTAACTTTTGCATTTTAGCACTCATCAGATTTATATCCCATATTCCCACCATCAAGAAGAGGTGTGCCTTGTGTTGGTCACATAAATTTACCGGCCCGTAGTTTTTACTGGTGGTTTAGAAAAGTATAAAGCTAAAACATTTCTTTTGAGAAATATACGAAAGGTTCCAAATTTAGATGAAAATATGTATAATCGTGGACAGCCTGGATAAGCATTTCGTAGTTTAGCCCGTTAGATACTTTTTCTTATACTGATCTTCAAGCATATTCTACTCTAATATTCTTAGTTTGTTGGGGGTGGGTGGAATCTGATTATGTCGGAGTTATGATATACTCCATAGTAAATTCAACTTTTTGCTTGTGTGGTTGGTAACTTTTTTCTTTGACAAGTTGTGTTTTTTCTTGGAAAATGAAGACCTTCCATATGGTTTGTAACATTCAGTAAAAAATTACTTTGTTTTTGTATCCTAATTGCATTATGTGCCTTGAGACTTTGGATCATGAGTAATGTACTCCCTAACAGATTAGTTTTTACACTTTACATTTTCATCCGTCCTAGATTAGTTTTTATACATTTTTTTGGGAAAGACCTCACAATTATTTTAATACATCTCTCTTTGTACTACCAAAAAGCTAAGGTCCCACACTCTCTCACATTAAATTAAAAAAAAATACTCCACTATCTTCTATAGTTCTATTACATCTACTTTTCAATAAAATAATACTCCACTATCTCCTTTCACATCAACTGTTTCAGTAAAATAATATTTGATAACCAAACAACAATTTATCTCCTAAAACTACGTTTCCTGATAACTGTCAAAACTAATGTCGGACGAATAGAGTAAAAAAATAAGTCAAAAGAAAGTAGTAAATAAAAGAAATTAAAAAAATGCACAGTATTAAGTCCGGGTCGATTCTTCAGAGGAGTAGAGAAATTGACCAAGATGTGACATTGTGACCCAATCATATTAGAAAGATGAGAGTAGTAGAGATGCGTATGTTGAGATGGTTGTGGGTGGAGCTGTCAAAAATCGACCCGACCCGAAAACCGACCCGAACCCGACCCGAAATTACTGGGTCCTGAACAAGATTTTGTGACCCGTAACCCGATTTTATCCGAACCCGAACAACCCGAAAAGGAATGGGTCAAAACCCGACCGAACCCGTTTTAGACCCGACCGATTGAAAATCATTGTATTTATAGTAATAAATGAGATTATGAGAAAATTTAAGCATAAAAGACACGTTGTTTTTACTATTGTTCTGTGTAATATGATTTTAATTTGAATTATACGCCATTTTATGATTGAATTTGACAAAATATAAACTTTCGTAGGAAAATTTGTTAACTTGTGCCAATATTTTGTATATTTTTCACCTAAATTAATGAAAATATAATGCGCGTTTTAAAATCTCTCAACCCGTTGGGTCGACCCGAACCCGAAAGTTCTGGGTCTTGAACAAGCATTTGTAAACCCGAACCCGAAATTGACCGACCCGATTCAACCCGAACCCGAAAGTAAATTTTTACAACCCGACCCGACCGACCCGTTTGACAGGTCTAGTTGTGGGGGAACTCCTTAAAGGATAGAATTACAAATGAAGATTTTAGGAGGAAAGTTGGAGTTGCCGATATTGAGGATATAATACGCGAGAACTAAAAGCAGTGTTTTGGGTATGACGGAGATCAGAAGATGCGCAATCATGGGCATCTTAGAAGAAGCCAAGGGAGACCGAGAACGACTTGAATGGAAGGAGTTAAGAATGATATGAAGAAGTTGGGTTTACATGAGCATATAATACTTGATAGAAGGGAATGGGGGGAGAGCATCATGTTTGATGATCACATGAGATAAAATCTTGGTTCATGTAGCAGAACCATCATTGGGATCAAGGCTTTGATTTTGTTGTTGTAGAAATGCAATATGATGTTTCACTATACATTATTGGCCCCCTCAAACAAAACTTTAAAATCATTGTGTATTACACCTAAAATTTGGCATTCCATTTCATGTCCTTGTATACTGCCAGCCAATAATTCAGCCAAANCCCCCCCCCCCCCCAATACTGGAGTTGTAAATGCTTTATACTTTAGTGAAATCGTAATTGATCCATCTTTTATGGTATAACCGTATAATCAATGACCTGATAATGTAAGAAGAGTTTTACTAGAGGCTGGTTTTCCTTTTCCACTGTTCTTTTCCAGAGTAGTTTCTTACTTCTTGTAATATTACTTGGCTTGGAAAATATTCTTGGAATATTTTATTTGACCTCACTCAGCGTTAGATTCCTTGCATCTTTATTGCAGGAGCTTGCGAAAGTTGTTTCTAAACTTGCAGAAGAAGGAAAGGTGTGTTTTCATCTAGTGAATTGTTTGTATACCTTTCCATTTATGTTGTAAAAACTAGAGCCAAGGGCTTGTTTGGATAATATTGATATTGTTCATTATTCGATGACCAGTTGGTCATTATTTCAAATCGAAACATTGCTTCTAGTCTCCTGCATTTGGAAGGGTAATGCTTTGTTTGTTAAGAGTCTTAAGACCCTTATCTATGTGCTCATGGACTTCCCATGTTTGCATAGACCATTTAATTGGCAGTTGAGCTTCTGATGGTTAATTATAAGGTCTTCACTTGATTGACAGAGGTTGTTTGTATTGTATTTTGCTATTTGGTGGTTGTCTTTACTAGTTTGACATCCATACACTTCTGTATGCATGCTTTGTTTGAAAGGACTTGTGGCTTAAGTGTCTAGATGCTTCTCCCAGGCACTCTTGTGAGCATTTGCCTCACAAAAGGTTTTCACGTGATTGCTAGGGTAGTGAGGATTCTGCAATCTTTCGCTTAAAAATCACCTGTATAAAGTGTAAAACATCATCGCAAAAGTTTTGTTAAAGGTCGGCCCAATAATGTAAAAAAATCACTCTTACTTGGCAATGATTTAGTGAATGACAAATTTCACGGACAAATTCATTTTTCAGCATAAGCCTCTGGCAAACTTCTATGTATAAACTGTCTTGTATAAAACTTCTGTAAAGAATGTTAGGCGAAATTTTGATAATGGCTTTGTATGATTGATTATGGGTTGATGCATAACTGAGTTTAGGAGTTTTGGAATGTTTTAACAACTTTAGATATTTTATTTTCATAACTTCCCTGTGGCATCTAAGCGTAGAAATATAAAATATAATTTTGCTTACTACTTATTGTTGCTGTACTAAAGAATTACTAAATCTCCTTAAAATAATTAGCAAATGAGTTGGCTTTGCTTGTGAACTTCCTGAAAATGAGACCTAAAGCTCAGCTGGCCTTTCTGTTAGTATAATTCAAAATCAGAGCTCAATCAAACATTGAAGCGAGCATTTCTACATCTTGAGCTATGCTGTTTGAATCATCACTCTGTTATTAACACTTTGCGGAATGTTATAGTTTGATCAATTTTTAACATGTGCGTATTCTGTTGCTAAATTTCTTTTCTCATAGGTTGCAGTGAGGAACATAAGAAGAGATGCTCTGAAATCTTATGAAAAACTTGAGAAGGTGTTGTTGATCTTTCAGTTGGTAATGCTGTAATTCTGACTTCGTGTGAAATGTTCACTACATTTTGTTTGTGATTCTCTTCATCCTCACAGGAAAAAAAGCTTTCGGAAGATAATGTGAAAGACCTATCGGCTGATCTGCAGGTGATATCAGGGTTTACAACTTTGTGAATTTAAATACATTNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTATTTCCTGATTTTACATGTCAAAATTTTTATTTGTACTGTCCAAGATCCTCTTCATTTCTGCTAAATAATTGTTAATAATTATTGAAAATTTATTTCTTCCCGTTTGTAGCTTAATACAGTTTTAATAAAAGTAAAGTGGAAATGATGTTGAATTTAAGGTTTTGCAGAACCTTTTGCTAGGAATTACTCCCTCCTTCCCTTTTTATTCTTTACATTAGGTATTAATGTATTATGCACGCAAATTTAAGCATAATAAAAAAGAGCTTTGATTCCTTTATTTTTTTAATTAAATACTTAGTATTAGAAATTCTGGTTTCTCATTAATTAAATGAGGTGAGTGGAGTGAAGGAATGGGAAACGGTGAGGTTAATTCAATGTTTGCGTATTTTATTAAATTTAGGTACATTTTCTTGTGGAATATTGGAAGGAAATATTCCAAACGTAAAGAATAAAAGGGGACGCCCAAAACTGAATACGTAAAGAGTAAAAAGGGAATGAGGGAGTACCATTTTAGGTCGCTTAAAAGTAAAGAAAGATGGTTTGAGGCATGTTTCTTGGACATTGCATTTCGGTGGCGTGTTTGACATTGTGTACTCTGTGCATGATTCAGAGATGCTCAGGGAACTAAAAATGTGACAGCTGGGGGGAAGAGCAAAACTAATAGAGCCAACAAAATCTGGTCTTTGCTTGCTTAAGAGCAAGGGGTTCAGAGATGCTCAGTGTTCAGAGGAGTAGAATTAGGCTAGTAAATACATGGATAGGAACTTTTAAAGATAACCTTTCAGATGTTAAGGTTATTATGCCCTTAAATTAGCACCCCTTAGAAAAGTTGGCAGTGATGTTTCCATGTCGATGATCCTTCACATCACATGAGGTTTTGTTTCGGGTTGGTTGCAATGGTTCGATAATCTTGAGGCAGAAAAGGACTTCTGCTCTCACGTGTATGTATACAGTATTCATGTAAATCTAGATCGTGTACATTGTGAAAGTCATGGGCTTGGCTTTGCCTTGTCTAGTTGGTAACAGTTGTAATCCATTGGGATAAGATGGTGCTAATGATGGATGTACAAATGGGCCCTGGTGAGTTTACCTCTATGCTCCATCTACTCAAGAAATTGTCTAGTTTTTTAGGTGACGTTAAGCAGATAAACGACTTCCTAAAATATAACCCTGGTTTTGGGACTGGCTGATGTTCCATTAAATTAACTTGGTAAATAGAATTGTTTGGAAGAGAAGTACATACGGTATTATTACCTCTGTCCAGACTTGGTTGTTACATTACTTGTTGACATAGCACTACTTTGGGGGATGATTATTTTATTACCGAAAGAATTACTGTGTAGCAAGTTATTCTTTCTGAAGATGAGTAATACCGATTTGTTGTAAATTAAGCAAGTTTTCTGCCTTTACCTCAATGTCCACCCTTAGCATTTTTGACAGTTCTTTGGACAGAACTTAGCCACTGTATGTTCTTTTTTTAATTACAGAAGTTGACCGATGAGTACATGAAGAAGGTTGAGTCTATCTACAAGCAGAAAGAACAGGTACTGTGTTGTGTTTTCTTGAATTTAATTTTGATGCAGTCAGAAAACAGGTCTAAACTAGCTACACGATATCGTTGGGGACATAAGATAAAATCAAAGTTTTATGTAAACCTTTTTTTGGCTTTCATCGACTGATTATGTTTTCATTTATCTTTCAGGAGTTAATGAAAGTCTAAAGCCAGTAGAATGACATAAACTTGCCAACTTCGCAAACTGTGAATTCCGATGTCCCTTAATGGTAAAACATGATGCCTGGTCTTTTGTTTGCAGTTTCTCTTGTGAATAACACTACAGATCCCCGGAAATAGGCTTTGATTTATCAAAACTCGGTAGAATTGATTACGCACCAAGTAATTTTGCCTACTTTATTTGTAATGGATTTCTGGGAAGATGGTAACCACTTTAATAGTCAAATGTTCATTCATACTTGATGTGATCGGTGTATGTCAGTTTAGTTGCTTGGATCCTTGAGACTCGGACATGGATATGGACACTTCAACACTCCATTTTAGACCAAAATCATGCATTTTTTTCACAAAATTAACGTATCATACACTTGGACACGTACATGTCTCCGACATGGTACTTGAGTCCGGGTGGCGAGTAATGTAGCTACTATCACCGTAGTAAATTAGCAATGTTTTTTTTAAACTAGCAATGTTGTTAATCACTAGGCACCTTTTCTGGTTAGGTCAAAAAGTATTTTCCTTTTTATAACGACTTTAGGACAAGGCTTGGTCAATCTATAGAATGTGGTTAAGACTTAAGAGGGTACCAAATGTGCTAGTGCTAACTGCTAAAAGAATACTTCGTATTTCATTTTCTACAGTGACGTTGTGGTTCTGTATAAATCATTAACATGCCTTGACGTTTTAATGTCCATTCCAATTAGTTTTCTAACCTTAAACATTATTACTAACCCCCTTTAATCATGGTTAATAAAATCCCCTTCTCTCTTTCCAATCCTCTCCAATCATTTGCGGTTCTGCTCCCTCTTCCACCATCGTCAGTGGCAGTTCCGCTTCAGCATCTACCGCTATCTCCCTCAACTTGCAGCAACACAATTCCTCCACCTCTCCGGCAATCCATCTGCTCTGTTAGATGACTGATTACTGATAGCAATGCCACCTCATATTACTACACTCAGCTGCTACGTCAGCTTGCTAGTTATATTGCTTCTCTTGAAATAAGGACTTTGTACTAACAAACTCAAGAAGCTTCTAGATTATTTGTTGCACT

