Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATACTACTATTAATAATATTATCATTGTTACAAATGGTGAAAACCCCAAAATTATTGAGGGTGCTAATGAACAGGAGACCAACTCTGAAGAACAAGGTGTAGCACAAATTGGAGGTAAACCCAATTTAAATTTTGATTTTGTATAAAAATTAGGGAATTCTTCTTAATTTTGGAATTCTTCATGATATTCAAGCATTACCCAGTTCCAAAGTTTTGATATTTTTTGTTCCTCTTTCATTTTTCCATATGAAATTTGATAATTGATAATGTGAGTGAAGATGTAGTGTGTTGATTGTTAAATTCATGAAGTGGGTATTGTCTGTTTCTTTCAATTTTCTGTGAATTTGCAGAAAAAATGCTGTGATTATTATCTTCAAGCTAAAATTAATTCATTAATTTCAGTCATAAATATTAGTTTTTTGCACTGGCTGGATTCATATTGTGTTTCTTGATTAGTTTGGTTTTGATTTTTGTACAGCTGAACTGAGCATAAATGTGTAATATTCTGGAAATCAGAATTTATTGAATTTTTATGCTGTTTATTATAAATATTGGCAAAAAAATTGGGAATTAGGGTTCTGTTTTGGGAAGATGTTTGTGATTGATTATTGTCTGTACTCTGCAGACACCAATGGATTTACTGTTCATCAAATTGGGATTGGTGCTTATAAGGAAATCGATATCGAATCAGATGCTTCTACTTTTAAGGGTCCAGAAACTTCTGTTGGCATCCAAGTTGTAATGGATGATACCTCAAATGTTGACAATGCCGCGTTATCTGAGATGCATAATGGTGATAACATAGTGATCAAAACCCTGGTTATAAATGTTCAGAATATTCAAAATCAAGTAGTTGTAACAGAACAGACTCAAGAAGTGGAACCAGAGATAGTTGAAAATGCTATTAAGAAGCTGATACAAAATCAGGAAACACACGACTTGTTTTGTCGTAATTGTAAGTCATGTGTTACCAAAAGAGTCATTCTCAAAAGAAGCTTGAAACATGGTGAGTCCACATTCTCATATATGTATATGATTATTCCACAGCTATCTTGCCTTAATTCAAACCTGTAAATGTAAAACACACCTTATTTCGGACAATATTGACTTAAAGAACTAAAATAATGCAGGAGATGTGATCGTGCCAATTCCTGATGAAACTCATGTTGATACTGGACCTGATATAATGAAAGCCATTGTCTATGGTGGTCTCTGGGAATGCATCACTAGCCTAAGTGTCATAAGTTCTGCAGCAGGTGTAGATGCCACCACGTGTGAGTTTTGACAGTTTTCTGCCTCAAACCTTCTTAGTATTGCATTCTACTGTTGTTATTTATGCACCAATCAGCTTCAGAAATACAACCGTTGAATGAGATGTACATGTATGAAGCTATATACAATTGTTTGGTGTTTCACATCAAATCATGACTTTTATATCATTATCTTAATAGACGAAAGTAACTGCAGATATTATTTGTCAGAAGTTTTACAATATGATACAGCATAGTTCCTGATCTTAGGCGAACAATCTGTTTTCTTTGCCAGTTATTTTTGTAATACAATATGTTTTCTTCGCCAGTTATACCAACCCCTTCCCCCCTTCTTCCAATCAATGTTGACATGGCTCCTTGTTACTTAGAACTTGAAAGTTGAAAGTAGCAGTATTTTTCTGTCTATTTTGTCCATTTGGTCATAGCCGAATGCTGCTCCACCATCATAACCTCTCTGTATGTTGTTTGCAGTGAATATTGTAGCTTTGGGACTTGCAAACGTCTTTGGAGGACTTGTTCTTCTTCTTCGTAATGTAAGTGCTACTTCAGCTTAATAATGTACTATTACCAGTATGATTTCAACTTTTTGAAAAGTATACATCTATACGAGTATAATAAAGTCAACATTTATTAATCAGGCCATCACCTTTTAGTTAGAAGTTTGGCTCTCAGGTTGTTGTAAATTCTCTTTTGGTCCTGAATCCTTAGTTTAAGTCCTAATCTAACATTTTCTCAGATATATATTTGGCAAAAAAATGCTGAAGGTTGGATATGCTAATACAGTAACAAATTGTTAGCATGAATTTGCCAGAAAAAAAAAAATTGTAGGAAAAAAAGGAATGTAGAATTACTGAGAATATATGGTATTATGGTTATAATGCAGGGGTGAATTAGACCTGATCAAACTGTGTGTCGGGTTTGGGCCGGGCCATGCTTAAAAATTCTGCCCATTGTGACGGGCCGGGCCAAACTTTGGGGTCGAAATTTATGCCCAAAAGGCCAAAATCCTCTGATTCAAGCCAAAATATCGGGCTTTTCAGGCCTGGCCAAATTTATAACTAAAAATGCAATTATGAGTTGTCCAAAACCCACCAAAAAAATTTAAAAATCAGGCCTGAAATTTCTGCCCAAACCCACTTCTCGGGCCGGGCCAGCGGCTGTGCTCATGATGATCAGGTCTAGGGTGAATTTTTATGTCAAAAATTCTAGATCTCCATTTCAGATGACATTATGATTACATAGTCACTCCTTCCTGACTTCACCATGCAGCTTAGGTTACTGAAACATGAGCAAGCAACGGCGAGTTATGAAGATCAACTGGGGAGGCCAGGGCACTTTCTGCTGCATGCAGTTGTTACCGTAATATCCTACCTTATATTCGGCCTTATATCTCCTATCATCTACGGCTTTGCCTTTCGCAAGAGTGACAACAAGGACTACAAACTCGGGATAGTTGCAGCTGCTTCGCTGGTGTGCATCATTTTTCTGTCTATTGTAAAGGCAAACGTCCAAAGGCCTAAAAAGCCATACATACAAACTATACTGTCTTACATCAGTGTGGGATTCATGATATCAGGGGCTGGATATGTTGCTGGTTATCTCATAAACATGTTACTCAAGAAGCTTGGTATATTTGACCCTAGGGCTCCCGTTACTATGTATGTGCCTGAAGCAGTAGCCATGGAGGTGGCCTGGTCATCTTATTGATCGTTGTTCATATTCTGAGTTTTCTTTTTTTTTATTTCGGTGGCAGGGTGAGGGAAATGCGAAATGTATTTGCTCAAGTTATGAGGCCGAATATAAGGTATGATATCACTGCAATGGTGTAGAACAGGAGGTAGAAATGAGAGAGAAAAGACAGAATTTCAGAGAGAAGAGAGAGAGAGAGAGAGAGAATTTCAGAAGAGGGAAATGAAATTATGTATTAATGTTTTGATAAGAAATAGTACAAGCTATGATTCAGCTTATTTATACAACAAAAGCTAAACAGACAATCAGATTCTTAATCCTAACTCCCAACAGAAAACTAACTTTGTTAACAACCTAACATTCCTCCCCTAACACTTTGATCTTTCCATTATGCCTTCTTCCGCTGGCCCTGAAGAACCATTT ATGGAAAATACTACTATTAATAATATTATCATTGTTACAAATGGTGAAAACCCCAAAATTATTGAGGGTGCTAATGAACAGGAGACCAACTCTGAAGAACAAGGTGTAGCACAAATTGGAGACACCAATGGATTTACTGTTCATCAAATTGGGATTGGTGCTTATAAGGAAATCGATATCGAATCAGATGCTTCTACTTTTAAGGGTCCAGAAACTTCTGTTGGCATCCAAGTTGTAATGGATGATACCTCAAATGTTGACAATGCCGCGTTATCTGAGATGCATAATGGTGATAACATAGTGATCAAAACCCTGGTTATAAATGTTCAGAATATTCAAAATCAAGTAGTTGTAACAGAACAGACTCAAGAAGTGGAACCAGAGATAGTTGAAAATGCTATTAAGAAGCTGATACAAAATCAGGAAACACACGACTTGTTTTGTCGTAATTGTAAGTCATGTGTTACCAAAAGAGTCATTCTCAAAAGAAGCTTGAAACATGGAGATGTGATCGTGCCAATTCCTGATGAAACTCATGTTGATACTGGACCTGATATAATGAAAGCCATTGTCTATGGTGGTCTCTGGGAATGCATCACTAGCCTAAGTGTCATAAGTTCTGCAGCAGGTGTAGATGCCACCACGTTGAATATTGTAGCTTTGGGACTTGCAAACGTCTTTGGAGGACTTGTTCTTCTTCTTCGTAATCTTAGGTTACTGAAACATGAGCAAGCAACGGCGAGTTATGAAGATCAACTGGGGAGGCCAGGGCACTTTCTGCTGCATGCAGTTGTTACCGTAATATCCTACCTTATATTCGGCCTTATATCTCCTATCATCTACGGCTTTGCCTTTCGCAAGAGTGACAACAAGGACTACAAACTCGGGATAGTTGCAGCTGCTTCGCTGGTGTGCATCATTTTTCTGTCTATTGTAAAGGCAAACGTCCAAAGGCCTAAAAAGCCATACATACAAACTATACTGTCTTACATCAGTGTGGGATTCATGATATCAGGGGCTGGATATGTTGCTGGTTATCTCATAAACATGTTACTCAAGAAGCTTGGTATATTTGACCCTAGGGCTCCCGTTACTATGTATGTGCCTGAAGCAGTAGCCATGGAGGTGGCCTGGTCATCTTATTGATCGTTGTTCATATTCTGAGTTTTCTTTTTTTTTATTTCGGTGGCAGGGTGAGGGAAATGCGAAATGTATTTGCTCAAGTTATGAGGCCGAATATAAGGTATGATATCACTGCAATGGTGTAGAACAGGAGGTAGAAATGAGAGAGAAAAGACAGAATTTCAGAGAGAAGAGAGAGAGAGAGAGAGAGAATTTCAGAAGAGGGAAATGAAATTATGTATTAATGTTTTGATAAGAAATAGTACAAGCTATGATTCAGCTTATTTATACAACAAAAGCTAAACAGACAATCAGATTCTTAATCCTAACTCCCAACAGAAAACTAACTTTGTTAACAACCTAACATTCCTCCCCTAACACTTTGATCTTTCCATTATGCCTTCTTCCGCTGGCCCTGAAGAACCATTT