Spo22507 (gene) | SpinachBase

Overview


Name	Spo22507
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F)
Location	SpoScf_01311 : 141877 .. 145173 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCTGATGACCTGTTTCGACAGCTCTACCTGCGATAAGGTCGAGAATGAAAACAGAAGGTGTTCCAAAATTCAAACAAAGGACCTTCAATTTCCCTCCGCTGGTATTTCCCCACTCTCTCTCTCTTTTCTGCAGGTACTTCCTCAACTTTGCGCTTGTTTGTTTGTTGATTATTATGATATTTCAAAGTATCTTTTATGTATATTGGGATCTCATGCTTCTATTTTAACTTTCTCTCTAGGGTTTTATTAGTATTTTCTAGGGTTTTTCTTGTTCTTTGGTGCTCCAATTGTGCACTTTGTTGGTCAAATTGTTACATTTGCTGAAGTTTTCTGCTTTTGTTCAACCTTGTAATGTCTGAACTTTTTAGATTTCACTAGAACACTGCTGATTTCTCTGGGGTATTTTATCGAGCTGGTGGGTGGTTTTTTTGTGCCTTTGTGTGGCTAAGTTTTGACTTGTTTCTTAACAGATCAATCAGATCCTCTCTTCCTAAATGTGTTTTAGTTCTAACTTATTAATGTTACTCATAGCTAATTGGTGGTAGATTGAAAGTTCGAGACTAGGATATATAGATTGCAAATTAAATTAATGCGGTTTCCGTTCATGAATTCTCAATTGACTGATAAATTCTTTGTAAGGATAGTCCAAATTTCTTTGACCAATAAGCCCACAGTTTATTCAGAATTATCAACTCAATCCACGGAATTACGGTGTATTTGGTTTGCTGCCTTCTGTTGTGGATATCTCATATGGTTTATGTTGGATCATCTTTAAGTGATAAAATAATCAAAGTGATTCCCATTACTTTTATCGTTTATTAACTTTACTTCTCTAAGCTGGAAACTGAAATTGCTATTTGGCCCATTTATCCTCAGGAATTCAGGATAACACGGCGTTCTTGACTGTGAATCTAAATGGCGGTGAGCACTTACTTTTTGTCACATTTGTGATGTCTAATGCTTTAATGAATCAATTAAGTAGATTAATTGGTCTAATTTGATTGATGAAATTTTAATGTTTTTATGTCCCTGATGGCAATCATGAGGAGAAACATTTTCACTATGCTTTTACTCAATCCACTACATAGTGTGGTCGTGTGGGGAATTGGGGACGGAATATTGAAATTTCTCACTTCCATTTGGCCTTCTTATTACTCATTTTATGCTGGCTTCTTGGTCATTCATTATGATTAGCACCCCCAATTTCCCAAACATATTTGGATTACAGAATTTCTCCTGCTCAATGCAATAGTATCCTTATAATTTAAATCGAGTTAGGTGATGTCATGGTATGCTTAAATAATTGACCAACTTGCCTTCTTAACTTTATCTATTGACTTATACGGAATACATTATGCTCTTCTTCTGCCCCCTTATGACTGTGCGAGTGCCGAGTGGTATGTGTGGGATGCTGAAATGCAACTGTTGCAAGTCCTTGCAGTTTTGCGTGTAGCATTGCTTGTATGGACCTAATTGTCTGAAAACGCATACTTCTGTTTGGCCCACTTATACGGGGAAGGAAGGAGAGTGGTTACGTTGGTATTTTGTGATTAGTTTCAGTTTCAGGTGTGTTAGATTTTCCACCAGATTGTTGTCTGTTTTATATTTTGACTGTCATGATGAAACCTTTTCTTTAATAGTTGTGCTCCTTTGCAGACCGTCCCAGTTAACCCAAAACCTTTCTTGAACAATTTAACTGGAAAACCTGTCATCGTGAAGTTGAAGTGGGGAATGGAGTATAAAGGTAATTTTCCCGTGATCAGGAAATCTAATTTTGATGTTTTGAGTTTTTTTTCCTTTTTATTTCTCTTCAGTTTCATGACGTTCTCTTAAACTATCTTTCGCTTTCATTTTGGCTGGCAAGTCCAACGACTCAAAATTAGTTTTTACAGAAAAAGAAAGGGTGAAATTGCCATTTTCTTTTGTGTGAAGCATTTATTTGAGGTGTAACTGGTTAATTTCAATTGGCCACGGGGAAATATATGTGACAATGCTTTCATATGATCTTTTGCAGGTTATCTTGTGTCTGTTGATGGCTACATGAACCTACAGGTGCTTACTGAAAACCATTTTGTTTGACTGCATTTCAATGATACTTGTTCTGAACTAGTGGATGATTTTCTTTGTGTTGTATAAACTTGTATTGTTTAATATCATAGTTGCTTATCTTTTACATTGATGACTTGCCTGCAGCTGGCAAATACTGAAGAGTATATTGAAGGCCAGAAGACTGGAGATCTTGGAGAGATCCTCATCAGGTTATCAATGTTTTCTTTCAGTATCTACTGTTATCGCAAAGTGAAAATTCTTAGTACAGGATTGCACCTCTGATCTTTTTAGCAATATGGAGTACAATGTCTGCAACTTCTGAATTGTGCTTCGAAGTTAGAATACACAAACATTTTGCAACTGGTTCCATCTATTTTAATTGGTATAACCAGCTGGTGTTGGGGTGACTTGTTATACTTTTGAGTTTTGAGGGATGGGTTATATACTTATATATGTTGGGAGGTGACTTTTGCATTGTGTTGGAGTGATTTCTTATTTATTGGGAGGCTCCTTTCTGCATGCCTCGTCCACAAATCAGGTGAGATTGAGCTTATGAGATTGGTGCTGTGGTATGATGGTTTTATAGAGTAAATATTGTCTGATTTGCATTCGCTCATAACAGACGATGAACATCAATTCTTCTGATCTAGTCTTTCATGTTAACTTGTTGCTGAGTTTGTTTAGTTTACATGTTTTTTATTTCATCCCCAAGCTCCAGAATCTAACACCACCTTGTATTTCTGGGGTATTATTTCCCATAGGTGCAACAATGTCCTATATCTTCGGGGTGTTCCTGAGGACGAGGAGATAGAGGATGCTGATAAAGACTGACATACAAGCTTTTAGGATTGTTATATGTTGCAGATCTATCACAGCCAGCTCATGGGAGACGGATATATTAGGGCGTAGAAGTTACTGGCTAAGATGGGTGTGATACATGACATACAATTTACAGAGTGCGTATTATGTAAAAGAATCGCTTAATATGGCGTAACAAAATATTCGTACGAGTTTTATGGAAATGGAAATCTGGTTAGTTGGATGTTGTAGTTTATGACCTTTAAAGAGCTCCTTAATATCCCCAGAACTTGGGAGAATTCAGTCATATTGCTCCTTGCCTCCTTGGAAACCACCTAGATTTAAGAGATTCAGATAGGATACGTACTCCATTAAAAAGATTTCACATTTTCTAGAAATTACGTTCGGAATTTTTGATAAAGTACCCTTCTTCCCCCTTCTAACAAAC

