Spo23186 (gene)

Overview
NameSpo23186
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionZinc finger family protein
LocationSpoScf_01942 : 57326 .. 58949 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCAAGCAGACCACAGAAGGCAGAAGGAAGCACAGCAGCAACACTATAAAACCTGCAAACAGCTCAGCAACCAACCACAACAGAAACAACTGACTGCAACAACAGAACAAAACAGCAGCAAACACTCATCCATGTGCATATTTGCACTGTCCAGTAATCAAACGTACTTGTAATCACATACTTAATTTTAATTAAAAACATCAATGTGCGTATTTGCACTGTCCAATAATCAAACTAGTTAAGAACATACCAAAATAAAAATAGGATCCTATATTATATATCCATACATCAAATTTTTGTCTTAACAAATCACACTAGAAATAAAAATAACTTATTTCGTTCCTTTAACATCAAAGAACTGTTGGTTCCTAAATCCCCGTGATTGAGATCGGAGCTTCATATCTTGATCTAATTGTTACCTTTGCCACCTGAATCATCATTAATCTACACATAAAAAAAATTATGTCATATTTGTGAAATGTAAAAAGCATTATAACACTATTTTGGAATAACCAAAAAATCACTATATAAGAAGTCATCTTATATAGTCTCACAGGTATATGTTCATTTCACTTCAGGTATGATCAACAAAATCAAGAAAATCACTATATGTATAATCTGTTCATTACATTTCAGGTATTACTCTCTCTAGTCTCTTTCCTTTTTTTTTATTTTTATTTTTTATGATTACGAGTTTTTCTTGATGTTTTGCGGTTGAATGCAATATTTTATGCACCAGATATAGTGTGTGCTGGGCAGGATGACCAAACATTGCCTTCAATCCCCATTACTCCTATTGAGGAAGAAGATCAACCAGATCCCTCGCCTGATTCTATTGCTTGTCCCAGTGCTACTACTAAGCCATACCCGTTGGTGGCCCAAGGTGGGACATTGGCTGCTGGAGTAGCAGGTTGTGGTCAAGCAGATGCATTAAAAGCTGCTCTTACTGCTGTGGCGAAGAGCAATGAGCAGATTGACCACAACCTGCTTGTAAAAATTCTAAGTAATCCGACAATTTTAGAACAGTTAGTTAGGCATCAAGGTCCTCAGAGTATCCCCAAGCCTTTATCTTCTGGAGCACCTGTGTACAGGATGCATACACCAGCTCCTCCTCCTCCTCAGTATAATAATATGGAAACAGGATCATCCTCATCCCCAATGATGATGTCAAATGGGTTAGTGTACCCGTATACTAATGGTACTGGACCTATGACCCATCAGCAATCAATCCCACCGCTCTCTATACAGTCTGGTTCTGGTTCTCAAATGAAGGACCTCAACTACTACAAGAACTTGATTCACCAACATGGAGGAGAAAGGCAAGGCGAGCCTCAACCTCAACCTCAAGCTCAACCTCCATTTTCAACCCATCCCATTCCCATCCATCATTCAGGAATAATAGATCAAGAAGTAGATAATTCAAAACCAAGGGATGCAAAACATAAGATTATGAAGCCTTGTATTTATTTCAATAGTTCAAAAGGTTGCAGACATGGTGCGAATTCTATTTATCAGCATGACATGTCGCTCCAGCAACGGGTTAGTAGCATCTCAGAAATGCAGAGTGCAAAGAGAATGAAGATGGATAGAGAGATTAGAGGACCACAGTCATACATTTAA

