Spo23278 (gene) | SpinachBase

Overview


Name	Spo23278
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SNARE associated Golgi protein family
Location	chr6 : 44111186 .. 44116390 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAGACAAGAAAACAAACAAAAAAACCAAAGTTGGACCATAACTTTTGGTTCTACTTCTCTCCCATTTCTACCCTTTTTTGATTTTTAAATCCCACCAAATATAAACAAATCTTGGCAATAATTATATAATCAATAATAATGAATTAGGATAATTTCTCTATTCTTTTTTCCAACGAATATTCTCCAAATTAATTTATTTCCCACAAAATTAGAAGCTCAAACGTAAAACACACAAATACTCCGTAGTAGAGAAGTGTGAAGAAAGTAAACAAAAAGGAAGAAAGAATATCTCTCAAAAATTCTCCAATTTTTCTTCCGTTTATCTTCCTCATCTTCTCCTTAAATCTGGGTCTGAAATTTCATCTGGGGCATTATATAATTCAATCCCAGATAAACCCAAAACTTCAAATTTGTTAACTTTTTGGGTTTAAATTTTGTGGGGTTAAGAGAAAATTAAGAAATAAAAATGGAGAAATCAGAGGAAAGATTGGTGTGTGAAGAAAAAACAAGTTCGAAGTATCCATTAACAATGTGGGAAGTATCAGCAGCTTTAATGGTTGTATTAGCATATGGATTAGGGCTTTTGGGTGTTTATCTAACCATGCCTGCTTCTGATTATAGCTTCCTCAAGTTGCCTCGCACCCTTGAAGATTTACAAATTCTTAGGTATCCACAAAATACTTCCTATATTTTATTTTATTTTATTTATTTATTTATTTCAGCAATTATAGTTTCGCATTATGATTGTTTTGGTTAAATTTGACTTTTTTTAGTGGTTTATTTCTATATGAATGGTGTTATTAGATCTGAAACATTGGGATTTTTGTTTTGTTTTATTGTTCAAAAAGGGGGGAAAGATTGAATCTTTACAGTTGTGCATTAATGGGGGGTTATCAGCTGTTTGTTTGATTGTACCATGTTTGATTGTGCATTAATGTTGCTGTGTTGTTCGTCTTTTATGATACGCAAATTCTTGTATAATTCAATGTGATAACTGAAAGTAGAACTTAGTGTTGGAAATTTCTTAAACTATTGAAGTTTTTTCAGCTGTTTGCATAGCTTTTTCTCTGTAGATTAAGGAGCTTATTGATCACTATTCCACCTTCATTGTCAGACAATCTAGCTTGTAGCTTCTGGGATTTAGTTAAGTATTTTCACCAGATGATCAAAGTAACTAGTAAGCCTTATTCGCCAGTTCGGATTTCTTTCCAATTTGGGAATTTAGTTTGAACTTGATGTAGCTGGTATAGTATTATGTTTATGAAAGTGTGATCAGTTGACATTTTCATCAGTTATTTTGTTGAACTTTGCCTTTGTTCTTATTTGGTATTTCATTGGAAGCTGTTCTTCGGATGCTATTCTTTTTGACAAAGAACCTTTAGTTTTAAGGACATGTTTTCCATTCCTTTGGGCACATATAGATTGAGTTTTGAGAAGTGGAAAAAAGCTATGACTAAATTAGTTTTCTGTTGAACTGAGTGCTTGGGATCTAATTCCATGTGTTCTTAAAACTTCATGTCTTGTGTAGGCTGACATATGTCTTTTACATTCATCTGGTTGTAAACTTGATGTCTTAAAATTTCATTAGCTGTAATCTGCTACCTTCATGGAATTTGGCTGGAAATGGTGTACATTGCAGTTTACAGCGACTGGATCATACAATAAATAATGGCCTCTTAAAAGCTTTGCACATGCGCATCATTGTCCTTTGCTCTCTTGATTTAGCCCAAATATCATAAAAAGCATTCTGATGCTCACCCAACTTCTATTGCTTTACCCATCCCAACTTTGAGACGTGTCATTGAACAAGCTGAGGTTTGGGGCAGAAAGAGAGGTTTGAGGCAAAAAAGAGGTTGGACTGATTCAAAGCTCTAATGAGACTGTGAGAACGTTTGGTTTAGAGAGGAATGGAAGACAGGTTTGAGTCTTATAGGCTAATTTTGAAGGAAAAAAACGGGTTTAAGGAGATTTTTGGAAAAGAGGTTTGTAATATACTAGTGAAATGACTATTCTATAGTAAAGTTAATCAAATTTACTATTGTACTCTTTAGCAAGGGTTCTCAAAAATTCCCCTGTAAATAAAACATCGCAATATCCTTATTAGTCATTTTACTCAAGAAGTAGCTATTAGCTAACCGCTATTTACAAAACACCTTTACACAAATTGCTAATACAATCCGCTAGTCAAACCAACTAACAACTAGCCAGCTAACAACTCATGTTAATTGCTATACTGGGCTTCAGTGACGGTGCACTGTTACTTGGGCTGAGTGATTCGGTTGATTTAACTTCTGTCGTAAATGCTTGTCTTTCTTCTTGATATAGTTGCCTCGTCCTGCCTTAGTTTGCTGGTGCCTTAGTTAGAGTTTTAATGTGGGAGCATCTGAATACTGAACCTTGTAGTGTGCCTGTAGAATAGACTGAGGGGTCTAATAGTCTAAGGCTGCGTTCTATTCACCTGATTTTCACTTATTTTTCCTGAACTTATCTTATCTAAACTTATTCGAACTTATCAAAACTTATTTTAGTTATAAATTGTACTTGGTCAACCCTTATTTTTCCTGAACTTATCTTATCTGAACTTAACTGAACTTATCTGAACTTATTTTTCCTGAAATAAAAGTGGAAGTAAGGTGAACAGAACAGGGCCTAACTGTCTAAAGCAATTGGATGTCATAGAAAGTTTAGGTACTGGTTGTGAGTTTTGTCTTTAACAAACCTTATACATTGTTTGCATTTCATTGGTTCACTTCATATGTTTGAAATGATCTAGATGTAATCCTCTAATTGGAAATATTATGCTAATTCCTCCTTTCACTAGTCATTCTTCTGAATCCATCAAACAGCTTCTAAAAAATGCACCCCCTAATCTTCCAGAATCCCAACTACTAATATTCTGATTAATTACTGATAATGTTCCCTTGACATGCTACAATATTCAAAAAATAAAAATAAAAATGGAAGTGAAGTTTTGTTGTTATCTTAATGTTGATCCTTTGTTTTCTAGAGACCATCTCGAGACGTACACAAGTGACTATACGGTGCAAGTATTGGTTGGATACTCTGTGGTCTACATTTTCATGCAGACTTTCATGATTCCAGGAACTGTGTTTATGTCTTTGTTAGCTGGAGCCCTTTTTGGTGTATTTAGAGGTTTGGCATTGGTCCTTTTCACTGCTACAGCTGGTGCTTCGTCTTGCTTTTTCTTGTCAAAACTTATTGGCCGACCTCTTGTTTTTTCAATGTGGCCGGACAAACTGACTTTCTTCCAAGCACAGGTAACAATAATCTCTGCTTGGTCCTTAAAAAATACTTGCTCCATTCTTATTTACATGACAGAATTGAGTTTTGGACACTATTCACACATGCTCCTTTGACTTCCTTTTGTGATATTAATGTTTGAAATCGTGGGGTGGCAAACGTGCCTAAATAATTGTGTCATCTAAAAAATAACGGAGTAAGTGTTTTCTTTTTGAACAACGCCACCAATTTCTGAGGCTGATCTTGGTTTTATTTCTTCCCTTACCTTCATTCAGGTGGCGAAAAGACGTCAGAACTTGTTGAATTACATGCTTTTCCTAAGAGTAACACCCACACTACCAAATACATTTATCAATGTGGCTTCACCAATTGTGGATATACCTTACCACACCTTCTTCTTGGCGACATTCATTGGACTGATCCCTGCTGCTTTTGTCACTGTCAGAGTATGTGTTTTTACTATGATATAGGCAAACTATTTTTTATTGTTTTCTTTGATGAAGTAAAATTTTCAAGATATATTTGCCTGAAACCATCCTCGGTTATGTCAATCTGCACAGAACTCTTCATTCGTTTGACCATCCATGTGTTATATTCCCTTATTGATGTGTCATGCACCACTCTTCAAGTACTACTATCCATCTACCAGGGCACGGGCATACATGTCCTAACAAACAACTAAGGTTTATTTAGGCTCCGTTTGGTTTGGCGTATACTTTTTTCAGTGAAAAATGATTTTTCAAGGGAAACACAATTCCAAACTAGTTTTCCTTTGTTTGGTTCCTTACAAGAAAAGTAATATGAAAAAGGGAAATGGAAGAAGATGGGTGAAGACTGAAGAGTGATGGAAAGAAGGAAGGGGGAGGTAAGGAGGAAAGATAGAAAAGTGGTTTCCCTTCCTTTCAAATTGAAATTTGTTTTCCATTCCTTGCCAAATCAAACAACGTAAAATGATTGAAAAGGGGAAAATCATTTTCCATGAAAACGTTTTACACCCTACCAAACAGAGCATTAGTCGAAAAAAATGTTTGGACCGGTATCAGATTCTATGGGGGAAAAGAATGAGTTGGTGAATATCGTTGAAAGTTAGAGGTGGTTTCAAGCAAATTGGTGTTTTATTTTGATCAAGTTTCTCCTAAATTAAGATGTACTCCGTACTTTTTATCTTTTCTTTCATAACCCCATCTTTCAAAGCATGAATATGAGGCATGAACATCGATGATATTGCCTGACACGGTCTCTTTTCCTCTGTAATGGCAGGCTGGAATAGCTCTTGGAGAATTGCGATCAATAGGCGATTTGTATGACTTTCAGTCAATTGCCACACTTTTCCTAATTGGGATCGTTTCAATCACCCCTACCTTGATGAACAAGAACAAAACATAATTGACAAAACCTTGTTGCTTTTCTCAGTTAATGCTAAACCTCCTATTCGTGGTCGCTTATCTCTGTACAGATCCTACGGCCCATAAAACTGCTTGTTGCATCTCGTACCACCACAGAGAATGAACTCGAGGGGTATAAAACTTGTCGACTCTGTATACTCTGAAATGGCATTCTGAAAGGGCATATGCTCATATGCTAATGCTATGCTGAAGGCGAAAATTCTGTGTAGTTTGTGGATAGTAGTAGTAGTCGATTTGTTTGTTGGTTGGTTGGTTTCACTTTGGAATGTAAAATAAATGATGTGACAATAATTTTCTAGATTTTATGAAATGTCTGTTTTCATATTCAATCTTCATCTTGGTCCTTCACAAAAGCATTTGTTGTCTTACTGAATGATGGCTGAAATCTGGAAATGTGATTTGACATTCAGCAGAAAATTTGATTTGTGAATGTTGTCAATGAAGTTTTGATGATATATTGTCTACAGAGTACAATTATGACAAGAAAGGTTGTACATTTTCAGTTCTTAAATAATAGACTACATTTTATTAAAGA

