Spo23326 (gene)

Overview
NameSpo23326
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 43352772 .. 43355837 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGTCTCCCTCATCCTCAATCAATCATTCAACTGAATCCCCTTTTCTTCATCTCTATTCTCTCCCCTCTACTTTCAGATTTGACTGCTAATTTGAATGAAAATCTCACAGCAATGAGGAAAAACTTCGTGTACCAGAGTTGGTCTTCTACGGAGGTCCATCGGTGACGGTAAACACAACCTCTAAGAAGTTCTGAGCTCTAATTCGTCGTTTATCTTTTAATTTCCCTTTTAAATTTCGATAATTTTCTATCTAATTAATTGTATGATAGAAATTTAGGGTTTATCCGGATGAATTTAATTGGGGGAGAAACTAAAAGACGAGATGACGATAGAAATTCAGTCTGTCAATCCACTGATCCCATTATATGGGTTTGATGATACAGCGAATCTCGACAGGTTCTGATTGTCTTATTTTTCTATCTCCCAAATTTCCATCTCTTTCAATTAAATCGTCGTTTTTTCGAAGTGTCGTAAACATATTTATTGAAAATTGAGGGTATATGATGAATCCCATTAATCAAATGGGTATTGTGCGTCTGAATTTACATTGATGCTTTATCACCTTGGAGAACTGATCCCCTTTTATTAGATTTGCTATATTTTTTGTAAAAATTACATCTTTTTTATCAAATTTTCAAGAAAATCGGCATTTGATGAGTCAATTTTTCAATGGGTAATTTGCGTCTGAATTTAATTGATGCTAACCTGAAAATCTGATGCCTACAAAATTCAATATTGTTTTGAAATTTATTTTAATGGGTCAATGATGTTTTTTGTACTGAAAATTCAGAAAATAAATACTGTTTGACAAAAATTTCAAAATGCTGAGATCCCAACGTAAATCTGTAGTTTTGGCATTAGTTTCCGAATTATTAACTTTGATTTGAGCTATAATTAATTGTAAAAAGAGATTGCAATGAGGATACAACGCTCCCTCTTCTGAGTTAAAACTGAGGTCAATTGCTGGCAGAATCGAACCAATTTAACTAGCCACCACTGAGCAATCTCTGTTTTTTTAACAAAATTATATTGAAGTCAAGTGTTTCTATTAAACAAAAGTATTGAAATTAAAGTTTAAGCATCATGTGATGAGATTGGAATACTATCTTAGGACACCTTCCAACACAGTCCGACAATGGCTGTGAATGAGAAAGAAAATCCTTTCTGATGATGCTTCAATCTTTCCACTTGTATTAGAATTAGTAGCTGATTAATCCTTAATGATGATTTGGTTTAGTTCTTTGAAGGTTTGGCAATGAGGATTAGTTTGCACAGCTTGAATGCCAGTTCTGCTTCAGAAAATTCTTGATAGAAAAAGCTGTTTATAAAATCCTGAGCTAGATATGTCCATTCTTTTTTACAAGAATTTAACACGTTTTCTAACCTAAACCAGTAAAAAAACCATCTATTTTATTGAATAGTAACATTTCTGTATTAGAAATTTTTGAGTGATATTCTGATTGTCACGGATCAATGATGTTTTTAGTACTGAAAATCACTGAATTTTAAATATTGATGAACTTAAAAATGCTGAGATCCTGTTTTTAATCCTGTTAAAGTTGAGGACAACTGCTGGCAGAATCGAACCAATATAACTAGCCACCACTGAGCAATCTCTTTTCATCAATGGTTCATGGATTTACTTAGTGAAAAATCATCTTTTTTATATATGAGTAATTTGTAACAAGGAAAATTAAATTAAGTTTTTGAAGTCTGTTTTTGTTTGTTAATATGAGCATATGATGAGATTGGAATATTATCTTAGGACACCTTCCAACACAGTCCGACAATGGCTGTGAATGAGAAAGAAAATCCGTTCTGATGATGCATTTTAAGATAATTGGAAATATTATGTAATTAATATAATTAATTCTATTTGGGAAATGAAAATGGTCCGATGCCACGTCGTTAATAGCAAAATAGCTATGATTATCGATGCTATGATTAGACCAAGATTAAATTTTTATTAGTGTTTTGCATTTTGATAGGAATCCGTTGGTTTTATATTCAATGATTAAACGGAGCCGTTTTGTGCAATTACATTTGTAATTATGGAAACTATAATCAAAGTTGTTTAGCCATTGATGAAATTATAATCAAAGTTGGAATTACCGTCTGATATTGATGAACGACTCTCTTTCTGAGGCTAATATTTTAAAGTTTTGATAATTTTGATAATGGGATGTTAATTAAAGAGGTCGATGATGTTAAATTTAAGGCTTGTTTCTCAAAACATTCGCAGTGGCCGACTAAGAGCTTTCGTCTGCGCAGACTTGAGAGCTAATGCTGTTTTATCCTTCCTTGGATGTCTGAGACCTCTTTAATTTTTCATTTTTTGTTCAATTTTTTTCCACATAAATGTCCAATGTATCGTTATTCATGAGTTAATGCCATAATTTGATATGGGTATGAACAATTTGACACTTCGATTAAATGTATATGGTTGGATTGATTGGATTTTGTTGTATAAGCGATTTAAATTTTCGAAATGCAGTTTCTTTATGATAAATTATCAATCTATTGTTCACAACAGCAGAATTAACAGGTCTATTTATTGAAAAAGGGTGTAAATTCACTAATTTTGACATTTTTAAGCATTTTAAGCTGGAAATCTCTCCTATTAATGGTTATTTCTTTGAATGTTTTATGTTGGAAGTAGCCATTGAAATATATGCATGTTGCACCCTGGGCTTCTCTGAACAATAAAAGTTGACGATGTTAAGTCCCAATGCTCGTGCTATATACCATTTGCCCTTCGTGTTGCAGTTCGGCTGACTCTAAACGGCTGATTTGTGTCTTAATTAATGGCTAAATCCATGTCTTCTGCAAATTAATCAAAGAATCGTTGCAGTTAACTACTGATTTTTAGAGAATTTATGGGCCATGATTAGTAATTTATCCGCGCTTCTGAGATGCAGTCGATGAAGTAGAGGATGAAAAATAATGGTTGAATTTCTTAATATGAGCCCATGTATCCTTCAAACGCTCTGTTTTCAACATTTTTCCAGTTTTTAACTTTTCAAATGCAATGAGGATTAGTTTTCACAGCTTGAATGCCAG