mRNA sequence

ATGCACCAAGCAGACCACAGAAGGCAGAAGGAAGCACAGCAGCAACACTATAAAACCTGCAAACAGCTCAGCAACCAACCACAACAGAAACAACTGACTGCAACAACAGAACAAAACAGCAGCAAACACTCATCCATGTGCATATTTGCACTGTCCAATATAGTGTGTGCTGGGCAGGATGACCAAACATTGCCTTCAATCCCCATTACTCCTATTGAGGAAGAAGATCAACCAGATCCCTCGCCTGATTCTATTGCTTGTCCCAGTGCTACTACTAAGCCATACCCGTTGGTGGCCCAAGGTGGGACATTGGCTGCTGGAGTAGCAGGTTGTGGTCAAGCAGATGCATTAAAAGCTGCTCTTACTGCTGTGGCGAAGAGCAATGAGCAGATTGACCACAACCTGCTTGTAAAAATTCTAAGTAATCCGACAATTTTAGAACAGTTAGTTAGGCATCAAGGTCCTCAGAGTATCCCCAAGCCTTTATCTTCTGGAGCACCTGTGTACAGGATGCATACACCAGCTCCTCCTCCTCCTCAGTATAATAATATGGAAACAGGATCATCCTCATCCCCAATGATGATGTCAAATGGGTTAGTGTACCCGTATACTAATGGTACTGGACCTATGACCCATCAGCAATCAATCCCACCGCTCTCTATACAGTCTGGTTCTGGTTCTCAAATGAAGGACCTCAACTACTACAAGAACTTGATTCACCAACATGGAGGAGAAAGGCAAGGCGAGCCTCAACCTCAACCTCAAGCTCAACCTCCATTTTCAACCCATCCCATTCCCATCCATCATTCAGGAATAATAGATCAAGAAGTAGATAATTCAAAACCAAGGGATGCAAAACATAAGATTATGAAGCCTTGTATTTATTTCAATAGTTCAAAAGGTTGCAGACATGGTGCGAATTCTATTTATCAGCATGACATGTCGCTCCAGCAACGGGTTAGTAGCATCTCAGAAATGCAGAGTGCAAAGAGAATGAAGATGGATAGAGAGATTAGAGGACCACAGTCATACATTTAA

Coding sequence (CDS)

ATGCACCAAGCAGACCACAGAAGGCAGAAGGAAGCACAGCAGCAACACTATAAAACCTGCAAACAGCTCAGCAACCAACCACAACAGAAACAACTGACTGCAACAACAGAACAAAACAGCAGCAAACACTCATCCATGTGCATATTTGCACTGTCCAATATAGTGTGTGCTGGGCAGGATGACCAAACATTGCCTTCAATCCCCATTACTCCTATTGAGGAAGAAGATCAACCAGATCCCTCGCCTGATTCTATTGCTTGTCCCAGTGCTACTACTAAGCCATACCCGTTGGTGGCCCAAGGTGGGACATTGGCTGCTGGAGTAGCAGGTTGTGGTCAAGCAGATGCATTAAAAGCTGCTCTTACTGCTGTGGCGAAGAGCAATGAGCAGATTGACCACAACCTGCTTGTAAAAATTCTAAGTAATCCGACAATTTTAGAACAGTTAGTTAGGCATCAAGGTCCTCAGAGTATCCCCAAGCCTTTATCTTCTGGAGCACCTGTGTACAGGATGCATACACCAGCTCCTCCTCCTCCTCAGTATAATAATATGGAAACAGGATCATCCTCATCCCCAATGATGATGTCAAATGGGTTAGTGTACCCGTATACTAATGGTACTGGACCTATGACCCATCAGCAATCAATCCCACCGCTCTCTATACAGTCTGGTTCTGGTTCTCAAATGAAGGACCTCAACTACTACAAGAACTTGATTCACCAACATGGAGGAGAAAGGCAAGGCGAGCCTCAACCTCAACCTCAAGCTCAACCTCCATTTTCAACCCATCCCATTCCCATCCATCATTCAGGAATAATAGATCAAGAAGTAGATAATTCAAAACCAAGGGATGCAAAACATAAGATTATGAAGCCTTGTATTTATTTCAATAGTTCAAAAGGTTGCAGACATGGTGCGAATTCTATTTATCAGCATGACATGTCGCTCCAGCAACGGGTTAGTAGCATCTCAGAAATGCAGAGTGCAAAGAGAATGAAGATGGATAGAGAGATTAGAGGACCACAGTCATACATTTAA

Protein sequence

MHQADHRRQKEAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAKSNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQSGSGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23186.1Spo23186.1mRNA


Homology
BLAST of Spo23186.1 vs. NCBI nr
Match: gi|902188875|gb|KNA11251.1| (hypothetical protein SOVF_136950 [Spinacia oleracea])

HSP 1 Score: 657.9 bits (1696), Expect = 9.700e-186
Identity = 332/339 (97.94%), Postives = 337/339 (99.41%), Query Frame = 1

		  

Query: 7   RRQKEAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS 66
           ++ +EAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS
Sbjct: 17  QKAEEAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS 76

Query: 67  IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK 126
           IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK
Sbjct: 77  IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK 136

Query: 127 SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET 186
           SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET
Sbjct: 137 SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET 196

Query: 187 GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQSGSGSQMKDLNYYKNLIHQHGGER 246
           GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLS+QSGSGSQMKDLNYYKNLIHQHGGER
Sbjct: 197 GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSVQSGSGSQMKDLNYYKNLIHQHGGER 256