mRNA sequence

GTTAGCAAATATTTTTAGCTTTTGAAAAAAAAAAAGGTTTTCTGAATTTGTAAAGACGTCTTTCTCTCACTCTTATCCGAAGGTCGTGCTTGCTCTTTGTCTCCCCAAACCTCGGGTGTCACTACTCGTCTGTCTACTGTCTCATCACCAATCTCAGCTCTAATGGCGGCATCGTCACTTTCCTCTGCAACTTCTTATCTTCACTCTTTTAGGCGTCGCAACTCCTGCGTCTCTCTTCAAGGTGTTAGCGATATGGAATGTAATATTGCGCGAACCAACGTTTCAGTCTGGAGGTCTTCTGCTAACTATGTTAGGATGGATTGTGGTGTTAAGAAGTTTTCTGGGAAGGCTGTTGTTGTGAAACAGTTGCAAAACCGAGCAGGAACTTTTAGGTGTGCAACTATGGAGGAAGTCGAAGCTGAAAAGTCGTTGATAGAGACGAACACAAAACAAAGGATGGAGAAGACTATTGAAACAATACGCTCAAATTTCAATTCAGTAAGGACAAATCGAGCTAGTCCAACAATGTTGGATCGGATAGAGGTTGAGTACTATGGAACTCCTGTCAGCTTGAAAAGCATTGCTCAAATTAGTACCCCAGATGCTAGTTCCCTTTTGATATCACCATATGACAAATCAAGCTTGAAGGCCATAGAGAAGGCAATAGTTACCTCTCAACTTGGTGTTAGTCCAAATAATGACGGTGAAGTTATCCGGCTGTCCCTCCCTCCATTAACTTCAGATAGAAGGAAGGAGCTTGCGAAAGTTGTTTCTAAACTTGCAGAAGAAGGAAAGGTTGCAGTGAGGAACATAAGAAGAGATGCTCTGAAATCTTATGAAAAACTTGAGAAGGAAAAAAAGCTTTCGGAAGATAATGTGAAAGACCTATCGGCTGATCTGCAGAAGTTGACCGATGAGTACATGAAGAAGGTTGAGTCTATCTACAAGCAGAAAGAACAGGAGTTAATGAAAGTCTAAAGCCAGTAGAATGACATAAACTTGCCAACTTCGCAAACTGTGAATTCCGATGTCCCTTAATGGTAAAACATGATGCCTGGTCTTTTGTTTGCAGTTTCTCTTGTGAATAACACTACAGATCCCCGGAAATAGGCTTTGATTTATCAAAACTCGGTAGAATTGATTACGCACCAAGTAATTTTGCCTACTTTATTTGTAATGGATTTCTGGGAAGATGGTAACCACTTTAATAGTCAAATGTTCATTCATACTTGATGTGATCGGTGTATGTCAGTTTAGTTGCTTGGATCCTTGAGACTCGGACATGGATATGGACACTTCAACACTCCATTTTAGACCAAAATCATGCATTTTTTTCACAAAATTAACGTATCATACACTTGGACACGTACATGTCTCCGACATGGTACTTGAGTCCGGGTGGCGAGTAATGTAGCTACTATCACCGTAGTAAATTAGCAATGTTTTTTTTAAACTAGCAATGTTGTTAATCACTAGGCACCTTTTCTGGTTAGGTCAAAAAGTATTTTCCTTTTTATAACGACTTTAGGACAAGGCTTGGTCAATCTATAGAATGTGGTTAAGACTTAAGAGGGTACCAAATGTGCTAGTGCTAACTGCTAAAAGAATACTTCGTATTTCATTTTCTACAGTGACGTTGTGGTTCTGTATAAATCATTAACATGCCTTGACGTTTTAATGTCCATTCCAATTAGTTTTCTAACCTTAAACATTATTACTAACCCCCTTTAATCATGGTTAATAAAATCCCCTTCTCTCTTTCCAATCCTCTCCAATCATTTGCGGTTCTGCTCCCTCTTCCACCATCGTCAGTGGCAGTTCCGCTTCAGCATCTACCGCTATCTCCCTCAACTTGCAGCAACACAATTCCTCCACCTCTCCGGCAATCCATCTGCTCTGTTAGATGACTGATTACTGATAGCAATGCCACCTCATATTACTACACTCAGCTGCTACGTCAGCTTGCTAGTTATATTGCTTCTCTTGAAATAAGGACTTTGTACTAACAAACTCAAGAAGCTTCTAGATTATTTGTTGCACT