mRNA sequence

GACCTGATGACCTGTTTCGACAGCTCTACCTGCGATAAGGTCGAGAATGAAAACAGAAGGTGTTCCAAAATTCAAACAAAGGACCTTCAATTTCCCTCCGCTGGTATTTCCCCACTCTCTCTCTCTTTTCTGCAGGAATTCAGGATAACACGGCGTTCTTGACTGTGAATCTAAATGGCGACCGTCCCAGTTAACCCAAAACCTTTCTTGAACAATTTAACTGGAAAACCTGTCATCGTGAAGTTGAAGTGGGGAATGGAGTATAAAGGTTATCTTGTGTCTGTTGATGGCTACATGAACCTACAGCTGGCAAATACTGAAGAGTATATTGAAGGCCAGAAGACTGGAGATCTTGGAGAGATCCTCATCAGGTGCAACAATGTCCTATATCTTCGGGGTGTTCCTGAGGACGAGGAGATAGAGGATGCTGATAAAGACTGACATACAAGCTTTTAGGATTGTTATATGTTGCAGATCTATCACAGCCAGCTCATGGGAGACGGATATATTAGGGCGTAGAAGTTACTGGCTAAGATGGGTGTGATACATGACATACAATTTACAGAGTGCGTATTATGTAAAAGAATCGCTTAATATGGCGTAACAAAATATTCGTACGAGTTTTATGGAAATGGAAATCTGGTTAGTTGGATGTTGTAGTTTATGACCTTTAAAGAGCTCCTTAATATCCCCAGAACTTGGGAGAATTCAGTCATATTGCTCCTTGCCTCCTTGGAAACCACCTAGATTTAAGAGATTCAGATAGGATACGTACTCCATTAAAAAGATTTCACATTTTCTAGAAATTACGTTCGGAATTTTTGATAAAGTACCCTTCTTCCCCCTTCTAACAAAC

Coding sequence (CDS)

ATGGCGACCGTCCCAGTTAACCCAAAACCTTTCTTGAACAATTTAACTGGAAAACCTGTCATCGTGAAGTTGAAGTGGGGAATGGAGTATAAAGGTTATCTTGTGTCTGTTGATGGCTACATGAACCTACAGCTGGCAAATACTGAAGAGTATATTGAAGGCCAGAAGACTGGAGATCTTGGAGAGATCCTCATCAGGTGCAACAATGTCCTATATCTTCGGGGTGTTCCTGAGGACGAGGAGATAGAGGATGCTGATAAAGACTGA

Protein sequence

MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGEILIRCNNVLYLRGVPEDEEIEDADKD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo22507.1	Spo22507.1	mRNA

Homology

[Close]

BLAST of Spo22507.1 vs. NCBI nr
Match: gi|902200722|gb|KNA13809.1| (hypothetical protein SOVF_113340 [Spinacia oleracea])

HSP 1 Score: 184.9 bits (468), Expect = 6.100e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDADKD
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 88

[Close]

BLAST of Spo22507.1 vs. NCBI nr
Match: gi|731312030|ref|XP_010672300.1| (PREDICTED: probable small nuclear ribonucleoprotein F [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 178.7 bits (452), Expect = 4.400e-42
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVL+LRGVPEDEEIEDAD D
Sbjct: 61 GEILIRCNNVLHLRGVPEDEEIEDADND 88

[Close]

BLAST of Spo22507.1 vs. NCBI nr
Match: gi|731378546|ref|XP_010668211.1| (PREDICTED: probable small nuclear ribonucleoprotein F [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 177.9 bits (450), Expect = 7.500e-42
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVL+LRGVPEDEEI+DAD+D
Sbjct: 61 GEILIRCNNVLHLRGVPEDEEIDDADQD 88

[Close]

BLAST of Spo22507.1 vs. NCBI nr
Match: gi|719966333|ref|XP_010258634.1| (PREDICTED: probable small nuclear ribonucleoprotein F [Nelumbo nucifera])

HSP 1 Score: 173.7 bits (439), Expect = 1.400e-40
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYI+GQ TG+L
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDAYMNLQLANTEEYIDGQFTGNL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDA++D
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDAERD 88

[Close]

BLAST of Spo22507.1 vs. NCBI nr
Match: gi|951003969|ref|XP_014507745.1| (PREDICTED: probable small nuclear ribonucleoprotein F [Vigna radiata var. radiata])

HSP 1 Score: 172.9 bits (437), Expect = 2.400e-40
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQ TG+L
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDA +D
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDAAED 88