Query: 247 QGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGA 306
           QGEPQPQPQ QPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHK+MKPCIYFNSSKGCRHGA
Sbjct: 257 QGEPQPQPQPQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHKMMKPCIYFNSSKGCRHGA 316

Query: 307 NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI 346
           NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI
Sbjct: 317 NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI 355

BLAST of Spo23186.1 vs. NCBI nr
Match: gi|902183084|gb|KNA10043.1| (hypothetical protein SOVF_147350 [Spinacia oleracea])

HSP 1 Score: 555.8 bits (1431), Expect = 5.200e-155
Identity = 284/300 (94.67%), Postives = 289/300 (96.33%), Query Frame = 1

		  

Query: 48  IFALSNIVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAG 107
           IF   +IVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIAC SATTK YPLVAQGGTLAAG
Sbjct: 140 IFYAPDIVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIACSSATTKSYPLVAQGGTLAAG 199

Query: 108 VAGCGQADALKAALTAVAKSNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP 167
           VA CGQADALKAALTAVAKSNEQIDH+LLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP
Sbjct: 200 VASCGQADALKAALTAVAKSNEQIDHDLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP 259

Query: 168 VYRMHTPAPPPP-QYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQS--G 227
           +YRM TPAPPPP QYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLS+QS  G
Sbjct: 260 MYRMDTPAPPPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSLQSGSG 319

Query: 228 SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD 287
           SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD
Sbjct: 320 SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD 379

Query: 288 AKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY 345
           AKHK+MKPCIYFNSSKGCRHGAN IYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY
Sbjct: 380 AKHKMMKPCIYFNSSKGCRHGANCIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY 439

BLAST of Spo23186.1 vs. NCBI nr
Match: gi|731362084|ref|XP_010692708.1| (PREDICTED: zinc finger CCCH domain-containing protein 6 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 341.7 bits (875), Expect = 1.500e-90
Identity = 207/343 (60.35%), Postives = 236/343 (68.80%), Query Frame = 1

		  

Query: 53  NIVCAGQDDQTLPSIPITPIEEED-QPDPSPDSIACPSATTKPYPLVAQG---------- 112
           ++ C  QDD+TLPS+PITPIEEED   DPSPD+ A  +A +    L++QG          
Sbjct: 139 DVECTIQDDKTLPSVPITPIEEEDLSGDPSPDNAASSAAISSN--LLSQGSYSSSQGFPA 198

Query: 113 ---------------GTLAAGVAGCGQADALKAALTAVAKSNEQIDHNLLVKILSNPTIL 172
                          G  AAGVA CGQ DALKAALTA AKSNEQIDH+LLVKILS+PTI+
Sbjct: 199 NSNSRTFGVSPNSSSGISAAGVASCGQEDALKAALTAAAKSNEQIDHDLLVKILSDPTII 258

Query: 173 EQLVRHQGPQ---------------SIPKPLSSGAPVYRMHTPAPPPPQYNNMETGSSSS 232
            QLVR QG                 +I +PLSSGAPVY+M    PPP QYNN ETGSSSS
Sbjct: 259 GQLVRQQGSSMSMGSQPVLPKPLEGNIARPLSSGAPVYKMD---PPPSQYNNAETGSSSS 318

Query: 233 PMMMSNGLVYPYTNGTGPM--THQQSIPPLS------IQSGSGSQMKDLNYYKNLIHQHG 292
            MM SNG +YPY NGTGPM  THQQS+  LS      + +   S +KDLNYYKNLI QHG
Sbjct: 319 GMM-SNGHLYPYLNGTGPMSMTHQQSVSLLSGVVPQVLSAQPPSHLKDLNYYKNLIQQHG 378

Query: 293 GERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEV-DNSKPRDAKHKIMKPCIYFNSSKGC 346
           GER  +      +Q PF THPI  HH G++DQ+V DNSKPRDAKHKIMKPC+YFN+SKGC
Sbjct: 379 GERHTD------SQHPFITHPI--HHGGVVDQDVVDNSKPRDAKHKIMKPCMYFNTSKGC 438

BLAST of Spo23186.1 vs. NCBI nr
Match: gi|225458045|ref|XP_002277913.1| (PREDICTED: zinc finger CCCH domain-containing protein 6 [Vitis vinifera])

HSP 1 Score: 181.0 bits (458), Expect = 3.500e-42
Identity = 140/320 (43.75%), Postives = 183/320 (57.19%), Query Frame = 1

		  

Query: 60  DDQTLPSIPITPIEEEDQP-DPSPDSIA----------------CPSATTKPYPLVAQ-- 119
           DDQ +  IPI P+E+E+   + S D++A                 PSA++   P +    
Sbjct: 148 DDQKILLIPIVPVEDEEAALEMSADTVAPINIPMSSQSLLLPPGIPSASSSNAPNIPNPP 207

