Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTCATGTCACTTTCTTTAAATCTATTGTACTACTTTTGAATTTTGTCTCCGTCCCTATAATTTTAAAAGGACCCAAACGTGAGAACCTTTCATTTACCCATTTTTATTATCATCATATGAATTTATAATTATGATCTTCCCAACTCGAAAACCCTTTCCTTTTCCCTTCTTCCTGTTCTAGCAAAAAAACAGAGGAGAGTAATTTGAAGAAGAAAAAAGTGTAAATATCATGTATTCTGGTTCATTTCTTTCTGGATTTTATTGTTGGGGATGGGAATTTTTAACTGCCCTTTTGCTTTTTAGTTCTTCTTCTTCCTTCTAAATCTCCAATCTTTGATCTTTCTAGATTAAATTAGAGTAATTTTAGGAATTTTTTATATTTTAATTAAAACAGGGGAAAACAGGGTGTGTTTTTATAAATTAAATAGTTTAATTAATTAGTAATATAAAAAAAATGGGGCAAAGGTCATTGCCGGCGCCATTTTTGACGAAGACGTATGAGATGGTAGATGATTCAAATTCAGATGATGTGATTTCATGGGGTGAGAAAGGAACTACCTTTGTTGTTTGGAAAACTGCTGACTTTGCTAAGGATTTGCTTCCTAAATACTTCAAGCATAATAATTTCTCTAGCTTCGTTCGCCAGCTTAACACCTATGTAAGTCTTCTTCCCCTATTTTTTAAATCCTCGTCTTGTTAATAGTCACGTTGATAGTGTAATTCTGAAAATGAAATCCAAAAATCGAAAGAGGTGGCTTTTATTCAAATTTATCCTTGAGTTACATGAGTGTTTATATTGGCCATTCATTTTCAATCAATATTTTCTACAGTAATTCGTATCATTATAATTACATTCCGGCCTCATTTGATAGCCGATAATAAAGGGTGGGAATGAGAATAAATCTAAGTGAAATTTGACAAAAAAAAATAGGATCATGATGTCCTTGTTAATGAAATGTTGTCTCAAATTTGCAATTTTCTTCATAAATTTTCATTCCTAAGTCCTAACTAATACCACTTCTCAAATGATAATAAAGGATAATAAAAATTTATAAAGAAAAATAGATAATTTTGAGTGAACTAGTATTACCGTGAAAATAATATCGAAGTATAAATTTTCCTTACAAATTTACATAGAAGTATAAATATATACCCATTGACGCAATTTATGACCTGCGTCGGTTTGATTACAATTATTAATAATATTTACATGCTACAAGAGTACCATTACAATTAGTACATGTTTGGTATGGATTTAAGAAATACTCCATGGAAACGGATAAGAAGAAGAGGAAAGAATAATGTTAATCATTAACATCATTGGTTGTTTGATATAACTTAGAAAATGAATCAAATTGAGGAATAAGGAGGGTAATATTCTTCTTACAGAGAGTTACAAATGATGATAAGAGTTATATTTAAGTACTGATGTCATACCAAAATTAGATAATCAAAATATCTAATTGATTTCATTTCTATCACTGAAAAATTGAAAATATATATAGCAAAAATTATGGTAGGAATGTAGGATGTCCGTTTATACAGCTTTATCCTTTTATTTATTTATTTATTTATTTATTTAATTGCACTAGTTTCCTTATTTGAAAGTTATACTCCGTACTACACTACTACGTACATGAGTTGCATTATTTCCCTTTGTTGCATACAAATTGTCTATTTACAATTCTTACTTGACCTTTTTTCACTCTTGTTTTTTCCCATCACAATAGCATATTTTATATGTACTCTATTGTCTATTCCTTAATGTTTGTACCGACTTAAATGGTACAATAATGTTAAGAAAAAGAATAGAAGAAGTATATCACTAATACATACACATGGATGTACAATTTAAATAAAAAGAATTCTATATATTTCAAAATTTCAATGGTAAATATAGAATATAAATATAAACAAGGATAAATTGAGTACTTCGTATTTTGTAGGTGAACATGCGAAGAAACGAGCGAAAACATACCATAAAAGAAAATAGATCATTTACTACAATTAATGTACATTGTTTAAATTTTAAATAAGACAGATAGGAAAATTACAAAAATAAAGTTGGATATGACCAAAAAAAACTTGGAGAACTACTATTTATGTGGGTTGTTTCAATTGATTTTCACTTACTTTTTTTTTCCTGTATTTATATTATCTGAACTTACTTATACAATTTGTACTTTTTAAAGACGCAAAATGTTGATTGGTTTCAAATGTTAATCTAGGAGATTGACAAAATCATACAAGAAATTAATTACTCGTATACTCTTATTTAAGATAGATTTACCGAGACTTTTCTAGTCTTTGCTCTCATTCTTGGTGTCCCAAAATCAATTCCCGAGCGAAGATTATAAGGAAAGTGACATCTCTGCTTGACTGAGTACAAACTTGCTGATAACATTACCAAAGTTTTGTCAAATGTCAAAATTCGCATATCATTTATTCAATGCAATACTAAAGGAAGTATCATGTGAAAATTTCATGCAACATTACAAAAGTGTAGGCAATTGTTCATTTTCACCGTAATTTCCAAAAAGACGGCGCAGAGTTGACTAACATGAAGGTATTTGTTTGAAAAAATTCAGGGATTCCGCAAAATTGTGCCGGACAAATGGGAATTTGCCAACGACAGCTTCAAGAGAGAACAGAAAGAACTCCTTTCAGAAATACGCCGGCGGAAGGCAACACTCGCCGGTAAGATTACCTCCACCGGTGGCGGTGGCGGTGGTGGTTCTCAGTCTGTTTCAGGGGACGACGCGGGGTCCACATCCACCTCATCACCGGGTTCTATTGAGATAGCGGATTTATCGGGGGAGAACGAGAAATTGAGACGAGATAACGAGATGCTGAACTCGGAACTTGTTCAGACAAAGAAGCAATGTGAAGAGCTAATGGGCTTTCTTTCGGCCCATTTCAAAGTGGGCCCTGATCAGATCAACCATATCCTACAGCAAGGAGTGGTGGTGGACAACGTTGCGCGTGGGTCCCGCAAAGATGAGGTAGGTGGCGAGGATGACTTTGGTGGTGTTGATGATGATGATGATGATGANCCCGCAAAGATGAGGTAGGTGGCGAGGATGACTTTGGTGGTGTTGATGATGATGATGATGATGATGATGACGACGATGAAGATGGAGATGAAAAAGAAGGTTTGAAATTGTTTGGTGTTTGGTTGAAAGAAGTTGGTGAGGTGGAAAATGGGAAGAAAAGAGGGAGATGTTATNTTTGGTGTTTGGTTGAAAGAAGTTGGTGAGGTGGAAAATGGGAAGAAAAGAGGGAGATGTTATCATTTTGAAGGGGACAATAAATCCAATTTGGGCTTTAATGCGGCCCAATGTCGTCAAAAGGTTATGAAAATTCTTTGAAGAGTTGTGTGACGTGTTATGTGGGTTAGTTTAATATTCGTGATTTAGNTATGAAAATTCTTTGAAGAGTTGTGTGACGTGTTATGTGGGTTAGTTTAATATTCGTGATTTAGAAATGTTTTACACAAGAAGAAAGGCTAAAAAAGGCATGTATAGTGTGCTTGTATAATTGTATTTATAAAGTTTGTTTGGTGAAACTTATGAAGAACTATTGCTAATATTAATAAACTTGGAAACCTGCTTAATGATCGGACTTTGATACCAAATATTTTAATGATTTTTTAT TTTGTCATGTCACTTTCTTTAAATCTATTGTACTACTTTTGAATTTTGTCTCCGTCCCTATAATTTTAAAAGGACCCAAACGTGAGAACCTTTCATTTACCCATTTTTATTATCATCATATGAATTTATAATTATGATCTTCCCAACTCGAAAACCCTTTCCTTTTCCCTTCTTCCTGTTCTAGCAAAAAAACAGAGGAGAGTAATTTGAAGAAGAAAAAAGTGTAAATATCATGTATTCTGGTTCATTTCTTTCTGGATTTTATTGTTGGGGATGGGAATTTTTAACTGCCCTTTTGCTTTTTAGTTCTTCTTCTTCCTTCTAAATCTCCAATCTTTGATCTTTCTAGATTAAATTAGAGTAATTTTAGGAATTTTTTATATTTTAATTAAAACAGGGGAAAACAGGGTGTGTTTTTATAAATTAAATAGTTTAATTAATTAGTAATATAAAAAAAATGGGGCAAAGGTCATTGCCGGCGCCATTTTTGACGAAGACGTATGAGATGGTAGATGATTCAAATTCAGATGATGTGATTTCATGGGGTGAGAAAGGAACTACCTTTGTTGTTTGGAAAACTGCTGACTTTGCTAAGGATTTGCTTCCTAAATACTTCAAGCATAATAATTTCTCTAGCTTCGTTCGCCAGCTTAACACCTATGGATTCCGCAAAATTGTGCCGGACAAATGGGAATTTGCCAACGACAGCTTCAAGAGAGAACAGAAAGAACTCCTTTCAGAAATACGCCGGCGGAAGGCAACACTCGCCGGTAAGATTACCTCCACCGGTGGCGGTGGCGGTGGTGGTTCTCAGTCTGTTTCAGGGGACGACGCGGGGTCCACATCCACCTCATCACCGGGTTCTATTGAGATAGCGGATTTATCGGGGGAGAACGAGAAATTGAGACGAGATAACGAGATGCTGAACTCGGAACTTGTTCAGACAAAGAAGCAATGTGAAGAGCTAATGGGCTTTCTTTCGGCCCATTTCAAAGTGGGCCCTGATCAGATCAACCATATCCTACAGCAAGGAGTGGTGGTGGACAACGTTGCGCGTGGGTCCCGCAAAGATGAGGTAGGTGGCGAGGATGACTTTGGTGGTGTTGATGATGATGATGATGATGATGATGACGACGATGAAGATGGAGATGAAAAAGAAGGTTTGAAATTGTTTGGTGTTTGGTTGAAAGAAGTTGGTGAGGTGGAAAATGGGAAGAAAAGAGGGAGATGTTATCATTTTGAAGGGGACAATAAATCCAATTTGGGCTTTAATGCGGCCCAATGTCGTCAAAAGGTTATGAAAATTCTTTGAAGAGTTGTGTGACGTGTTATGTGGGTTAGTTTAATATTCGTGATTTAGNTATGAAAATTCTTTGAAGAGTTGTGTGACGTGTTATGTGGGTTAGTTTAATATTCGTGATTTAGAAATGTTTTACACAAGAAGAAAGGCTAAAAAAGGCATGTATAGTGTGCTTGTATAATTGTATTTATAAAGTTTGTTTGGTGAAACTTATGAAGAACTATTGCTAATATTAATAAACTTGGAAACCTGCTTAATGATCGGACTTTGATACCAAATATTTTAATGATTTTTTAT