Spo23478 (gene) | SpinachBase

Overview


Name	Spo23478
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	YABBY protein
Location	SpoScf_03176 : 28994 .. 31903 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACAATCATACATACATACACTCTCAATTCTCAATTCTCAATTCTCAATTCTCTGTCTTTTTCTCCCTCTCAACCCTCATTTGTTAACACCAGATCCCCAAAAGGGAACTATCTAGCTAGGGAATGCTGTTAATCTATCTACACTCACTCACTCACTTATAAAAATTAAAACTTTATAATAAAAATAAAAAGTATAGTATATAAAAAATAATAAAAATAGTGTATAAGATAACAGTATTGGACTGGCATGGGCTACTACAAATAAAACATCACCGATCCATCAGTCAGTAAATCAATCTCCATCCATCCATTCATATATCCCATCAAAGAGATCATATCATCTTCTTCACTAACAAATATTCACATACTTACAAACTTTAGAGAGAGAAATTAAACACAAACAACTCAATGTCGTCGTCTTCGTCGTCAACAACCGGTAGTGGTGGTGGTGGTAGCGGGTTTGATACTACTCCACAGACTCCAACTGAACATGTTGTTTCTGATCAGCTTTGTTATGTCCATTGTGAATTCTGTGATACTGTCCTTGCTGTAAGTTCATTTTCAATTTATAACAACTGTCTTTTTATTTCTATACATTCACCTTTTATTTTTTTTGCAATTTGTTGTTTATTTTTGGTATGAATGAAAAATGTGCAGGTGAGTGTGCCGAGTAGCAGCTTGTTTAAGACTGTGACGGTGAGGTGTGGGCACTGCACTAATCTCTTGTCAGTCAATATGATGGTTCATCTCTTGCAGGCGGCCGCCCCTTCGCCGCCTCTGCTTCCTCCTCCTCCACCTCTTCCTCATCATCTTTCACATCCCTCTTTCTTCAACCCCCCTCACAATAATCTTTTGGTATGCTTCTTTTCCTTTTCCTTTTTCTTTTTAGTACTAAATTTGGCTTATTTTGATTTACTAGGGTTCATTTTGTTTCTTTGATTGAAATGTAGGCTTTGGAATTGATAGATTATAAAACTAATATTGGGGCATCAACCATCAGCTTAAGCATTTGGTTGATTTGGTCCTTTGACATGGTGATAACTAAATTAGACGAAGAAGCTAATTAAGTATATATAATTGTATGATTTTACCTATGACTTACTTCTGAATTGGTAGTCACGTTGATAATGTAATATGAACTAATAACGTGGAGACTCCCTCATTAGATACTTGTTGCGAAAAATTCTAACTAGTAGGAGTAAAATTGTTTGTATGTTGATGTAATATTTATGCGTAATAGGAGGAGATTCGGAGCTCAACACCAAATATACTGATGAACAATCATCATCAGCCTATGTTCAATGACCAGATGATGTCCATTCGAGGAGGCGATCATCTTCACCACCACCATCAAGAGATCCCTAAACCACCTCCTCCAGTCAATCGGCGTAAGTCCCTCCATTTCCTTCTTAATCACTTCTTTTCCACGCTCGTCTATCCAGGCCTTATGGTTAGGGTTATAGGAGGAGAATAGTATGAACTAGTATTAATTCGACTTCACCATAATATATAAATAGAAAAATGTTTACAATTAGGAAATTAAATAGCCAATCTATCCTATTTTTCCCGTTTTATTTGAAAATTATTTAACTTTTAGGGCCACAAAATACAAGTTTAGAGTATTTGGTTTTTTCCAATAATTAGTTAAAATAAGACAACATTTAAATCTACAGTTATGCTTAGCCCTAAATAGACATGTCAATTTAAGAAAGAAATTTGATTGAGTGGTTTTAGATTCACACCACCCCCTAACAGATTTTGGTCCAGTTTACTTACAAAGTTTTCTAAAAATAAACCAAAAAGATAAAGTTATCTTTCTTTTTCTCTTCATTCATCACTTTCAATTCACTGTTTGTACGGAGTACTTGAACTTCTTTCATTTGGAATTTGGTACCAAACACGTTTTCCCTAAACTTCTTGAATCGAAATTCTCCTAACAATTTGTATGAGTACCTTTAAATCATGTACTTTCGATCAATTATCAAATCGAAATTCTCCTCATTAACAATTTGTACGAGTACTTTTAAATTATGTACTTTCCATTATAAAATAATCGGAACTAGGGCAATGTATGAAGTTTTTATTATTAACTCCTACTCCGCAGTAAATAAGCTCATTATTGTTAAGATCGGAAGCTGAAAATAGTTAATTAGGTTACAATCCAATCATGATTTCCTCCTAAGAAAATCTTACCAGCCTAAAACTAGTTACTTGTCATCATTAGAAGTGAAAATCATAATCTATAGAATTAAACGTTGATTTACTTATAATGCTGATGTACGCAAATTTGATTGATTTAGGAGTACAGTGAGTAAAAAAGGACGAAAAAATAATAATAACAAAGACATGATTTCAAAGTTAGTTAGATAGGTAGCCAAGTGTATGTCCCCCACACAACCCACAGAAGGGACATATAAAATCCAAGAAGAAGCATTTGATCTGATGGGATAGATTGATTGATAATGGTAACAGAATGGTATGATGAGGTTATGATTTAGAGTGAGAAGATCGATTCTATTGATTATTGGAATTTATGAATTGAATGCAAGAAACGAAAATGAAAAAAATGTCAGAAAAAAGTGAGTTTAATAATTAATGTGGTTTTTGTTGTTTGTCTTGTTTGTTTATATGTTGTTTTTTGCATGTTTATATGAATAAATGTCTATCACAGCTCCAGAGAAGAGACAGAGAGTACCATCTGCCTATAACAGATTCATCAAGTTAGTACTCTTCTTTTTTTTCTTCAATAAATCCGTTTGAATTAATAACGTGACAACTAAATCAGGGCAGAACCGCAATTGCTAATGGAAAAGAAATGTAATTGTTTTGTAGGGACGAAATTCAACGAATCAAAGCTGGAAATCCTGATATTAGCCATAGGGAGGCCTTCAGTGCTGCTGCTAAGAAT

