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Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACATGACCCAGAAAGAGATTTCTGAAGGGTTTTCGATAATTGGCCATCAAAGTGTTTTCATTGAACTTTCTAGCACATACTCGAAACTTCACGAGTAATCACGACGGAAACAAAGAACATCATTTCAAGCCAACTCTGAAGACAAATCCAAAGCTGAATTTCTTTGTCATAAAATCGTCATAAAAATGGTCAGTTGCCCCTCTTCATTCACCCCTTCTTTTGGTTTTAATATTGTTCTTGTTTTTCTCACACTTTGAATTGTTCTCAATTTTTATGAATTATGATTGATAATTTTGCAAATGCTTGCTTAATTGTTGTGATATTGCATTAAAGTTATGAAAATTTCGTGAATTCAACTTCTGTAGAAGATTTGTGGCTGTTTTGGGTAAATTTTAACCTTTTGTTGCTTCGTTAAATCGGGTTTTTGTCTAAGATGTTTTTAATTTTATTTGGGGGAGATTAGGGTTTGAGTGATTTATTTTTTTATAATTACAGAAAATATTGAACGGGTCTATTTTTATTTTCTTGTTTTGGATATATCTGCTAGGGAATAAATCAGTGGTTTCTTTAGAGGATCCAATCGGTGTTAATTTGATCTGTTTTTTGCCAAATGATGAATTTCCCTTCCCATTATGTATTAAATTCGGATTAATGAGTTGTTTGTCTGCAATTCATGTGTAGTTTCATGAGAAAATTATGTGATTGCAATTTTGGTATTATGAATAATAAGCTAAATCTATAAACTGGGGATTTCTTGTTGAACTGGTTCAAATTTGAGGTGAATTGTGAGCTTCTGCTCAATAGCATCAAGCAGACAAGCACAATCTCCGCCTCACCACTACCATAAGGTAGTGAGGGGTGTGCCACATTCGGCTTGGGCATCCTTCTGTAAGGGTGGCTTGGTGGGAACTGTAAGGGTGGCTTGGTGGGAACTGTAAGGGTGGCTTGGTGGGGGATACGGACATCAGTGGGTTATGGACTCAGATTGGCCTTTGAATGTCCCACATATGTTGATACAACTATACCAGTCTATAACCAATCCCTAAAAATATGTGGGAGAGGAAGAGAGAGAGGGCATGTCTTCTGTAAGGCAATAGAGGTAGTTGGCTTGTACGAATGCAGCGGCTTTTTTTCCATTTTAATTCATCTTTTGGAGCAACCCTGTGCTTGTTTTGAGTAGCCGAGTACATTTTGAGGTGATTGGTTCATTGTAAAGAAACCAAAAACTTTGATCTCGAAGTATATATTGCATGAAGTGCTTTTGGATAAAGTTGTTTATTGTTGGTACTTGATCACATATTGTTATCAGTCTATGATTGCGAAACATCTTTGTGTTAAATTTCTTATCTTGTGATGCAAATGATAATTTTTACTTGAAAACCATGTCGACGAAATAGAGTGTTGATTATATTGTATAAGTGATCCTAAAATATAACAGTTTTCATTGCTAGATGGAAGTAAGGATTGTTTTGATCTATAATCTAGTTATATCAGTTTTCACATGTAATGTTTCCCTTTTTCGTTCTTTAGTTATGTCATTAGCATTTTGATTCAAAATTTTACCCTCATATGTGAAGAGTCCAAGGATGCACCAAATTTGCTGTATTTTATGTATGTTTTTATGTTTGAACAGTTTAAAGATACTTGCATTGTAATGTGGACCTTTCCTGCATTTGATTGTTTGTGATTTGAATTTATCATCCCGGTGAAGAACTCGTATTATGACATGTGAACTTTGAAACTTGGAATTAAATATTTAAATTATCATCCAGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTCCAACCCAAGATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGTAGTTATCAGTTGTATGATAACTTCTCAATTCTTGTGCATTTGAAGGTTTGCTGGTATTAGCCAAGAAGTTTCTCTATATCATAAATTCATGACCAAGCAAACATCCTAATGTCTGTGCACGGCTAATTACCTGGAGAACTAGTATAAGTTAAAAATTAACTACTAAAGAGTAAAGACAAAAAGGTACCTGTAAGATAGGTTATTACGGAGTATAAAAGTTGTCATAAAAGGTGAACTAACCTAAAATGAAGGGCAGAACCAGAGTAATAAATTGATTTGAAGCTATCCAGTAGAGCTCAATTCAAGCTTTTTTATCTCTTGAATCTAGCAATGTCATTGTTTCACTTCATTTTACTGAATTCTCACGACATAGTGAATTATATTTCGTTAGTTCTCATCATGTTGATCTGGAAGCAATTTTTATCAGTGTAGAAAATACTACTACTTTCATGTGATTATTTTTTCTGTCCTTGTTAATGTTAAGCCTTTTTTTGGTCAAATTCTTCTTTTACTTTAGGCAGGAAACGGTTTCTTATATTTGAACTTGAGCTTACCTACCGGACTTGTGTTCGCAGTCTCACAGAGACTATGGGTAGCTCAAATTTCCAATGTCCCTTCTTAAGTTCTACGTGACTCAAGTTATTTAACTTCTGGCCTAGAAATTTGTTTATCGTAGCATTTGTTGGTATTTTCTAGGTAACTGGACATATGTCCCATATTGCGGTAAGTACCTTGAATACTGCCATTTCTTTTACTTTATAGCTTTTGCCACTTAGCCGGGTTCAAAGAAGGTTAATGATCGCTTAGTTCAATTCCAAAGTGTTTCTTTTACTCTGTAATTTATTCACTTATTTGACCTTCTCTTCCCCCTTTCAATATCTTGTTATCTGTGTGTGTTCGATATCTATTATCTATAGTCTCTCATACATTCGAAGTATATGTTACCAAATATTTCAAATTTTGAAATGCAATGAATAATTGAAATGACCCTCAGCTTATTTCTTACTCGGTATTCATTTTATAAGGCTTTTTGTTCTGTTGTAGTTTGGCTGTTGTCATGTTTATCTTTTTCATTCTTTCTCTCCAAGTGTTAGTATTCAACATATTTGTATGAACCTTAAAATGGCAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGGAAGCCCAAAGACAGCGGCTCTGCCTTCTAATGCCATTTTATGTTGACCCTCGGATATAAGATTATTGTCTGTTCCTCTTCACCGAAACCATGGCTAAATGCCTACCCCTGTATGTTTAAAGTGAACCAAGGAACTCAGATGCCCTTCTCTTTAGATAAGGAAAGGTGATTGAGCATACACAGGTTGCAGTTGGCTGCAATTTTAGAACGTGTACACTATTTGACTGGTATAAGACAACAGTCACCAAAGCTATTGGATTTAAATGACACTGTTTTCTTGTCATGTTACTGTTATTTTAAGCTATTTGGAATATAAGCCTTAGGGAATTTTAACTTGTACTCCCGAGGTTTCCACGAACGTAGCATGTAAATAAAGCCAACGTTTGAGAAGTTTGAATACTCTTCGTACTTACTTTATGCTGTTTTAAATTATCAATAAAATTATATACTTGGTATTCCCACATGACCCAGAAAGAGATTTCTGAAGGGTTTTCGATAATTGGCCATCAAAGTGTTTTCATTGAACTTTCTAGCACATACTCGAAACTTCACGAGTAATCACGACGGAAACAAAGAACATCATTTCAAGCCAACTCTGAAGACAAATCCAAAGCTGAATTTCTTTGTCATAAAATCGTCATAAAAATGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTCCAACCCAAGATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGGAAGCCCAAAGACAGCGGCTCTGCCTTCTAATGCCATTTTATGTTGACCCTCGGATATAAGATTATTGTCTGTTCCTCTTCACCGAAACCATGGCTAAATGCCTACCCCTGTATGTTTAAAGTGAACCAAGGAACTCAGATGCCCTTCTCTTTAGATAAGGAAAGGTGATTGAGCATACACAGGTTGCAGTTGGCTGCAATTTTAGAACGTGTACACTATTTGACTGGTATAAGACAACAGTCACCAAAGCTATTGGATTTAAATGACACTGTTTTCTTGTCATGTTACTGTTATTTTAAGCTATTTGGAATATAAGCCTTAGGGAATTTTAACTTGTACTCCCGAGGTTTCCACGAACGTAGCATGTAAATAAAGCCAACGTTTGAGAAGTTTGAATACTCTTCGTACTTACTTTATGCTGTTTTAAATTATCAATAAAATTATATACTTGGTATTCC ATGGCAACACCATTATTTGCTGGGATTACTGTTGCTGCTGCTGCTCTTGCTGGTAGATATGGAATACAAGCTTGGCAAGCATTCAAGGCACGTCCGCCTAGACCTAAAAAGTTTTTTGTAGGTGGCTTCCAACCCAAGATGACCAAGAGGGAAGCGGCTCTTATCCTTGGCGTAAGGGAGAGTGCGGTTGCAGAGAAGGTGAAGGAAGCTCATAGAAGGGTAATGATTGCAAACCATCCGGATGCAGGTGGAAGCCATTATCTTGCCTCTAAAATCAATGAAGCTAAGGACATGATGGTCGGGAAGCCCAAAGACAGCGGCTCTGCCTTCTAA MATPLFAGITVAAAALAGRYGIQAWQAFKARPPRPKKFFVGGFQPKMTKREAALILGVRESAVAEKVKEAHRRVMIANHPDAGGSHYLASKINEAKDMMVGKPKDSGSAF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22735.1 vs. NCBI nr
Match: gi|902229373|gb|KNA21482.1| (hypothetical protein SOVF_042630, partial [Spinacia oleracea]) HSP 1 Score: 216.9 bits (551), Expect = 1.800e-53 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Spo22735.1 vs. NCBI nr
Match: gi|731318349|ref|XP_010669671.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 189.9 bits (481), Expect = 2.400e-45 Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = 1
BLAST of Spo22735.1 vs. NCBI nr
Match: gi|255577663|ref|XP_002529708.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Ricinus communis]) HSP 1 Score: 186.4 bits (472), Expect = 2.600e-44 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo22735.1 vs. NCBI nr
Match: gi|802639800|ref|XP_012078541.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Jatropha curcas]) HSP 1 Score: 184.9 bits (468), Expect = 7.700e-44 Identity = 91/112 (81.25%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo22735.1 vs. NCBI nr
Match: gi|18403957|ref|NP_565824.1| (mitochondrial import inner membrane translocase subunit TIM14-1 [Arabidopsis thaliana]) HSP 1 Score: 184.5 bits (467), Expect = 1.000e-43 Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRM9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_042630 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 1.300e-53 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVC2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g036500 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 1.700e-45 Identity = 92/110 (83.64%), Postives = 103/110 (93.64%), Query Frame = 1