Coding sequence (CDS)

ATGGCGGCATCGTCACTTTCCTCTGCAACTTCTTATCTTCACTCTTTTAGGCGTCGCAACTCCTGCGTCTCTCTTCAAGGTGTTAGCGATATGGAATGTAATATTGCGCGAACCAACGTTTCAGTCTGGAGGTCTTCTGCTAACTATGTTAGGATGGATTGTGGTGTTAAGAAGTTTTCTGGGAAGGCTGTTGTTGTGAAACAGTTGCAAAACCGAGCAGGAACTTTTAGGTGTGCAACTATGGAGGAAGTCGAAGCTGAAAAGTCGTTGATAGAGACGAACACAAAACAAAGGATGGAGAAGACTATTGAAACAATACGCTCAAATTTCAATTCAGTAAGGACAAATCGAGCTAGTCCAACAATGTTGGATCGGATAGAGGTTGAGTACTATGGAACTCCTGTCAGCTTGAAAAGCATTGCTCAAATTAGTACCCCAGATGCTAGTTCCCTTTTGATATCACCATATGACAAATCAAGCTTGAAGGCCATAGAGAAGGCAATAGTTACCTCTCAACTTGGTGTTAGTCCAAATAATGACGGTGAAGTTATCCGGCTGTCCCTCCCTCCATTAACTTCAGATAGAAGGAAGGAGCTTGCGAAAGTTGTTTCTAAACTTGCAGAAGAAGGAAAGGTTGCAGTGAGGAACATAAGAAGAGATGCTCTGAAATCTTATGAAAAACTTGAGAAGGAAAAAAAGCTTTCGGAAGATAATGTGAAAGACCTATCGGCTGATCTGCAGAAGTTGACCGATGAGTACATGAAGAAGGTTGAGTCTATCTACAAGCAGAAAGAACAGGAGTTAATGAAAGTCTAA

Protein sequence

MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22185.1Spo22185.1mRNA


Homology
[Close]
BLAST of Spo22185.1 vs. NCBI nr
Match: gi|7388105|sp|P82231.1|RRFC_SPIOL (RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF; AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName: Full=Ribosome-releasing factor, chloroplastic; Flags: Precursor)

HSP 1 Score: 499.6 bits (1285), Expect = 3.500e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60
           MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS
Sbjct: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60

Query: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120
           GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP
Sbjct: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120

Query: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180
           TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND
Sbjct: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180

Query: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240
           GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK
Sbjct: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240

Query: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           DLSADLQKLTDEYMKKVESIYKQKEQELMKV
Sbjct: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 271
[Close]
BLAST of Spo22185.1 vs. NCBI nr
Match: gi|731328647|ref|XP_010675165.1| (PREDICTED: ribosome-recycling factor, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 402.9 bits (1034), Expect = 4.400e-109
Identity = 217/276 (78.62%), Postives = 247/276 (89.49%), Query Frame = 1 

		  

Query: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECN-----IARTNVSVWRSSANYVRMDCG 60
           MA SSLSSAT YL +  R     SLQGVS++ECN     + RTNVS W S A+YVR++C 
Sbjct: 1   MATSSLSSATPYLQAIPRTKVSASLQGVSNVECNHLQHQVGRTNVSFWSSGASYVRLNCR 60

Query: 61  VKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRT 120
           V+KF  K+VVV   +NR GT +CAT+EE+EAEKS IE +TKQRMEKT+ET+RSNFNSVRT
Sbjct: 61  VQKFPVKSVVVNLSRNREGTIKCATIEEIEAEKSTIEKDTKQRMEKTLETVRSNFNSVRT 120

Query: 121 NRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGV 180
           NRASP+MLDR+EVEYYGTPVSLKSIAQ+S+PDASS+LISPYDKSSLKAIEKAIVTSQLG+
Sbjct: 121 NRASPSMLDRVEVEYYGTPVSLKSIAQVSSPDASSILISPYDKSSLKAIEKAIVTSQLGL 180

Query: 181 SPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLS 240
           SPNNDG+VIRLSLPPLTS+RRKEL+KVV+KLAEEGKVAVRNIRRDALK+YEKLEKEKKLS
Sbjct: 181 SPNNDGDVIRLSLPPLTSERRKELSKVVAKLAEEGKVAVRNIRRDALKAYEKLEKEKKLS 240

Query: 241 EDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           EDNVKDLSADLQK+TDEYMKKVE+IYKQK+QELMKV
Sbjct: 241 EDNVKDLSADLQKMTDEYMKKVETIYKQKDQELMKV 276
[Close]
BLAST of Spo22185.1 vs. NCBI nr
Match: gi|720000338|ref|XP_010255993.1| (PREDICTED: ribosome-recycling factor, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 349.4 bits (895), Expect = 5.800e-93
Identity = 192/275 (69.82%), Postives = 225/275 (81.82%), Query Frame = 1 

