Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCACACAAATTACAACAAATTGCGAAGGATTGGCTTACAGAAGCTTTCACCGTGATAACAATGTCTGCTTCTGCTCTGCTTTCTCCTCTCGGTATACTCCTTCTCTAGTTTTCTTTCCCCTATTAATTTAATTCGTGTTGTTTGATTCAATGTTACTTAATTCGCTAGTGCAGGATCGGGTATGGGAACACAATTCCCTAACTAATTTTGTAAGTAGGCCACAATGTACCACTTTCATGTTCACGGGTTTATGGGGAGATTAGAGAACTAATTTAACTAATTCTCTTTTTGGTATAATAGTTCCATATAATTTCCCCATTTTTTTTACTAAATTAACATGTACTTGGTAGTATTTTTTACTTGTGTTTGTTCATGTTCTTCAATGATTAAAATCCGATAGTGATGTTGTAGTTTTGTTAAAGCTAGAACAAATTTCACATTTTAATTTATGTGATTGACAGAAGTTAAGCCGATTTTTGTTATTTTTGACTCTTTCATTTCTTTCTTGTAAATTGTAATTTGATTTAGACTCCGTTTGGTAGGGTGTAAAACATTTTCATGGAAAACGATTTTCCCCTTTTCAATCATTTTACCTTTTCAATCATTTTACGTTGTTTGGTTGGGTAAGGGATGAAAAACAATTTTCCATGACTCCCTCAAAGTTGGAAAATCATTTTCCATTTGGAAGGTAGGGAAACCACTTTTCCTTCTTTCCTCCTTACCTCCCTCTCCTTTCTTCCCTTCAATCTTCACCATCTTCTCCCATTTTCCTTTAAAGTACCAAACAAAGGAAAACTAGTTTGGAATTGTGTTTTCCGTTGAAAAATGTTTTCCATGGAAAATCATTTTACAATGAAAATGTTTTACGCCTTACCAAACGGAGCCTTAGCATGTGCTCAATAAGTTGAGCTAGAGTGGAAATAAAAGTCACATAATTAGTCATCATATCAATTTCTCTCGATCTTGTGACTTGGGTATTTCAGCAAAGTGACTGCATTCTGCTCATTGAAACAGCTTAGAATACTGAAAAAGTTTGTGGTGTTTTTGTTAGTTTGGGTATTAAAACCAGCTTTGACATATTCATAATTTGGGTCCTTTTTAACAGCTATTCTGTTAATATGGGTGTTTTTGCAGCTTTAAGTGGTTCCATTAATCTTCATACCAAGGCAAAACAGACTGCACAAAGTCTTATAATTCGATGTTCAAAAACGAGACATGGATCTGTGGAAGGCACTAGATTCAATCTGTATAATCGTAGGAATGTTGTTGGATCGCTACTTGGACTTTCTTGTCTCAGAATAGACTTCAATGAGGCTAAAGCTGCAGGCTTGCCTCCAGAGGAGAAGCCAAAACTATGTGATGCAGCCTGTGAGAAGGAGCTTGAAAATGTAGGTGAGATTACTTTCCCTTTTTACTTGGAATTTTACAGCTTCTTTTGCCTGTTTTCAATGATACAAATCGCTGTTTTTGTATGGCCTGCTTTTGCTGATGCATATATTGTTGTAATCATTGAGCGGCGTAAGATTAATCTACATTTTCAGATCATTAGTTTTCTTGCTATTCTTCACAACATTCTACTCCGATGGAATACCATGGTTCAGTCCTTTATTTGTGTCAAAATCTCTGTGATATGTTCCTTCCCTAAAACCATAGATGAGCTCTGAACATATTGGACACTTGAGAGTTGATGCAAATAATGCATGATAAAAGTTCGATTTAGTATTCCAATACCTTCACGGCCCGTTTGGTAGTCGGCCATAAATGGTGTCCATGGGAATGTATTTGTATGTAAATTTGTTAAGAAAATCAACTTGCATTCCCATGGTAATGCTAGTTCACTCAAAATAATCTATTTTTCTTTATAAATTTCCATTGCCATCCATTACCATTTGATGAGTGGTATTAGGTGGGAATGCAAATTTATGAAGAAAAACACTAAGTTTGAGTCAAAATTTCATTACCATGGACATCATCATGTTCTTTTCTTGTCAAATAACACTTGAATTTATTCTCATTCCCACAATTTAATACCGGCTACCAAACGGGCTGTCAAGGCACAGAACATTCATTACTTAAAAGTCAACCCATGGTGAAACTAAAAGGGTGTGGAGTTGCCAATTAAGTTTTGGATATTTCCTGTAATCCATGTTACAATTCACTCTATTCTTGTTAAATCCTGTATTCTGATGTTGATGTGAACAGGCTGACAGGCGTCGAAAGATATGAGAGAAACTACAAGATTCACCAACAATTTTAAATTTCTTTTACCAGCTGATTAACTACTTAACTGAGGTCATCCATTTCTAACATAACTCACTGTGTCAGAATGGTAAAAGGAGAATTTCTTTTGTGAGCTATAACCATGAACTGATGTCAAACCTATTACTAGCCAAAAAAACTTGTTAGCTTCATCAGAATTTAGATAGATAGCTAAATTTATGGTCATAGTATGTATTGCATATGGATCTTCCTTTATGTTTTTTAAGGTTGTTAAAATTGCCTCTTGTATTGAAGGTACCCATGGTTACCACAGAATCTGGATTGCAGTATAAAGACATCAAGATGGGTGAAGGTCCGAGTCCACCAATTGGCTTTCAGGTATATGTCAGGAAAGTTCTCTCTTAACCTGCAAAGTTGTAAATAAGTATACTGGTAATGTATTGTCCTAAATAGAAGTGTCACGCAGAAATGTTGAACTAGGCCAACATTCTGTATCTATCAAAAGTTCAAAACTAAAGAATTTTATTGTTGCTGTATGTGACAAATTAGCTTGCTTTTACAGACTCCTTTTCTTATTGTTTTCGTGTGACTTATTTGACTGCAGGTTGCTGCAAATTATGTTGCAATGGTTCCTTCCGGACAGATTTTTGACAGGTAATAACAATAGTATACAATTTTTAATCATGTAATTCCATTCAATTAATAAAATATACAATCAAGTTATCTTCAAATATTTTAGCATGTCTTGTTCCTTTGCAAAACACCATCCTTGAAACTTCTTCTGATGATCTTGGACACTATTCAATAGAATCACTGTAAGCATGAGTTGTTAATTACTGAACCTATTTTTGCAGTTCACTTGAGAAGAATCAGCTTTACATCTTTCGAGTCGGCTCTGGCCAGGTAATTAGCTTGCCTTATACTTGAGGTGATTCAGATTAAATGTGATGCTAAATATTGTTAAATGCTAAAACAGGTGATCAAGGGACTTGACGAAGGACTCCTTAGCATGAAAGCTGGTGGTAAAAGACGACTCTACATTCCAGGACCGGTAAGCATTTCACTACCTATCTTTTCATCCCGCCTTATTGCATATCTACTCAACATTCTTACTACATTTTTAAGGTTTTGGCCTTGTAATTTGTAAATCAAAAACTAGTCTCCCATTCGGCAAGTAACCTGTGAAGTTGGTCATATGTGAGTGGTGTGTTGCTGTAAGAAGTATAGTTTGCTACTTAGTCTCAGAAAAGCTTACTCTATTTATTTTCCGTTGTTGTAATGTACTGAGCAGTTGGCATTCCCGAAAGGCCTGACCTCAGCTCCTGGAAGGCCACGTGTTGCGCCAAATAGTCCTGTTATCTTTGATGTAAGCTTGGAGTACATACCGGGAATGGAGATAGATATAGAAGAATAGTAATTGTTCAACTTCAACATTTTATTACATGCCCTTCAAATGTGTATAAAATCAGCTTATTCTTGAATTGGATGTGTCATGTGTGTATTTACATTTGTCAATTTTGCAACTATAGTGATAATACATCTTCCACCAGTTGCCAAAGTTTTTCCGTCTGATTATGATCACCATTTCCAGAA TTCACACAAATTACAACAAATTGCGAAGGATTGGCTTACAGAAGCTTTCACCGTGATAACAATGTCTGCTTCTGCTCTGCTTTCTCCTCTCGCTTTAAGTGGTTCCATTAATCTTCATACCAAGGCAAAACAGACTGCACAAAGTCTTATAATTCGATGTTCAAAAACGAGACATGGATCTGTGGAAGGCACTAGATTCAATCTGTATAATCGTAGGAATGTTGTTGGATCGCTACTTGGACTTTCTTGTCTCAGAATAGACTTCAATGAGGCTAAAGCTGCAGGCTTGCCTCCAGAGGAGAAGCCAAAACTATGTGATGCAGCCTGTGAGAAGGAGCTTGAAAATGTACCCATGGTTACCACAGAATCTGGATTGCAGTATAAAGACATCAAGATGGGTGAAGGTCCGAGTCCACCAATTGGCTTTCAGGTTGCTGCAAATTATGTTGCAATGGTTCCTTCCGGACAGATTTTTGACAGTTCACTTGAGAAGAATCAGCTTTACATCTTTCGAGTCGGCTCTGGCCAGGTGATCAAGGGACTTGACGAAGGACTCCTTAGCATGAAAGCTGGTGGTAAAAGACGACTCTACATTCCAGGACCGTTGGCATTCCCGAAAGGCCTGACCTCAGCTCCTGGAAGGCCACGTGTTGCGCCAAATAGTCCTGTTATCTTTGATGTAAGCTTGGAGTACATACCGGGAATGGAGATAGATATAGAAGAATAGTAATTGTTCAACTTCAACATTTTATTACATGCCCTTCAAATGTGTATAAAATCAGCTTATTCTTGAATTGGATGTGTCATGTGTGTATTTACATTTGTCAATTTTGCAACTATAGTGATAATACATCTTCCACCAGTTGCCAAAGTTTTTCCGTCTGATTATGATCACCATTTCCAGAA ATGTCTGCTTCTGCTCTGCTTTCTCCTCTCGCTTTAAGTGGTTCCATTAATCTTCATACCAAGGCAAAACAGACTGCACAAAGTCTTATAATTCGATGTTCAAAAACGAGACATGGATCTGTGGAAGGCACTAGATTCAATCTGTATAATCGTAGGAATGTTGTTGGATCGCTACTTGGACTTTCTTGTCTCAGAATAGACTTCAATGAGGCTAAAGCTGCAGGCTTGCCTCCAGAGGAGAAGCCAAAACTATGTGATGCAGCCTGTGAGAAGGAGCTTGAAAATGTACCCATGGTTACCACAGAATCTGGATTGCAGTATAAAGACATCAAGATGGGTGAAGGTCCGAGTCCACCAATTGGCTTTCAGGTTGCTGCAAATTATGTTGCAATGGTTCCTTCCGGACAGATTTTTGACAGTTCACTTGAGAAGAATCAGCTTTACATCTTTCGAGTCGGCTCTGGCCAGGTGATCAAGGGACTTGACGAAGGACTCCTTAGCATGAAAGCTGGTGGTAAAAGACGACTCTACATTCCAGGACCGTTGGCATTCCCGAAAGGCCTGACCTCAGCTCCTGGAAGGCCACGTGTTGCGCCAAATAGTCCTGTTATCTTTGATGTAAGCTTGGAGTACATACCGGGAATGGAGATAGATATAGAAGAATAG