mRNA sequence

CATACAATCATACATACATACACTCTCAATTCTCAATTCTCAATTCTCAATTCTCTGTCTTTTTCTCCCTCTCAACCCTCATTTGTTAACACCAGATCCCCAAAAGGGAACTATCTAGCTAGGGAATGCTGTTAATCTATCTACACTCACTCACTCACTTATAAAAATTAAAACTTTATAATAAAAATAAAAAGTATAGTATATAAAAAATAATAAAAATAGTGTATAAGATAACAGTATTGGACTGGCATGGGCTACTACAAATAAAACATCACCGATCCATCAGTCAGTAAATCAATCTCCATCCATCCATTCATATATCCCATCAAAGAGATCATATCATCTTCTTCACTAACAAATATTCACATACTTACAAACTTTAGAGAGAGAAATTAAACACAAACAACTCAATGTCGTCGTCTTCGTCGTCAACAACCGGTAGTGGTGGTGGTGGTAGCGGGTTTGATACTACTCCACAGACTCCAACTGAACATGTTGTTTCTGATCAGCTTTGTTATGTCCATTGTGAATTCTGTGATACTGTCCTTGCTGTGAGTGTGCCGAGTAGCAGCTTGTTTAAGACTGTGACGGTGAGGTGTGGGCACTGCACTAATCTCTTGTCAGTCAATATGATGGTTCATCTCTTGCAGGCGGCCGCCCCTTCGCCGCCTCTGCTTCCTCCTCCTCCACCTCTTCCTCATCATCTTTCACATCCCTCTTTCTTCAACCCCCCTCACAATAATCTTTTGGAGGAGATTCGGAGCTCAACACCAAATATACTGATGAACAATCATCATCAGCCTATGTTCAATGACCAGATGATGTCCATTCGAGGAGGCGATCATCTTCACCACCACCATCAAGAGATCCCTAAACCACCTCCTCCAGTCAATCGGCCTCCAGAGAAGAGACAGAGAGTACCATCTGCCTATAACAGATTCATCAAGGACGAAATTCAACGAATCAAAGCTGGAAATCCTGATATTAGCCATAGGGAGGCCTTCAGTGCTGCTGCTAAGAAT

Coding sequence (CDS)