[Close]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4D7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_004180 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.300e-44
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDADKD
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 88

[Close]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FYC9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006230 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.100e-42
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVL+LRGVPEDEEIEDAD D
Sbjct: 61 GEILIRCNNVLHLRGVPEDEEIEDADND 88

[Close]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DVD8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_015110 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.200e-42
Identity = 84/88 (95.45%), Postives = 87/88 (98.86%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQKTGDL
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQKTGDL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVL+LRGVPEDEEI+DAD+D
Sbjct: 61 GEILIRCNNVLHLRGVPEDEEIDDADQD 88

[Close]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Match: A0A0S3R856_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G478900 PE=3 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.700e-40
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQ TG+L
Sbjct: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDA +D
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDAAED 88

[Close]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Match: I3SY08_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.700e-40
Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MAT+PVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVD YMNLQLANTEEYIEGQ TG+L
Sbjct: 1  MATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLYLRGVPEDEEIEDA +D
Sbjct: 61 GEILIRCNNVLYLRGVPEDEEIEDAPED 88

[Close]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Match: RUXF_ARATH (Probable small nuclear ribonucleoprotein F OS=Arabidopsis thaliana GN=At4g30220 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.100e-40
Identity = 76/88 (86.36%), Postives = 83/88 (94.32%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          MAT+PVNPKPFLNNLTGK VIVKLKWGMEYKG+L SVD YMNLQL NTEEYI+GQ TG+L
Sbjct: 1  MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 60

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLY+RGVPEDEE+EDAD+D
Sbjct: 61 GEILIRCNNVLYVRGVPEDEELEDADQD 88

[Close]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Match: RUXF_XENLA (Small nuclear ribonucleoprotein F OS=Xenopus laevis GN=snrpf PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.500e-34
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = 1

		  
Query: 3  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGE 62
          ++P+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDGYMN+QLANTEEYI+G  +G LGE
Sbjct: 2  SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGE 61

Query: 63 ILIRCNNVLYLRGVPEDEE 82
          +LIRCNNVLY+RGV E+EE
Sbjct: 62 VLIRCNNVLYIRGVEEEEE 80

[Close]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Match: RUXF_HUMAN (Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.500e-34
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = 1

		  
Query: 3  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGE 62
          ++P+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDGYMN+QLANTEEYI+G  +G LGE
Sbjct: 2  SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGE 61

Query: 63 ILIRCNNVLYLRGVPEDEE 82
          +LIRCNNVLY+RGV E+EE
Sbjct: 62 VLIRCNNVLYIRGVEEEEE 80

[Close]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Match: RUXF_MOUSE (Small nuclear ribonucleoprotein F OS=Mus musculus GN=Snrpf PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 7.500e-34
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = 1

		  
Query: 3  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGE 62
          ++P+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDGYMN+QLANTEEYI+G  +G LGE
Sbjct: 2  SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGE 61

Query: 63 ILIRCNNVLYLRGVPEDEE 82
          +LIRCNNVLY+RGV E+EE
Sbjct: 62 VLIRCNNVLYIRGVEEEEE 80

[Close]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Match: RUXF_BOVIN (Small nuclear ribonucleoprotein F OS=Bos taurus GN=SNRPF PE=3 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 7.500e-34
Identity = 64/79 (81.01%), Postives = 74/79 (93.67%), Query Frame = 1

		  
Query: 3  TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGE 62
          ++P+NPKPFLN LTGKPV+VKLKWGMEYKGYLVSVDGYMN+QLANTEEYI+G  +G LGE
Sbjct: 2  SLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGE 61

Query: 63 ILIRCNNVLYLRGVPEDEE 82
          +LIRCNNVLY+RGV E+EE
Sbjct: 62 VLIRCNNVLYIRGVEEEEE 80

[Close]

BLAST of Spo22507.1 vs. TAIR (Arabidopsis)
Match: AT4G30220.2 (small nuclear ribonucleoprotein F)

