Spo22927 (gene)

Overview
NameSpo22927
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionGATA transcription factor 16
Locationchr4 : 20811780 .. 20812760 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAATGTTTAGAAATTAATGTGGGTCCAATATCCTGAAATGTCTAGAACTTCGCGCCTTTAAGCTTCACCATCACCGAGCCGCTTAGGTCGGTTTTCATCTCTCCCTCCAAATTCCACCTTATAATCCTCATTTAATCCCACCTCTTCAACCCTTTATTCAAAATTCCCCCTAAAAATATTTAGGCAAGATTTAGGGTTCATCAATTCCTCATTGAAAAACCCACCTAATTTTGATCATAATTGAAGAATTAAAGTGGAAACTGAAATAAAATGAATGAGTTCAAGAAAATCTGTGCTGATTGCAAAACCACAAGAACTCCACTGTGGAGAAGTGGTCCTCATGGTCCTAGGGTATTAAATCAGAACCAGATCTTTTCTTTGATTACCTTTAATTTAAACAAATTTGAATTAGTTATTCTAATTGAATTGAATTTCTGGGTAAATTTCATTTTTTTTTGTGTGTGCAGTCACTCTGTAATGCTTGTGGAATCAAATACAGGAAGAAGAAGATGGCTGATGACGAACAACACCAACACCAACAACAAAGACAACCCAGTTCAGAAACCAGGAGAGAGAAACAATCAAGCAGCAGAAGTGGTGATTATGATGAAAATCGAGTGAATGATCAGGTCTTGAAAAGGGGTTATAGTAATATGGGAAACAGGATATTTGCTCAACGATCATCTTTGTCGTCTTCTTCGTCTTCGTCTTCACAGTTGAAGAAACAGAGAAGTAGCAGTGAAGAGAGTAGTATCACCATCAATAGTAAGAGAAGTTTGGGGGAGGTGGAACAAGCTGCTGTATTGCTCATGTCTTTGTCTTGTGGTTCTTGTTTTGCTTAATTACACGATCAAAATGACTTAGTTATATAGGAATTATTACTATGTTTGTTGGTTGTTGGGTTTTGTTTGATGTGGGAGGGGATTTAGTGAAGAATGTTTAGGCAAAATGATAGTGACAAAAGGTGCTAATTATTTG

mRNA sequence

ATTAAATGTTTAGAAATTAATGTGGGTCCAATATCCTGAAATGTCTAGAACTTCGCGCCTTTAAGCTTCACCATCACCGAGCCGCTTAGGTCGGTTTTCATCTCTCCCTCCAAATTCCACCTTATAATCCTCATTTAATCCCACCTCTTCAACCCTTTATTCAAAATTCCCCCTAAAAATATTTAGGCAAGATTTAGGGTTCATCAATTCCTCATTGAAAAACCCACCTAATTTTGATCATAATTGAAGAATTAAAGTGGAAACTGAAATAAAATGAATGAGTTCAAGAAAATCTGTGCTGATTGCAAAACCACAAGAACTCCACTGTGGAGAAGTGGTCCTCATGGTCCTAGGTCACTCTGTAATGCTTGTGGAATCAAATACAGGAAGAAGAAGATGGCTGATGACGAACAACACCAACACCAACAACAAAGACAACCCAGTTCAGAAACCAGGAGAGAGAAACAATCAAGCAGCAGAAGTGGTGATTATGATGAAAATCGAGTGAATGATCAGGTCTTGAAAAGGGGTTATAGTAATATGGGAAACAGGATATTTGCTCAACGATCATCTTTGTCGTCTTCTTCGTCTTCGTCTTCACAGTTGAAGAAACAGAGAAGTAGCAGTGAAGAGAGTAGTATCACCATCAATAGTAAGAGAAGTTTGGGGGAGGTGGAACAAGCTGCTGTATTGCTCATGTCTTTGTCTTGTGGTTCTTGTTTTGCTTAATTACACGATCAAAATGACTTAGTTATATAGGAATTATTACTATGTTTGTTGGTTGTTGGGTTTTGTTTGATGTGGGAGGGGATTTAGTGAAGAATGTTTAGGCAAAATGATAGTGACAAAAGGTGCTAATTATTTG