ATGTCGTCGTCTTCGTCGTCAACAACCGGTAGTGGTGGTGGTGGTAGCGGGTTTGATACTACTCCACAGACTCCAACTGAACATGTTGTTTCTGATCAGCTTTGTTATGTCCATTGTGAATTCTGTGATACTGTCCTTGCTGTGAGTGTGCCGAGTAGCAGCTTGTTTAAGACTGTGACGGTGAGGTGTGGGCACTGCACTAATCTCTTGTCAGTCAATATGATGGTTCATCTCTTGCAGGCGGCCGCCCCTTCGCCGCCTCTGCTTCCTCCTCCTCCACCTCTTCCTCATCATCTTTCACATCCCTCTTTCTTCAACCCCCCTCACAATAATCTTTTGGAGGAGATTCGGAGCTCAACACCAAATATACTGATGAACAATCATCATCAGCCTATGTTCAATGACCAGATGATGTCCATTCGAGGAGGCGATCATCTTCACCACCACCATCAAGAGATCCCTAAACCACCTCCTCCAGTCAATCGGCCTCCAGAGAAGAGACAGAGAGTACCATCTGCCTATAACAGATTCATCAAGGACGAAATTCAACGAATCAAAGCTGGAAATCCTGATATTAGCCATAGGGAGGCCTTCAGTGCTGCTGCTAAGAAT

Protein sequence

MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23478.1	Spo23478.1	mRNA

Homology

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BLAST of Spo23478.1 vs. NCBI nr
Match: gi|902175576|gb|KNA08622.1| (hypothetical protein SOVF_160970 [Spinacia oleracea])

HSP 1 Score: 409.8 bits (1052), Expect = 2.700e-111
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT 60
           MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT
Sbjct: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT 60

Query: 61  VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST 120
           VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST
Sbjct: 61  VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST 120

Query: 121 PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD 180
           PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD
Sbjct: 121 PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD 180

Query: 181 EIQRIKAGNPDISHREAFSAAAKN 205
           EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 EIQRIKAGNPDISHREAFSAAAKN 204

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BLAST of Spo23478.1 vs. NCBI nr
Match: gi|731361126|ref|XP_010692186.1| (PREDICTED: axial regulator YABBY 1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 260.4 bits (664), Expect = 2.700e-66
Identity = 151/209 (72.25%), Postives = 162/209 (77.51%), Query Frame = 1


		  
Query: 2   SSSSSSTTGSGGGGSGFDTTPQTPTEHVV------SDQLCYVHCEFCDTVLAVSVPSSSL 61
           SSSS++TTGS GGG   DTT  +   +V       SDQLCYVHC FCDTVLAVSVPSSSL
Sbjct: 4   SSSSTTTTGSAGGGGSLDTTNHSHNTNVENHLLSPSDQLCYVHCNFCDTVLAVSVPSSSL 63

Query: 62  FKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEE 121
           FKTVTVRCGHCTNLLSV M       + P PPL  P   L HHL  PSFF  PHN LLEE
Sbjct: 64  FKTVTVRCGHCTNLLSVQMWT----PSTPPPPL--PTNQLHHHLPPPSFFTSPHN-LLEE 123

Query: 122 IRSSTPNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYN 181
           IRSSTPN + NNHHQ +FN+ MM +RG DH  HHHQE+PKP PPVNRPPEKRQRVPSAYN
Sbjct: 124 IRSSTPNFI-NNHHQSVFNEPMMPVRGIDH--HHHQELPKP-PPVNRPPEKRQRVPSAYN 183

Query: 182 RFIKDEIQRIKAGNPDISHREAFSAAAKN 205
           RFIK+EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 184 RFIKEEIQRIKAGNPDISHREAFSAAAKN 201

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BLAST of Spo23478.1 vs. NCBI nr
Match: gi|731361128|ref|XP_010692187.1| (PREDICTED: axial regulator YABBY 1 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 254.6 bits (649), Expect = 1.500e-64
Identity = 149/209 (71.29%), Postives = 160/209 (76.56%), Query Frame = 1


		  
Query: 2   SSSSSSTTGSGGGGSGFDTTPQTPTEHVV------SDQLCYVHCEFCDTVLAVSVPSSSL 61
           SSSS++TTGS GGG   DTT  +   +V       SDQLCYVHC FCDTVLAVSVPSSSL
Sbjct: 4   SSSSTTTTGSAGGGGSLDTTNHSHNTNVENHLLSPSDQLCYVHCNFCDTVLAVSVPSSSL 63

Query: 62  FKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEE 121
           FKTVTVRCGHCTNLLSV M       + P PPL  P   L HHL  PSFF  PHN L  E
Sbjct: 64  FKTVTVRCGHCTNLLSVQMWT----PSTPPPPL--PTNQLHHHLPPPSFFTSPHNLL--E 123