mRNA sequence

ATGAATCGTCTCCCTCATCCTCAATCAATCATTCAACTGAATCCCCTTTTCTTCATCTCTATTCTCTCCCCTCTACTTTCAGATTTGACTGCTAATTTGAATGAAAATCTCACAGCAATGAGGAAAAACTTCGTGTACCAGAGTTGGTCTTCTACGGAGGTCCATCGAAATTTAGGGTTTATCCGGATGAATTTAATTGGGGGAGAAACTAAAAGACGAGATGACGATAGAAATTCAGTCTGTCAATCCACTGATCCCATTATATGGGTTTGATGATACAGCGAATCTCGACAGGTTCTGATTGTCTTATTTTTCTATCTCCCAAATTTCCATCTCTTTCAATTAAATCGTCGTTTTTTCGAAGTGTCGTAAACATATTTATTGAAAATTGAGGGTATATGATGAATCCCATTAATCAAATGGGTATTGTGCGTCTGAATTTACATTGATGCTTTATCACCTTGGAGAACTGATCCCCTTTTATTAGATTTGCTATATTTTTTGTAAAAATTACATCTTTTTTATCAAATTTTCAAGAAAATCGGCATTTGATGAGTCAATTTTTCAATGGGTAATTTGCGTCTGAATTTAATTGATGCTAACCTGAAAATCTGATGCCTACAAAATTCAATATTGTTTTGAAATTTATTTTAATGGGTCAATGATGTTTTTTGTACTGAAAATTCAGAAAATAAATACTGTTTGACAAAAATTTCAAAATGCTGAGATCCCAACGTAAATCTGTAGTTTTGGCATTAGTTTCCGAATTATTAACTTTGATTTGAGCTATAATTAATTGTAAAAAGAGATTGCAATGAGGATACAACGCTCCCTCTTCTGAGTTAAAACTGAGGTCAATTGCTGGCAGAATCGAACCAATTTAACTAGCCACCACTGAGCAATCTCTGTTTTTTTAACAAAATTATATTGAAGTCAAGTGTTTCTATTAAACAAAAGTATTGAAATTAAAGTTTAAGCATCATGTGATGAGATTGGAATACTATCTTAGGACACCTTCCAACACAGTCCGACAATGGCTGTGAATGAGAAAGAAAATCCTTTCTGATGATGCTTCAATCTTTCCACTTGTATTAGAATTAGTAGCTGATTAATCCTTAATGATGATTTGGTTTAGTTCTTTGAAGGTTTGGCAATGAGGATTAGTTTGCACAGCTTGAATGCCAGTTCTGCTTCAGAAAATTCTTGATAGAAAAAGCTGTTTATAAAATCCTGAGCTAGATATGTCCATTCTTTTTTACAAGAATTTAACACGTTTTCTAACCTAAACCAGTAAAAAAACCATCTATTTTATTGAATAGTAACATTTCTGTATTAGAAATTTTTGAGTGATATTCTGATTGTCACGGATCAATGATGTTTTTAGTACTGAAAATCACTGAATTTTAAATATTGATGAACTTAAAAATGCTGAGATCCTGTTTTTAATCCTGTTAAAGTTGAGGACAACTGCTGGCAGAATCGAACCAATATAACTAGCCACCACTGAGCAATCTCTTTTCATCAATGGTTCATGGATTTACTTAGTGAAAAATCATCTTTTTTATATATGAGTAATTTGTAACAAGGAAAATTAAATTAAGTTTTTGAAGTCTGTTTTTGTTTGTTAATATGAGCATATGATGAGATTGGAATATTATCTTAGGACACCTTCCAACACAGTCCGACAATGGCTGTGAATGAGAAAGAAAATCCGTTCTGATGATGCATTTTAAGATAATTGGAAATATTATGTAATTAATATAATTAATTCTATTTGGGAAATGAAAATGGTCCGATGCCACGTCGTTAATAGCAAAATAGCTATGATTATCGATGCTATGATTAGACCAAGATTAAATTTTTATTAGTGTTTTGCATTTTGATAGGAATCCGTTGGTTTTATATTCAATGATTAAACGGAGCCGTTTTGTGCAATTACATTTGTAATTATGGAAACTATAATCAAAGTTGTTTAGCCATTGATGAAATTATAATCAAAGTTGGAATTACCGTCTGATATTGATGAACGACTCTCTTTCTGAGGCTAATATTTTAAAGTTTTGATAATTTTGATAATGGGATGTTAATTAAAGAGGTCGATGATGTTAAATTTAAGGCTTGTTTCTCAAAACATTCGCAGTGGCCGACTAAGAGCTTTCGTCTGCGCAGACTTGAGAGCTAATGCTGTTTTATCCTTCCTTGGATGTCTGAGACCTCTTTAATTTTTCATTTTTTGTTCAATTTTTTTCCACATAAATGTCCAATGTATCGTTATTCATGAGTTAATGCCATAATTTGATATGGGTATGAACAATTTGACACTTCGATTAAATGTATATGGTTGGATTGATTGGATTTTGTTGTATAAGCGATTTAAATTTTCGAAATGCAGTTTCTTTATGATAAATTATCAATCTATTGTTCACAACAGCAGAATTAACAGGTCTATTTATTGAAAAAGGGTGTAAATTCACTAATTTTGACATTTTTAAGCATTTTAAGCTGGAAATCTCTCCTATTAATGGTTATTTCTTTGAATGTTTTATGTTGGAAGTAGCCATTGAAATATATGCATGTTGCACCCTGGGCTTCTCTGAACAATAAAAGTTGACGATGTTAAGTCCCAATGCTCGTGCTATATACCATTTGCCCTTCGTGTTGCAGTTCGGCTGACTCTAAACGGCTGATTTGTGTCTTAATTAATGGCTAAATCCATGTCTTCTGCAAATTAATCAAAGAATCGTTGCAGTTAACTACTGATTTTTAGAGAATTTATGGGCCATGATTAGTAATTTATCCGCGCTTCTGAGATGCAGTCGATGAAGTAGAGGATGAAAAATAATGGTTGAATTTCTTAATATGAGCCCATGTATCCTTCAAACGCTCTGTTTTCAACATTTTTCCAGTTTTTAACTTTTCAAATGCAATGAGGATTAGTTTTCACAGCTTGAATGCCAG

