Spo22672 (gene)

Overview
NameSpo22672
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBeta-amylase (3.2.1.2)
LocationSpoScf_20277 : 752 .. 1093 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGACGTATGGTGGGGAATTATAGAATCCAAAGGTCCAAAGCAATATGATTGGAAGGCTTATCGACGTTTATTCCAAGTTGTACAAGAATGTGGCCTCAAAATCCAAGCTATTATGTCTTTCCACCAATGTGGAGGCAATGTTGGGGATATTGTCTTCATTCCACTCCCTCAATGGGTTCTCGATGTTGCCAAATCCAACCCCGATATCTTTTATACCAATCTATCTGGTGTTAGGAACCCCGAATATCTTAGTCTTGGTGTCGATAATGAGCCTCTCTTTGGAGGAAGAACACCTATCCAGGTAACTATATGTGCTTATTACATCGAATTTGTTTAG

mRNA sequence

ATGGTGGACGTATGGTGGGGAATTATAGAATCCAAAGGTCCAAAGCAATATGATTGGAAGGCTTATCGACGTTTATTCCAAGTTGTACAAGAATGTGGCCTCAAAATCCAAGCTATTATGTCTTTCCACCAATGTGGAGGCAATGTTGGGGATATTGTCTTCATTCCACTCCCTCAATGGGTTCTCGATGTTGCCAAATCCAACCCCGATATCTTTTATACCAATCTATCTGGTGTTAGGAACCCCGAATATCTTAGTCTTGGTGTCGATAATGAGCCTCTCTTTGGAGGAAGAACACCTATCCAGGTAACTATATGTGCTTATTACATCGAATTTGTTTAG

Coding sequence (CDS)

ATGGTGGACGTATGGTGGGGAATTATAGAATCCAAAGGTCCAAAGCAATATGATTGGAAGGCTTATCGACGTTTATTCCAAGTTGTACAAGAATGTGGCCTCAAAATCCAAGCTATTATGTCTTTCCACCAATGTGGAGGCAATGTTGGGGATATTGTCTTCATTCCACTCCCTCAATGGGTTCTCGATGTTGCCAAATCCAACCCCGATATCTTTTATACCAATCTATCTGGTGTTAGGAACCCCGAATATCTTAGTCTTGGTGTCGATAATGAGCCTCTCTTTGGAGGAAGAACACCTATCCAGGTAACTATATGTGCTTATTACATCGAATTTGTTTAG

Protein sequence

MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQWVLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQVTICAYYIEFV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22672.1Spo22672.1mRNA


Homology
[Close]
BLAST of Spo22672.1 vs. NCBI nr
Match: gi|902218508|gb|KNA18041.1| (hypothetical protein SOVF_074390 [Spinacia oleracea])

HSP 1 Score: 226.5 bits (576), Expect = 2.400e-56
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW
Sbjct: 59  MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 118

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ+
Sbjct: 119 VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQI 161
[Close]
BLAST of Spo22672.1 vs. NCBI nr
Match: gi|731354862|ref|XP_010688831.1| (PREDICTED: beta-amylase-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.0 bits (502), Expect = 9.000e-48
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWW  IE KGPKQYDWKAYRRLFQ+VQ+ GLKIQAIMSFHQCGGNVGDIV IPLPQW
Sbjct: 106 MVDVWWATIEGKGPKQYDWKAYRRLFQIVQQYGLKIQAIMSFHQCGGNVGDIVNIPLPQW 165

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLDV KSNPDIFYTNL+G RN EYLSLGVD++PLF GRTPIQ+
Sbjct: 166 VLDVGKSNPDIFYTNLAGTRNAEYLSLGVDDKPLFDGRTPIQI 208
[Close]
BLAST of Spo22672.1 vs. NCBI nr
Match: gi|870850310|gb|KMT02421.1| (hypothetical protein BVRB_9g203760 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 198.0 bits (502), Expect = 9.000e-48
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWW  IE KGPKQYDWKAYRRLFQ+VQ+ GLKIQAIMSFHQCGGNVGDIV IPLPQW
Sbjct: 51  MVDVWWATIEGKGPKQYDWKAYRRLFQIVQQYGLKIQAIMSFHQCGGNVGDIVNIPLPQW 110

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLDV KSNPDIFYTNL+G RN EYLSLGVD++PLF GRTPIQ+
Sbjct: 111 VLDVGKSNPDIFYTNLAGTRNAEYLSLGVDDKPLFDGRTPIQI 153
[Close]
BLAST of Spo22672.1 vs. NCBI nr
Match: gi|731355703|ref|XP_010689279.1| (PREDICTED: beta-amylase-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 195.7 bits (496), Expect = 4.500e-47
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYR LFQV+++CGLK+QAIMSFHQCGGNVGD VFIPLPQW
Sbjct: 48  MVDVWWGIIESKGPKQYDWKAYRSLFQVIKDCGLKVQAIMSFHQCGGNVGDGVFIPLPQW 107