Query: 122 IRSSTPNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYN 181
           IRSSTPN + NNHHQ +FN+ MM +RG DH  HHHQE+PKP PPVNRPPEKRQRVPSAYN
Sbjct: 124 IRSSTPNFI-NNHHQSVFNEPMMPVRGIDH--HHHQELPKP-PPVNRPPEKRQRVPSAYN 183

Query: 182 RFIKDEIQRIKAGNPDISHREAFSAAAKN 205
           RFIK+EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 184 RFIKEEIQRIKAGNPDISHREAFSAAAKN 200

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BLAST of Spo23478.1 vs. NCBI nr
Match: gi|645253481|ref|XP_008232594.1| (PREDICTED: axial regulator YABBY 1 isoform X1 [Prunus mume])

HSP 1 Score: 213.0 bits (541), Expect = 4.900e-52
Identity = 132/208 (63.46%), Postives = 149/208 (71.63%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVS--DQLCYVHCEFCDTVLAVSVPSSSLFKT 60
           MSS+++S+T             Q   +H++S  DQLCYVHC FCDTVLAVSVP SSLFKT
Sbjct: 1   MSSAAASSTAFNSPDQ------QQQQQHLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKT 60

Query: 61  VTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRS 120
           VTVRCGHC+NLLSVNM   LL            PPP   HL HP FFN PHN L E++R+
Sbjct: 61  VTVRCGHCSNLLSVNMRALLL------------PPPNNQHLPHP-FFNTPHNLLQEDMRN 120

Query: 121 S-TPNILMNNHHQPMF-NDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNR 180
           + + N LMN  HQP + N+ +M+IRGG      HQEIPKPP  VNRPPEKRQRVPSAYNR
Sbjct: 121 APSSNTLMN--HQPNYTNESIMAIRGGGL---DHQEIPKPPAAVNRPPEKRQRVPSAYNR 180

Query: 181 FIKDEIQRIKAGNPDISHREAFSAAAKN 205
           FIKDEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 FIKDEIQRIKAGNPDISHREAFSAAAKN 184

[Close]

BLAST of Spo23478.1 vs. NCBI nr
Match: gi|645253483|ref|XP_008232595.1| (PREDICTED: axial regulator YABBY 1 isoform X2 [Prunus mume])

HSP 1 Score: 211.8 bits (538), Expect = 1.100e-51
Identity = 133/208 (63.94%), Postives = 150/208 (72.12%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVS--DQLCYVHCEFCDTVLAVSVPSSSLFKT 60
           MSS+++S+T             Q   +H++S  DQLCYVHC FCDTVLAVSVP SSLFKT
Sbjct: 1   MSSAAASSTAFNSPDQ------QQQQQHLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKT 60

Query: 61  VTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRS 120
           VTVRCGHC+NLLSVNM   LL            PPP   HL HP FFN PHN LLE++R+
Sbjct: 61  VTVRCGHCSNLLSVNMRALLL------------PPPNNQHLPHP-FFNTPHN-LLEDMRN 120

Query: 121 S-TPNILMNNHHQPMF-NDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNR 180
           + + N LMN  HQP + N+ +M+IRGG      HQEIPKPP  VNRPPEKRQRVPSAYNR
Sbjct: 121 APSSNTLMN--HQPNYTNESIMAIRGGGL---DHQEIPKPPAAVNRPPEKRQRVPSAYNR 180

Query: 181 FIKDEIQRIKAGNPDISHREAFSAAAKN 205
           FIKDEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 FIKDEIQRIKAGNPDISHREAFSAAAKN 183

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BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QN09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_160970 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.900e-111
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT 60
           MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT
Sbjct: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVT 60

Query: 61  VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST 120
           VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST
Sbjct: 61  VRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSST 120

Query: 121 PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD 180
           PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD
Sbjct: 121 PNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKD 180

Query: 181 EIQRIKAGNPDISHREAFSAAAKN 205
           EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 EIQRIKAGNPDISHREAFSAAAKN 204

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BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGE9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018710 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.900e-66
Identity = 151/209 (72.25%), Postives = 162/209 (77.51%), Query Frame = 1


		  
Query: 2   SSSSSSTTGSGGGGSGFDTTPQTPTEHVV------SDQLCYVHCEFCDTVLAVSVPSSSL 61
           SSSS++TTGS GGG   DTT  +   +V       SDQLCYVHC FCDTVLAVSVPSSSL
Sbjct: 4   SSSSTTTTGSAGGGGSLDTTNHSHNTNVENHLLSPSDQLCYVHCNFCDTVLAVSVPSSSL 63