mRNA sequence

TAAAAGACAAGAAAACAAACAAAAAAACCAAAGTTGGACCATAACTTTTGGTTCTACTTCTCTCCCATTTCTACCCTTTTTTGATTTTTAAATCCCACCAAATATAAACAAATCTTGGCAATAATTATATAATCAATAATAATGAATTAGGATAATTTCTCTATTCTTTTTTCCAACGAATATTCTCCAAATTAATTTATTTCCCACAAAATTAGAAGCTCAAACGTAAAACACACAAATACTCCGTAGTAGAGAAGTGTGAAGAAAGTAAACAAAAAGGAAGAAAGAATATCTCTCAAAAATTCTCCAATTTTTCTTCCGTTTATCTTCCTCATCTTCTCCTTAAATCTGGGTCTGAAATTTCATCTGGGGCATTATATAATTCAATCCCAGATAAACCCAAAACTTCAAATTTGTTAACTTTTTGGGTTTAAATTTTGTGGGGTTAAGAGAAAATTAAGAAATAAAAATGGAGAAATCAGAGGAAAGATTGGTGTGTGAAGAAAAAACAAGTTCGAAGTATCCATTAACAATGTGGGAAGTATCAGCAGCTTTAATGGTTGTATTAGCATATGGATTAGGGCTTTTGGGTGTTTATCTAACCATGCCTGCTTCTGATTATAGCTTCCTCAAGTTGCCTCGCACCCTTGAAGATTTACAAATTCTTAGAGACCATCTCGAGACGTACACAAGTGACTATACGGTGCAAGTATTGGTTGGATACTCTGTGGTCTACATTTTCATGCAGACTTTCATGATTCCAGGAACTGTGTTTATGTCTTTGTTAGCTGGAGCCCTTTTTGGTGTATTTAGAGGTTTGGCATTGGTCCTTTTCACTGCTACAGCTGGTGCTTCGTCTTGCTTTTTCTTGTCAAAACTTATTGGCCGACCTCTTGTTTTTTCAATGTGGCCGGACAAACTGACTTTCTTCCAAGCACAGGTGGCGAAAAGACGTCAGAACTTGTTGAATTACATGCTTTTCCTAAGAGTAACACCCACACTACCAAATACATTTATCAATGTGGCTTCACCAATTGTGGATATACCTTACCACACCTTCTTCTTGGCGACATTCATTGGACTGATCCCTGCTGCTTTTGTCACTGTCAGAGCTGGAATAGCTCTTGGAGAATTGCGATCAATAGGCGATTTGTATGACTTTCAGTCAATTGCCACACTTTTCCTAATTGGGATCGTTTCAATCACCCCTACCTTGATGAACAAGAACAAAACATAATTGACAAAACCTTGTTGCTTTTCTCAGTTAATGCTAAACCTCCTATTCGTGGTCGCTTATCTCTGTACAGATCCTACGGCCCATAAAACTGCTTGTTGCATCTCGTACCACCACAGAGAATGAACTCGAGGGGTATAAAACTTGTCGACTCTGTATACTCTGAAATGGCATTCTGAAAGGGCATATGCTCATATGCTAATGCTATGCTGAAGGCGAAAATTCTGTGTAGTTTGTGGATAGTAGTAGTAGTCGATTTGTTTGTTGGTTGGTTGGTTTCACTTTGGAATGTAAAATAAATGATGTGACAATAATTTTCTAGATTTTATGAAATGTCTGTTTTCATATTCAATCTTCATCTTGGTCCTTCACAAAAGCATTTGTTGTCTTACTGAATGATGGCTGAAATCTGGAAATGTGATTTGACATTCAGCAGAAAATTTGATTTGTGAATGTTGTCAATGAAGTTTTGATGATATATTGTCTACAGAGTACAATTATGACAAGAAAGGTTGTACATTTTCAGTTCTTAAATAATAGACTACATTTTATTAAAGA

Coding sequence (CDS)

ATGGAGAAATCAGAGGAAAGATTGGTGTGTGAAGAAAAAACAAGTTCGAAGTATCCATTAACAATGTGGGAAGTATCAGCAGCTTTAATGGTTGTATTAGCATATGGATTAGGGCTTTTGGGTGTTTATCTAACCATGCCTGCTTCTGATTATAGCTTCCTCAAGTTGCCTCGCACCCTTGAAGATTTACAAATTCTTAGAGACCATCTCGAGACGTACACAAGTGACTATACGGTGCAAGTATTGGTTGGATACTCTGTGGTCTACATTTTCATGCAGACTTTCATGATTCCAGGAACTGTGTTTATGTCTTTGTTAGCTGGAGCCCTTTTTGGTGTATTTAGAGGTTTGGCATTGGTCCTTTTCACTGCTACAGCTGGTGCTTCGTCTTGCTTTTTCTTGTCAAAACTTATTGGCCGACCTCTTGTTTTTTCAATGTGGCCGGACAAACTGACTTTCTTCCAAGCACAGGTGGCGAAAAGACGTCAGAACTTGTTGAATTACATGCTTTTCCTAAGAGTAACACCCACACTACCAAATACATTTATCAATGTGGCTTCACCAATTGTGGATATACCTTACCACACCTTCTTCTTGGCGACATTCATTGGACTGATCCCTGCTGCTTTTGTCACTGTCAGAGCTGGAATAGCTCTTGGAGAATTGCGATCAATAGGCGATTTGTATGACTTTCAGTCAATTGCCACACTTTTCCTAATTGGGATCGTTTCAATCACCCCTACCTTGATGAACAAGAACAAAACATAA

Protein sequence

MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLMNKNKT

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23278.1	Spo23278.1	mRNA

Homology

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BLAST of Spo23278.1 vs. NCBI nr
Match: gi|902198569|gb|KNA13710.1| (hypothetical protein SOVF_113810 [Spinacia oleracea])

