Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTACAAGGTGAAAAGTCCCTTATTTTTTACGGTTCTCATTTCTTTGAAAAACATTGCCAAAATGGGCCGAAATTTGACACTATTGATTCCACAATCGGGTAACCCGCCCCAAACACAAACAACGGGCTAATCAACCGCCGTCTTCAACCTTTGCTTCCCCCTTTCTCCTTCTCCTTCTCCTTCATCTATCTCTCTCCTCCAACACAGGCTTCAATTTCACAACAATGGCGAAGAAATCAAAGGAACAACCCAAAAAACCTCCAACTCCAAAATCTAAAAAAGTCCCTGCAACGTCTGTCAACATTTTAAACCAACTATTTGGCGAAACCCCTGATGCCGAACCCTCTAATTCCTTGTTTTCCTCTGATAATCCCTTCCGCAGAAAACCAACTGATTCATCACAGACACCCCAGATTCCAGAAAACCCTAAAAATGACGAGGTTGCGAACCCCGACGTTGCGACTAAGAAGAGGAACAAGGACGACATTTCTCCAGAGGAGGTTAAGAAATTGAGGAAAGAGAAATTGGAGAAGAACCCTAATTTGGAAGCTGTTGTTAATGGGTCGGAATTAAATGTGAATTTGGAGGAGAAGAAGGAGAAGAAGAAAAGGAAGAGAGATGAGTTAGAGAGAGATTATGAGGTAAAGAAGTATGGAGCTGCACCGGATGAGGAAGAAGAGAAGAAAGAGAAAGTGGGTGTTGGGAAGAAGAGGAAGGCGGTGGATAATCCTGCAGATTTGATGGTTTCCCAAGAAGGGTATGATGATGAGAGTAAGCTTTTGAGGACTGTTTTTGTTGGGAATTTGCCTTTGAAGGTTAAGAAGAAGGCTTTGTTGAAGGAGTTTAGTGTTTTTGGGGAGATTGACTCTGTTCGAATTCGTTCTGTTCCTACAGTGGATGTGAGTTCTATGGCATTTTTCTTTGTTCTTTGGTTTGATTTTGATTTGGTTTTGTGTAATTGAATTGTTTTTTTGATTGTTTTTGTTGTTATAGAGCAAGAAACCTAAGAAGGCTTTGGTTATCAATGGGAAACTCAATGAGTCAGCTGATAGGTAATGGCAAATTCCTTTTACGTTTATGAAAGATGAACTTATTGTTATACTTCATTTATTTGGGTTACGTTCTTGTTGTGAATAAGAGATGAACCTCTGCAATGTAGTGTACTGGGGAAATGCTCCATCAAAATGTGATGACATTGCATTGATCTTGTTGATTGCTTTGATTCTACCATGAAAATGAGTAGTTTGAAACTAAATAATTAGAAGAGATTGACATAGGTAGAAGAACACAGAACAGTTTAAGATAACTAGTGGCGTGATTGGTAGAGAAATGCATTTGATATGAACAATGTGTTGACCTTGTTGATTGCTTTGATTCTACCATGAAATTGAGTAGTTTGAAACTAAATAATTAGGAGAGATTTAGATAGGTAGAAGAACACGGAACAGTTTAAGATAACTAGTGGCATGATTGGTAGAGAAATGCATTTGATGACAACAACATTTGTGTTGGTGGGAAAGAAGTTTGAATTCCTTGTCTGGTTTTTAAATATGGGAATGAGGATGGGTTCTATAGGAATTGTTGATCAGGATTCAGGTGAACTCCTTGTATGGTTTTTTACACTGTTGTTCCCTCTCCCTCAACTTTGATTCCGTTCTAGTGAACGCATGAAACGGGCATGAAGGAATAAAGTCTTTTCTTTCTGTAGAAAACATGCTAAGGGAAGTTCAGATTCAGATTTTTTAGGTGAATAAAACGCATAAGCATTTATTACTCGATATATTGGCTGATTATCTGATTTTCTCATACATTGGAGATCTTGTTTGTGATGTGTTGTCTTCTTCATGTGTTCATCAATTTAGATTATCCATGTGGAATTTCTTCATATTTTCTGATGAACACCTTTTTGCAGCGTCAATGCCTACGTTGTTTTCAAAACAGAGCAAGCCGCAGAAGCATCCTTGACCCTTAATATGTCTATGGTATGCATGGTGTTGGTTGAGAATTTATCTGCTAATGTTTTTATCTTTTTTTCCCTTGGTGCAATTTCTAGTTGACTGCCTTTCCTTTTTTTATTGACCCGTTATTAACTTTGATACAGATTGGAGGAAATCATATCCGTGTTGACAGGGCGTGCCCACCTAGGAAGAAATTGAAAGGAGATGACTCTTCTGCTACTCTTTATAATAACAAGAGGACAGTTTTCGTGGGTAATTTGCCATTTGATGTCAAGGTATATGCTTGATATGTCTTCCCTCCTTTTTATCATTTTTTTTAAATTTCTATGTTGGTCTTATTGCTGATGTTGATCATTGTCTTCTTTCCAAACAGGATGAGGAACTTTATCAGTTGTTTTGCGGCATCAAACAGCTGGAATCTGGCGTTGAGGCTGTTCGAGTTATTAGGGACCGTCACACAAGTCTTGGGAAAGGGATAGCGTACGTCATGTTCAAAACAAGGGTATGTCTCGTGCTCTGTCTCTGTAATATTCAATTATTCATAATACGTGCTTGTGAAATATTAGGTTGATACAGGGAGAGGTGGTACATCTGTAACTTAAAAGATACTCTGTCTCACTGTACAAATAGACAGATTTAACTATTTATTGTGATTCTGCATCGGTTTGCTACTGCATATTAATTCAGAATGCAGAGTAGTGAGAACATCATAAAAAGGTTTCTTTTGTATACTTTACTATTCCAGTTCCCTTTGCATTATGCTGGGACTTGGGAGCTTGGGTCCATGGGAAGCTTTGGCACTTGTCAGGTTGTTATATTCGGCCGTCATTAAAGAGCTATGCTTTGTAATTGAACAGACAGGTTTGTGAACTTCTGCACTAGGCCTAGTTGTAGGCTGTAGGTGTTAGGATTAAGTTCTCACACTCTTTTCAGATTCCAAGATTTTTTTTCCTCACCTTATGTGAATCTTGAAAGTAGGTCTATTTTGTTGCATGAAGTCTATCAGCAATCAACATTAGTCACTTTGCTAATATTAGTTGTAAATAGCCAAATTTGATATATTATATGTGGTACTAATTGAAGTGGTAAAATTCTTTCCAGGTATGATATCTGTCTTGTTTATTAATTTTTTACCATAAGTGAATTATGCTACTTATCAAATATTTTCTTCTGTAGTAAGATATAAAGATCCATGTGGTTAATCTCTCACGTTCTTTGGCGTTAGTATTAGTCTTTCATATCTTTCATTTTGCATGTATTGGAGCTTGCATGGCCGAGCCTTTTCTTTTCTCCACTTCCCTTGCCTGTCATTTAGGTGATAATATACATTGGTAATGACAAGTATACGTCATTATGGCAATGTGTGAGTTATTACCTTTGTTCCAAAACATCACTTCATCTTTTTCTTTCTTTCTTTCTTTGATTTGGCTAATGCTTTTACGATCGGACAATACTCTGTATGCTTTGGCATGTGAACTCTTATGCCACGAGTAATGCTTAGTATAGCCTTCCTTGCATAGCCTCATTAATGGAAGATTTATTTTAAGAATGAAGGTCTTGACTATGTCAATTTCTCTAGCATCTCCTTTCTAGCCTTTTCTGTCATTGACCCTTAGAATTAGTGATAGTAGTATCTCTGTCGATCTATGGTGCAGATTATTTGCATGATAGTCACATTTGTTTTGATGCTTGATAGATTATTTTTCACATAATACTACCTCTGTTTTAAAATGATCATTACACTTTCTGTTTTAGTCCGTTTCATAATGTTCTTCACACTTGCTTTATTCTATTTTTTGACATAAAAATTTACTACCTTACCCTTCTTACTCAATATTTACAATTTCCCACTCACTTTTCTTACTTCATTCATTTTTTTTCTTATGCCATCCAAAATTTTACACATTTCTCTTACTTTATCCATATTTTATTATTTTCAACCAACTTTTCCATTTTTGTGTTAGTATGTTTGCAAATAGTAACCGTAACGATCTTTATGAAACGGAGGTAGTGTGTATAGAACACTCTTCGACTGGGTGAAAAGTGGAGTTTAAGCTCATCCTTGTTTGCTTTTTAATTTACTTCATTGCTTGTTTATTAAGCATTGGTAGTTATATTTTTGTATTTTTTAGGTAATGACAAATTCTTAATAATGTGTTTCTTGTACAGGAAGATGCAAACATTGTTTGTAAAAAAACCTTGAGACTCCGAGACCGCGAACTGAGAATTAGTCATGTCAAGTCAATTACTCAATCCACCACACCTACCAAGAGGAAAAATCCATTTTCAGGTGACTCAGAAAATTCCCCTGCTAAGAAATTTTCATCGGATTCGAAGACTCGTACCCCTGCAAAGAAAGGCGCAAAGACTCCTCCACAGAGTCGGTACAGGGTAACCGCCAGTGGGGACACCTCGTACCAAGGTTTACGTGCGAGTAAATCCGGTGAAAGTAAGAAACAAACCCCTGTAAGAAGATTTACTGCTACAACACCAGCTTCTGTAAATTCTGGAAAGAATAGTGGAGTCAAAATTAAACAGAGAGTTGATAAAAGACCATCAGTAGCAGCAAGAAAGGCTAAAGCAATTGCTATGCAGAATGGTGGTGCTTCTTATAAACCAGGGAATAACAAAAGAAAGATGGATGCTAGAACTCCCACAAGTTCTAACAAGAGAAAGAAGGTTATGAAGTCTAAGTAAAAGAGTTTTTAGTGTATAATTGGCTCTTTTATAATCTGTTTAAGTTTTTACTAAAAAAGAGAGACTTCTGTAGTTTGATCTAAACAGTTTATACAATGTCTAAATCGATACATTGACATCTGATTCTTATGATGCTGTAAAATCATAGTTGTGTTTTTTTTTCCAAGATTTCGACTTTCTTTCATGTACACTTGTGAATTTGCATTTTGTGTTTCATTTGTAGAATCACAAGTTCTAGCTAGCCAGTAGATGGTTCACCATGTAAGGAAAAATGATACTGTAATCATTGTCTATTTGTCTCTGTAAGCATCTGAGACAAAAATTTAAGCTCAGCATTTAAGAAAAAACAACTAAATTTCCGAAAACTGCC GTTACAAGGTGAAAAGTCCCTTATTTTTTACGGTTCTCATTTCTTTGAAAAACATTGCCAAAATGGGCCGAAATTTGACACTATTGATTCCACAATCGGGTAACCCGCCCCAAACACAAACAACGGGCTAATCAACCGCCGTCTTCAACCTTTGCTTCCCCCTTTCTCCTTCTCCTTCTCCTTCATCTATCTCTCTCCTCCAACACAGGCTTCAATTTCACAACAATGGCGAAGAAATCAAAGGAACAACCCAAAAAACCTCCAACTCCAAAATCTAAAAAAGTCCCTGCAACGTCTGTCAACATTTTAAACCAACTATTTGGCGAAACCCCTGATGCCGAACCCTCTAATTCCTTGTTTTCCTCTGATAATCCCTTCCGCAGAAAACCAACTGATTCATCACAGACACCCCAGATTCCAGAAAACCCTAAAAATGACGAGGTTGCGAACCCCGACGTTGCGACTAAGAAGAGGAACAAGGACGACATTTCTCCAGAGGAGGTTAAGAAATTGAGGAAAGAGAAATTGGAGAAGAACCCTAATTTGGAAGCTGTTGTTAATGGGTCGGAATTAAATGTGAATTTGGAGGAGAAGAAGGAGAAGAAGAAAAGGAAGAGAGATGAGTTAGAGAGAGATTATGAGGTAAAGAAGTATGGAGCTGCACCGGATGAGGAAGAAGAGAAGAAAGAGAAAGTGGGTGTTGGGAAGAAGAGGAAGGCGGTGGATAATCCTGCAGATTTGATGGTTTCCCAAGAAGGGTATGATGATGAGAGTAAGCTTTTGAGGACTGTTTTTGTTGGGAATTTGCCTTTGAAGGTTAAGAAGAAGGCTTTGTTGAAGGAGTTTAGTGTTTTTGGGGAGATTGACTCTGTTCGAATTCGTTCTGTTCCTACAGTGGATAGCAAGAAACCTAAGAAGGCTTTGGTTATCAATGGGAAACTCAATGAGTCAGCTGATAGCGTCAATGCCTACGTTGTTTTCAAAACAGAGCAAGCCGCAGAAGCATCCTTGACCCTTAATATGTCTATGATTGGAGGAAATCATATCCGTGTTGACAGGGCGTGCCCACCTAGGAAGAAATTGAAAGGAGATGACTCTTCTGCTACTCTTTATAATAACAAGAGGACAGTTTTCGTGGGTAATTTGCCATTTGATGTCAAGGATGAGGAACTTTATCAGTTGTTTTGCGGCATCAAACAGCTGGAATCTGGCGTTGAGGCTGTTCGAGTTATTAGGGACCGTCACACAAGTCTTGGGAAAGGGATAGCGTACGTCATGTTCAAAACAAGGGAAGATGCAAACATTGTTTGTAAAAAAACCTTGAGACTCCGAGACCGCGAACTGAGAATTAGTCATGTCAAGTCAATTACTCAATCCACCACACCTACCAAGAGGAAAAATCCATTTTCAGGTGACTCAGAAAATTCCCCTGCTAAGAAATTTTCATCGGATTCGAAGACTCGTACCCCTGCAAAGAAAGGCGCAAAGACTCCTCCACAGAGTCGGTACAGGGTAACCGCCAGTGGGGACACCTCGTACCAAGGTTTACGTGCGAGTAAATCCGGTGAAAGTAAGAAACAAACCCCTGTAAGAAGATTTACTGCTACAACACCAGCTTCTGTAAATTCTGGAAAGAATAGTGGAGTCAAAATTAAACAGAGAGTTGATAAAAGACCATCAGTAGCAGCAAGAAAGGCTAAAGCAATTGCTATGCAGAATGGTGGTGCTTCTTATAAACCAGGGAATAACAAAAGAAAGATGGATGCTAGAACTCCCACAAGTTCTAACAAGAGAAAGAAGGTTATGAAGTCTAAGTAAAAGAGTTTTTAGTGTATAATTGGCTCTTTTATAATCTGTTTAAGTTTTTACTAAAAAAGAGAGACTTCTGTAGTTTGATCTAAACAGTTTATACAATGTCTAAATCGATACATTGACATCTGATTCTTATGATGCTGTAAAATCATAGTTGTGTTTTTTTTTCCAAGATTTCGACTTTCTTTCATGTACACTTGTGAATTTGCATTTTGTGTTTCATTTGTAGAATCACAAGTTCTAGCTAGCCAGTAGATGGTTCACCATGTAAGGAAAAATGATACTGTAATCATTGTCTATTTGTCTCTGTAAGCATCTGAGACAAAAATTTAAGCTCAGCATTTAAGAAAAAACAACTAAATTTCCGAAAACTGCC