		  

Query: 3   ASSLSSATSYLHSFRRRNSCVSLQG-----VSDMECNIARTNVSVWRSSANYVRMDCGVK 62
           +S+ S  + Y       N+ ++LQG      S  +C    TNV+ W S+ANYV +  G +
Sbjct: 6   SSAASVRSLYQTKSHTTNASLTLQGSYCRETSCKKCLSTCTNVASWSSAANYVSLQVGTR 65

Query: 63  KFSGKAVVVK-QLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTN 122
           KFSGK +VVK   Q RAG  RCAT+EE+EAEKSLIE + KQRMEKTIET+R NFN+VRT 
Sbjct: 66  KFSGKPIVVKLSEQKRAGVLRCATIEEIEAEKSLIEKDVKQRMEKTIETVRGNFNAVRTG 125

Query: 123 RASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVS 182
           RA+P MLDR+EVEYYGTPVSLKSIAQISTPDASSLLI PYDKSSLK IEKAIV S LG++
Sbjct: 126 RANPAMLDRVEVEYYGTPVSLKSIAQISTPDASSLLIQPYDKSSLKVIEKAIVNSDLGLT 185

Query: 183 PNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSE 242
           PNNDGEVIRLS+P LTSDRRKEL K+V+K AEEGKVA+RNIRRDA+KSYEKLEKEKKLSE
Sbjct: 186 PNNDGEVIRLSVPQLTSDRRKELLKIVAKQAEEGKVALRNIRRDAIKSYEKLEKEKKLSE 245

Query: 243 DNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           DNVKDLS+DLQK+TDEYMKK++S+YKQKE+EL+ V
Sbjct: 246 DNVKDLSSDLQKVTDEYMKKIDSVYKQKEKELLTV 280
[Close]
BLAST of Spo22185.1 vs. NCBI nr
Match: gi|566156360|ref|XP_002302112.2| (Ribosome recycling factor family protein [Populus trichocarpa])

HSP 1 Score: 337.8 bits (865), Expect = 1.700e-89
Identity = 182/239 (76.15%), Postives = 215/239 (89.96%), Query Frame = 1 

		  

Query: 34  NIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQL-QNRAGTFRCATMEEVEAEKSLIE 93
           +I  T+VS+W SSANY  +  G  K SGK V VK+L QNR G  R AT+EE+EAEKSLIE
Sbjct: 48  SIGATSVSLWSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIE 107

Query: 94  TNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLL 153
            + K RMEKTI+T+R+NFNSVRT RA+P+MLD+IEVEYYGTPVSLKSIAQISTPDASSLL
Sbjct: 108 DDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 154 ISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKV 213
           + PYDKSSLKAIEKAIV+S LG++PNNDGEVIR+S+P LTS+RRKEL+K+V+KLAEEGKV
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 214 AVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+RNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTDEYMKK+++I+KQKE+EL+KV
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
[Close]
BLAST of Spo22185.1 vs. NCBI nr
Match: gi|743840305|ref|XP_011026168.1| (PREDICTED: ribosome-recycling factor, chloroplastic [Populus euphratica])

HSP 1 Score: 337.0 bits (863), Expect = 3.000e-89
Identity = 181/239 (75.73%), Postives = 214/239 (89.54%), Query Frame = 1 

		  

Query: 34  NIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQL-QNRAGTFRCATMEEVEAEKSLIE 93
           +I  T+VS+W SSANY  +  G  K SGK V  K+L QNR G  R AT+EE+EAEKSLIE
Sbjct: 48  SIGATSVSLWSSSANYSSLRNGSTKLSGKPVAAKRLLQNRRGVVRNATIEEIEAEKSLIE 107

Query: 94  TNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLL 153
            + K RMEKTI+T+R+NFNSVRT RA+P+MLD+IEVEYYGTPVSLKSIAQISTPDASSLL
Sbjct: 108 DDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 154 ISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKV 213
           + PYDKSSLKAIEKAIV+S LG++PNNDGEVIR+S+P LTS+RRKEL+K+V+KLAEEGKV
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 214 AVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+RNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTDEYMKK+++I+KQKE+EL+KV
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDNIFKQKEKELLKV 286
[Close]
BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXD4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_022080 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.400e-138
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60
           MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS
Sbjct: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60

Query: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120
           GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP
Sbjct: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120

Query: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180
           TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND
Sbjct: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180

Query: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240
           GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK
Sbjct: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240

Query: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           DLSADLQKLTDEYMKKVESIYKQKEQELMKV
Sbjct: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 271
[Close]
BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CMY2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g084210 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.100e-109
Identity = 217/276 (78.62%), Postives = 247/276 (89.49%), Query Frame = 1 

		  

Query: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECN-----IARTNVSVWRSSANYVRMDCG 60
           MA SSLSSAT YL +  R     SLQGVS++ECN     + RTNVS W S A+YVR++C 
Sbjct: 1   MATSSLSSATPYLQAIPRTKVSASLQGVSNVECNHLQHQVGRTNVSFWSSGASYVRLNCR 60

Query: 61  VKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRT 120
           V+KF  K+VVV   +NR GT +CAT+EE+EAEKS IE +TKQRMEKT+ET+RSNFNSVRT
Sbjct: 61  VQKFPVKSVVVNLSRNREGTIKCATIEEIEAEKSTIEKDTKQRMEKTLETVRSNFNSVRT 120

Query: 121 NRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGV 180
           NRASP+MLDR+EVEYYGTPVSLKSIAQ+S+PDASS+LISPYDKSSLKAIEKAIVTSQLG+
Sbjct: 121 NRASPSMLDRVEVEYYGTPVSLKSIAQVSSPDASSILISPYDKSSLKAIEKAIVTSQLGL 180