HSP 1 Score: 485.3 bits (1248), Expect = 6.400e-134
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


		  
Query: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60
           MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL
Sbjct: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60

Query: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120
           EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV
Sbjct: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120

Query: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180
           LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN
Sbjct: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180

Query: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240
           TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI
Sbjct: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240

Query: 241 GIVSITPTLMNKNKT 256
           GIVSITPTLMNKNKT
Sbjct: 241 GIVSITPTLMNKNKT 255

[Close]

BLAST of Spo23278.1 vs. NCBI nr
Match: gi|731367326|ref|XP_010695550.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 451.1 bits (1159), Expect = 1.300e-123
Identity = 236/256 (92.19%), Postives = 248/256 (96.88%), Query Frame = 1


		  
Query: 1   MEKSEERLVC-EEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRT 60
           MEKSEERLV  E+K+SSK+PLTMWE+SAA  VV+AY LGLLGVYLTMP+SDYSFLKLPRT
Sbjct: 1   MEKSEERLVGNEDKSSSKFPLTMWEISAAFGVVIAYALGLLGVYLTMPSSDYSFLKLPRT 60

Query: 61  LEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL 120
           LEDLQILRDHLE+YTSDYT+QVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL
Sbjct: 61  LEDLQILRDHLESYTSDYTLQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL 120

Query: 121 VLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP 180
           VLFTAT GASSCFFLSKLIGRPLVFS+WPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP
Sbjct: 121 VLFTATTGASSCFFLSKLIGRPLVFSLWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP 180

Query: 181 NTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFL 240
           NTFINVASPIVD+PYH FFLATFIGLIPAA+VTVRAGIALGELRSIGDLYDF SIATLFL
Sbjct: 181 NTFINVASPIVDVPYHIFFLATFIGLIPAAYVTVRAGIALGELRSIGDLYDFNSIATLFL 240

Query: 241 IGIVSITPTLMNKNKT 256
           IGIVS+TPTLMNKNKT
Sbjct: 241 IGIVSVTPTLMNKNKT 256

[Close]

BLAST of Spo23278.1 vs. NCBI nr
Match: gi|720076980|ref|XP_010240889.1| (PREDICTED: uncharacterized membrane protein At4g09580-like [Nelumbo nucifera])

HSP 1 Score: 404.8 bits (1039), Expect = 1.100e-109
Identity = 203/254 (79.92%), Postives = 235/254 (92.52%), Query Frame = 1


		  
Query: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60
           MEK  E  +C  K  S++PL+ W+++    VVL++ LGLLGVYLT+PASDYSFLKLPRTL
Sbjct: 1   MEKRAEIAICSRK--SRFPLSFWDIAVVSGVVLSFLLGLLGVYLTLPASDYSFLKLPRTL 60

Query: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120
           ED+QILRDHLE YTSDYT+QVLVGY +VYIFMQTFMIPGT+FMSLLAGALFGVF+G+ LV
Sbjct: 61  EDIQILRDHLENYTSDYTIQVLVGYCMVYIFMQTFMIPGTIFMSLLAGALFGVFKGVTLV 120

Query: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180
           +FTATAGASSC+FLSKLIGRPLVFS+WPDKL+FFQAQVAKRR+ LLNYMLFLRVTPTLPN
Sbjct: 121 VFTATAGASSCYFLSKLIGRPLVFSLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPN 180

Query: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240
           TFINVASPIVD+PYH FFLATFIGLIPAA+VTVRAGIALG+L+S+GDLYDFQ+IAT+FLI
Sbjct: 181 TFINVASPIVDVPYHIFFLATFIGLIPAAYVTVRAGIALGDLQSLGDLYDFQAIATMFLI 240

Query: 241 GIVSITPTLMNKNK 255
           G+V++TPTLMNK+K
Sbjct: 241 GVVTVTPTLMNKSK 252

[Close]

BLAST of Spo23278.1 vs. NCBI nr
Match: gi|225427163|ref|XP_002278896.1| (PREDICTED: uncharacterized membrane protein At4g09580 [Vitis vinifera])

HSP 1 Score: 402.1 bits (1032), Expect = 7.100e-109
Identity = 208/255 (81.57%), Postives = 233/255 (91.37%), Query Frame = 1


		  
Query: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60
           ME+  ER  C+E    ++PLT WEV+ A  VV A+ LGL  VYLTMPASDYSFLKLPR+L
Sbjct: 1   MERRGER-DCKENVEGRFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSL 60

Query: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120
           ED+QILRDHLE YTSDYTVQVLVGY +VYIFMQTFMIPGTVFMSLLAG+LFGVF+G+ALV
Sbjct: 61  EDIQILRDHLEDYTSDYTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALV 120

Query: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180
           +FTATAGASSC+FLSKLIGRPLV  +WPDKL+FFQAQVAKRR+ LLNYMLFLRVTPTLPN
Sbjct: 121 VFTATAGASSCYFLSKLIGRPLVSFLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPN 180

Query: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240
           TFINVASP+VD+PYH FFLATFIGLIPAA+VTVRAGIALGELRS+GDLYDFQSIATLFLI
Sbjct: 181 TFINVASPMVDVPYHIFFLATFIGLIPAAYVTVRAGIALGELRSVGDLYDFQSIATLFLI 240

Query: 241 GIVSITPTLMNKNKT 256
           G+VS+TPTLM+KNK+
Sbjct: 241 GVVSVTPTLMSKNKS 254

[Close]

BLAST of Spo23278.1 vs. NCBI nr
Match: gi|590679628|ref|XP_007040635.1| (SNARE associated Golgi protein family [Theobroma cacao])