ATGGCGAAGAAATCAAAGGAACAACCCAAAAAACCTCCAACTCCAAAATCTAAAAAAGTCCCTGCAACGTCTGTCAACATTTTAAACCAACTATTTGGCGAAACCCCTGATGCCGAACCCTCTAATTCCTTGTTTTCCTCTGATAATCCCTTCCGCAGAAAACCAACTGATTCATCACAGACACCCCAGATTCCAGAAAACCCTAAAAATGACGAGGTTGCGAACCCCGACGTTGCGACTAAGAAGAGGAACAAGGACGACATTTCTCCAGAGGAGGTTAAGAAATTGAGGAAAGAGAAATTGGAGAAGAACCCTAATTTGGAAGCTGTTGTTAATGGGTCGGAATTAAATGTGAATTTGGAGGAGAAGAAGGAGAAGAAGAAAAGGAAGAGAGATGAGTTAGAGAGAGATTATGAGGTAAAGAAGTATGGAGCTGCACCGGATGAGGAAGAAGAGAAGAAAGAGAAAGTGGGTGTTGGGAAGAAGAGGAAGGCGGTGGATAATCCTGCAGATTTGATGGTTTCCCAAGAAGGGTATGATGATGAGAGTAAGCTTTTGAGGACTGTTTTTGTTGGGAATTTGCCTTTGAAGGTTAAGAAGAAGGCTTTGTTGAAGGAGTTTAGTGTTTTTGGGGAGATTGACTCTGTTCGAATTCGTTCTGTTCCTACAGTGGATAGCAAGAAACCTAAGAAGGCTTTGGTTATCAATGGGAAACTCAATGAGTCAGCTGATAGCGTCAATGCCTACGTTGTTTTCAAAACAGAGCAAGCCGCAGAAGCATCCTTGACCCTTAATATGTCTATGATTGGAGGAAATCATATCCGTGTTGACAGGGCGTGCCCACCTAGGAAGAAATTGAAAGGAGATGACTCTTCTGCTACTCTTTATAATAACAAGAGGACAGTTTTCGTGGGTAATTTGCCATTTGATGTCAAGGATGAGGAACTTTATCAGTTGTTTTGCGGCATCAAACAGCTGGAATCTGGCGTTGAGGCTGTTCGAGTTATTAGGGACCGTCACACAAGTCTTGGGAAAGGGATAGCGTACGTCATGTTCAAAACAAGGGAAGATGCAAACATTGTTTGTAAAAAAACCTTGAGACTCCGAGACCGCGAACTGAGAATTAGTCATGTCAAGTCAATTACTCAATCCACCACACCTACCAAGAGGAAAAATCCATTTTCAGGTGACTCAGAAAATTCCCCTGCTAAGAAATTTTCATCGGATTCGAAGACTCGTACCCCTGCAAAGAAAGGCGCAAAGACTCCTCCACAGAGTCGGTACAGGGTAACCGCCAGTGGGGACACCTCGTACCAAGGTTTACGTGCGAGTAAATCCGGTGAAAGTAAGAAACAAACCCCTGTAAGAAGATTTACTGCTACAACACCAGCTTCTGTAAATTCTGGAAAGAATAGTGGAGTCAAAATTAAACAGAGAGTTGATAAAAGACCATCAGTAGCAGCAAGAAAGGCTAAAGCAATTGCTATGCAGAATGGTGGTGCTTCTTATAAACCAGGGAATAACAAAAGAAAGATGGATGCTAGAACTCCCACAAGTTCTAACAAGAGAAAGAAGGTTATGAAGTCTAAGTAA MAKKSKEQPKKPPTPKSKKVPATSVNILNQLFGETPDAEPSNSLFSSDNPFRRKPTDSSQTPQIPENPKNDEVANPDVATKKRNKDDISPEEVKKLRKEKLEKNPNLEAVVNGSELNVNLEEKKEKKKRKRDELERDYEVKKYGAAPDEEEEKKEKVGVGKKRKAVDNPADLMVSQEGYDDESKLLRTVFVGNLPLKVKKKALLKEFSVFGEIDSVRIRSVPTVDSKKPKKALVINGKLNESADSVNAYVVFKTEQAAEASLTLNMSMIGGNHIRVDRACPPRKKLKGDDSSATLYNNKRTVFVGNLPFDVKDEELYQLFCGIKQLESGVEAVRVIRDRHTSLGKGIAYVMFKTREDANIVCKKTLRLRDRELRISHVKSITQSTTPTKRKNPFSGDSENSPAKKFSSDSKTRTPAKKGAKTPPQSRYRVTASGDTSYQGLRASKSGESKKQTPVRRFTATTPASVNSGKNSGVKIKQRVDKRPSVAARKAKAIAMQNGGASYKPGNNKRKMDARTPTSSNKRKKVMKSK Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23380.1 vs. NCBI nr