Query: 62  FKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEE 121
           FKTVTVRCGHCTNLLSV M       + P PPL  P   L HHL  PSFF  PHN LLEE
Sbjct: 64  FKTVTVRCGHCTNLLSVQMWT----PSTPPPPL--PTNQLHHHLPPPSFFTSPHN-LLEE 123

Query: 122 IRSSTPNILMNNHHQPMFNDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYN 181
           IRSSTPN + NNHHQ +FN+ MM +RG DH  HHHQE+PKP PPVNRPPEKRQRVPSAYN
Sbjct: 124 IRSSTPNFI-NNHHQSVFNEPMMPVRGIDH--HHHQELPKP-PPVNRPPEKRQRVPSAYN 183

Query: 182 RFIKDEIQRIKAGNPDISHREAFSAAAKN 205
           RFIK+EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 184 RFIKEEIQRIKAGNPDISHREAFSAAAKN 201

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BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Match: D9ZJG4_MALDO (YABBY domain class transcription factor OS=Malus domestica GN=YABBY1 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.200e-51
Identity = 129/207 (62.32%), Postives = 148/207 (71.50%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVS--DQLCYVHCEFCDTVLAVSVPSSSLFKT 60
           MSS+++S+T        F++  Q    H++S  DQLCYVHC FCDTVLAVSVP SSLFKT
Sbjct: 1   MSSAAASSTV-------FNSQDQQHHHHLLSPTDQLCYVHCNFCDTVLAVSVPCSSLFKT 60

Query: 61  VTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRS 120
           VTVRCGHC+NL+SVNM   LL  A  +  L         HL HP FF+ PHN L EEIR+
Sbjct: 61  VTVRCGHCSNLISVNMCALLLPPANNNNQL---------HLPHP-FFSTPHNLLQEEIRN 120

Query: 121 STPNILMNNHHQPMF-NDQMMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRF 180
           +  N +MN  HQP + N+ +M IRG      H QEIPKPP  VNRPPEKRQRVPSAYNRF
Sbjct: 121 TPSNTMMN--HQPCYTNESIMPIRGEGF--EHLQEIPKPPAVVNRPPEKRQRVPSAYNRF 180

Query: 181 IKDEIQRIKAGNPDISHREAFSAAAKN 205
           IK+EIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 IKEEIQRIKAGNPDISHREAFSAAAKN 186

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BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Match: A0A061DU75_THECC (Plant-specific transcription factor YABBY family protein isoform 1 OS=Theobroma cacao GN=TCM_005549 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.300e-50
Identity = 123/175 (70.29%), Postives = 131/175 (74.86%), Query Frame = 1


		  
Query: 31  SDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLP 90
           SDQLCYVHC FCDTVLAVSVP +SLFKTVTVRCGHCTNLLSVNM   LL AA        
Sbjct: 16  SDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGLLLPAANQL----- 75

Query: 91  PPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMM-SIRGGDHLHHH 150
                  HL H SFF P   NLLEEIRS+ PN+L+N   QP  +D +M +IRGG      
Sbjct: 76  -------HLGH-SFFTP--QNLLEEIRSAPPNMLIN---QPNPSDTVMPAIRGGV----- 135

Query: 151 HQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
            +EIPKPP  VNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 136 -EEIPKPPV-VNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 165

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BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Match: Q6SS00_ANTMA (YABBY-like transcription factor GRAMINIFOLIA OS=Antirrhinum majus GN=GRAM PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.600e-49
Identity = 122/182 (67.03%), Postives = 130/182 (71.43%), Query Frame = 1


		  
Query: 25  PTEHVV--SDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAA 84
           P  H +  S+QLCYVHC FCDTVLAVSVP +SL KTVTVRCGHCTNLLSVNM   LL AA
Sbjct: 9   PDHHHITPSEQLCYVHCNFCDTVLAVSVPCTSLIKTVTVRCGHCTNLLSVNMRGLLLPAA 68

Query: 85  APSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMMSIRG 144
                          HL H SFF+P   NLLEEIR+S  N+LMN   QP  ND MM +RG
Sbjct: 69  NQL------------HLGH-SFFSP--QNLLEEIRNSPSNLLMN---QPNPNDSMMPVRG 128

Query: 145 GDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAA 204
            D       E+PKPP   NRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAA
Sbjct: 129 LD-------ELPKPPV-ANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAA 164

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BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Match: YAB3_ARATH (Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.600e-48
Identity = 118/195 (60.51%), Postives = 133/195 (68.21%), Query Frame = 1