Query: 120 -GGTLAAGVAGCGQAD---ALKAALTAVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQ 179
               +AAG+    + D   A  AA TAV +SNEQ   IDH+LL+KILSNP I+E++V  Q
Sbjct: 208 ANENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIKILSNPKIIERIVTDQ 267

Query: 180 -----GPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTG 239
                 PQ++P   +   P   +     PP   + +ET    S  + S G  Y  +NG G
Sbjct: 268 VVSSSNPQAVP---NQRLPPIALSD--QPPGHVSRVETNIPLSAAIPS-GPFYSQSNGPG 327

Query: 240 PMTHQQSIPPLSIQSGSGSQ------MKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFST 299
           P+   +  PP S+   S S        KD+NYYK+LI QHGGERQ EPQ Q Q+   F+ 
Sbjct: 328 PVPAPR--PPPSMVGPSSSSPPVRPVTKDINYYKSLIQQHGGERQ-EPQDQSQSHSQFAN 387

Query: 300 HPIPIHHSGIIDQE--VDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQQRV 341
              P HH   ++ E  V + KPRD+K KIMKPCIYF+SS+GCRHGAN  YQHD SLQQRV
Sbjct: 388 R--PNHHVLGMNPETVVTHPKPRDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRV 447

BLAST of Spo23186.1 vs. NCBI nr
Match: gi|1000986876|ref|XP_015576185.1| (PREDICTED: zinc finger CCCH domain-containing protein 6 [Ricinus communis])

HSP 1 Score: 181.0 bits (458), Expect = 3.500e-42
Identity = 139/321 (43.30%), Postives = 174/321 (54.21%), Query Frame = 1

		  

Query: 59  QDDQTLPSIPITPIEEEDQPDPSPD-------SIACPSATTKP-----YPLVAQGGTLAA 118
           Q D  +P IPITPIE+ED  D + D        ++  S    P      P ++       
Sbjct: 144 QGDHQVPQIPITPIEDEDATDATSDFRGPQIVPVSSQSHLLAPLPQRSIPSISNTRINEK 203

Query: 119 GVAGC----GQADALKAALT----AVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQGP 178
            VAG     G    + AA +    AV KSNEQ   IDH+LL+KIL+NP ++E+LV+  G 
Sbjct: 204 PVAGVLPVPGVEPDVVAAASAAFAAVNKSNEQGSLIDHDLLIKILNNPKLIEKLVQDYGA 263

Query: 179 ----QSIPKPLSSGAPVYRMHTPAPPPP---------QYNNMETGSSSSPMMMSNGLVYP 238
               Q++PKP  S  P+     P PPPP           N  E  ++SS    S+G  Y 
Sbjct: 264 ASNGQNVPKPAPSFVPL--SDPPPPPPPVSLSDPSYMHMNRTEMNTTSSFAATSSGPFYA 323

Query: 239 YTNGTGP--MTHQQSIPPLSIQSGSG-SQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPP 298
             NG GP  + + Q  PP    S  G  Q+KD+NYYKNLI QHGGERQ  P         
Sbjct: 324 QPNGAGPGYLPNAQVPPPAVPASSVGVPQVKDMNYYKNLIQQHGGERQEAP--------- 383

Query: 299 FSTHPIPIHHSGI--IDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQ 339
              H     +S +   +QE+ N K R+ K KIMKPCIYFNSS+GCRHGAN  YQHD S Q
Sbjct: 384 ---HQYGNRYSQLAGTNQELVNPKSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQ 443

BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXL0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_136950 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 6.800e-186
Identity = 332/339 (97.94%), Postives = 337/339 (99.41%), Query Frame = 1

		  

Query: 7   RRQKEAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS 66
           ++ +EAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS
Sbjct: 17  QKAEEAQQQHYKTCKQLSNQPQQKQLTATTEQNSSKHSSMCIFALSNIVCAGQDDQTLPS 76

Query: 67  IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK 126
           IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK
Sbjct: 77  IPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALKAALTAVAK 136

Query: 127 SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET 186
           SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET
Sbjct: 137 SNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMET 196

Query: 187 GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQSGSGSQMKDLNYYKNLIHQHGGER 246
           GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLS+QSGSGSQMKDLNYYKNLIHQHGGER
Sbjct: 197 GSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSVQSGSGSQMKDLNYYKNLIHQHGGER 256