HSP 1 Score: 162.2 bits (409), Expect = 1.500e-40
Identity = 74/88 (84.09%), Postives = 82/88 (93.18%), Query Frame = 1

		  
Query: 1  MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDL 60
          + T+PVNPKPFLNNLTGK VIVKLKWGMEYKG+L SVD YMNLQL NTEEYI+GQ TG+L
Sbjct: 9  LQTIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNL 68

Query: 61 GEILIRCNNVLYLRGVPEDEEIEDADKD 89
          GEILIRCNNVLY+RGVPEDEE+EDAD+D
Sbjct: 69 GEILIRCNNVLYVRGVPEDEELEDADQD 96

[Close]

BLAST of Spo22507.1 vs. TAIR (Arabidopsis)
Match: AT2G14285.1 (Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 112.5 bits (280), Expect = 1.400e-25
Identity = 51/61 (83.61%), Postives = 57/61 (93.44%), Query Frame = 1

		  
Query: 28 MEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGEILIRCNNVLYLRGVPEDEEIEDADK 87
          MEYKG+L SVD YMNLQL NTEEYI+GQ TG+LGEILIRCNNVLY+RGVPEDEE+EDAD+
Sbjct: 1  MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGVPEDEELEDADQ 60

Query: 88 D 89
          D
Sbjct: 61 D 61

[Close]

BLAST of Spo22507.1 vs. TAIR (Arabidopsis)
Match: AT2G43810.1 (Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 77.8 bits (190), Expect = 3.700e-15
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1

		  
Query: 8  PKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGEILIRC 67
          P  FL ++ GKPV+VKL  G++Y+G L  +DGYMN+ +  TEEY+ GQ     G+  +R 
Sbjct: 15 PADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQLKNTYGDAFVRG 74

Query: 68 NNVLYL 74
          NNVLY+
Sbjct: 75 NNVLYI 80

[Close]

BLAST of Spo22507.1 vs. TAIR (Arabidopsis)
Match: AT3G59810.1 (Small nuclear ribonucleoprotein family protein)

HSP 1 Score: 77.0 bits (188), Expect = 6.400e-15
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 1

		  
Query: 8  PKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDGYMNLQLANTEEYIEGQKTGDLGEILIRC 67
          P  FL ++ G+PV+VKL  G++Y+G L  +DGYMN+ +  TEEY+ GQ     G+  IR 
Sbjct: 15 PADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRG 74

Query: 68 NNVLYLRGV 77
          NNVLY+  V
Sbjct: 75 NNVLYISTV 83

The following BLAST results are available for this feature:

BLAST of Spo22507.1 vs. NCBI nr
BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
BLAST of Spo22507.1 vs. TAIR (Arabidopsis)

BLAST of Spo22507.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902200722\|gb\|KNA13809.1\|	6.1e-44	100.	hypothetical protein SOVF_1133...	[more]
gi\|731312030\|ref\|XP_010672300.1\|	4.4e-42	96.5	PREDICTED: probable small nucl...	[more]
gi\|731378546\|ref\|XP_010668211.1\|	7.5e-42	95.4	PREDICTED: probable small nucl...	[more]
gi\|719966333\|ref\|XP_010258634.1\|	1.4e-40	93.1	PREDICTED: probable small nucl...	[more]
gi\|951003969\|ref\|XP_014507745.1\|	2.4e-40	94.3	PREDICTED: probable small nucl...	[more]

BLAST of Spo22507.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9R4D7_SPIOL	4.3e-44	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FYC9_BETVU	3.1e-42	96.5	Uncharacterized protein OS=Bet...	[more]
A0A0J8DVD8_BETVU	5.2e-42	95.4	Uncharacterized protein OS=Bet...	[more]
A0A0S3R856_PHAAN	1.7e-40	94.3	Uncharacterized protein OS=Vig...	[more]
I3SY08_LOTJA	1.7e-40	93.1	Uncharacterized protein OS=Lot...	[more]

