Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGAAGAAAGAGGAAAGAGAAAGCTGAACTGATAAGAGTTTCAGACATTGTTAAACCTGCAACATTTTTTTCTGGGTTCTGTTATAACTTAAAAACTGGTGAATTTCTTTTAGGTAGGGTACTAAAAAAAAAAACTTTGTTTGACATTTTTTTTGCTTTTTTGTCATTTCAACTTGAATTCATTTGGTTCTTAAAGTTAGCAAAAAAGTAAATGCTAGTACTACATTTTTTGCATTAAATTTTTTTTTCCATAAAATTTCCCACTATTTTTTGGGTCACATAATTTGATTTTTAGTGCTTTTTTACAGTCTTTTTAGGTAGGTTTTGAGCAATAATTATAGTGGATATGCATGTGGGTTTGTTCCCTTCTAGTCAAGTCGGTGTCCTTTTTGATGTTCATTTTCTGGGTACTAAAATTTCTGGGTTTTTGATTTAATGTTCTTCAAATTGTTCAAACTATTTTACTGGATTTCTCAAAAAGGAATAGTTTGGATCTGGGGTTTGTTTAGATTTCGCAATCTTCACTAACTTTTTACTGTATTGATTGTGTTTCTTAGTGAATATTACTGAGGAGTGAGAAGAAGTGATGGCCGGAGGTGCAGCACCAGCTAAGGCGGACGAGCCAGCGCCGCACCCGCCGAAAGATCAGCTCCCTAGTGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCGTGAGTCTCTCTCCTCACCTCTTTTCTTTGTTTATATTTCTATTTTTGGGTTACATTTTCTTATTTAGTGTTTCTAATTTTAGTTAATTGTAACGAGTATACTCTACATACTAATGTGAGATAGTATTGTTATATAGTATGCAATTGGAGTTGAGTGAACTGTGAAGGTGTTTTATGGTAGTGATTATGGACTTTATTTAGTGTTCTTATTTTTTTTTTGTTTATTTTTAGCTTTGGTGGGTTAGCCTGTTCATTTATTTAAGTTAATTCAATTAATTGTATCTATGCTAAAAAAGGAATTCAATTTCTGCCCCTCTTAAATCTAATTATTAATTTAGAAAATGTCGGTGAAGAGTCTAAATTATGTTTGCTTTTATTGGAAGAAGATGATTTTTTTGGCATTATTGACATCCTTTGTTTTATTGTAAAGAGTATTAGTGTTTAGAATCACTTGTAGGATTTACCGTCACCTTGGCGTCCGAAAACCACTTTCAAACCCTTGCCTTATCGTCTTATCGACTTTACTTGGTTGATGACATGCATAGTATAACAGGAATATTAAGGTCCTCATGGTGGACCGGTGTACCATACTCTTTCAAGGATTTCTCCGTTTTGTTTTCAGAATCATATCCGAGCAAGGAGTATGATACTAGTGGTGAACATGAGAATTCCCCTAAGTGTCGTTTTAATATTTCCGGGTGATAGTTTTATCAAGTATTTACCCTTCTCAAAAATGTGTTAAATCTTTGGTCTTTGGAATTTGGAGTGAGGTTTATCCATCACCAATTATCTCATTGTTTCTGTTAAGGATTGTTTTCAAAGATTGTTGCAACCTTCCATTGCATGTCGGTTAAAAATGTACTTCCACTGATGTTCAACTAGTGAAGTATTGATTTTTTTCCCTTTCTTTTGCAGCTGAGGCCATCCTTCTTGGTTTCCAGCATTACATTGTGATGCTTGGCACAACTGTTCTCATCCCCAGTGCTCTTGTACCCCAGATGGGAGGAGGAAAGGTAGGTTATGCGGATGAATTTAATGATACATTGAAATGATGTTCTGGATAAGACTTACTTTTCGACTGCTGACAATTTTGAGTGTTTAATGTCTAACTATTGTTTACATTTACATCTTTCAATAGCAAGAGAAAGCAGAAGTTATTCAGACATTGCTTTTTGTTGCTGGTTTGAACACTCTACTTCAGACAACATTCGGGACTCGATTGCCAGCTGTGATTGGAGCATCTTACACCTTTGTTGCACCAACTATTTCCATAATCTTGGCTGGTCGATACAGTCAAGAACAAGATCCTATAAGAGTATGTGCCTAAAAACCCGTTTTATGTGATTGTAGTGTATGTGATTGATAATTGGTACTTCCAAGTCTGATGAAGCAAAATGAGGATTCAGGCAACTCTCAATTGTCATGTTAGATGACAGTTTTAGTTTATTTGTATGTTTCTGCATATTCAACATACACTCACACACAGTACAATAGTATTTGAGGTATACACCAAAGTCATCAAACAATCACGCTTAAGGAAACAACTTGCGTTATTATGTACGATGTCACCTGTCATGCCCCTTCAGTATGAGCAAGAGGTTGACTGATGCTCAGACTAGAGTAAGCAGCAAGCACAGACAGGATTATGCAATATATATGATGTTGCGAACTTGGCCATCGCCATTTCATATTTTAGGTGTTTGGTTTGTATTTCAAGCTTAATATGTTTGGTGTGTATTAAGTATGATGCTTTTTATATTGCCAACAAAAGTATTTTTGTGTAACTGAGATTTTCAGTGAAATAAAAATCGAAGTCTGAAAGATGGGATTTATGAAATTTAAGTTCAAGTGTTTAACTACATCTTAGAGCTACAGTAGGAAAGCTAAATGCTGAAAAATCAACCAAGCCATTGACTGTTTCACTTATAACTTTCTTATATCTCAACAGAAATTCAAGAGTATAATGCGGGGAATACAAGGGGCATTGATTGTTGCTTCAGTCCTTCAAATTGTCCTTGGCTTCAGTGGTCTTTGGCGTAACGTCACAAGGTCAGTTTGTGGTTAATGTGTTGGTGCTTATCATTGACCATATCAACTCTAATATATAGTTGTAGGTTTACCCTGATCACGGGGTTTGTATTTTGACTTAGATTTTTGAAGATTTAGGTGTTACTCTCATGTCCAGTGTCGTAAATTACTGCTGTATGTATTTCCTTGTATATACAGCACTTTGCTTAATTTGTGTTTAGTAACTGATACTAGTGCACTTATTCTGGAAGTTGAAGTTACCATTAGACTTTGATATACTAATATAGAAGTATCTTAACTAACGAAGGAATAATAACAAGCTTTCTTTTTGTTGCAAACCCTCACAGTTGAAGAACATGGGAGACTTTATACTTTTAAAGTGGAACACACATGATTATTTATTTTGTAATTTGATGAAACCCTAGCCTCTCTAATTCTTTCGTTATTAAAAAAATATATTAGTGGTCTATACTGTGGTAAACCTTCATCTTTGTTAATAGTTTCAGGTGATGTAATATTCCGAATGTCCTAGTTCTACCCTTCGCTTATTGCAGCATTAATGTGTTACTTGTTCACTTACCGGCTTGTCTTCTTGATTCTGATAAAGGCATACTTGATGGCACTGTTTACATGTAA