Coding sequence (CDS)

ATGAATGAGTTCAAGAAAATCTGTGCTGATTGCAAAACCACAAGAACTCCACTGTGGAGAAGTGGTCCTCATGGTCCTAGGTCACTCTGTAATGCTTGTGGAATCAAATACAGGAAGAAGAAGATGGCTGATGACGAACAACACCAACACCAACAACAAAGACAACCCAGTTCAGAAACCAGGAGAGAGAAACAATCAAGCAGCAGAAGTGGTGATTATGATGAAAATCGAGTGAATGATCAGGTCTTGAAAAGGGGTTATAGTAATATGGGAAACAGGATATTTGCTCAACGATCATCTTTGTCGTCTTCTTCGTCTTCGTCTTCACAGTTGAAGAAACAGAGAAGTAGCAGTGAAGAGAGTAGTATCACCATCAATAGTAAGAGAAGTTTGGGGGAGGTGGAACAAGCTGCTGTATTGCTCATGTCTTTGTCTTGTGGTTCTTGTTTTGCTTAA

Protein sequence

MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSETRREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo22927.1Spo22927.1mRNA


Homology
[Close]
BLAST of Spo22927.1 vs. NCBI nr
Match: gi|902188287|gb|KNA11097.1| (hypothetical protein SOVF_138220 [Spinacia oleracea])

HSP 1 Score: 282.7 bits (722), Expect = 3.700e-73
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET
Sbjct: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
           RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE
Sbjct: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
           SSITINSKRSLGEVEQAAVLLMSLSCGSCFA
Sbjct: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 151
[Close]
BLAST of Spo22927.1 vs. NCBI nr
Match: gi|731326696|ref|XP_010674149.1| (PREDICTED: GATA transcription factor 17 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-35
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNE KK C DCKTT+TPLWR+GPHGPRSLCNACGI+YRK+KM++D        +QPSSE 
Sbjct: 1   MNEVKKFCGDCKTTKTPLWRTGPHGPRSLCNACGIRYRKRKMSED--------KQPSSEI 60

Query: 61  RR-EKQSSSRSGDYD-ENRVNDQV-LKRGYSNM-GNRIFAQRSSL-SSSSSSSSQLKKQR 120
           RR EK  SSRS DY+ + ++N+ + ++  YS++  N +F QRS++ SSSSSSSSQ KKQR
Sbjct: 61  RRLEKTCSSRSYDYEYDYQMNEYIKMRYNYSDLSNNNMFVQRSTISSSSSSSSSQFKKQR 120

Query: 121 SSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
           SSSEES  + N  R LGEVEQAA+LLMSLSCGS FA
Sbjct: 121 SSSEESISSDN--RKLGEVEQAAILLMSLSCGSVFA 146
[Close]
BLAST of Spo22927.1 vs. NCBI nr
Match: gi|731415804|ref|XP_002278369.2| (PREDICTED: GATA transcription factor 16-like [Vitis vinifera])

HSP 1 Score: 101.3 bits (251), Expect = 1.500e-18
Identity = 67/151 (44.37%), Postives = 81/151 (53.64%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNE KK C DCKTT+TPLWR GP GP+SLCNACGI+YRK              R+ S   
Sbjct: 14  MNEIKKCCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRK--------------RRSSMVG 73

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
             +K+    SG +D +    + LK+    +GN +  QR          S +KKQR     
Sbjct: 74  VNKKKERMNSGSHDLS----ETLKQSLMALGNEVMMQRQR--------SSVKKQR----- 125