HSP 1 Score: 401.7 bits (1031), Expect = 9.300e-109
Identity = 205/247 (83.00%), Postives = 231/247 (93.52%), Query Frame = 1


		  
Query: 11  EEKTSSK--YPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRD 70
           EE   SK  +PL+ WEV+ A  VV+A+ LGL+GVYLTMPASDYSFLKLPR+LEDLQILRD
Sbjct: 5   EEMKGSKPRFPLSFWEVTVASTVVMAFVLGLVGVYLTMPASDYSFLKLPRSLEDLQILRD 64

Query: 71  HLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGA 130
           HLETYTSDYTVQVLVGY VVYIFMQTFMIPGTVFMSLLAGALFGVF+G+ALV+FTATAGA
Sbjct: 65  HLETYTSDYTVQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 124

Query: 131 SSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASP 190
           SSC+FLSKLIGRPLVFS+WPDKL+FFQAQVA+RR+ LLNYMLFLR+TPTLPNTFINVASP
Sbjct: 125 SSCYFLSKLIGRPLVFSLWPDKLSFFQAQVAQRRERLLNYMLFLRLTPTLPNTFINVASP 184

Query: 191 IVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPT 250
           IVD+PYH FF+AT IGLIPAA++TVRAGIALGEL+S+GDLYDF SIATLFLIG+VS+TPT
Sbjct: 185 IVDVPYHIFFMATIIGLIPAAYITVRAGIALGELQSVGDLYDFNSIATLFLIGVVSVTPT 244

Query: 251 LMNKNKT 256
           LM+K K+
Sbjct: 245 LMSKTKS 251

[Close]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2H9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113810 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 4.400e-134
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


		  
Query: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60
           MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL
Sbjct: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60

Query: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120
           EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV
Sbjct: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120

Query: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180
           LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN
Sbjct: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180

Query: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240
           TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI
Sbjct: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240

Query: 241 GIVSITPTLMNKNKT 256
           GIVSITPTLMNKNKT
Sbjct: 241 GIVSITPTLMNKNKT 255

[Close]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B9G4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125520 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 9.300e-124
Identity = 236/256 (92.19%), Postives = 248/256 (96.88%), Query Frame = 1


		  
Query: 1   MEKSEERLVC-EEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRT 60
           MEKSEERLV  E+K+SSK+PLTMWE+SAA  VV+AY LGLLGVYLTMP+SDYSFLKLPRT
Sbjct: 1   MEKSEERLVGNEDKSSSKFPLTMWEISAAFGVVIAYALGLLGVYLTMPSSDYSFLKLPRT 60

Query: 61  LEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL 120
           LEDLQILRDHLE+YTSDYT+QVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL
Sbjct: 61  LEDLQILRDHLESYTSDYTLQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLAL 120

Query: 121 VLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP 180
           VLFTAT GASSCFFLSKLIGRPLVFS+WPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP
Sbjct: 121 VLFTATTGASSCFFLSKLIGRPLVFSLWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLP 180

Query: 181 NTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFL 240
           NTFINVASPIVD+PYH FFLATFIGLIPAA+VTVRAGIALGELRSIGDLYDF SIATLFL
Sbjct: 181 NTFINVASPIVDVPYHIFFLATFIGLIPAAYVTVRAGIALGELRSIGDLYDFNSIATLFL 240

Query: 241 IGIVSITPTLMNKNKT 256
           IGIVS+TPTLMNKNKT
Sbjct: 241 IGIVSVTPTLMNKNKT 256

[Close]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Match: F6HT71_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g01630 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.900e-109
Identity = 208/255 (81.57%), Postives = 233/255 (91.37%), Query Frame = 1


		  
Query: 1   MEKSEERLVCEEKTSSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTL 60
           ME+  ER  C+E    ++PLT WEV+ A  VV A+ LGL  VYLTMPASDYSFLKLPR+L
Sbjct: 1   MERRGER-DCKENVEGRFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSL 60

Query: 61  EDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALV 120
           ED+QILRDHLE YTSDYTVQVLVGY +VYIFMQTFMIPGTVFMSLLAG+LFGVF+G+ALV
Sbjct: 61  EDIQILRDHLEDYTSDYTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALV 120

Query: 121 LFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPN 180
           +FTATAGASSC+FLSKLIGRPLV  +WPDKL+FFQAQVAKRR+ LLNYMLFLRVTPTLPN
Sbjct: 121 VFTATAGASSCYFLSKLIGRPLVSFLWPDKLSFFQAQVAKRRERLLNYMLFLRVTPTLPN 180

Query: 181 TFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLI 240
           TFINVASP+VD+PYH FFLATFIGLIPAA+VTVRAGIALGELRS+GDLYDFQSIATLFLI
Sbjct: 181 TFINVASPMVDVPYHIFFLATFIGLIPAAYVTVRAGIALGELRSVGDLYDFQSIATLFLI 240

Query: 241 GIVSITPTLMNKNKT 256
           G+VS+TPTLM+KNK+
Sbjct: 241 GVVSVTPTLMSKNKS 254

[Close]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Match: A0A061G6G3_THECC (SNARE associated Golgi protein family OS=Theobroma cacao GN=TCM_016549 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 6.400e-109
Identity = 205/247 (83.00%), Postives = 231/247 (93.52%), Query Frame = 1


		  
Query: 11  EEKTSSK--YPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRD 70
           EE   SK  +PL+ WEV+ A  VV+A+ LGL+GVYLTMPASDYSFLKLPR+LEDLQILRD
Sbjct: 5   EEMKGSKPRFPLSFWEVTVASTVVMAFVLGLVGVYLTMPASDYSFLKLPRSLEDLQILRD 64