MSASALLSPLALSGSINLHTKAKQTAQSLIIRCSKTRHGSVEGTRFNLYNRRNVVGSLLGLSCLRIDFNEAKAAGLPPEEKPKLCDAACEKELENVPMVTTESGLQYKDIKMGEGPSPPIGFQVAANYVAMVPSGQIFDSSLEKNQLYIFRVGSGQVIKGLDEGLLSMKAGGKRRLYIPGPLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGMEIDIEE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22857.1 vs. NCBI nr
Match: gi|902236200|gb|KNA24264.1| (hypothetical protein SOVF_017240 [Spinacia oleracea]) HSP 1 Score: 424.5 bits (1090), Expect = 1.200e-115 Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 1
BLAST of Spo22857.1 vs. NCBI nr
Match: gi|731323172|ref|XP_010672286.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 369.8 bits (948), Expect = 3.400e-99 Identity = 187/222 (84.23%), Postives = 199/222 (89.64%), Query Frame = 1
BLAST of Spo22857.1 vs. NCBI nr
Match: gi|568850176|ref|XP_006478801.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Citrus sinensis]) HSP 1 Score: 309.3 bits (791), Expect = 5.400e-81 Identity = 158/225 (70.22%), Postives = 180/225 (80.00%), Query Frame = 1
BLAST of Spo22857.1 vs. NCBI nr
Match: gi|567900788|ref|XP_006442882.1| (hypothetical protein CICLE_v10021893mg [Citrus clementina]) HSP 1 Score: 309.3 bits (791), Expect = 5.400e-81 Identity = 158/225 (70.22%), Postives = 180/225 (80.00%), Query Frame = 1
BLAST of Spo22857.1 vs. NCBI nr
Match: gi|659108212|ref|XP_008454077.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 308.5 bits (789), Expect = 9.200e-81 Identity = 159/221 (71.95%), Postives = 179/221 (81.00%), Query Frame = 1
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZA8_SPIOL (Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_017240 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 8.000e-116 Identity = 217/225 (96.44%), Postives = 219/225 (97.33%), Query Frame = 1
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPX5_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g057940 PE=4 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 2.400e-99 Identity = 187/222 (84.23%), Postives = 199/222 (89.64%), Query Frame = 1
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Match: V4TRS4_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10021893mg PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 3.800e-81 Identity = 158/225 (70.22%), Postives = 180/225 (80.00%), Query Frame = 1
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KTT9_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_4G011040 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.400e-80 Identity = 160/225 (71.11%), Postives = 179/225 (79.56%), Query Frame = 1