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
                   R LGE EQAAVLLM+LSCGS FA
Sbjct: 134 --------RKLGEEEQAAVLLMALSCGSVFA 125
[Close]
BLAST of Spo22927.1 vs. NCBI nr
Match: gi|590644487|ref|XP_007031095.1| (GATA transcription factor 15, putative [Theobroma cacao])

HSP 1 Score: 95.1 bits (235), Expect = 1.100e-16
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMA------DDEQHQHQQQRQPSS 64
           KK C DCKTT+TPLWR GP GP+SLCNACGI+YRKK+ A        E+ + + Q   SS
Sbjct: 23  KKFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRRAMLGLNKGPEKKKERSQSSHSS 82

Query: 65  ETRREKQSSS----RSGDYDE----NRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQ 124
            T     S+S      GD       N +++ V  R Y+ +G+ +F QRS  SSSS  S  
Sbjct: 83  STTTTTSSASVATTNVGDKKPSGQLNGLSESVKMRLYA-LGSEVFLQRS--SSSSLLSGV 142

Query: 125 LKKQRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCF 151
           +KKQR            +R LGE EQAA  LM+LSCGS F
Sbjct: 143 VKKQR---------CQRRRKLGEEEQAAFSLMALSCGSVF 170
[Close]
BLAST of Spo22927.1 vs. NCBI nr
Match: gi|703107941|ref|XP_010098872.1| (GATA transcription factor 16 [Morus notabilis])

HSP 1 Score: 92.4 bits (228), Expect = 7.100e-16
Identity = 65/164 (39.63%), Postives = 82/164 (50.00%), Query Frame = 1 

		  

Query: 2   NEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKK--------------KMADDEQ 61
           NE K+ C DC+TT+TPLWR GP GP+SLCNACGI+YRKK              ++  D  
Sbjct: 34  NENKRSCVDCRTTKTPLWRGGPAGPKSLCNACGIRYRKKMVSVMRMSTGSSSERIKRDRT 93

Query: 62  HQHQQQRQPSSETRREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSS 121
           H H      ++ T     S  +  D++E       LK    + G  + +Q+        S
Sbjct: 94  HTHSNTSNSTTLTNDTNTSVGKDKDFNE------TLKVKLDDFGKEVLSQK--------S 153

Query: 122 SSQLKKQRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
              +KKQR            KR L E EQAAVLLMSLSCGS FA
Sbjct: 154 RPVVKKQR---------CRRKRKLSEEEQAAVLLMSLSCGSVFA 174
[Close]
BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QV17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138220 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.600e-73
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET
Sbjct: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
           RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE
Sbjct: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
           SSITINSKRSLGEVEQAAVLLMSLSCGSCFA
Sbjct: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 151
[Close]
BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP51_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076560 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.600e-36
Identity = 99/156 (63.46%), Postives = 121/156 (77.56%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNE KK C DCKTT+TPLWR+GPHGPRSLCNACGI+YRK+KM++D        +QPSSE 
Sbjct: 1   MNEVKKFCGDCKTTKTPLWRTGPHGPRSLCNACGIRYRKRKMSED--------KQPSSEI 60

Query: 61  RR-EKQSSSRSGDYD-ENRVNDQV-LKRGYSNM-GNRIFAQRSSL-SSSSSSSSQLKKQR 120
           RR EK  SSRS DY+ + ++N+ + ++  YS++  N +F QRS++ SSSSSSSSQ KKQR
Sbjct: 61  RRLEKTCSSRSYDYEYDYQMNEYIKMRYNYSDLSNNNMFVQRSTISSSSSSSSSQFKKQR 120

Query: 121 SSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
           SSSEES  + N  R LGEVEQAA+LLMSLSCGS FA
Sbjct: 121 SSSEESISSDN--RKLGEVEQAAILLMSLSCGSVFA 146
[Close]
BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Match: A5BCR3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042395 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.100e-18
Identity = 67/151 (44.37%), Postives = 81/151 (53.64%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNE KK C DCKTT+TPLWR GP GP+SLCNACGI+YRK              R+ S   
Sbjct: 14  MNEIKKCCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRK--------------RRSSMVG 73