ATGGGGCAAAGGTCATTGCCGGCGCCATTTTTGACGAAGACGTATGAGATGGTAGATGATTCAAATTCAGATGATGTGATTTCATGGGGTGAGAAAGGAACTACCTTTGTTGTTTGGAAAACTGCTGACTTTGCTAAGGATTTGCTTCCTAAATACTTCAAGCATAATAATTTCTCTAGCTTCGTTCGCCAGCTTAACACCTATGGATTCCGCAAAATTGTGCCGGACAAATGGGAATTTGCCAACGACAGCTTCAAGAGAGAACAGAAAGAACTCCTTTCAGAAATACGCCGGCGGAAGGCAACACTCGCCGGTAAGATTACCTCCACCGGTGGCGGTGGCGGTGGTGGTTCTCAGTCTGTTTCAGGGGACGACGCGGGGTCCACATCCACCTCATCACCGGGTTCTATTGAGATAGCGGATTTATCGGGGGAGAACGAGAAATTGAGACGAGATAACGAGATGCTGAACTCGGAACTTGTTCAGACAAAGAAGCAATGTGAAGAGCTAATGGGCTTTCTTTCGGCCCATTTCAAAGTGGGCCCTGATCAGATCAACCATATCCTACAGCAAGGAGTGGTGGTGGACAACGTTGCGCGTGGGTCCCGCAAAGATGAGGTAGGTGGCGAGGATGACTTTGGTGGTGTTGATGATGATGATGATGATGATGATGACGACGATGAAGATGGAGATGAAAAAGAAGGTTTGAAATTGTTTGGTGTTTGGTTGAAAGAAGTTGGTGAGGTGGAAAATGGGAAGAAAAGAGGGAGATGTTATCATTTTGAAGGGGACAATAAATCCAATTTGGGCTTTAATGCGGCCCAATGTCGTCAAAAGGTTATGAAAATTCTTTGA MGQRSLPAPFLTKTYEMVDDSNSDDVISWGEKGTTFVVWKTADFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANDSFKREQKELLSEIRRRKATLAGKITSTGGGGGGGSQSVSGDDAGSTSTSSPGSIEIADLSGENEKLRRDNEMLNSELVQTKKQCEELMGFLSAHFKVGPDQINHILQQGVVVDNVARGSRKDEVGGEDDFGGVDDDDDDDDDDDEDGDEKEGLKLFGVWLKEVGEVENGKKRGRCYHFEGDNKSNLGFNAAQCRQKVMKIL Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22916.1 vs. NCBI nr
Match: gi|731373326|ref|XP_010666616.1| (PREDICTED: heat shock factor protein HSF24 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 409.5 bits (1051), Expect = 4.900e-111 Identity = 211/283 (74.56%), Postives = 242/283 (85.51%), Query Frame = 1
BLAST of Spo22916.1 vs. NCBI nr
Match: gi|595805954|ref|XP_007202372.1| (hypothetical protein PRUPE_ppa009274mg [Prunus persica]) HSP 1 Score: 296.2 bits (757), Expect = 6.100e-77 Identity = 171/295 (57.97%), Postives = 209/295 (70.85%), Query Frame = 1
BLAST of Spo22916.1 vs. NCBI nr
Match: gi|645272561|ref|XP_008241456.1| (PREDICTED: heat shock factor protein HSF24 [Prunus mume]) HSP 1 Score: 293.9 bits (751), Expect = 3.000e-76 Identity = 168/291 (57.73%), Postives = 207/291 (71.13%), Query Frame = 1
BLAST of Spo22916.1 vs. NCBI nr
Match: gi|1009145100|ref|XP_015890148.1| (PREDICTED: heat shock factor protein HSF24 [Ziziphus jujuba]) HSP 1 Score: 285.4 bits (729), Expect = 1.100e-73 Identity = 162/260 (62.31%), Postives = 191/260 (73.46%), Query Frame = 1
BLAST of Spo22916.1 vs. NCBI nr
Match: gi|590704764|ref|XP_007047250.1| (Heat shock factor 4 [Theobroma cacao]) HSP 1 Score: 284.6 bits (727), Expect = 1.800e-73 Identity = 167/264 (63.26%), Postives = 192/264 (72.73%), Query Frame = 1
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B452_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003250 PE=3 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 3.400e-111 Identity = 211/283 (74.56%), Postives = 242/283 (85.51%), Query Frame = 1
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Match: M5VRF1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009274mg PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.200e-77 Identity = 171/295 (57.97%), Postives = 209/295 (70.85%), Query Frame = 1
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Match: A0A061DGX9_THECC (Heat shock factor 4 OS=Theobroma cacao GN=TCM_000610 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 1.300e-73 Identity = 167/264 (63.26%), Postives = 192/264 (72.73%), Query Frame = 1