Query: 71  HLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGA 130
           HLETYTSDYTVQVLVGY VVYIFMQTFMIPGTVFMSLLAGALFGVF+G+ALV+FTATAGA
Sbjct: 65  HLETYTSDYTVQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGA 124

Query: 131 SSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASP 190
           SSC+FLSKLIGRPLVFS+WPDKL+FFQAQVA+RR+ LLNYMLFLR+TPTLPNTFINVASP
Sbjct: 125 SSCYFLSKLIGRPLVFSLWPDKLSFFQAQVAQRRERLLNYMLFLRLTPTLPNTFINVASP 184

Query: 191 IVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPT 250
           IVD+PYH FF+AT IGLIPAA++TVRAGIALGEL+S+GDLYDF SIATLFLIG+VS+TPT
Sbjct: 185 IVDVPYHIFFMATIIGLIPAAYITVRAGIALGELQSVGDLYDFNSIATLFLIGVVSVTPT 244

Query: 251 LMNKNKT 256
           LM+K K+
Sbjct: 245 LMSKTKS 251

[Close]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Match: A0A022QZN8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a011639mg PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.400e-109
Identity = 206/241 (85.48%), Postives = 230/241 (95.44%), Query Frame = 1


		  
Query: 15  SSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYT 74
           S K+PLT WEV+ A  VVL + LGL+GVYLTMPASDY FLKLPR+L+DLQILRD+LE+YT
Sbjct: 23  SGKFPLTAWEVAVASGVVLGFLLGLVGVYLTMPASDYGFLKLPRSLQDLQILRDNLESYT 82

Query: 75  SDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFL 134
           SDYTVQVLVGY +VY+FMQTFMIPGTVFMSLLAG+LFGV +G+ALV+FTATAGASSCFFL
Sbjct: 83  SDYTVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGSLFGVIKGVALVVFTATAGASSCFFL 142

Query: 135 SKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPY 194
           SK+IGRPLVFS+WPDKLTFFQ+QVAKRR++LLNYMLFLRVTPTLPNTFINVASPIVDIPY
Sbjct: 143 SKIIGRPLVFSLWPDKLTFFQSQVAKRRESLLNYMLFLRVTPTLPNTFINVASPIVDIPY 202

Query: 195 HTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLM-NKN 254
           HTFFLATFIGLIPAAFVTVRAGIALGEL+S+GDLYDFQSIATLFLIGIV++TPTL+ NKN
Sbjct: 203 HTFFLATFIGLIPAAFVTVRAGIALGELQSVGDLYDFQSIATLFLIGIVTVTPTLIGNKN 262

[Close]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Match: Y4958_ARATH (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 8.700e-83
Identity = 148/240 (61.67%), Postives = 195/240 (81.25%), Query Frame = 1


		  
Query: 15  SSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYT 74
           S ++PL+ WE +    V L +  GL  +YLTMPA++Y  LK+PRT+ DL++L+++L +Y 
Sbjct: 45  SERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYA 104

Query: 75  SDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFL 134
           S+Y  + ++GY   YIFMQTFMIPGT+FMSLLAGALFGV RG  LV+  ATAGA SCFFL
Sbjct: 105 SEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFL 164

Query: 135 SKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPY 194
           SKL+GRPLV  +WP+KL FFQA++AKRR  LLNYMLFLR+TPTLPN FIN++SPIVDIP+
Sbjct: 165 SKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPF 224

Query: 195 HTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLMNKNK 254
           H FFLAT +GL+PA+++TVRAG+ALG+LRS+ DLYDF++++ LFLIG +SI P L+ + +
Sbjct: 225 HVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKR 284

[Close]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Match: TM41_DICDI (Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 5.900e-47
Identity = 99/240 (41.25%), Postives = 158/240 (65.83%), Query Frame = 1


		  
Query: 19  PLTMWEVSAALMVVLAYGLGL---LGVYLTMPA---SDYSFLKLPRTLEDLQILRDHLET 78
           PL +W      ++V+ +G+ +   + ++L  P+        ++LP+  +D+++L D L  
Sbjct: 96  PLPLW------LLVIVFGVSISVIVFLFLNFPSLSPQHKQLIRLPKNFKDVKLLSDILSQ 155

Query: 79  YTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCF 138
           YT D    V+  + V+Y F+Q F IPG+VF+S L+G LFG+  G  LV F AT GA+  +
Sbjct: 156 YTDDNYFIVITTFGVIYTFLQAFSIPGSVFLSFLSGGLFGLKVGFPLVCFVATLGATFSY 215

Query: 139 FLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDI 198
            +S  IGR LV  ++PDKL  F   ++++R NLLNY++FLR+TP LPN FIN+ASP++D+
Sbjct: 216 LISYYIGRNLVRKLFPDKLKLFSDSLSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDV 275

Query: 199 PYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLMNK 253
           P HTF + TFIG++PA F+ V+AGI +  +++  D++D +SI T+  + ++SI PTL+ K
Sbjct: 276 PIHTFAIGTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQK 329

[Close]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Match: TM41B_CHICK (Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.100e-40
Identity = 82/199 (41.21%), Postives = 129/199 (64.82%), Query Frame = 1


		  
Query: 54  LKLPRTLEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGV 113
           +K+PR ++D + L   L  Y   + VQVLV Y   Y+F+QTF IPG++F+S+L+G L+  
Sbjct: 64  IKIPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYVFLQTFAIPGSIFLSILSGFLYPF 123

Query: 114 FRGLALVLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLR 173
              L LV   +  GAS C+ LS L+GRP+V+    +K   +  QV + R++L+NY++FLR
Sbjct: 124 PLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSEQVERHREHLINYIIFLR 183

Query: 174 VTPTLPNTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQS 233
           +TP LPN FIN+ SP++++P   FF+ TF+G+ P +FV ++AG  L +L + G+   + S
Sbjct: 184 ITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNS 243