GAAGGAAGAAAGAGGAAAGAGAAAGCTGAACTGATAAGAGTTTCAGACATTGTTAAACCTGCAACATTTTTTTCTGGGTTCTGTTATAACTTAAAAACTGGTGAATTTCTTTTAGAAGAAGTGATGGCCGGAGGTGCAGCACCAGCTAAGGCGGACGAGCCAGCGCCGCACCCGCCGAAAGATCAGCTCCCTAGTGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATCCTTCTTGGTTTCCAGCATTACATTGTGATGCTTGGCACAACTGTTCTCATCCCCAGTGCTCTTGTACCCCAGATGGGAGGAGGAAAGCAAGAGAAAGCAGAAGTTATTCAGACATTGCTTTTTGTTGCTGGTTTGAACACTCTACTTCAGACAACATTCGGGACTCGATTGCCAGCTGTGATTGGAGCATCTTACACCTTTGTTGCACCAACTATTTCCATAATCTTGGCTGGTCGATACAGTCAAGAACAAGATCCTATAAGAAAATTCAAGAGTATAATGCGGGGAATACAAGGGGCATTGATTGTTGCTTCAGTCCTTCAAATTGTCCTTGGCTTCAGTGGTCTTTGGCGTAACGTCACAAGCATTAATGTGTTACTTGTTCACTTACCGGCTTGTCTTCTTGATTCTGATAAAGGCATACTTGATGGCACTGTTTACATGTAA GAAGGAAGAAAGAGGAAAGAGAAAGCTGAACTGATAAGAGTTTCAGACATTGTTAAACCTGCAACATTTTTTTCTGGGTTCTGTTATAACTTAAAAACTGGTGAATTTCTTTTAGAAGAAGTGATGGCCGGAGGTGCAGCACCAGCTAAGGCGGACGAGCCAGCGCCGCACCCGCCGAAAGATCAGCTCCCTAGTGTTTCTTACTGCATTACTAGTCCTCCTCCATGGCCTGAGGCCATCCTTCTTGGTTTCCAGCATTACATTGTGATGCTTGGCACAACTGTTCTCATCCCCAGTGCTCTTGTACCCCAGATGGGAGGAGGAAAGCAAGAGAAAGCAGAAGTTATTCAGACATTGCTTTTTGTTGCTGGTTTGAACACTCTACTTCAGACAACATTCGGGACTCGATTGCCAGCTGTGATTGGAGCATCTTACACCTTTGTTGCACCAACTATTTCCATAATCTTGGCTGGTCGATACAGTCAAGAACAAGATCCTATAAGAAAATTCAAGAGTATAATGCGGGGAATACAAGGGGCATTGATTGTTGCTTCAGTCCTTCAAATTGTCCTTGGCTTCAGTGGTCTTTGGCGTAACGTCACAAGCATTAATGTGTTACTTGTTCACTTACCGGCTTGTCTTCTTGATTCTGATAAAGGCATACTTGATGGCACTGTTTACATGTAA EGRKRKEKAELIRVSDIVKPATFFSGFCYNLKTGEFLLEEVMAGGAAPAKADEPAPHPPKDQLPSVSYCITSPPPWPEAILLGFQHYIVMLGTTVLIPSALVPQMGGGKQEKAEVIQTLLFVAGLNTLLQTTFGTRLPAVIGASYTFVAPTISIILAGRYSQEQDPIRKFKSIMRGIQGALIVASVLQIVLGFSGLWRNVTSINVLLVHLPACLLDSDKGILDGTVYM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22215.1 vs. NCBI nr
Match: gi|902187074|gb|KNA10840.1| (hypothetical protein SOVF_140260 [Spinacia oleracea]) HSP 1 Score: 314.3 bits (804), Expect = 1.700e-82 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo22215.1 vs. NCBI nr
Match: gi|731335400|ref|XP_010678709.1| (PREDICTED: nucleobase-ascorbate transporter 6 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 298.9 bits (764), Expect = 7.600e-78 Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 1
BLAST of Spo22215.1 vs. NCBI nr
Match: gi|955316852|ref|XP_014630261.1| (PREDICTED: nucleobase-ascorbate transporter 6-like isoform X2 [Glycine max]) HSP 1 Score: 273.9 bits (699), Expect = 2.600e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. NCBI nr
Match: gi|356516694|ref|XP_003527028.1| (PREDICTED: nucleobase-ascorbate transporter 6 [Glycine max]) HSP 1 Score: 273.9 bits (699), Expect = 2.600e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. NCBI nr