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Match: D7SVY0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00670 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 2.800e-73 Identity = 166/272 (61.03%), Postives = 194/272 (71.32%), Query Frame = 1
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Match: A0A0N7DK45_9ROSI (Heat shock transcription factor B1 OS=Populus simonii GN=HsfB1 PE=2 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 1.800e-72 Identity = 171/286 (59.79%), Postives = 198/286 (69.23%), Query Frame = 1
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 7.200e-70 Identity = 166/276 (60.14%), Postives = 190/276 (68.84%), Query Frame = 1
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.300e-63 Identity = 147/287 (51.22%), Postives = 188/287 (65.51%), Query Frame = 1
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Match: HSFB1_ORYSJ (Heat stress transcription factor B-1 OS=Oryza sativa subsp. japonica GN=HSFB1 PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.900e-46 Identity = 119/265 (44.91%), Postives = 159/265 (60.00%), Query Frame = 1
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 8.000e-45 Identity = 99/202 (49.01%), Postives = 127/202 (62.87%), Query Frame = 1
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.200e-42 Identity = 95/193 (49.22%), Postives = 121/193 (62.69%), Query Frame = 1
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Match: AT4G36990.1 (heat shock factor 4) HSP 1 Score: 244.6 bits (623), Expect = 7.400e-65 Identity = 147/287 (51.22%), Postives = 188/287 (65.51%), Query Frame = 1
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Match: AT5G62020.1 (heat shock transcription factor B2A) HSP 1 Score: 174.1 bits (440), Expect = 1.200e-43 Identity = 95/193 (49.22%), Postives = 121/193 (62.69%), Query Frame = 1
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 171.4 bits (433), Expect = 8.000e-43 Identity = 100/231 (43.29%), Postives = 133/231 (57.58%), Query Frame = 1
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Match: AT1G46264.1 (heat shock transcription factor B4) HSP 1 Score: 159.5 bits (402), Expect = 3.100e-39 Identity = 70/99 (70.71%), Postives = 85/99 (85.86%), Query Frame = 1
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Match: AT1G32330.1 (heat shock transcription factor A1D) HSP 1 Score: 149.8 bits (377), Expect = 2.500e-36 Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22916.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22916.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22916.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo22916.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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