Query: 234 IATLFLIGIVSITPTLMNK 253
           +  L ++ I+SI P L  K
Sbjct: 244 LFVLMILAILSILPALFQK 262

[Close]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Match: TM41B_XENLA (Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.300e-40
Identity = 83/199 (41.71%), Postives = 128/199 (64.32%), Query Frame = 1


		  
Query: 54  LKLPRTLEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGV 113
           +K+PR ++D + L   L  Y   + V+VLV Y   YIF+QTF IPG++F+S+L+G L+  
Sbjct: 73  IKVPRDMDDAKALGKVLSKYKDTFYVEVLVAYFTTYIFLQTFAIPGSIFLSILSGFLYPF 132

Query: 114 FRGLALVLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLR 173
              L LV   +  GAS C+ LS L+GRP+V+    DK   +  QV + R +L+NY++FLR
Sbjct: 133 PLALFLVCLCSGLGASFCYLLSYLVGRPVVYKYLSDKAIKWSQQVERHRDHLINYIIFLR 192

Query: 174 VTPTLPNTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQS 233
           +TP LPN FIN+ SP++++P   FFL TFIG+ P +FV ++AG  L +L + G+   + S
Sbjct: 193 ITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNS 252

Query: 234 IATLFLIGIVSITPTLMNK 253
           +  L ++ ++SI P +  K
Sbjct: 253 VIILMVLAVLSILPAIFQK 271

[Close]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Match: TM41B_HUMAN (Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.000e-40
Identity = 82/199 (41.21%), Postives = 129/199 (64.82%), Query Frame = 1


		  
Query: 54  LKLPRTLEDLQILRDHLETYTSDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGV 113
           +K+PR ++D + L   L  Y   + VQVLV Y   YIF+QTF IPG++F+S+L+G L+  
Sbjct: 86  MKVPRDMDDAKALGKVLSKYKDTFYVQVLVAYFATYIFLQTFAIPGSIFLSILSGFLYPF 145

Query: 114 FRGLALVLFTATAGASSCFFLSKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLR 173
              L LV   +  GAS C+ LS L+GRP+V+    +K   +  QV + R++L+NY++FLR
Sbjct: 146 PLALFLVCLCSGLGASFCYMLSYLVGRPVVYKYLTEKAVKWSQQVERHREHLINYIIFLR 205

Query: 174 VTPTLPNTFINVASPIVDIPYHTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQS 233
           +TP LPN FIN+ SP++++P   FF+ TF+G+ P +FV ++AG  L +L + G+   + S
Sbjct: 206 ITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNS 265

Query: 234 IATLFLIGIVSITPTLMNK 253
           I  L ++ ++SI P +  K
Sbjct: 266 IFILMILAVLSILPAIFQK 284

[Close]

BLAST of Spo23278.1 vs. TAIR (Arabidopsis)
Match: AT4G17790.1 (SNARE associated Golgi protein family)

HSP 1 Score: 370.2 bits (949), Expect = 1.100e-102
Identity = 189/237 (79.75%), Postives = 215/237 (90.72%), Query Frame = 1


		  
Query: 18  YPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYTSDY 77
           Y L+ WEV+AA  VVL + LGL+ VYLTMP SDYSFLKLPR LEDLQILRD+LE YTSDY
Sbjct: 27  YSLSFWEVTAASGVVLGFILGLVCVYLTMPQSDYSFLKLPRNLEDLQILRDNLEIYTSDY 86

Query: 78  TVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFLSKL 137
           TVQVLVGY +VY+FMQTFMIPGTVFMSLLAGALFGV +G+ALV+ TATAGASSC+FLSKL
Sbjct: 87  TVQVLVGYCLVYVFMQTFMIPGTVFMSLLAGALFGVVKGMALVVSTATAGASSCYFLSKL 146

Query: 138 IGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPYHTF 197
           IGRPL+FS+WPDKL FFQ QVA+R+  LLNYMLFLR+TPTLPNTFINVASPIVD+PYH F
Sbjct: 147 IGRPLLFSLWPDKLVFFQDQVARRKDRLLNYMLFLRLTPTLPNTFINVASPIVDVPYHIF 206

Query: 198 FLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLMNKNK 255
           FLATFIGLIPAAFVTVRAG+ALGEL+S+GDLYDF S+ATL LIG++S+TPTL+ K +
Sbjct: 207 FLATFIGLIPAAFVTVRAGLALGELKSLGDLYDFSSMATLCLIGVLSVTPTLIGKKQ 263

[Close]

BLAST of Spo23278.1 vs. TAIR (Arabidopsis)
Match: AT4G09580.1 (SNARE associated Golgi protein family)

HSP 1 Score: 308.1 bits (788), Expect = 4.900e-84
Identity = 148/240 (61.67%), Postives = 195/240 (81.25%), Query Frame = 1


		  
Query: 15  SSKYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYT 74
           S ++PL+ WE +    V L +  GL  +YLTMPA++Y  LK+PRT+ DL++L+++L +Y 
Sbjct: 45  SERFPLSRWEFAVFFTVFLVFTTGLFCIYLTMPAAEYGKLKVPRTISDLRLLKENLGSYA 104

Query: 75  SDYTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFL 134
           S+Y  + ++GY   YIFMQTFMIPGT+FMSLLAGALFGV RG  LV+  ATAGA SCFFL
Sbjct: 105 SEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFL 164

Query: 135 SKLIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPY 194
           SKL+GRPLV  +WP+KL FFQA++AKRR  LLNYMLFLR+TPTLPN FIN++SPIVDIP+
Sbjct: 165 SKLVGRPLVNWLWPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPF 224