BLAST of Spo22507.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
RUXF_ARATH	3.1e-40	86.3	Probable small nuclear ribonuc...	[more]
RUXF_XENLA	7.5e-34	81.0	Small nuclear ribonucleoprotei...	[more]
RUXF_HUMAN	7.5e-34	81.0	Small nuclear ribonucleoprotei...	[more]
RUXF_MOUSE	7.5e-34	81.0	Small nuclear ribonucleoprotei...	[more]
RUXF_BOVIN	7.5e-34	81.0	Small nuclear ribonucleoprotei...	[more]

BLAST of Spo22507.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT4G30220.2	1.5e-40	84.0	small nuclear ribonucleoprotei...	[more]
AT2G14285.1	1.4e-25	83.6	Small nuclear ribonucleoprotei...	[more]
AT2G43810.1	3.7e-15	48.4	Small nuclear ribonucleoprotei...	[more]
AT3G59810.1	6.4e-15	47.8	Small nuclear ribonucleoprotei...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001163	LSM domain, eukaryotic/archaea-type	PFAM	PF01423	LSM	coord: 11..73 score: 1.2
IPR001163	LSM domain, eukaryotic/archaea-type	SMART	SM00651	Sm3	coord: 10..75 score: 3.3
IPR010920	LSM domain	unknown	SSF50182	Sm-like ribonucleoproteins	coord: 8..77 score: 4.7
IPR016487	Sm-like protein Lsm6/SmF	PIR	PIRSF006609	snRNP_SmF	coord: 1..84 score: 1.5
None	No IPR available	GENE3D	2.30.30.100		coord: 11..77 score: 2.0
None	No IPR available	PANTHER	PTHR11021	SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F	coord: 1..87 score: 2.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006547	histidine metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0010431	seed maturation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006427	histidyl-tRNA aminoacylation
biological_process	GO:0016049	cell growth
biological_process	GO:0034613	cellular protein localization
biological_process	GO:0045184	establishment of protein localization
biological_process	GO:0051205	protein insertion into membrane
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0032940	secretion by cell
biological_process	GO:0015979	photosynthesis
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0030243	cellulose metabolic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0045040	protein import into mitochondrial outer membrane
biological_process	GO:0015716	organic phosphonate transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0015748	organophosphate ester transport
biological_process	GO:0008380	RNA splicing
biological_process	GO:0006508	proteolysis
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0000105	histidine biosynthetic process
biological_process	GO:0006021	inositol biosynthetic process
biological_process	GO:0046854	phosphatidylinositol phosphorylation
biological_process	GO:0019872	streptomycin biosynthetic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0009853	photorespiration
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0042221	response to chemical
biological_process	GO:0006950	response to stress
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0032259	methylation
biological_process	GO:0006996	organelle organization
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0043269	regulation of ion transport
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0009620	response to fungus
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009611	response to wounding
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0000902	cell morphogenesis
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0032482	Rab protein signal transduction
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006687	glycosphingolipid metabolic process
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006833	water transport
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0009693	ethylene biosynthetic process
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:1901679	nucleotide transmembrane transport
biological_process	GO:0009555	pollen development
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0046512	sphingosine biosynthetic process
biological_process	GO:0043090	amino acid import
biological_process	GO:0015696	ammonium transport
biological_process	GO:0015802	basic amino acid transport
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0009165	nucleotide biosynthetic process
biological_process	GO:0035999	tetrahydrofolate interconversion