Match: gi|902198570|gb|KNA13711.1| (hypothetical protein SOVF_113820 [Spinacia oleracea]) HSP 1 Score: 989.2 bits (2556), Expect = 2.800e-285 Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 1
BLAST of Spo23380.1 vs. NCBI nr
Match: gi|731367332|ref|XP_010695552.1| (PREDICTED: RNA-binding protein 34 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 681.4 bits (1757), Expect = 1.300e-192 Identity = 395/538 (73.42%), Postives = 439/538 (81.60%), Query Frame = 1
BLAST of Spo23380.1 vs. NCBI nr
Match: gi|1009157632|ref|XP_015896863.1| (PREDICTED: RNA-binding protein 34 [Ziziphus jujuba]) HSP 1 Score: 434.9 bits (1117), Expect = 2.000e-118 Identity = 288/548 (52.55%), Postives = 373/548 (68.07%), Query Frame = 1
BLAST of Spo23380.1 vs. NCBI nr
Match: gi|703100622|ref|XP_010096968.1| (RNA-binding protein 34 [Morus notabilis]) HSP 1 Score: 432.2 bits (1110), Expect = 1.300e-117 Identity = 283/539 (52.50%), Postives = 363/539 (67.35%), Query Frame = 1
BLAST of Spo23380.1 vs. NCBI nr
Match: gi|694391356|ref|XP_009371202.1| (PREDICTED: RNA-binding protein 34-like [Pyrus x bretschneideri]) HSP 1 Score: 432.2 bits (1110), Expect = 1.300e-117 Identity = 278/559 (49.73%), Postives = 363/559 (64.94%), Query Frame = 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2H2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113820 PE=4 SV=1) HSP 1 Score: 989.2 bits (2556), Expect = 2.000e-285 Identity = 530/530 (100.00%), Postives = 530/530 (100.00%), Query Frame = 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC19_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125540 PE=4 SV=1) HSP 1 Score: 681.4 bits (1757), Expect = 8.800e-193 Identity = 395/538 (73.42%), Postives = 439/538 (81.60%), Query Frame = 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Match: W9RDV6_9ROSA (RNA-binding protein 34 OS=Morus notabilis GN=L484_017785 PE=4 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 9.300e-118 Identity = 283/539 (52.50%), Postives = 363/539 (67.35%), Query Frame = 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Match: B9MU42_POPTR (RNA recognition motif-containing family protein OS=Populus trichocarpa GN=POPTR_0001s02270g PE=4 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 3.000e-116 Identity = 279/527 (52.94%), Postives = 352/527 (66.79%), Query Frame = 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Match: A0A067KJT8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09337 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 5.100e-116 Identity = 281/548 (51.28%), Postives = 362/548 (66.06%), Query Frame = 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Match: NOP12_SCHPO (Nucleolar protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nop12 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.900e-24 Identity = 103/333 (30.93%), Postives = 160/333 (48.05%), Query Frame = 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Match: NOP12_DEBHA (Nucleolar protein 12 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NOP12 PE=3 SV=2) HSP 1 Score: 114.0 bits (284), Expect = 5.000e-24 Identity = 120/376 (31.91%), Postives = 180/376 (47.87%), Query Frame = 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Match: RBM34_HUMAN (RNA-binding protein 34 OS=Homo sapiens GN=RBM34 PE=1 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 7.200e-23 Identity = 127/416 (30.53%), Postives = 188/416 (45.19%), Query Frame = 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Match: NOP12_CANAL (Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOP12 PE=3 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.800e-22 Identity = 126/459 (27.45%), Postives = 206/459 (44.88%), Query Frame = 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Match: RBM34_RAT (RNA-binding protein 34 OS=Rattus norvegicus GN=Rbm34 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.700e-20 Identity = 111/354 (31.36%), Postives = 162/354 (45.76%), Query Frame = 1
BLAST of Spo23380.1 vs. TAIR (Arabidopsis)
Match: AT5G46840.1 (RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 384.4 bits (986), Expect = 1.100e-106 Identity = 268/536 (50.00%), Postives = 341/536 (63.62%), Query Frame = 1
BLAST of Spo23380.1 vs. TAIR (Arabidopsis)
Match: AT3G10400.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein) HSP 1 Score: 50.1 bits (118), Expect = 5.000e-6 Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23380.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23380.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23380.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23380.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|