Query: 181 SPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLS 240
           SPNNDG+VIRLSLPPLTS+RRKEL+KVV+KLAEEGKVAVRNIRRDALK+YEKLEKEKKLS
Sbjct: 181 SPNNDGDVIRLSLPPLTSERRKELSKVVAKLAEEGKVAVRNIRRDALKAYEKLEKEKKLS 240

Query: 241 EDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           EDNVKDLSADLQK+TDEYMKKVE+IYKQK+QELMKV
Sbjct: 241 EDNVKDLSADLQKMTDEYMKKVETIYKQKDQELMKV 276
[Close]
BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Match: B9GSN2_POPTR (Ribosome recycling factor family protein OS=Populus trichocarpa GN=POPTR_0002s05330g PE=3 SV=2)

HSP 1 Score: 337.8 bits (865), Expect = 1.200e-89
Identity = 182/239 (76.15%), Postives = 215/239 (89.96%), Query Frame = 1 

		  

Query: 34  NIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQL-QNRAGTFRCATMEEVEAEKSLIE 93
           +I  T+VS+W SSANY  +  G  K SGK V VK+L QNR G  R AT+EE+EAEKSLIE
Sbjct: 48  SIGATSVSLWSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIE 107

Query: 94  TNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLL 153
            + K RMEKTI+T+R+NFNSVRT RA+P+MLD+IEVEYYGTPVSLKSIAQISTPDASSLL
Sbjct: 108 DDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 154 ISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKV 213
           + PYDKSSLKAIEKAIV+S LG++PNNDGEVIR+S+P LTS+RRKEL+K+V+KLAEEGKV
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 214 AVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+RNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTDEYMKK+++I+KQKE+EL+KV
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
[Close]
BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Match: A9PJM1_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.500e-89
Identity = 181/239 (75.73%), Postives = 214/239 (89.54%), Query Frame = 1 

		  

Query: 34  NIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQL-QNRAGTFRCATMEEVEAEKSLIE 93
           +I   +VS+W SSANY  +  G  K SGK V VK+L QNR G  R AT+EE+EAEKSLIE
Sbjct: 48  SIGAASVSLWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIE 107

Query: 94  TNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLL 153
            + K RMEKTI+T+R+NFNSVRT RA+P+MLD+IEVEYYGTPVSLKSIAQISTPDASSLL
Sbjct: 108 DDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 154 ISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKV 213
           + PYDKSSLKAIEKAIV+S LG++PNNDGEVIR+S+P LTS+RRKEL+K+V+KLAEEGKV
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 214 AVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+RNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTDEYMKK+++I+KQKE+EL+KV
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
[Close]
BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Match: A0A061DPN2_THECC (Ribosome recycling factor isoform 1 OS=Theobroma cacao GN=TCM_004363 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.600e-89
Identity = 179/246 (72.76%), Postives = 210/246 (85.37%), Query Frame = 1 

		  

Query: 26  QGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFSGKAVVVKQLQNRAGTFRCATMEEVE 85
           +G   ++C     NV  W S+ANY R+  G  K SGK  VV  L+ RAG  RCAT+EE+E
Sbjct: 34  KGFDCVKCRSTDVNVYSWSSAANYARLRHGASKLSGKPFVV--LRKRAGVLRCATIEEIE 93

Query: 86  AEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQIST 145
           AEKS IE + K RMEKTIET+R+NFNS+RT RA+P +LD++EVEYYGTPVSLKSIAQIST
Sbjct: 94  AEKSSIEKDAKARMEKTIETVRTNFNSIRTGRANPAILDKVEVEYYGTPVSLKSIAQIST 153

Query: 146 PDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSK 205
           PD+SSLL+ PYDKSSLKAIEKAIV S LG++PNNDGEVIRLSLP LT++RRKEL+KVV+K
Sbjct: 154 PDSSSLLVQPYDKSSLKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAK 213

Query: 206 LAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKE 265
            AEEGKVAVRNIRRDALK+YEKLEKEKKLSEDNVKDLS+DLQKLTDEYMKK++SI+KQKE
Sbjct: 214 QAEEGKVAVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIFKQKE 273

Query: 266 QELMKV 272
           +EL+ V
Sbjct: 274 KELLTV 277
[Close]
BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Match: RRFC_SPIOL (Ribosome-recycling factor, chloroplastic OS=Spinacia oleracea GN=RRF PE=1 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 2.200e-140
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60
           MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS
Sbjct: 1   MAASSLSSATSYLHSFRRRNSCVSLQGVSDMECNIARTNVSVWRSSANYVRMDCGVKKFS 60

Query: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120
           GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP
Sbjct: 61  GKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASP 120

Query: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180
           TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND
Sbjct: 121 TMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNND 180

Query: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240
           GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK
Sbjct: 181 GEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVK 240

Query: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           DLSADLQKLTDEYMKKVESIYKQKEQELMKV
Sbjct: 241 DLSADLQKLTDEYMKKVESIYKQKEQELMKV 271
[Close]
BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Match: RRFC_DAUCA (Ribosome-recycling factor, chloroplastic (Fragment) OS=Daucus carota GN=RRF PE=2 SV=2)

HSP 1 Score: 317.0 bits (811), Expect = 2.000e-85
Identity = 164/229 (71.62%), Postives = 203/229 (88.65%), Query Frame = 1 

		  

Query: 43  WRSSANYVRMDCGVKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKT 102
           W ++ANYV++  G  KF+ K VV+ Q   R GT +CATMEE+EAEKSLIE + K+RMEKT
Sbjct: 1   WTAAANYVKIKVGTGKFARKTVVLSQ--KRTGTLKCATMEEIEAEKSLIEKSVKERMEKT 60

Query: 103 IETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLK 162
           IE ++++FNS+RT R++P MLD+I+VEYYGTP SLKSIAQISTPD+SSLL++PYDKSSLK
Sbjct: 61  IENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLK 120