Query: 247 QGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGA 306
           QGEPQPQPQ QPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHK+MKPCIYFNSSKGCRHGA
Sbjct: 257 QGEPQPQPQPQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKHKMMKPCIYFNSSKGCRHGA 316

Query: 307 NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI 346
           NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI
Sbjct: 317 NSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSYI 355

BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147350 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 3.600e-155
Identity = 284/300 (94.67%), Postives = 289/300 (96.33%), Query Frame = 1

		  

Query: 48  IFALSNIVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIACPSATTKPYPLVAQGGTLAAG 107
           IF   +IVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIAC SATTK YPLVAQGGTLAAG
Sbjct: 140 IFYAPDIVCAGQDDQTLPSIPITPIEEEDQPDPSPDSIACSSATTKSYPLVAQGGTLAAG 199

Query: 108 VAGCGQADALKAALTAVAKSNEQIDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP 167
           VA CGQADALKAALTAVAKSNEQIDH+LLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP
Sbjct: 200 VASCGQADALKAALTAVAKSNEQIDHDLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAP 259

Query: 168 VYRMHTPAPPPP-QYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQS--G 227
           +YRM TPAPPPP QYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLS+QS  G
Sbjct: 260 MYRMDTPAPPPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSLQSGSG 319

Query: 228 SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD 287
           SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD
Sbjct: 320 SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRD 379

Query: 288 AKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY 345
           AKHK+MKPCIYFNSSKGCRHGAN IYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY
Sbjct: 380 AKHKMMKPCIYFNSSKGCRHGANCIYQHDMSLQQRVSSISEMQSAKRMKMDREIRGPQSY 439

BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFA8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g022010 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.100e-90
Identity = 207/343 (60.35%), Postives = 236/343 (68.80%), Query Frame = 1

		  

Query: 53  NIVCAGQDDQTLPSIPITPIEEED-QPDPSPDSIACPSATTKPYPLVAQG---------- 112
           ++ C  QDD+TLPS+PITPIEEED   DPSPD+ A  +A +    L++QG          
Sbjct: 139 DVECTIQDDKTLPSVPITPIEEEDLSGDPSPDNAASSAAISSN--LLSQGSYSSSQGFPA 198

Query: 113 ---------------GTLAAGVAGCGQADALKAALTAVAKSNEQIDHNLLVKILSNPTIL 172
                          G  AAGVA CGQ DALKAALTA AKSNEQIDH+LLVKILS+PTI+
Sbjct: 199 NSNSRTFGVSPNSSSGISAAGVASCGQEDALKAALTAAAKSNEQIDHDLLVKILSDPTII 258

Query: 173 EQLVRHQGPQ---------------SIPKPLSSGAPVYRMHTPAPPPPQYNNMETGSSSS 232
            QLVR QG                 +I +PLSSGAPVY+M    PPP QYNN ETGSSSS
Sbjct: 259 GQLVRQQGSSMSMGSQPVLPKPLEGNIARPLSSGAPVYKMD---PPPSQYNNAETGSSSS 318

Query: 233 PMMMSNGLVYPYTNGTGPM--THQQSIPPLS------IQSGSGSQMKDLNYYKNLIHQHG 292
            MM SNG +YPY NGTGPM  THQQS+  LS      + +   S +KDLNYYKNLI QHG
Sbjct: 319 GMM-SNGHLYPYLNGTGPMSMTHQQSVSLLSGVVPQVLSAQPPSHLKDLNYYKNLIQQHG 378

Query: 293 GERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEV-DNSKPRDAKHKIMKPCIYFNSSKGC 346
           GER  +      +Q PF THPI  HH G++DQ+V DNSKPRDAKHKIMKPC+YFN+SKGC
Sbjct: 379 GERHTD------SQHPFITHPI--HHGGVVDQDVVDNSKPRDAKHKIMKPCMYFNTSKGC 438

BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Match: B9R861_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1596980 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.400e-42
Identity = 139/321 (43.30%), Postives = 174/321 (54.21%), Query Frame = 1

		  

Query: 59  QDDQTLPSIPITPIEEEDQPDPSPD-------SIACPSATTKP-----YPLVAQGGTLAA 118
           Q D  +P IPITPIE+ED  D + D        ++  S    P      P ++       
Sbjct: 153 QGDHQVPQIPITPIEDEDATDATSDFRGPQIVPVSSQSHLLAPLPQRSIPSISNTRINEK 212

Query: 119 GVAGC----GQADALKAALT----AVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQGP 178
            VAG     G    + AA +    AV KSNEQ   IDH+LL+KIL+NP ++E+LV+  G 
Sbjct: 213 PVAGVLPVPGVEPDVVAAASAAFAAVNKSNEQGSLIDHDLLIKILNNPKLIEKLVQDYGA 272