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Match: D7T2A7_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_05s0094g00100 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.800e-78 Identity = 153/200 (76.50%), Postives = 171/200 (85.50%), Query Frame = 1
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Match: FK163_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana GN=FKBP16-3 PE=1 SV=2) HSP 1 Score: 280.0 bits (715), Expect = 2.200e-74 Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 1
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.200e-21 Identity = 57/123 (46.34%), Postives = 77/123 (62.60%), Query Frame = 1
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Match: FKBP4_RHIO9 (FK506-binding protein 4 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=FKBP4 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-16 Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 1
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Match: FKBP4_CRYNB (FK506-binding protein 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=FPR4 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.300e-15 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 1
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Match: FKBP4_CRYNJ (FK506-binding protein 4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=FPR4 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.300e-15 Identity = 55/144 (38.19%), Postives = 78/144 (54.17%), Query Frame = 1
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 280.0 bits (715), Expect = 1.200e-75 Identity = 151/222 (68.02%), Postives = 177/222 (79.73%), Query Frame = 1
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Match: AT5G45680.1 (FK506-binding protein 13) HSP 1 Score: 75.1 bits (183), Expect = 6.100e-14 Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Match: AT4G39710.1 (FK506-binding protein 16-2) HSP 1 Score: 74.3 bits (181), Expect = 1.000e-13 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Match: AT5G05420.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 65.1 bits (157), Expect = 6.300e-11 Identity = 42/109 (38.53%), Postives = 65/109 (59.63%), Query Frame = 1
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 64.3 bits (155), Expect = 1.100e-10 Identity = 37/111 (33.33%), Postives = 57/111 (51.35%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22857.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22857.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22857.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22857.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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