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
             +K+    SG +D +    + LK+    +GN +  QR          S +KKQR     
Sbjct: 74  VNKKKERMNSGSHDLS----ETLKQSLMALGNEVMMQRQR--------SSVKKQR----- 125

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
                   R LGE EQAAVLLM+LSCGS FA
Sbjct: 134 --------RKLGEEEQAAVLLMALSCGSVFA 125
[Close]
BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Match: F6I4R1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g01520 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.100e-18
Identity = 67/151 (44.37%), Postives = 81/151 (53.64%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           MNE KK C DCKTT+TPLWR GP GP+SLCNACGI+YRK              R+ S   
Sbjct: 13  MNEIKKCCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRK--------------RRSSMVG 72

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
             +K+    SG +D +    + LK+    +GN +  QR          S +KKQR     
Sbjct: 73  VNKKKERMNSGSHDLS----ETLKQSLMALGNEVMMQRQR--------SSVKKQR----- 124

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
                   R LGE EQAAVLLM+LSCGS FA
Sbjct: 133 --------RKLGEEEQAAVLLMALSCGSVFA 124
[Close]
BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Match: A0A061F4J3_THECC (GATA transcription factor 15, putative OS=Theobroma cacao GN=TCM_026732 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.600e-17
Identity = 73/160 (45.62%), Postives = 91/160 (56.88%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMA------DDEQHQHQQQRQPSS 64
           KK C DCKTT+TPLWR GP GP+SLCNACGI+YRKK+ A        E+ + + Q   SS
Sbjct: 23  KKFCTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRRAMLGLNKGPEKKKERSQSSHSS 82

Query: 65  ETRREKQSSS----RSGDYDE----NRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQ 124
            T     S+S      GD       N +++ V  R Y+ +G+ +F QRS  SSSS  S  
Sbjct: 83  STTTTTSSASVATTNVGDKKPSGQLNGLSESVKMRLYA-LGSEVFLQRS--SSSSLLSGV 142

Query: 125 LKKQRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCF 151
           +KKQR            +R LGE EQAA  LM+LSCGS F
Sbjct: 143 VKKQR---------CQRRRKLGEEEQAAFSLMALSCGSVF 170
[Close]
BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.000e-15
Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           +N+ KK CADC T++TPLWR GP GP+SLCNACGI+ RKK+    E            + 
Sbjct: 31  VNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTE------------DN 90

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
           ++ K+SSS  G    NR   + LK+   ++G R               S ++KQR     
Sbjct: 91  KKLKKSSSGGG----NRKFGESLKQSLMDLGIR-------------KRSTVEKQR----- 139

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
                   + LGE EQAAVLLM+LS GS +A
Sbjct: 151 --------QKLGEEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.400e-11
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSETRREK 64
           K+ C DC T RTPLWR GP GP+SLCNACGIK RKK+ A       ++++   S    + 
Sbjct: 41  KRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDL 100

Query: 65  QSSSRSG-DYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKK---------- 124
               R+   Y  N V+D     G  ++ +      +  SSSSSS+  + K          
Sbjct: 101 NLDHRNAKKYKINIVDD-----GKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPV 160

Query: 125 -QRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
            +RS+ E+  +     R LGE E+AAVLLM+LSC S +A
Sbjct: 161 MKRSAVEKKRLW----RKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Match: GAT22_ARATH (Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.800e-11
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 1 

		  

Query: 6   KICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMA 44
           +IC+DC TT+TPLWRSGP GP+SLCNACGI+ RK + A
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 236
[Close]
BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.000e-10
Identity = 23/39 (58.97%), Postives = 35/39 (89.74%), Query Frame = 1 

		  