ATGGAAAATACTACTATTAATAATATTATCATTGTTACAAATGGTGAAAACCCCAAAATTATTGAGGGTGCTAATGAACAGGAGACCAACTCTGAAGAACAAGGTGTAGCACAAATTGGAGACACCAATGGATTTACTGTTCATCAAATTGGGATTGGTGCTTATAAGGAAATCGATATCGAATCAGATGCTTCTACTTTTAAGGGTCCAGAAACTTCTGTTGGCATCCAAGTTGTAATGGATGATACCTCAAATGTTGACAATGCCGCGTTATCTGAGATGCATAATGGTGATAACATAGTGATCAAAACCCTGGTTATAAATGTTCAGAATATTCAAAATCAAGTAGTTGTAACAGAACAGACTCAAGAAGTGGAACCAGAGATAGTTGAAAATGCTATTAAGAAGCTGATACAAAATCAGGAAACACACGACTTGTTTTGTCGTAATTGTAAGTCATGTGTTACCAAAAGAGTCATTCTCAAAAGAAGCTTGAAACATGGAGATGTGATCGTGCCAATTCCTGATGAAACTCATGTTGATACTGGACCTGATATAATGAAAGCCATTGTCTATGGTGGTCTCTGGGAATGCATCACTAGCCTAAGTGTCATAAGTTCTGCAGCAGGTGTAGATGCCACCACGTTGAATATTGTAGCTTTGGGACTTGCAAACGTCTTTGGAGGACTTGTTCTTCTTCTTCGTAATCTTAGGTTACTGAAACATGAGCAAGCAACGGCGAGTTATGAAGATCAACTGGGGAGGCCAGGGCACTTTCTGCTGCATGCAGTTGTTACCGTAATATCCTACCTTATATTCGGCCTTATATCTCCTATCATCTACGGCTTTGCCTTTCGCAAGAGTGACAACAAGGACTACAAACTCGGGATAGTTGCAGCTGCTTCGCTGGTGTGCATCATTTTTCTGTCTATTGTAAAGGCAAACGTCCAAAGGCCTAAAAAGCCATACATACAAACTATACTGTCTTACATCAGTGTGGGATTCATGATATCAGGGGCTGGATATGTTGCTGGTTATCTCATAAACATGTTACTCAAGAAGCTTGGTATATTTGACCCTAGGGCTCCCGTTACTATGTATGTGCCTGAAGCAGTAGCCATGGAGGTGGCCTGGTCATCTTATTGA MENTTINNIIIVTNGENPKIIEGANEQETNSEEQGVAQIGDTNGFTVHQIGIGAYKEIDIESDASTFKGPETSVGIQVVMDDTSNVDNAALSEMHNGDNIVIKTLVINVQNIQNQVVVTEQTQEVEPEIVENAIKKLIQNQETHDLFCRNCKSCVTKRVILKRSLKHGDVIVPIPDETHVDTGPDIMKAIVYGGLWECITSLSVISSAAGVDATTLNIVALGLANVFGGLVLLLRNLRLLKHEQATASYEDQLGRPGHFLLHAVVTVISYLIFGLISPIIYGFAFRKSDNKDYKLGIVAAASLVCIIFLSIVKANVQRPKKPYIQTILSYISVGFMISGAGYVAGYLINMLLKKLGIFDPRAPVTMYVPEAVAMEVAWSSY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22332.1 vs. NCBI nr
Match: gi|902232634|gb|KNA22738.1| (hypothetical protein SOVF_031670 [Spinacia oleracea]) HSP 1 Score: 733.8 bits (1893), Expect = 1.500e-208 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1
BLAST of Spo22332.1 vs. NCBI nr
Match: gi|410129766|dbj|BAM64844.1| (hypothetical protein [Beta vulgaris]) HSP 1 Score: 293.5 bits (750), Expect = 5.300e-76 Identity = 153/222 (68.92%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. NCBI nr
Match: gi|731321251|ref|XP_010671251.1| (PREDICTED: membrane protein of ER body-like protein isoform X4 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 293.1 bits (749), Expect = 6.900e-76 Identity = 152/222 (68.47%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. NCBI nr
Match: gi|731321253|ref|XP_010671252.1| (PREDICTED: membrane protein of ER body-like protein isoform X5 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 293.1 bits (749), Expect = 6.900e-76 Identity = 152/222 (68.47%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. NCBI nr
Match: gi|731321245|ref|XP_010671248.1| (PREDICTED: membrane protein of ER body-like protein isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 293.1 bits (749), Expect = 6.900e-76 Identity = 152/222 (68.47%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTF6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031670 PE=4 SV=1) HSP 1 Score: 733.8 bits (1893), Expect = 1.100e-208 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Match: K4Q463_BETVU (Uncharacterized protein OS=Beta vulgaris PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 3.700e-76 Identity = 153/222 (68.92%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKH4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g050440 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 4.800e-76 Identity = 152/222 (68.47%), Postives = 183/222 (82.43%), Query Frame = 1