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ 103
           VL V   NPDIFYTN  G RN EYL+LGVDNEP+ GGRTPIQ
Sbjct: 108 VLQVGDGNPDIFYTNRRGTRNKEYLTLGVDNEPIIGGRTPIQ 149
[Close]
BLAST of Spo22672.1 vs. NCBI nr
Match: gi|870850115|gb|KMT02261.1| (hypothetical protein BVRB_9g206490 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 195.7 bits (496), Expect = 4.500e-47
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYR LFQV+++CGLK+QAIMSFHQCGGNVGD VFIPLPQW
Sbjct: 48  MVDVWWGIIESKGPKQYDWKAYRSLFQVIKDCGLKVQAIMSFHQCGGNVGDGVFIPLPQW 107

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ 103
           VL V   NPDIFYTN  G RN EYL+LGVDNEP+ GGRTPIQ
Sbjct: 108 VLQVGDGNPDIFYTNRRGTRNKEYLTLGVDNEPIIGGRTPIQ 149
[Close]
BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REX2_SPIOL (Beta-amylase OS=Spinacia oleracea GN=SOVF_074390 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.600e-56
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW
Sbjct: 59  MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 118

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ+
Sbjct: 119 VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQI 161
[Close]
BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EHD8_BETVU (Beta-amylase OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g203760 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 6.300e-48
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWW  IE KGPKQYDWKAYRRLFQ+VQ+ GLKIQAIMSFHQCGGNVGDIV IPLPQW
Sbjct: 51  MVDVWWATIEGKGPKQYDWKAYRRLFQIVQQYGLKIQAIMSFHQCGGNVGDIVNIPLPQW 110

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLDV KSNPDIFYTNL+G RN EYLSLGVD++PLF GRTPIQ+
Sbjct: 111 VLDVGKSNPDIFYTNLAGTRNAEYLSLGVDDKPLFDGRTPIQI 153
[Close]
BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EGY4_BETVU (Beta-amylase OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206490 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.100e-47
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYR LFQV+++CGLK+QAIMSFHQCGGNVGD VFIPLPQW
Sbjct: 48  MVDVWWGIIESKGPKQYDWKAYRSLFQVIKDCGLKVQAIMSFHQCGGNVGDGVFIPLPQW 107

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ 103
           VL V   NPDIFYTN  G RN EYL+LGVDNEP+ GGRTPIQ
Sbjct: 108 VLQVGDGNPDIFYTNRRGTRNKEYLTLGVDNEPIIGGRTPIQ 149
[Close]
BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBY7_BETVU (Beta-amylase OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g126940 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.900e-47
Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYR LFQ +++CGLK+QAIMSFHQCGGNVGD V+IPLPQW
Sbjct: 48  MVDVWWGIIESKGPKQYDWKAYRSLFQAIKDCGLKVQAIMSFHQCGGNVGDGVYIPLPQW 107

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VL V   NPDIFYTN  G RN EYL+LGVDNEP+ GGRTPIQV
Sbjct: 108 VLQVGDGNPDIFYTNKRGTRNKEYLTLGVDNEPIIGGRTPIQV 150
[Close]
BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBR4_BETVU (Beta-amylase OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g126940 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.900e-47
Identity = 84/103 (81.55%), Postives = 91/103 (88.35%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDWKAYR LFQ +++CGLK+QAIMSFHQCGGNVGD V+IPLPQW
Sbjct: 48  MVDVWWGIIESKGPKQYDWKAYRSLFQAIKDCGLKVQAIMSFHQCGGNVGDGVYIPLPQW 107

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VL V   NPDIFYTN  G RN EYL+LGVDNEP+ GGRTPIQV
Sbjct: 108 VLQVGDGNPDIFYTNKRGTRNKEYLTLGVDNEPIIGGRTPIQV 150
[Close]
BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 5.800e-47
Identity = 81/103 (78.64%), Postives = 92/103 (89.32%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIE KGPKQYDW+AYR LFQ+VQECGL +QAIMSFHQCGGNVGDIV IP+PQW
Sbjct: 52  MVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQW 111

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLD+ +SN DIFYTN SG RN EYL++GVDNEP+F GRT I++
Sbjct: 112 VLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEI 154
[Close]
BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.600e-47
Identity = 77/103 (74.76%), Postives = 94/103 (91.26%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           M+DVWWGIIE KGPK+YDW AY+ LFQ+VQ+CGLK+QAIMSFHQCGGNVGD+V IPLP+W
Sbjct: 52  MIDVWWGIIEQKGPKEYDWSAYKSLFQLVQKCGLKLQAIMSFHQCGGNVGDVVNIPLPKW 111