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0046487	glyoxylate metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006550	isoleucine catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006552	leucine catabolic process
biological_process	GO:0046251	limonene catabolic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0006568	tryptophan metabolic process
biological_process	GO:0006574	valine catabolic process
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0018874	benzoate metabolic process
biological_process	GO:0070676	intralumenal vesicle formation
biological_process	GO:0061025	membrane fusion
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0046939	nucleotide phosphorylation
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0046034	ATP metabolic process
biological_process	GO:0015031	protein transport
biological_process	GO:0009396	folic acid-containing compound biosynthetic process
biological_process	GO:0010200	response to chitin
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0097031	obsolete mitochondrial respiratory chain complex I biogenesis
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0097034	obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process	GO:0010048	vernalization response
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0009627	systemic acquired resistance
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0044375	regulation of peroxisome size
biological_process	GO:0016559	peroxisome fission
biological_process	GO:0031347	regulation of defense response
biological_process	GO:0007034	vacuolar transport
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0006810	transport
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0030122	AP-2 adaptor complex
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005768	endosome
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005802	trans-Golgi network
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0017059	serine C-palmitoyltransferase complex
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0000815	ESCRT III complex
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0005801	cis-Golgi network
cellular_component	GO:0005797	Golgi medial cisterna
cellular_component	GO:0045259	proton-transporting ATP synthase complex
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005835	fatty acid synthase complex
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005787	signal peptidase complex
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0008287	protein serine/threonine phosphatase complex
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005779	integral component of peroxisomal membrane
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0016607	nuclear speck
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005771	multivesicular body
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004722	protein serine/threonine phosphatase activity
molecular_function	GO:0033858	N-acetylgalactosamine kinase activity
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0015215	nucleotide transmembrane transporter activity
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004335	galactokinase activity
molecular_function	GO:0004821	histidine-tRNA ligase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0046914	transition metal ion binding
molecular_function	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0019003	GDP binding
molecular_function	GO:0004477	methenyltetrahydrofolate cyclohydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0016783	sulfurtransferase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0052833	inositol monophosphate 4-phosphatase activity
molecular_function	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0004721	phosphoprotein phosphatase activity
molecular_function	GO:0004017	adenylate kinase activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0004300	enoyl-CoA hydratase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0030955	potassium ion binding
molecular_function	GO:0004743	pyruvate kinase activity
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0052832	inositol monophosphate 3-phosphatase activity
molecular_function	GO:0051750	delta3,5-delta2,4-dienoyl-CoA isomerase activity
molecular_function	GO:0004758	serine C-palmitoyltransferase activity
molecular_function	GO:1901363	heterocyclic compound binding