Query: 179 ----QSIPKPLSSGAPVYRMHTPAPPPP---------QYNNMETGSSSSPMMMSNGLVYP 238
               Q++PKP  S  P+     P PPPP           N  E  ++SS    S+G  Y 
Sbjct: 273 ASNGQNVPKPAPSFVPL--SDPPPPPPPVSLSDPSYMHMNRTEMNTTSSFAATSSGPFYA 332

Query: 239 YTNGTGP--MTHQQSIPPLSIQSGSG-SQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPP 298
             NG GP  + + Q  PP    S  G  Q+KD+NYYKNLI QHGGERQ  P         
Sbjct: 333 QPNGAGPGYLPNAQVPPPAVPASSVGVPQVKDMNYYKNLIQQHGGERQEAP--------- 392

Query: 299 FSTHPIPIHHSGI--IDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQ 339
              H     +S +   +QE+ N K R+ K KIMKPCIYFNSS+GCRHGAN  YQHD S Q
Sbjct: 393 ---HQYGNRYSQLAGTNQELVNPKSRELKPKIMKPCIYFNSSRGCRHGANCAYQHDPSFQ 452

BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Match: F6H069_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13880 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.400e-42
Identity = 140/320 (43.75%), Postives = 183/320 (57.19%), Query Frame = 1

		  

Query: 60  DDQTLPSIPITPIEEEDQP-DPSPDSIA----------------CPSATTKPYPLVAQ-- 119
           DDQ +  IPI P+E+E+   + S D++A                 PSA++   P +    
Sbjct: 148 DDQKILLIPIVPVEDEEAALEMSADTVAPINIPMSSQSLLLPPGIPSASSSNAPNIPNPP 207

Query: 120 -GGTLAAGVAGCGQAD---ALKAALTAVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQ 179
               +AAG+    + D   A  AA TAV +SNEQ   IDH+LL+KILSNP I+E++V  Q
Sbjct: 208 ANENVAAGMVPGVEPDVVAAASAAFTAVMRSNEQGNLIDHDLLIKILSNPKIIERIVTDQ 267

Query: 180 -----GPQSIPKPLSSGAPVYRMHTPAPPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTG 239
                 PQ++P   +   P   +     PP   + +ET    S  + S G  Y  +NG G
Sbjct: 268 VVSSSNPQAVP---NQRLPPIALSD--QPPGHVSRVETNIPLSAAIPS-GPFYSQSNGPG 327

Query: 240 PMTHQQSIPPLSIQSGSGSQ------MKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFST 299
           P+   +  PP S+   S S        KD+NYYK+LI QHGGERQ EPQ Q Q+   F+ 
Sbjct: 328 PVPAPR--PPPSMVGPSSSSPPVRPVTKDINYYKSLIQQHGGERQ-EPQDQSQSHSQFAN 387

Query: 300 HPIPIHHSGIIDQE--VDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMSLQQRV 341
              P HH   ++ E  V + KPRD+K KIMKPCIYF+SS+GCRHGAN  YQHD SLQQRV
Sbjct: 388 R--PNHHVLGMNPETVVTHPKPRDSKPKIMKPCIYFHSSRGCRHGANCSYQHDASLQQRV 447

BLAST of Spo23186.1 vs. ExPASy Swiss-Prot
Match: C3H6_ARATH (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana GN=At1g19860 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.400e-27
Identity = 103/296 (34.80%), Postives = 152/296 (51.35%), Query Frame = 1

		  

Query: 60  DDQTLPSIPITPIEEED-QPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALK 119
           DDQ    IPI P+E++D   D + D            P +    T  +     G    + 
Sbjct: 139 DDQQTIVIPILPVEDDDIAMDSASDFPTQSGVDVGTEPSITDENTSTSSTLPAGPD--IM 198

Query: 120 AALTAVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPA 179
           AAL+A++ S EQ   ID +LL+KILSNP ++E LV ++G  S     S+ + +Y   T  
Sbjct: 199 AALSAISNSKEQGSMIDQDLLIKILSNPKLVENLVANRG--SAGSVSSNTSSLYSSST-- 258

Query: 180 PPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSI-------QSGSGS- 239
                  +   G  ++  + SNG  Y       P+TH   IPP++        Q   G+ 
Sbjct: 259 -------HEANGVVTTAPISSNGQFY----AQPPITH---IPPMAYTPHAPQDQPNYGAP 318

Query: 240 QMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKH 299
             +D +YYKNLI QHGG+RQ  P P       ++  P    +  +++   +N +PRD+K 
Sbjct: 319 PARDASYYKNLIQQHGGDRQETP-PVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKP 378

