Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACACAATAAGAGGGGACGAGTCAGTGGTAATCCGAGGAAAACACCGGGACGAGGAAGGGAGAGTAGTGGTGGAGAAAGTAGAGGTGCACACCCACGACAAAGACACCCTGAAGCATCTCGAGAAGAAGCTCGTAGACACGGGACTCCACCGCCTTGAGCGTCACTCTGCTGATAACAGGGCATCGGTGAAGAAGCCACCTCCAAAGAAAGGACACGGGGGTAAGTATACATGGGAAGGGCCTGACCTTGAGGTTGAGAATGAGTTTGAAGCTGAACTTGTTCTCGACAAAGGGGATCCTAATTATGTTGATCAAGAAGAGGAGCTGGATCATGAGGTCAAAGAGAGGATCAAGGGTCAACTGGAAGTTCCTAAGCTGCCTCAGGCTAGAGAGTAG ATGAACACAATAAGAGGGGACGAGTCAGTGGTAATCCGAGGAAAACACCGGGACGAGGAAGGGAGAGTAGTGGTGGAGAAAGTAGAGGTGCACACCCACGACAAAGACACCCTGAAGCATCTCGAGAAGAAGCTCGTAGACACGGGACTCCACCGCCTTGAGCGTCACTCTGCTGATAACAGGGCATCGGTGAAGAAGCCACCTCCAAAGAAAGGACACGGGGGTAAGTATACATGGGAAGGGCCTGACCTTGAGGTTGAGAATGAGTTTGAAGCTGAACTTGTTCTCGACAAAGGGGATCCTAATTATGTTGATCAAGAAGAGGAGCTGGATCATGAGGTCAAAGAGAGGATCAAGGGTCAACTGGAAGTTCCTAAGCTGCCTCAGGCTAGAGAGTAG ATGAACACAATAAGAGGGGACGAGTCAGTGGTAATCCGAGGAAAACACCGGGACGAGGAAGGGAGAGTAGTGGTGGAGAAAGTAGAGGTGCACACCCACGACAAAGACACCCTGAAGCATCTCGAGAAGAAGCTCGTAGACACGGGACTCCACCGCCTTGAGCGTCACTCTGCTGATAACAGGGCATCGGTGAAGAAGCCACCTCCAAAGAAAGGACACGGGGGTAAGTATACATGGGAAGGGCCTGACCTTGAGGTTGAGAATGAGTTTGAAGCTGAACTTGTTCTCGACAAAGGGGATCCTAATTATGTTGATCAAGAAGAGGAGCTGGATCATGAGGTCAAAGAGAGGATCAAGGGTCAACTGGAAGTTCCTAAGCTGCCTCAGGCTAGAGAGTAG MNTIRGDESVVIRGKHRDEEGRVVVEKVEVHTHDKDTLKHLEKKLVDTGLHRLERHSADNRASVKKPPPKKGHGGKYTWEGPDLEVENEFEAELVLDKGDPNYVDQEEELDHEVKERIKGQLEVPKLPQARE Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo22945.1 vs. NCBI nr
Match: gi|902222380|gb|KNA19160.1| (hypothetical protein SOVF_064140 [Spinacia oleracea]) HSP 1 Score: 260.4 bits (664), Expect = 1.700e-66 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 1
BLAST of Spo22945.1 vs. NCBI nr
Match: gi|731345383|ref|XP_010683892.1| (PREDICTED: uncharacterized protein LOC104898501 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 173.7 bits (439), Expect = 2.100e-40 Identity = 87/129 (67.44%), Postives = 108/129 (83.72%), Query Frame = 1
BLAST of Spo22945.1 vs. NCBI nr
Match: gi|802562702|ref|XP_012066508.1| (PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]) HSP 1 Score: 128.3 bits (321), Expect = 1.000e-26 Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 1
BLAST of Spo22945.1 vs. NCBI nr
Match: gi|1000947750|ref|XP_015580496.1| (PREDICTED: uncharacterized protein LOC107262006 [Ricinus communis]) HSP 1 Score: 123.6 bits (309), Expect = 2.500e-25 Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = 1
BLAST of Spo22945.1 vs. NCBI nr
Match: gi|703160426|ref|XP_010112524.1| (hypothetical protein L484_012802 [Morus notabilis]) HSP 1 Score: 122.1 bits (305), Expect = 7.300e-25 Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = 1
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI60_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064140 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.200e-66 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 1
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g160420 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.500e-40 Identity = 87/129 (67.44%), Postives = 108/129 (83.72%), Query Frame = 1
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Match: A0A067L2Z2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 7.100e-27 Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 1
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Match: W9SB48_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012802 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.100e-25 Identity = 67/132 (50.76%), Postives = 86/132 (65.15%), Query Frame = 1
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Match: A0A0L9TF36_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan641s001300 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.400e-24 Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1
BLAST of Spo22945.1 vs. TAIR (Arabidopsis)
Match: AT3G10020.1 (unknown protein) HSP 1 Score: 100.9 bits (250), Expect = 6.200e-22 Identity = 55/132 (41.67%), Postives = 88/132 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo22945.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo22945.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo22945.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo22945.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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