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RT66_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031650 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.100e-72 Identity = 159/247 (64.37%), Postives = 179/247 (72.47%), Query Frame = 1
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RT63_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031650 PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 1.100e-72 Identity = 159/247 (64.37%), Postives = 179/247 (72.47%), Query Frame = 1
BLAST of Spo22332.1 vs. ExPASy Swiss-Prot
Match: MEBL_ARATH (Membrane protein of ER body-like protein OS=Arabidopsis thaliana GN=MEBL PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.800e-37 Identity = 85/191 (44.50%), Postives = 123/191 (64.40%), Query Frame = 1
BLAST of Spo22332.1 vs. ExPASy Swiss-Prot
Match: MEB1_ARATH (Membrane protein of ER body 1 OS=Arabidopsis thaliana GN=MEB1 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.300e-29 Identity = 98/306 (32.03%), Postives = 157/306 (51.31%), Query Frame = 1
BLAST of Spo22332.1 vs. ExPASy Swiss-Prot
Match: MEB2_ARATH (Membrane protein of ER body 2 OS=Arabidopsis thaliana GN=MEB2 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.100e-28 Identity = 71/181 (39.23%), Postives = 114/181 (62.98%), Query Frame = 1
BLAST of Spo22332.1 vs. TAIR (Arabidopsis)
Match: AT4G27870.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 157.5 bits (397), Expect = 1.600e-38 Identity = 85/191 (44.50%), Postives = 123/191 (64.40%), Query Frame = 1
BLAST of Spo22332.1 vs. TAIR (Arabidopsis)
Match: AT4G27860.1 (vacuolar iron transporter (VIT) family protein) HSP 1 Score: 132.1 bits (331), Expect = 7.200e-31 Identity = 98/306 (32.03%), Postives = 157/306 (51.31%), Query Frame = 1
BLAST of Spo22332.1 vs. TAIR (Arabidopsis)
Match: AT5G24290.1 (Vacuolar iron transporter (VIT) family protein) HSP 1 Score: 127.5 bits (319), Expect = 1.800e-29 Identity = 71/181 (39.23%), Postives = 114/181 (62.98%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22332.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22332.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22332.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo22332.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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