Query: 300 KIMKPCIYFNSSKGCRHGANSIYQHD------MSLQQRVSSISEMQSAKRMKMDRE 338
           KIMK C+YFNS++GCRHGAN +YQHD       +L     + S+MQ+AKRM+ DR+
Sbjct: 379 KIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMRFDRD 413

BLAST of Spo23186.1 vs. ExPASy Swiss-Prot
Match: C3H30_ORYSJ (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica GN=Os04g0663200 PE=2 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 1.500e-16
Identity = 106/337 (31.45%), Postives = 149/337 (44.21%), Query Frame = 1

		  

Query: 57  AGQDDQTLPSIPITPIEEEDQPD---------PSPDSIACPSATTKPYPLVAQ-----GG 116
           A  DD     +P+ P+E++D  D         PS  +I   S T    P+ A+     GG
Sbjct: 142 AHYDDSKTLLVPLIPLEDDDASDQLEGPTLDLPSHYNITGVSNT----PVSAEQQPPCGG 201

Query: 117 TLAAGVAGCGQADALKAALTAVAK---SNEQ----------IDHNLLVKILSNPTILEQL 176
            +++G     QA A+ A +TA+ +   SN+           ID  LL KILS+P+ L++L
Sbjct: 202 AISSGFTIEPQA-AVSATVTAIMQTIQSNQNGSMADQNGSTIDQELLFKILSDPSQLQRL 261

Query: 177 VRHQGPQ---------------SIPKP---LSSGAPV-------YRMHTPAPPPPQYNNM 236
           ++  GP                SIP P    SS AP        + M+   PPPP   N 
Sbjct: 262 MKECGPVRHEQSASSSVVAPLVSIPPPQITASSPAPFSDHVGTFHGMNPTLPPPPPMMNR 321

Query: 237 ETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSIQSGSGSQMKDLNYYKNLIHQHGG 296
              +  S  M       P  N    +    S P ++  S  G   + + YYK LIHQHGG
Sbjct: 322 PPSTIPSVAMNHPPSSSPAMNFGSALP--SSSPSVNFGSVPG---RGVGYYKTLIHQHGG 381

Query: 297 ERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSK-PRDAKHKIMKPCIYFNSSKGCR 341
           ER  +P  Q   Q      P P  + GI       +   RD K + MKPC YFNS KGCR
Sbjct: 382 ERLEQPFEQHGMQFGMYRQPGPPQNGGIDAMNGAAAMVSRDGKVRPMKPCAYFNSPKGCR 441

BLAST of Spo23186.1 vs. ExPASy Swiss-Prot
Match: C3H68_ARATH (Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana GN=At5g66270 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.100e-6
Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 1

		  

Query: 161 PLSSGAPVYRMHTPAPPPPQYNNMETGSSSSPMMMSNGLVYPYTN---GTGPMTHQQSIP 220
           PLSSG  V   +T AP  P      TG           L++P ++      P + +    
Sbjct: 288 PLSSGIKVEDSYTAAPLKPS-----TGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETD 347

Query: 221 PLSIQSG--------SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHH 280
           P  I++G        S   +KDL+Y+KNLI +HG  +    +                ++
Sbjct: 348 P-QIRNGNTNRDDQVSAKPVKDLDYFKNLIREHGAVKPATTETN--------------NY 407

Query: 281 SGIIDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMS 316
            G +D +      +  K +I KPC+YFN  KGCR G + +Y HD S
Sbjct: 408 KGRVDHK------KIVKVRIQKPCMYFNRPKGCRMGESCLYLHDSS 427

BLAST of Spo23186.1 vs. TAIR (Arabidopsis)
Match: AT1G19860.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 125.2 bits (313), Expect = 8.000e-29
Identity = 103/296 (34.80%), Postives = 152/296 (51.35%), Query Frame = 1

		  

Query: 60  DDQTLPSIPITPIEEED-QPDPSPDSIACPSATTKPYPLVAQGGTLAAGVAGCGQADALK 119
           DDQ    IPI P+E++D   D + D            P +    T  +     G    + 
Sbjct: 139 DDQQTIVIPILPVEDDDIAMDSASDFPTQSGVDVGTEPSITDENTSTSSTLPAGPD--IM 198

Query: 120 AALTAVAKSNEQ---IDHNLLVKILSNPTILEQLVRHQGPQSIPKPLSSGAPVYRMHTPA 179
           AAL+A++ S EQ   ID +LL+KILSNP ++E LV ++G  S     S+ + +Y   T  
Sbjct: 199 AALSAISNSKEQGSMIDQDLLIKILSNPKLVENLVANRG--SAGSVSSNTSSLYSSST-- 258