Query: 163 AIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDAL 222
            IEKAIV S LG++PNNDG+VIRLS+P LT+DRRKEL+K+V+K AEEGKVA+RNIRRDA+
Sbjct: 121 DIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDAI 180

Query: 223 KSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           KSY+KLEKEKKLSEDNVKDLS+DLQK+ DEY+KKV+SI+KQKE+ELM V
Sbjct: 181 KSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 227
[Close]
BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Match: RRFC_ORYSI (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_26546 PE=1 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 7.800e-82
Identity = 160/231 (69.26%), Postives = 199/231 (86.15%), Query Frame = 1 

		  

Query: 41  SVWRSSANYVRMDCGVKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRME 100
           ++  SS N++ +  G  +F  + ++++    RA   R AT+EE+EAEKS+IE   ++RME
Sbjct: 37  NILSSSTNFMSLRAGPMRFYSRPLILQNSDKRA-VLRHATIEEIEAEKSVIEDQARERME 96

Query: 101 KTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSS 160
           K IET+++NFN+VRT RA+P MLDRIEVEYYGTPV+LKSIAQI+TPDA+SLLI PYDKSS
Sbjct: 97  KAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSS 156

Query: 161 LKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRD 220
           LK IEK IV + LGV+P+NDGEVIR+++PPLTSDRRKELAK V+KLAEEGKVA+RNIRRD
Sbjct: 157 LKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAIRNIRRD 216

Query: 221 ALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+K+Y+KLEKEKKLSEDNVKDLSADLQK+TDEYMKK+E+I KQKEQELMK+
Sbjct: 217 AIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQELMKI 266
[Close]
BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Match: RRFC_ORYSJ (Ribosome-recycling factor, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0570700 PE=2 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 7.800e-82
Identity = 160/231 (69.26%), Postives = 199/231 (86.15%), Query Frame = 1 

		  

Query: 41  SVWRSSANYVRMDCGVKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRME 100
           ++  SS N++ +  G  +F  + ++++    RA   R AT+EE+EAEKS+IE   ++RME
Sbjct: 37  NILSSSTNFMSLRAGPMRFYSRPLILQNSDKRA-VLRHATIEEIEAEKSVIEDQARERME 96

Query: 101 KTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSS 160
           K IET+++NFN+VRT RA+P MLDRIEVEYYGTPV+LKSIAQI+TPDA+SLLI PYDKSS
Sbjct: 97  KAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSS 156

Query: 161 LKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRD 220
           LK IEK IV + LGV+P+NDGEVIR+++PPLTSDRRKELAK V+KLAEEGKVA+RNIRRD
Sbjct: 157 LKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAIRNIRRD 216

Query: 221 ALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           A+K+Y+KLEKEKKLSEDNVKDLSADLQK+TDEYMKK+E+I KQKEQELMK+
Sbjct: 217 AIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQELMKI 266
[Close]
BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Match: RRFC_ARATH (Ribosome-recycling factor, chloroplastic OS=Arabidopsis thaliana GN=RRF PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 1.500e-80
Identity = 163/212 (76.89%), Postives = 188/212 (88.68%), Query Frame = 1 

		  

Query: 60  SGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRAS 119
           SG  VV + LQ R    R AT+EE+EAEKS IET+ K +MEKTIET+R++FNS+RT R++
Sbjct: 65  SGGPVVKRSLQKRL-VIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTGRSN 124

Query: 120 PTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNN 179
             MLD+IEVEYYG+PVSLKSIAQISTPD SSLL+ PYDKSSLKAIEKAIV S LGV+PNN
Sbjct: 125 AAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNN 184

Query: 180 DGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNV 239
           DG+VIRLSLPPLTSDRRKEL+KVV+K +EEGKVA+RNIRRDALKSY+KLEKEKKLSEDNV
Sbjct: 185 DGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNV 244

Query: 240 KDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           KDLS+DLQKL D YMKK+E +YKQKE+ELMKV
Sbjct: 245 KDLSSDLQKLIDVYMKKIEELYKQKEKELMKV 275
[Close]
BLAST of Spo22185.1 vs. TAIR (Arabidopsis)
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor)

HSP 1 Score: 300.8 bits (769), Expect = 8.300e-82
Identity = 163/212 (76.89%), Postives = 188/212 (88.68%), Query Frame = 1 

		  

Query: 60  SGKAVVVKQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRAS 119
           SG  VV + LQ R    R AT+EE+EAEKS IET+ K +MEKTIET+R++FNS+RT R++
Sbjct: 65  SGGPVVKRSLQKRL-VIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTGRSN 124

Query: 120 PTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNN 179
             MLD+IEVEYYG+PVSLKSIAQISTPD SSLL+ PYDKSSLKAIEKAIV S LGV+PNN
Sbjct: 125 AAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNN 184

Query: 180 DGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNV 239
           DG+VIRLSLPPLTSDRRKEL+KVV+K +EEGKVA+RNIRRDALKSY+KLEKEKKLSEDNV
Sbjct: 185 DGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNV 244

Query: 240 KDLSADLQKLTDEYMKKVESIYKQKEQELMKV 272
           KDLS+DLQKL D YMKK+E +YKQKE+ELMKV
Sbjct: 245 KDLSSDLQKLIDVYMKKIEELYKQKEKELMKV 275
[Close]
BLAST of Spo22185.1 vs. TAIR (Arabidopsis)
Match: AT3G01800.1 (Ribosome recycling factor)

HSP 1 Score: 103.2 bits (256), Expect = 2.500e-22
Identity = 62/178 (34.83%), Postives = 105/178 (58.99%), Query Frame = 1 

		  

Query: 91  IETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASS 150
           ++     +ME  I+ +  +   +RT RA+P MLD I VE  G  + L  +A +S  D  +
Sbjct: 89  VKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKT 148