Query: 6  KICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMAD 45
          + C++CKTT+TP+WR GP GP+SLCNACGI++RK++ ++
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSE 64
[Close]
BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Match: GAT15_ARATH (GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.400e-10
Identity = 49/144 (34.03%), Postives = 69/144 (47.92%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSETRREK 64
           KK CA C T++TPLWR GP GP+SLCNACGI+ RKK+                    ++K
Sbjct: 40  KKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSED----------KKK 99

Query: 65  QSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEESSIT 124
           +S +R+  + ++      LK+    +G  +  QRS+  +                     
Sbjct: 100 KSHNRNPKFGDS------LKQRLMELGREVMMQRSTAEN--------------------- 145

Query: 125 INSKRSLGEVEQAAVLLMSLSCGS 149
              +  LGE EQAAVLLM+LS  S
Sbjct: 160 -QRRNKLGEEEQAAVLLMALSYAS 145
[Close]
BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Match: AT5G49300.1 (GATA transcription factor 16)

HSP 1 Score: 82.0 bits (201), Expect = 3.400e-16
Identity = 60/151 (39.74%), Postives = 80/151 (52.98%), Query Frame = 1 

		  

Query: 1   MNEFKKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSET 60
           +N+ KK CADC T++TPLWR GP GP+SLCNACGI+ RKK+    E            + 
Sbjct: 31  VNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTE------------DN 90

Query: 61  RREKQSSSRSGDYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKKQRSSSEE 120
           ++ K+SSS  G    NR   + LK+   ++G R               S ++KQR     
Sbjct: 91  KKLKKSSSGGG----NRKFGESLKQSLMDLGIR-------------KRSTVEKQR----- 139

Query: 121 SSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
                   + LGE EQAAVLLM+LS GS +A
Sbjct: 151 --------QKLGEEEQAAVLLMALSYGSVYA 139
[Close]
BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein)

HSP 1 Score: 70.9 bits (172), Expect = 7.800e-13
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMA------DDEQHQHQQQRQPSS 64
           KK C DC T+RTPLWR GP GP+SLCNACGIK RKK+ A      DD + + +       
Sbjct: 36  KKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDIKIKSKSNNNLGL 95

Query: 65  ETRREKQSSSRSGDYDENRVNDQVLK--RGY-SNMGNRIFAQRSSLSSSSSSSSQLKK-- 124
           E+R  K       +    +    ++K  +G   N+ N+I     + SSS+++   +K+  
Sbjct: 96  ESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGNVKNKIKRDPENSSSSNNNKKNVKRVG 155

Query: 125 ------------QRSSSEESSITINSKRSLGEVEQAAVLLMSLSCG 148
                       +RS+ E+  +     R LGE E+AAVLLM+LSCG
Sbjct: 156 RFLDFGFKVPAMKRSAVEKKRLW----RKLGEEERAAVLLMALSCG 197
[Close]
BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Match: AT3G16870.1 (GATA transcription factor 17)

HSP 1 Score: 70.9 bits (172), Expect = 7.800e-13
Identity = 61/159 (38.36%), Postives = 84/159 (52.83%), Query Frame = 1 

		  

Query: 5   KKICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMADDEQHQHQQQRQPSSETRREK 64
           K+ C DC T RTPLWR GP GP+SLCNACGIK RKK+ A       ++++   S    + 
Sbjct: 41  KRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDL 100

Query: 65  QSSSRSG-DYDENRVNDQVLKRGYSNMGNRIFAQRSSLSSSSSSSSQLKK---------- 124
               R+   Y  N V+D     G  ++ +      +  SSSSSS+  + K          
Sbjct: 101 NLDHRNAKKYKINIVDD-----GKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPV 160

Query: 125 -QRSSSEESSITINSKRSLGEVEQAAVLLMSLSCGSCFA 152
            +RS+ E+  +     R LGE E+AAVLLM+LSC S +A
Sbjct: 161 MKRSAVEKKRLW----RKLGEEERAAVLLMALSCSSVYA 190
[Close]
BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Match: AT4G26150.1 (cytokinin-responsive gata factor 1)