Query: 180 PPPPQYNNMETGSSSSPMMMSNGLVYPYTNGTGPMTHQQSIPPLSI-------QSGSGS- 239
                  +   G  ++  + SNG  Y       P+TH   IPP++        Q   G+ 
Sbjct: 259 -------HEANGVVTTAPISSNGQFY----AQPPITH---IPPMAYTPHAPQDQPNYGAP 318

Query: 240 QMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHHSGIIDQEVDNSKPRDAKH 299
             +D +YYKNLI QHGG+RQ  P P       ++  P    +  +++   +N +PRD+K 
Sbjct: 319 PARDASYYKNLIQQHGGDRQETP-PVQHLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKP 378

Query: 300 KIMKPCIYFNSSKGCRHGANSIYQHD------MSLQQRVSSISEMQSAKRMKMDRE 338
           KIMK C+YFNS++GCRHGAN +YQHD       +L     + S+MQ+AKRM+ DR+
Sbjct: 379 KIMKACMYFNSARGCRHGANCMYQHDATPYQPRNLNNGNINTSDMQNAKRMRFDRD 413

BLAST of Spo23186.1 vs. TAIR (Arabidopsis)
Match: AT5G66270.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.700e-7
Identity = 48/166 (28.92%), Postives = 72/166 (43.37%), Query Frame = 1

		  

Query: 161 PLSSGAPVYRMHTPAPPPPQYNNMETGSSSSPMMMSNGLVYPYTN---GTGPMTHQQSIP 220
           PLSSG  V   +T AP  P      TG           L++P ++      P + +    
Sbjct: 288 PLSSGIKVEDSYTAAPLKPS-----TGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETD 347

Query: 221 PLSIQSG--------SGSQMKDLNYYKNLIHQHGGERQGEPQPQPQAQPPFSTHPIPIHH 280
           P  I++G        S   +KDL+Y+KNLI +HG  +    +                ++
Sbjct: 348 P-QIRNGNTNRDDQVSAKPVKDLDYFKNLIREHGAVKPATTETN--------------NY 407

Query: 281 SGIIDQEVDNSKPRDAKHKIMKPCIYFNSSKGCRHGANSIYQHDMS 316
            G +D +      +  K +I KPC+YFN  KGCR G + +Y HD S
Sbjct: 408 KGRVDHK------KIVKVRIQKPCMYFNRPKGCRMGESCLYLHDSS 427

The following BLAST results are available for this feature:
BLAST of Spo23186.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902188875|gb|KNA11251.1|9.7e-18697.9hypothetical protein SOVF_1369... [more]
gi|902183084|gb|KNA10043.1|5.2e-15594.6hypothetical protein SOVF_1473... [more]
gi|731362084|ref|XP_010692708.1|1.5e-9060.3PREDICTED: zinc finger CCCH do... [more]
gi|225458045|ref|XP_002277913.1|3.5e-4243.7PREDICTED: zinc finger CCCH do... [more]
gi|1000986876|ref|XP_015576185.1|3.5e-4243.3PREDICTED: zinc finger CCCH do... [more]
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BLAST of Spo23186.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QXL0_SPIOL6.8e-18697.9Uncharacterized protein OS=Spi... [more]
A0A0K9QTL1_SPIOL3.6e-15594.6Uncharacterized protein OS=Spi... [more]
A0A0J8BFA8_BETVU1.1e-9060.3Uncharacterized protein OS=Bet... [more]
B9R861_RICCO2.4e-4243.3Nucleic acid binding protein, ... [more]
F6H069_VITVI2.4e-4243.7Putative uncharacterized prote... [more]
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BLAST of Spo23186.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C3H6_ARATH1.4e-2734.8Zinc finger CCCH domain-contai... [more]
C3H30_ORYSJ1.5e-1631.4Zinc finger CCCH domain-contai... [more]
C3H68_ARATH3.1e-628.9Zinc finger CCCH domain-contai... [more]
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BLAST of Spo23186.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G19860.18.0e-2934.8Zinc finger C-x8-C-x5-C-x3-H t... [more]
AT5G66270.11.7e-728.9Zinc finger C-x8-C-x5-C-x3-H t... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33400FAMILY NOT NAMEDcoord: 59..340
score: 6.9
NoneNo IPR availablePANTHERPTHR33400:SF2ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATEDcoord: 59..340
score: 6.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0007034 vacuolar transport
cellular_component GO:0030904 retromer complex
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo094690.72Barchart | Table
Spo272360.69Barchart | Table