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0004808	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
molecular_function	GO:0015416	ATPase-coupled organic phosphonate transmembrane transporter activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0097159	organic cyclic compound binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008934	inositol monophosphate 1-phosphatase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0070330	aromatase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004401	histidinol-phosphatase activity
molecular_function	GO:0004314	[acyl-carrier-protein] S-malonyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo02513	0.77	Barchart \| Table
Spo06146	0.75	Barchart \| Table
Spo08589	0.75	Barchart \| Table
Spo11951	0.74	Barchart \| Table
Spo12959	0.74	Barchart \| Table
Spo00013	0.72	Barchart \| Table
Spo12620	0.72	Barchart \| Table
Spo10136	0.72	Barchart \| Table
Spo04868	0.72	Barchart \| Table
Spo03306	0.72	Barchart \| Table
Spo00400	0.72	Barchart \| Table
Spo11509	0.71	Barchart \| Table
Spo23710	0.71	Barchart \| Table
Spo23527	0.71	Barchart \| Table
Spo04483	0.71	Barchart \| Table
Spo04908	0.71	Barchart \| Table
Spo22715	0.71	Barchart \| Table
Spo00854	0.71	Barchart \| Table
Spo03195	0.70	Barchart \| Table
Spo01801	0.70	Barchart \| Table
Spo03654	0.70	Barchart \| Table
Spo21531	0.70	Barchart \| Table
Spo23886	0.70	Barchart \| Table
Spo06670	0.70	Barchart \| Table
Spo25851	0.70	Barchart \| Table
Spo27102	0.70	Barchart \| Table
Spo04682	0.70	Barchart \| Table
Spo02221	0.69	Barchart \| Table
Spo14779	0.69	Barchart \| Table
Spo23440	0.69	Barchart \| Table
Spo13107	0.69	Barchart \| Table
Spo09604	0.69	Barchart \| Table
Spo01970	0.69	Barchart \| Table
Spo09803	0.69	Barchart \| Table
Spo15630	0.69	Barchart \| Table
Spo05640	0.69	Barchart \| Table
Spo18111	0.69	Barchart \| Table
Spo24857	0.69	Barchart \| Table
Spo17291	0.69	Barchart \| Table
Spo01305	0.68	Barchart \| Table
Spo23588	0.68	Barchart \| Table
Spo10916	0.68	Barchart \| Table
Spo00283	0.68	Barchart \| Table
Spo11346	0.68	Barchart \| Table
Spo20952	0.68	Barchart \| Table
Spo01437	0.68	Barchart \| Table
Spo20600	0.68	Barchart \| Table
Spo09536	0.68	Barchart \| Table
Spo09752	0.68	Barchart \| Table
Spo19874	0.68	Barchart \| Table
Spo15084	0.68	Barchart \| Table
Spo17329	0.68	Barchart \| Table
Spo24679	0.68	Barchart \| Table
Spo02407	0.68	Barchart \| Table
Spo15782	0.67	Barchart \| Table
Spo01638	0.67	Barchart \| Table
Spo02579	0.67	Barchart \| Table
Spo06949	0.67	Barchart \| Table
Spo07596	0.67	Barchart \| Table
Spo10895	0.67	Barchart \| Table
Spo11436	0.67	Barchart \| Table
Spo11520	0.67	Barchart \| Table
Spo17110	0.67	Barchart \| Table
Spo17755	0.67	Barchart \| Table
Spo20071	0.67	Barchart \| Table
Spo21802	0.67	Barchart \| Table
Spo26168	0.67	Barchart \| Table
Spo28098	0.67	Barchart \| Table
Spo19599	0.66	Barchart \| Table
Spo11015	0.66	Barchart \| Table
Spo10624	0.66	Barchart \| Table
Spo15869	0.66	Barchart \| Table
Spo27030	0.66	Barchart \| Table
Spo10500	0.66	Barchart \| Table
Spo10473	0.66	Barchart \| Table
Spo22256	0.66	Barchart \| Table
Spo22326	0.66	Barchart \| Table
Spo22679	0.66	Barchart \| Table
Spo05651	0.66	Barchart \| Table
Spo04104	0.66	Barchart \| Table
Spo03018	0.66	Barchart \| Table
Spo24590	0.66	Barchart \| Table
Spo01923	0.66	Barchart \| Table
Spo25330	0.66	Barchart \| Table
Spo25876	0.66	Barchart \| Table
Spo30013	0.66	Barchart \| Table
Spo26811	0.66	Barchart \| Table
Spo14454	0.66	Barchart \| Table
Spo11911	0.66	Barchart \| Table
Spo15302	0.66	Barchart \| Table
Spo10171	0.66	Barchart \| Table
Spo09940	0.66	Barchart \| Table
Spo20027	0.66	Barchart \| Table
Spo27163	0.66	Barchart \| Table
Spo20544	0.66	Barchart \| Table
Spo09149	0.66	Barchart \| Table
Spo06679	0.66	Barchart \| Table
Spo27374	0.66	Barchart \| Table
Spo00501	0.65	Barchart \| Table
Spo18103	0.65	Barchart \| Table
Spo02278	0.65	Barchart \| Table
Spo15606	0.65	Barchart \| Table
Spo13491	0.65	Barchart \| Table
Spo12291	0.65	Barchart \| Table
Spo04254	0.65	Barchart \| Table
Spo25838	0.65	Barchart \| Table
Spo03047	0.65	Barchart \| Table
Spo20770	0.65	Barchart \| Table
Spo01243	0.65	Barchart \| Table
Spo21367	0.65	Barchart \| Table
Spo05968	0.65	Barchart \| Table
Spo02345	0.65	Barchart \| Table
Spo12302	0.65	Barchart \| Table