		  
Query: 20  TTPQTPTEHVVS-DQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHL 79
           + P  P +H  S DQLCYVHC FCDTVLAVSVP SSLFKTVTVRCGHC+NLLSV + +  
Sbjct: 10  SAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRA 69

Query: 80  LQAAAPSP---PLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMN---NHHQPM 139
           L   + S      LPPPPP            PP  NLLEE+RS   NI MN   +HH   
Sbjct: 70  LLLPSVSNLGHSFLPPPPP------------PPPPNLLEEMRSGGQNINMNMMMSHHASA 129

Query: 140 FNDQ---MMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN 199
            +     +M+ R G  + H  QE+P+PPP  NRPPEKRQRVPSAYNRFIK+EIQRIKAGN
Sbjct: 130 HHPNEHLVMATRNGRSVDHL-QEMPRPPP-ANRPPEKRQRVPSAYNRFIKEEIQRIKAGN 189

Query: 200 PDISHREAFSAAAKN 205
           PDISHREAFSAAAKN
Sbjct: 190 PDISHREAFSAAAKN 190

[Close]

BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Match: YAB1_ARATH (Axial regulator YABBY 1 OS=Arabidopsis thaliana GN=YAB1 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.500e-42
Identity = 110/183 (60.11%), Postives = 123/183 (67.21%), Query Frame = 1


		  
Query: 24  TPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAA 83
           +P     SD LCYV C FC T+LAV+VP +SLFKTVTVRCG CTNLLSVNM  ++L    
Sbjct: 15  SPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVL---- 74

Query: 84  PSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRS--STPNILMNNHHQPMFNDQMMSIR 143
                 P    L   L   S+FNP   ++LEE+R   S  N++M N H P  ND    I 
Sbjct: 75  ------PASNQLQLQLGPHSYFNP--QDILEELRDAPSNMNMMMMNQH-PTMND----IP 134

Query: 144 GGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAA 203
               LH  H EIPK  PPVNRPPEKRQRVPSAYNRFIK+EIQRIKAGNPDISHREAFSAA
Sbjct: 135 SFMDLHQQH-EIPKA-PPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAA 178

Query: 204 AKN 205
           AKN
Sbjct: 195 AKN 178

[Close]

BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.600e-42
Identity = 110/203 (54.19%), Postives = 126/203 (62.07%), Query Frame = 1


		  
Query: 32  DQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLL---QAAAPSPPL 91
           +QLCYVHC +CDTVL VSVPSSSLF+TVTVRCGHC++LL+VNM   LL    AAAP PP 
Sbjct: 58  EQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPP 117

Query: 92  LPPPPP------LPHHLSHPSFFNPPHNNLLEEI--RSSTPNILMNNHHQPMFNDQMMSI 151
            PPPPP       PH L+      P H++LL+EI   +S   +L+  H          S 
Sbjct: 118 PPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASC 177

Query: 152 RGGDHLHHHHQEIPKPPPP-------------------VNRPPEKRQRVPSAYNRFIKDE 205
           R     ++       PPPP                   +NRPPEKRQRVPSAYNRFIKDE
Sbjct: 178 RN----NNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDE 237

[Close]

BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.100e-38
Identity = 114/229 (49.78%), Postives = 131/229 (57.21%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVS----DQLCYVHCEFCDTVLAVSVPSSSLF 60
           MSSSSSS+                P +H+ +    +QLCYVHC  CDT+LAV VP SSLF
Sbjct: 1   MSSSSSSSA-------------VFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLF 60

Query: 61  KTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSH--PSFFNP--PHNNL 120
           KTVTVRCGHC NLLSVN+             LLP P P P +  H  PS  +P  PH  L
Sbjct: 61  KTVTVRCGHCANLLSVNL----------RGLLLPAPAPAPANQLHFGPSLLSPTSPH-GL 120

Query: 121 LEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHLH----------------HHHQEIPK- 180
           L+E+   TP++LM    +   +  + SI G                         E+PK 
Sbjct: 121 LDEVAFQTPSLLM----EQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKN 180

Query: 181 PPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
            P   NRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 APASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 201

[Close]

BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.100e-38
Identity = 114/229 (49.78%), Postives = 131/229 (57.21%), Query Frame = 1


		  
Query: 1   MSSSSSSTTGSGGGGSGFDTTPQTPTEHVVS----DQLCYVHCEFCDTVLAVSVPSSSLF 60
           MSSSSSS+                P +H+ +    +QLCYVHC  CDT+LAV VP SSLF
Sbjct: 1   MSSSSSSSA-------------VFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLF 60