Query: 195 HTFFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQSIATLFLIGIVSITPTLMNKNK 254
           H FFLAT +GL+PA+++TVRAG+ALG+LRS+ DLYDF++++ LFLIG +SI P L+ + +
Sbjct: 225 HVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKR 284

[Close]

BLAST of Spo23278.1 vs. TAIR (Arabidopsis)
Match: AT1G71940.2 (SNARE associated Golgi protein family)

HSP 1 Score: 297.7 bits (761), Expect = 6.600e-81
Identity = 141/217 (64.98%), Postives = 185/217 (85.25%), Query Frame = 1


		  
Query: 17  KYPLTMWEVSAALMVVLAYGLGLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLETYTSD 76
           ++PL+ WE++ +L V L +  GL  +Y+TMPA+++  LKLPR+L DL++L+D+L  Y ++
Sbjct: 32  RFPLSRWELAVSLGVFLVFSSGLCCIYMTMPAAEFGKLKLPRSLADLRLLKDNLANYANE 91

Query: 77  YTVQVLVGYSVVYIFMQTFMIPGTVFMSLLAGALFGVFRGLALVLFTATAGASSCFFLSK 136
           Y  Q ++GY   YIFMQTFMIPGT+FMSLLAGALFGVF+G+ LV+F ATAGA+SCFFLSK
Sbjct: 92  YPAQFVLGYCATYIFMQTFMIPGTIFMSLLAGALFGVFKGVVLVVFNATAGATSCFFLSK 151

Query: 137 LIGRPLVFSMWPDKLTFFQAQVAKRRQNLLNYMLFLRVTPTLPNTFINVASPIVDIPYHT 196
           LIGRPL+  +WPDKL FFQA+++KRR  LLNYMLFLR+TPTLPN FIN+ASPIVD+P+H 
Sbjct: 152 LIGRPLITWLWPDKLRFFQAEISKRRDKLLNYMLFLRITPTLPNLFINLASPIVDVPFHV 211

Query: 197 FFLATFIGLIPAAFVTVRAGIALGELRSIGDLYDFQS 234
           FFLAT IGLIPAA++TVRAG+A+G+L+S+ DLYDF++
Sbjct: 212 FFLATLIGLIPAAYITVRAGLAIGDLKSVKDLYDFKT 248

The following BLAST results are available for this feature:

BLAST of Spo23278.1 vs. NCBI nr
BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
BLAST of Spo23278.1 vs. TAIR (Arabidopsis)

BLAST of Spo23278.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198569\|gb\|KNA13710.1\|	6.4e-134	100.	hypothetical protein SOVF_1138...	[more]
gi\|731367326\|ref\|XP_010695550.1\|	1.3e-123	92.1	PREDICTED: uncharacterized mem...	[more]
gi\|720076980\|ref\|XP_010240889.1\|	1.1e-109	79.9	PREDICTED: uncharacterized mem...	[more]
gi\|225427163\|ref\|XP_002278896.1\|	7.1e-109	81.5	PREDICTED: uncharacterized mem...	[more]
gi\|590679628\|ref\|XP_007040635.1\|	9.3e-109	83.0	SNARE associated Golgi protein...	[more]

BLAST of Spo23278.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2H9_SPIOL	4.4e-134	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B9G4_BETVU	9.3e-124	92.1	Uncharacterized protein OS=Bet...	[more]
F6HT71_VITVI	4.9e-109	81.5	Putative uncharacterized prote...	[more]
A0A061G6G3_THECC	6.4e-109	83.0	SNARE associated Golgi protein...	[more]
A0A022QZN8_ERYGU	8.4e-109	85.4	Uncharacterized protein OS=Ery...	[more]

BLAST of Spo23278.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
Y4958_ARATH	8.7e-83	61.6	Uncharacterized membrane prote...	[more]
TM41_DICDI	5.9e-47	41.2	Transmembrane protein 41 homol...	[more]
TM41B_CHICK	4.1e-40	41.2	Transmembrane protein 41B OS=G...	[more]
TM41B_XENLA	5.3e-40	41.7	Transmembrane protein 41B OS=X...	[more]
TM41B_HUMAN	7.0e-40	41.2	Transmembrane protein 41B OS=H...	[more]

BLAST of Spo23278.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G17790.1	1.1e-102	79.7	SNARE associated Golgi protein...	[more]
AT4G09580.1	4.9e-84	61.6	SNARE associated Golgi protein...	[more]
AT1G71940.2	6.6e-81	64.9	SNARE associated Golgi protein...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015414	Transmembrane protein TMEM64/TMEM41	PANTHER	PTHR12677	UNCHARACTERIZED	coord: 22..253 score: 1.8E
None	No IPR available	PANTHER	PTHR12677:SF29	SUBFAMILY NOT NAMED	coord: 22..253 score: 1.8E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0009744	response to sucrose
biological_process	GO:0006457	protein folding
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0010200	response to chitin
biological_process	GO:0009698	phenylpropanoid metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009750	response to fructose
biological_process	GO:0008152	metabolic process
biological_process	GO:0030488	tRNA methylation
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031515	tRNA (m1A) methyltransferase complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0003756	protein disulfide isomerase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016429	tRNA (adenine-N1-)-methyltransferase activity
molecular_function	GO:0003677	DNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo17726	0.68	Barchart \| Table
Spo23382	0.68	Barchart \| Table
Spo09152	0.68	Barchart \| Table
Spo00677	0.67	Barchart \| Table
Spo13171	0.66	Barchart \| Table
Spo01628	0.66	Barchart \| Table
Spo13583	0.66	Barchart \| Table
Spo25985	0.65	Barchart \| Table
Spo07685	0.65	Barchart \| Table
Spo13499	0.65	Barchart \| Table
Spo25307	0.65	Barchart \| Table