HSP 1 Score: 70.5 bits (171), Expect = 1.000e-12
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 1 

		  

Query: 6   KICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMA 44
           +IC+DC TT+TPLWRSGP GP+SLCNACGI+ RK + A
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRA 236
[Close]
BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Match: AT5G26930.1 (GATA transcription factor 23)

HSP 1 Score: 67.0 bits (162), Expect = 1.100e-11
Identity = 23/39 (58.97%), Postives = 35/39 (89.74%), Query Frame = 1 

		  

Query: 6  KICADCKTTRTPLWRSGPHGPRSLCNACGIKYRKKKMAD 45
          + C++CKTT+TP+WR GP GP+SLCNACGI++RK++ ++
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSE 64
The following BLAST results are available for this feature:
BLAST of Spo22927.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902188287|gb|KNA11097.1|3.7e-73100.hypothetical protein SOVF_1382... [more]
gi|731326696|ref|XP_010674149.1|1.4e-3563.4PREDICTED: GATA transcription ... [more]
gi|731415804|ref|XP_002278369.2|1.5e-1844.3PREDICTED: GATA transcription ... [more]
gi|590644487|ref|XP_007031095.1|1.1e-1645.6GATA transcription factor 15, ... [more]
gi|703107941|ref|XP_010098872.1|7.1e-1639.6GATA transcription factor 16 [... [more]
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BLAST of Spo22927.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QV17_SPIOL2.6e-73100.Uncharacterized protein OS=Spi... [more]
A0A0J8CP51_BETVU9.6e-3663.4Uncharacterized protein OS=Bet... [more]
A5BCR3_VITVI1.1e-1844.3Putative uncharacterized prote... [more]
F6I4R1_VITVI1.1e-1844.3Putative uncharacterized prote... [more]
A0A061F4J3_THECC7.6e-1745.6GATA transcription factor 15, ... [more]
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BLAST of Spo22927.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GAT16_ARATH6.0e-1539.7GATA transcription factor 16 O... [more]
GAT17_ARATH1.4e-1138.3GATA transcription factor 17 O... [more]
GAT22_ARATH1.8e-1171.0Putative GATA transcription fa... [more]
GAT23_ARATH2.0e-1058.9GATA transcription factor 23 O... [more]
GAT15_ARATH3.4e-1034.0GATA transcription factor 15 O... [more]
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BLAST of Spo22927.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G49300.13.4e-1639.7GATA transcription factor 16[more]
AT4G16141.17.8e-1336.7GATA type zinc finger transcri... [more]
AT3G16870.17.8e-1338.3GATA transcription factor 17[more]
AT4G26150.11.0e-1271.0cytokinin-responsive gata fact... [more]
AT5G26930.11.1e-1158.9GATA transcription factor 23[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 8..41
score: 1.5
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 2..57
score: 1.6
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 8..33
scor
IPR000679Zinc finger, GATA-typePROFILEPS50114GATA_ZN_FINGER_2coord: 8..38
score: 12
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 6..42
score: 1.6
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 131..145
score: 9.1E-21coord: 1..41
score: 9.1
NoneNo IPR availablePANTHERPTHR10071:SF178SUBFAMILY NOT NAMEDcoord: 131..145
score: 9.1E-21coord: 1..41
score: 9.1
NoneNo IPR availableunknownSSF57716Glucocorticoid receptor-like (DNA-binding domain)coord: 4..48
score: 2.14

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006508 proteolysis
biological_process GO:0009658 chloroplast organization
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0008152 metabolic process
biological_process GO:0050896 response to stimulus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0080048 GDP-D-glucose phosphorylase activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005267 potassium channel activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0005515 protein binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008233 peptidase activity
RNA-Seq Expression