Query: 151 LLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEG 210
           L ++PYD  ++K +EKAIV S LG++P  DG+ +  S+P LT +  + + K+V+K +E  
Sbjct: 149 LSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVV 208

Query: 211 KVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQEL 269
           K ++R  R+ AL + +K      L +D VK L  ++ +LT +++K  E + K KE+E+
Sbjct: 209 KQSIRRARQKALDTIKK--AGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 264
The following BLAST results are available for this feature:
BLAST of Spo22185.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|7388105|sp|P82231.1|RRFC_SPIOL3.5e-138100.RecName: Full=Ribosome-recycli... [more]
gi|731328647|ref|XP_010675165.1|4.4e-10978.6PREDICTED: ribosome-recycling ... [more]
gi|720000338|ref|XP_010255993.1|5.8e-9369.8PREDICTED: ribosome-recycling ... [more]
gi|566156360|ref|XP_002302112.2|1.7e-8976.1Ribosome recycling factor fami... [more]
gi|743840305|ref|XP_011026168.1|3.0e-8975.7PREDICTED: ribosome-recycling ... [more]
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BLAST of Spo22185.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RXD4_SPIOL2.4e-138100.Uncharacterized protein OS=Spi... [more]
A0A0J8CMY2_BETVU3.1e-10978.6Uncharacterized protein OS=Bet... [more]
B9GSN2_POPTR1.2e-8976.1Ribosome recycling factor fami... [more]
A9PJM1_9ROSI3.5e-8975.7Putative uncharacterized prote... [more]
A0A061DPN2_THECC4.6e-8972.7Ribosome recycling factor isof... [more]
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BLAST of Spo22185.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RRFC_SPIOL2.2e-140100.Ribosome-recycling factor, chl... [more]
RRFC_DAUCA2.0e-8571.6Ribosome-recycling factor, chl... [more]
RRFC_ORYSI7.8e-8269.2Ribosome-recycling factor, chl... [more]
RRFC_ORYSJ7.8e-8269.2Ribosome-recycling factor, chl... [more]
RRFC_ARATH1.5e-8076.8Ribosome-recycling factor, chl... [more]
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BLAST of Spo22185.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G63190.18.3e-8276.8ribosome recycling factor, chl... [more]
AT3G01800.12.5e-2234.8Ribosome recycling factor[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002661Ribosome recycling factorHAMAPMF_00040RRFcoord: 89..271
score: 25
IPR002661Ribosome recycling factorPANTHERPTHR20982RIBOSOME RECYCLING FACTORcoord: 76..271
score: 1.1E
IPR002661Ribosome recycling factorTIGRFAMsTIGR00496TIGR00496coord: 96..271
score: 4.1
IPR023584Ribosome recycling factor domainGENE3D1.10.132.20coord: 152..271
score: 4.1
IPR023584Ribosome recycling factor domainPFAMPF01765RRFcoord: 108..269
score: 6.7
IPR023584Ribosome recycling factor domainunknownSSF55194Ribosome recycling factor, RRFcoord: 91..270
score: 3.27
NoneNo IPR availableunknownCoilCoilcoord: 218..252
scor
NoneNo IPR availablePANTHERPTHR20982:SF8RIBOSOME-RECYCLING FACTOR, CHLOROPLASTICcoord: 76..271
score: 1.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0045694 regulation of embryo sac egg cell differentiation
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0009561 megagametogenesis
biological_process GO:0009902 chloroplast relocation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009845 seed germination
biological_process GO:0010162 seed dormancy process
biological_process GO:0050826 response to freezing
biological_process GO:0009909 regulation of flower development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0000338 protein deneddylation
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0006312 mitotic recombination
biological_process GO:0009933 meristem structural organization
biological_process GO:0010074 maintenance of meristem identity
biological_process GO:0019915 lipid storage
biological_process GO:0000741 karyogamy
biological_process GO:0016571 histone methylation
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042793 plastid transcription
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006547 histidine metabolic process
biological_process GO:0070681 glutaminyl-tRNAGln biosynthesis via transamidation
biological_process GO:0006560 proline metabolic process
biological_process GO:0006420 arginyl-tRNA aminoacylation
biological_process GO:0006525 arginine metabolic process
biological_process GO:0006812 cation transport
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006432 phenylalanyl-tRNA aminoacylation
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0052889 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene
biological_process GO:0032543 mitochondrial translation
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0019048 modulation by virus of host morphology or physiology
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0048255 mRNA stabilization
biological_process GO:0016556 mRNA modification
biological_process GO:0006412 translation
biological_process GO:0009657 plastid organization
biological_process GO:0006427 histidyl-tRNA aminoacylation
biological_process GO:0016579 protein deubiquitination
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0019408 dolichol biosynthetic process
biological_process GO:0009790 embryo development
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0032544 plastid translation
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0046339 diacylglycerol metabolic process
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0015979 photosynthesis
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0046034 ATP metabolic process
biological_process GO:0009817 defense response to fungus, incompatible interaction
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0000304 response to singlet oxygen
biological_process GO:0009416 response to light stimulus
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0046939 nucleotide phosphorylation
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0030956 glutamyl-tRNA(Gln) amidotransferase complex
cellular_component GO:0009536 plastid
cellular_component GO:0009579 thylakoid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0009328 phenylalanine-tRNA ligase complex
cellular_component GO:0009509 chromoplast
cellular_component GO:0005634 nucleus
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005840 ribosome
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005829 cytosol
molecular_function GO:0016719 carotene 7,8-desaturase activity
molecular_function GO:0004826 phenylalanine-tRNA ligase activity
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0000049 tRNA binding
molecular_function GO:0052886 9,9'-dicis-carotene:quinone oxidoreductase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0043167 ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0052887 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity
molecular_function GO:0019905 syntaxin binding
molecular_function GO:0004821 histidine-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004814 arginine-tRNA ligase activity
RNA-Seq Expression