Match: gi|356508649|ref|XP_003523067.1| (PREDICTED: nucleobase-ascorbate transporter 6-like isoform X1 [Glycine max]) HSP 1 Score: 273.9 bits (699), Expect = 2.600e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUB3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_140260 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.200e-82 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEX0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116470 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 5.300e-78 Identity = 152/160 (95.00%), Postives = 154/160 (96.25%), Query Frame = 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QHV2_GLYSO (Nucleobase-ascorbate transporter 6 OS=Glycine soja GN=glysoja_012247 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.800e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Match: A0A0B2Q8P6_GLYSO (Nucleobase-ascorbate transporter 6 OS=Glycine soja GN=glysoja_030284 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.800e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Match: I1JX45_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G180000 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.800e-70 Identity = 136/159 (85.53%), Postives = 144/159 (90.57%), Query Frame = 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2) HSP 1 Score: 260.8 bits (665), Expect = 1.400e-68 Identity = 129/160 (80.62%), Postives = 145/160 (90.62%), Query Frame = 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 6.200e-64 Identity = 118/155 (76.13%), Postives = 136/155 (87.74%), Query Frame = 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2) HSP 1 Score: 243.4 bits (620), Expect = 2.400e-63 Identity = 126/172 (73.26%), Postives = 141/172 (81.98%), Query Frame = 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.800e-53 Identity = 100/154 (64.94%), Postives = 127/154 (82.47%), Query Frame = 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2) HSP 1 Score: 184.5 bits (467), Expect = 1.300e-45 Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Match: AT5G62890.1 (Xanthine/uracil permease family protein) HSP 1 Score: 260.8 bits (665), Expect = 8.000e-70 Identity = 129/160 (80.62%), Postives = 145/160 (90.62%), Query Frame = 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Match: AT5G49990.1 (Xanthine/uracil permease family protein) HSP 1 Score: 245.4 bits (625), Expect = 3.500e-65 Identity = 118/155 (76.13%), Postives = 136/155 (87.74%), Query Frame = 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Match: AT1G60030.1 (nucleobase-ascorbate transporter 7) HSP 1 Score: 243.4 bits (620), Expect = 1.300e-64 Identity = 126/172 (73.26%), Postives = 141/172 (81.98%), Query Frame = 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Match: AT1G10540.1 (nucleobase-ascorbate transporter 8) HSP 1 Score: 209.5 bits (532), Expect = 2.100e-54 Identity = 100/154 (64.94%), Postives = 127/154 (82.47%), Query Frame = 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Match: AT1G49960.1 (Xanthine/uracil permease family protein) HSP 1 Score: 184.5 bits (467), Expect = 7.300e-47 Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22215.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo22215.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo22215.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo22215.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|