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Match: B9SUN9_RICCO (Mitochondrial import inner membrane translocase subunit TIM14, putative OS=Ricinus communis GN=RCOM_0713680 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 1.800e-44 Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Match: A0A0D2VXH1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G094000 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.600e-43 Identity = 92/112 (82.14%), Postives = 102/112 (91.07%), Query Frame = 1
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Match: B9HLX8_POPTR (DNAJ heat shock N-terminal domain-containing family protein OS=Populus trichocarpa GN=POPTR_0008s04310g PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.000e-43 Identity = 89/112 (79.46%), Postives = 103/112 (91.96%), Query Frame = 1
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Match: TI141_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-1 OS=Arabidopsis thaliana GN=TIM14-1 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 6.300e-46 Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Match: TI143_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-3 OS=Arabidopsis thaliana GN=TIM14-3 PE=1 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 6.500e-43 Identity = 89/112 (79.46%), Postives = 99/112 (88.39%), Query Frame = 1
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Match: TI142_ARATH (Mitochondrial import inner membrane translocase subunit TIM14-2 OS=Arabidopsis thaliana GN=TIM14-2 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 2.300e-40 Identity = 85/112 (75.89%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Match: TIM14_BOVIN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3) HSP 1 Score: 107.1 bits (266), Expect = 1.300e-22 Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 1
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Match: TIM14_HUMAN (Mitochondrial import inner membrane translocase subunit TIM14 OS=Homo sapiens GN=DNAJC19 PE=1 SV=3) HSP 1 Score: 105.5 bits (262), Expect = 3.700e-22 Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 1
BLAST of Spo22735.1 vs. TAIR (Arabidopsis)
Match: AT2G35795.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 184.5 bits (467), Expect = 3.500e-47 Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 1
BLAST of Spo22735.1 vs. TAIR (Arabidopsis)
Match: AT5G03030.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 174.5 bits (441), Expect = 3.700e-44 Identity = 89/112 (79.46%), Postives = 99/112 (88.39%), Query Frame = 1
BLAST of Spo22735.1 vs. TAIR (Arabidopsis)
Match: AT3G09700.1 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 166.0 bits (419), Expect = 1.300e-41 Identity = 85/112 (75.89%), Postives = 94/112 (83.93%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22735.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22735.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22735.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22735.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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