Coding sequence (CDS)

ATGAATCGTCTCCCTCATCCTCAATCAATCATTCAACTGAATCCCCTTTTCTTCATCTCTATTCTCTCCCCTCTACTTTCAGATTTGACTGCTAATTTGAATGAAAATCTCACAGCAATGAGGAAAAACTTCGTGTACCAGAGTTGGTCTTCTACGGAGGTCCATCGAAATTTAGGGTTTATCCGGATGAATTTAATTGGGGGAGAAACTAAAAGACGAGATGACGATAGAAATTCAGTCTGTCAATCCACTGATCCCATTATATGGGTTTGA

Protein sequence

MNRLPHPQSIIQLNPLFFISILSPLLSDLTANLNENLTAMRKNFVYQSWSSTEVHRNLGFIRMNLIGGETKRRDDDRNSVCQSTDPIIWV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23326.1Spo23326.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23326.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo23326.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo23326.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo23326.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0010332 response to gamma radiation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008152 metabolic process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0032940 secretion by cell
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0000165 MAPK cascade
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007267 cell-cell signaling
biological_process GO:0007276 gamete generation
biological_process GO:0009561 megagametogenesis
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0006302 double-strand break repair
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0016567 protein ubiquitination
biological_process GO:0051302 regulation of cell division
biological_process GO:0032875 regulation of DNA endoreduplication
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009616 virus induced gene silencing
biological_process GO:0030048 actin filament-based movement
biological_process GO:0051645 Golgi localization
biological_process GO:0051646 mitochondrion localization
biological_process GO:0060151 peroxisome localization
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0008033 tRNA processing
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0008295 spermidine biosynthetic process
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006570 tyrosine metabolic process
biological_process GO:0006897 endocytosis
biological_process GO:0007165 signal transduction
biological_process GO:0048767 root hair elongation
biological_process GO:0009737 response to abscisic acid
biological_process GO:0048868 pollen tube development
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0009553 embryo sac development
biological_process GO:0035335 peptidyl-tyrosine dephosphorylation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0016020 membrane
cellular_component GO:0031461 cullin-RING ubiquitin ligase complex
cellular_component GO:0005819 spindle
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0005768 endosome
cellular_component GO:0005886 plasma membrane
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0005488 binding
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004518 nuclease activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0004725 protein tyrosine phosphatase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
RNA-Seq Expression