Query: 61  KTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLPPPPPLPHHLSH--PSFFNP--PHNNL 120
           KTVTVRCGHC NLLSVN+             LLP P P P +  H  PS  +P  PH  L
Sbjct: 61  KTVTVRCGHCANLLSVNL----------RGLLLPAPAPAPANQLHFGPSLLSPTSPH-GL 120

Query: 121 LEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHLH----------------HHHQEIPK- 180
           L+E+   TP++LM    +   +  + SI G                         E+PK 
Sbjct: 121 LDEVAFQTPSLLM----EQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKN 180

Query: 181 PPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
            P   NRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN
Sbjct: 181 APASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 201

[Close]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 192.2 bits (487), Expect = 3.100e-49
Identity = 118/195 (60.51%), Postives = 133/195 (68.21%), Query Frame = 1


		  
Query: 20  TTPQTPTEHVVS-DQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHL 79
           + P  P +H  S DQLCYVHC FCDTVLAVSVP SSLFKTVTVRCGHC+NLLSV + +  
Sbjct: 10  SAPAFPPDHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRA 69

Query: 80  LQAAAPSP---PLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMN---NHHQPM 139
           L   + S      LPPPPP            PP  NLLEE+RS   NI MN   +HH   
Sbjct: 70  LLLPSVSNLGHSFLPPPPP------------PPPPNLLEEMRSGGQNINMNMMMSHHASA 129

Query: 140 FNDQ---MMSIRGGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGN 199
            +     +M+ R G  + H  QE+P+PPP  NRPPEKRQRVPSAYNRFIK+EIQRIKAGN
Sbjct: 130 HHPNEHLVMATRNGRSVDHL-QEMPRPPP-ANRPPEKRQRVPSAYNRFIKEEIQRIKAGN 189

Query: 200 PDISHREAFSAAAKN 205
           PDISHREAFSAAAKN
Sbjct: 190 PDISHREAFSAAAKN 190

[Close]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 172.9 bits (437), Expect = 2.000e-43
Identity = 110/183 (60.11%), Postives = 123/183 (67.21%), Query Frame = 1


		  
Query: 24  TPTEHVVSDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAA 83
           +P     SD LCYV C FC T+LAV+VP +SLFKTVTVRCG CTNLLSVNM  ++L    
Sbjct: 15  SPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVL---- 74

Query: 84  PSPPLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRS--STPNILMNNHHQPMFNDQMMSIR 143
                 P    L   L   S+FNP   ++LEE+R   S  N++M N H P  ND    I 
Sbjct: 75  ------PASNQLQLQLGPHSYFNP--QDILEELRDAPSNMNMMMMNQH-PTMND----IP 134

Query: 144 GGDHLHHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAA 203
               LH  H EIPK  PPVNRPPEKRQRVPSAYNRFIK+EIQRIKAGNPDISHREAFSAA
Sbjct: 135 SFMDLHQQH-EIPKA-PPVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAA 178

Query: 204 AKN 205
           AKN
Sbjct: 195 AKN 178

[Close]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.400e-33
Identity = 89/175 (50.86%), Postives = 109/175 (62.29%), Query Frame = 1


		  
Query: 31  SDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLP 90
           S+++CYVHC FC T+LAVSVP +SLF  VTVRCGHCTNLLS+N+ V L Q +AP      
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAP------ 66

Query: 91  PPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHLHHH- 150
                           P H +L +  R  T +++          D   S R  ++L  + 
Sbjct: 67  ----------------PIHQDL-QPHRQHTTSLVTRK-------DCASSSRSTNNLSENI 126

Query: 151 HQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
            +E P+ PP   RPPEKRQRVPSAYNRFIK+EIQRIKA NP+ISHREAFS AAKN
Sbjct: 127 DREAPRMPPI--RPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKN 149

[Close]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 109.4 bits (272), Expect = 2.700e-24
Identity = 72/178 (40.45%), Postives = 97/178 (54.49%), Query Frame = 1


		  
Query: 33  QLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMM------VHLLQAAAPSP 92
           Q+C+V C FC T+L VSVP +SL   VTVRCGHCT+LLSVN+M      +HLL + +   
Sbjct: 20  QICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLS--- 79

Query: 93  PLLPPPPPLPHHLSHPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHL 152
                      HL           + +EE             +Q   N     +   D+ 
Sbjct: 80  -----------HLDETGKEEVAATDGVEEEAWKV--------NQEKENSPTTLVSSSDN- 139