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLD+ +S+PDIFYTN SG+RN EYLS+GVDN+P+F GRT I++
Sbjct: 112 VLDIGESDPDIFYTNRSGIRNQEYLSIGVDNKPIFHGRTAIEI 154
[Close]
BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 7.600e-47
Identity = 79/103 (76.70%), Postives = 93/103 (90.29%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIE KGPKQYDW AY+ LFQ+VQECGLK+QAIMSFHQCGGNVGD+V IP+PQW
Sbjct: 52  MVDVWWGIIEQKGPKQYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVNIPIPQW 111

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLD+ +S+PDIFYTN SG R+ EYL++GVDN+P+F GRT I+V
Sbjct: 112 VLDIGESDPDIFYTNRSGTRDKEYLTIGVDNKPIFHGRTAIEV 154
[Close]
BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.200e-46
Identity = 77/103 (74.76%), Postives = 93/103 (90.29%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIE KGPK+YDW AY+ LFQ+VQECGLK+QAIMSFHQCGGNVGD+V IP+PQW
Sbjct: 52  MVDVWWGIIEQKGPKEYDWSAYKSLFQLVQECGLKLQAIMSFHQCGGNVGDVVTIPIPQW 111

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VLD+ +S+PDIFYTN SG R+ EYL++GVDN+P+F GRT I++
Sbjct: 112 VLDIGESDPDIFYTNRSGTRDKEYLTVGVDNKPIFHGRTAIEI 154
[Close]
BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 183.3 bits (464), Expect = 1.400e-45
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIE+KGPKQYDW AYR LFQ+V++CGLKIQAIMSFHQCGGNVGD VFIP+PQW
Sbjct: 53  MVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGGNVGDAVFIPIPQW 112

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           +L +   NPDIFYTN +G RN EYLSLGVDN+ LF GRT +++
Sbjct: 113 ILQIGDKNPDIFYTNRAGNRNQEYLSLGVDNQRLFQGRTALEM 155
[Close]
BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Match: AT4G15210.1 (beta-amylase 5)

HSP 1 Score: 175.3 bits (443), Expect = 2.200e-44
Identity = 76/103 (73.79%), Postives = 87/103 (84.47%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGIIESKGPKQYDW AY+ LFQ++   GLKIQAIMSFHQCGGNVGDIV IP+PQW
Sbjct: 54  MVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQW 113

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           V DV  ++PDI+YTN  G R+ EYLS+GVDN PLF GRT +Q+
Sbjct: 114 VRDVGDNDPDIYYTNRKGTRDIEYLSIGVDNLPLFAGRTAVQL 156
[Close]
BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Match: AT2G32290.1 (beta-amylase 6)

HSP 1 Score: 165.6 bits (418), Expect = 1.700e-41
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVDVWWGI+ESKGPKQY W AYR LF +VQ  GLK+QAIMSFH+CGGN+GD V IP+P+W
Sbjct: 117 MVDVWWGIVESKGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKW 176

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VL++  SNPDIFYTN SG RN E LSL VDN  LF GRT +++
Sbjct: 177 VLEIGDSNPDIFYTNKSGNRNKECLSLSVDNLSLFRGRTAVEM 219
[Close]
BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Match: AT4G17090.1 (chloroplast beta-amylase)

HSP 1 Score: 151.4 bits (381), Expect = 3.400e-37
Identity = 63/103 (61.17%), Postives = 77/103 (74.76%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           MVD WWG++E  GP  Y+W+ Y  L Q+VQ+ GLK+Q +MSFHQCGGNVGD   IPLP W
Sbjct: 125 MVDAWWGLVEKDGPMNYNWEGYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPW 184

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
           VL+    NPD+ YT+ SG RNPEY+SLG D+ P+  GRTPIQV
Sbjct: 185 VLEEISKNPDLVYTDKSGRRNPEYISLGCDSVPVLRGRTPIQV 227
[Close]
BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Match: AT2G45880.1 (beta-amylase 7)

HSP 1 Score: 143.3 bits (360), Expect = 9.300e-35
Identity = 57/102 (55.88%), Postives = 78/102 (76.47%), Query Frame = 1 

		  

Query: 2   VDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQWV 61
           VD WWGI+E   P++Y+W  YR+LFQ+V++  LKIQ +MSFH+CGGNVGD V IPLP WV
Sbjct: 288 VDCWWGIVEGHSPQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWV 347

Query: 62  LDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQV 104
            ++ ++NPDI++T+  G RNPE LS G+D E +  GRT ++V
Sbjct: 348 AEIGRTNPDIYFTDREGRRNPECLSWGIDKERILRGRTALEV 389
[Close]
BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Match: AT3G23920.1 (beta-amylase 1)