Query: 153 HHHHQEIPKPPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
               +++ +    VN+PPEKRQR PSAYN FIK+EI+R+KA NP ++H+EAFS AAKN
Sbjct: 140 --EDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKN 172

[Close]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Match: AT1G69180.1 (Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 98.2 bits (243), Expect = 6.200e-21
Identity = 71/179 (39.66%), Postives = 90/179 (50.28%), Query Frame = 1


		  
Query: 31  SDQLCYVHCEFCDTVLAVSVPSSSLFKTVTVRCGHCTNLLSVNMMVHLLQAAAPSPPLLP 90
           ++ L YV C  C+T+LAV +P   +  TVTV+CGHC NL                   L 
Sbjct: 18  AEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNL-----------------SFLT 77

Query: 91  PPPPLPHHLS----HPSFFNPPHNNLLEEIRSSTPNILMNNHHQPMFNDQMMSIRGGDHL 150
             PPL  H+S      SF    +        SS+ +    +  QP               
Sbjct: 78  TTPPLQGHVSLTLQMQSFGGSDYKK-----GSSSSSSSSTSSDQP--------------- 137

Query: 151 HHHHQEIPKPPPP-VNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKN 205
                  P P PP V +PPEK+QR+PSAYNRF++DEIQRIK+ NP+I HREAFSAAAKN
Sbjct: 138 -------PSPSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKN 152

The following BLAST results are available for this feature:

BLAST of Spo23478.1 vs. NCBI nr
BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
BLAST of Spo23478.1 vs. TAIR (Arabidopsis)

BLAST of Spo23478.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902175576\|gb\|KNA08622.1\|	2.7e-111	100.	hypothetical protein SOVF_1609...	[more]
gi\|731361126\|ref\|XP_010692186.1\|	2.7e-66	72.2	PREDICTED: axial regulator YAB...	[more]
gi\|731361128\|ref\|XP_010692187.1\|	1.5e-64	71.2	PREDICTED: axial regulator YAB...	[more]
gi\|645253481\|ref\|XP_008232594.1\|	4.9e-52	63.4	PREDICTED: axial regulator YAB...	[more]
gi\|645253483\|ref\|XP_008232595.1\|	1.1e-51	63.9	PREDICTED: axial regulator YAB...	[more]

BLAST of Spo23478.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QN09_SPIOL	1.9e-111	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGE9_BETVU	1.9e-66	72.2	Uncharacterized protein OS=Bet...	[more]
D9ZJG4_MALDO	2.2e-51	62.3	YABBY domain class transcripti...	[more]
A0A061DU75_THECC	9.3e-50	70.2	Plant-specific transcription f...	[more]
Q6SS00_ANTMA	1.6e-49	67.0	YABBY-like transcription facto...	[more]

BLAST of Spo23478.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
YAB3_ARATH	5.6e-48	60.5	Axial regulator YABBY 3 OS=Ara...	[more]
YAB1_ARATH	3.5e-42	60.1	Axial regulator YABBY 1 OS=Ara...	[more]
YAB3_ORYSJ	4.6e-42	54.1	Protein YABBY 3 OS=Oryza sativ...	[more]
YAB4_ORYSI	3.1e-38	49.7	Protein YABBY 4 OS=Oryza sativ...	[more]
YAB4_ORYSJ	3.1e-38	49.7	Protein YABBY 4 OS=Oryza sativ...	[more]

BLAST of Spo23478.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G00180.1	3.1e-49	60.5	Plant-specific transcription f...	[more]
AT2G45190.1	2.0e-43	60.1	Plant-specific transcription f...	[more]
AT1G08465.1	1.4e-33	50.8	Plant-specific transcription f...	[more]
AT1G23420.1	2.7e-24	40.4	Plant-specific transcription f...	[more]
AT1G69180.1	6.2e-21	39.6	Plant-specific transcription f...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PANTHER	PTHR31675	FAMILY NOT NAMED	coord: 31..204 score: 1.4
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 30..204 score: 6.4
IPR009071	High mobility group box domain	unknown	SSF47095	HMG-box	coord: 153..202 score: 3.4
None	No IPR available	PANTHER	PTHR31675:SF0	AXIAL REGULATOR YABBY 1-RELATED	coord: 31..204 score: 1.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13076	0.73	Barchart \| Table
Spo09972	0.69	Barchart \| Table
Spo18263	0.65	Barchart \| Table