HSP 1 Score: 140.2 bits (352), Expect = 7.800e-34
Identity = 56/102 (54.90%), Postives = 75/102 (73.53%), Query Frame = 1 

		  

Query: 1   MVDVWWGIIESKGPKQYDWKAYRRLFQVVQECGLKIQAIMSFHQCGGNVGDIVFIPLPQW 60
           M+DVWWG++E + P  Y+W  Y  L ++ ++ GLK+QA+MSFHQCGGNVGD V IPLPQW
Sbjct: 145 MIDVWWGLVEKESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQW 204

Query: 61  VLDVAKSNPDIFYTNLSGVRNPEYLSLGVDNEPLFGGRTPIQ 103
           V++    +PD+ YT+  G RN EY+SLG D  P+  GRTP+Q
Sbjct: 205 VVEEVDKDPDLAYTDQWGRRNHEYISLGADTLPVLKGRTPVQ 246
The following BLAST results are available for this feature:
BLAST of Spo22672.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902218508|gb|KNA18041.1|2.4e-5699.0hypothetical protein SOVF_0743... [more]
gi|731354862|ref|XP_010688831.1|9.0e-4885.4PREDICTED: beta-amylase-like [... [more]
gi|870850310|gb|KMT02421.1|9.0e-4885.4hypothetical protein BVRB_9g20... [more]
gi|731355703|ref|XP_010689279.1|4.5e-4783.3PREDICTED: beta-amylase-like [... [more]
gi|870850115|gb|KMT02261.1|4.5e-4783.3hypothetical protein BVRB_9g20... [more]
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BLAST of Spo22672.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9REX2_SPIOL1.6e-5699.0Beta-amylase OS=Spinacia olera... [more]
A0A0J8EHD8_BETVU6.3e-4885.4Beta-amylase OS=Beta vulgaris ... [more]
A0A0J8EGY4_BETVU3.1e-4783.3Beta-amylase OS=Beta vulgaris ... [more]
A0A0J8BBY7_BETVU6.9e-4781.5Beta-amylase OS=Beta vulgaris ... [more]
A0A0J8BBR4_BETVU6.9e-4781.5Beta-amylase OS=Beta vulgaris ... [more]
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BLAST of Spo22672.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AMYB_SOYBN5.8e-4778.6Beta-amylase OS=Glycine max GN... [more]
AMYB_MEDSA7.6e-4774.7Beta-amylase OS=Medicago sativ... [more]
AMYB_VIGUN7.6e-4776.7Beta-amylase OS=Vigna unguicul... [more]
AMYB_TRIRP2.2e-4674.7Beta-amylase OS=Trifolium repe... [more]
AMYB_IPOBA1.4e-4575.7Beta-amylase OS=Ipomoea batata... [more]
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BLAST of Spo22672.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G15210.12.2e-4473.7beta-amylase 5[more]
AT2G32290.11.7e-4169.9beta-amylase 6[more]
AT4G17090.13.4e-3761.1chloroplast beta-amylase[more]
AT2G45880.19.3e-3555.8beta-amylase 7[more]
AT3G23920.17.8e-3454.9beta-amylase 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001554Glycoside hydrolase, family 14PRINTSPR00750BETAAMYLASEcoord: 17..35
score: 4.0E-18coord: 39..60
score: 4.0
IPR001554Glycoside hydrolase, family 14PFAMPF01373Glyco_hydro_14coord: 1..102
score: 1.1
IPR013781Glycoside hydrolase, catalytic domainGENE3D3.20.20.80coord: 1..103
score: 7.8
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 1..103
score: 1.58
IPR018238Glycoside hydrolase, family 14, conserved sitePROSITEPS00506BETA_AMYLASE_1coord: 43..51
scor
NoneNo IPR availablePANTHERPTHR31352FAMILY NOT NAMEDcoord: 1..103
score: 3.9
NoneNo IPR availablePANTHERPTHR31352:SF5BETA-AMYLASE 5-RELATEDcoord: 1..103
score: 3.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0009611 response to wounding
biological_process GO:0009414 response to water deprivation
biological_process GO:0009723 response to ethylene
biological_process GO:0005982 starch metabolic process
biological_process GO:0009733 response to auxin
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005777 peroxisome
cellular_component GO:0009507 chloroplast
molecular_function GO:0016161 beta-amylase activity
molecular_function GO:0016629 12-oxophytodienoate reductase activity
molecular_function GO:0010181 FMN binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo057180.97Barchart | Table
Spo010490.71Barchart | Table
Spo189070.66Barchart | Table
Spo096190.65Barchart | Table
Spo168840.65Barchart | Table