Spo23526 (gene)

Overview
NameSpo23526
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRubredoxin, putative
Locationchr6 : 24353543 .. 24354160 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCCATTACAAGACCAACAACCTTCTCATTCCACCCTACTTCACCTTCTCCAACAAAACCCAGAACTCATTTCATCATATCACCAATCATTTCCCCTAAATCCTACCAAAATTACGCCATCAAGGCGAACCCGAATCGCCTCGATTTCGCCCGAAAATCAATTGATGTGTCAAAAGAAGATAAACCCACTTCAGAACAGCCAAATTTGGATAAACCCATTTCAGAGGAGCTCTATTTAGAGGAACCAAGTTCATCAGATACAGATAGTTTGGATAAACGAAGATTGGAAGAGAAATTCGCTGTTTTAAACACTGGGATTTATGAGTGTAGATCATGCGGGTATAGGTATGATGAAGCTGCAGGTGATCCAAGCTACCCTGTGCCACCAGGGTTGCCCTTTGGGAAGCTGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCCGCAAAGGGGTTTTTTGTGAGTAAGAGTGTAGAGATTGCTGGGTTTGCGCAAAATCAACAGTTTGGACTTGGGGGTAATTCTCTCACTTCTGGTCAGAAGGCTTTGTTTATTTATGGTAGTTTGTTCTTGTTCTTTTGCTTGTTTTTATCAGGCTACTTTTTGCCATAG

mRNA sequence

ATGGCTTCTTCCATTACAAGACCAACAACCTTCTCATTCCACCCTACTTCACCTTCTCCAACAAAACCCAGAACTCATTTCATCATATCACCAATCATTTCCCCTAAATCCTACCAAAATTACGCCATCAAGGCGAACCCGAATCGCCTCGATTTCGCCCGAAAATCAATTGATGTGTCAAAAGAAGATAAACCCACTTCAGAACAGCCAAATTTGGATAAACCCATTTCAGAGGAGCTCTATTTAGAGGAACCAAGTTCATCAGATACAGATAGTTTGGATAAACGAAGATTGGAAGAGAAATTCGCTGTTTTAAACACTGGGATTTATGAGTGTAGATCATGCGGGTATAGGTATGATGAAGCTGCAGGTGATCCAAGCTACCCTGTGCCACCAGGGTTGCCCTTTGGGAAGCTGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCCGCAAAGGGGTTTTTTGTGAGTAAGAGTGTAGAGATTGCTGGGTTTGCGCAAAATCAACAGTTTGGACTTGGGGGTAATTCTCTCACTTCTGGTCAGAAGGCTTTGTTTATTTATGGTAGTTTGTTCTTGTTCTTTTGCTTGTTTTTATCAGGCTACTTTTTGCCATAG

Coding sequence (CDS)

ATGGCTTCTTCCATTACAAGACCAACAACCTTCTCATTCCACCCTACTTCACCTTCTCCAACAAAACCCAGAACTCATTTCATCATATCACCAATCATTTCCCCTAAATCCTACCAAAATTACGCCATCAAGGCGAACCCGAATCGCCTCGATTTCGCCCGAAAATCAATTGATGTGTCAAAAGAAGATAAACCCACTTCAGAACAGCCAAATTTGGATAAACCCATTTCAGAGGAGCTCTATTTAGAGGAACCAAGTTCATCAGATACAGATAGTTTGGATAAACGAAGATTGGAAGAGAAATTCGCTGTTTTAAACACTGGGATTTATGAGTGTAGATCATGCGGGTATAGGTATGATGAAGCTGCAGGTGATCCAAGCTACCCTGTGCCACCAGGGTTGCCCTTTGGGAAGCTGCCTGAGGATTGGAGGTGCCCTACTTGTGGGGCCGCAAAGGGGTTTTTTGTGAGTAAGAGTGTAGAGATTGCTGGGTTTGCGCAAAATCAACAGTTTGGACTTGGGGGTAATTCTCTCACTTCTGGTCAGAAGGCTTTGTTTATTTATGGTAGTTTGTTCTTGTTCTTTTGCTTGTTTTTATCAGGCTACTTTTTGCCATAG

Protein sequence

MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVSKEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTSGQKALFIYGSLFLFFCLFLSGYFLP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23526.1Spo23526.1mRNA


Homology
[Close]
BLAST of Spo23526.1 vs. NCBI nr
Match: gi|902180671|gb|KNA09593.1| (hypothetical protein SOVF_152210 [Spinacia oleracea])

HSP 1 Score: 411.4 bits (1056), Expect = 9.400e-112
Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS
Sbjct: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60

Query: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRYD 120
           KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGI ECRSCGYRYD
Sbjct: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGICECRSCGYRYD 120

Query: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180
           EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS
Sbjct: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180

Query: 181 GQKALFIYGSLFLFFCLFLSGYFLP 206
           GQKALFIYGSLFLFFCLFLSGYFLP
Sbjct: 181 GQKALFIYGSLFLFFCLFLSGYFLP 205
[Close]
BLAST of Spo23526.1 vs. NCBI nr
Match: gi|731328145|ref|XP_010674888.1| (PREDICTED: uncharacterized protein LOC104890964 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 288.9 bits (738), Expect = 7.000e-75
Identity = 147/205 (71.71%), Postives = 167/205 (81.46%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MAS+ITRPTTFSFH +SPSP KP+ HF  S  IS K+++ + ++   N L+   KS+DVS
Sbjct: 1   MASAITRPTTFSFHLSSPSPPKPKLHFTTS-TISSKTHKFFPLQNTSNGLNLTPKSVDVS 60

Query: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRYD 120
           KED+P  E PN           EEPSSSD+++ DKRRLEEKFAVLNTGIYECRSCGY+YD
Sbjct: 61  KEDQPIIENPN----------SEEPSSSDSENFDKRRLEEKFAVLNTGIYECRSCGYKYD 120

Query: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180
           E+AGDP+YPVPPGLPF +LPEDWRCPTCGAAK FF SKSVEIAGFAQNQQFGLGGNSLTS
Sbjct: 121 ESAGDPNYPVPPGLPFSQLPEDWRCPTCGAAKSFFDSKSVEIAGFAQNQQFGLGGNSLTS 180

Query: 181 GQKALFIYGSLFLFFCLFLSGYFLP 206
           GQKAL IYG+LF FF LFLSGYFLP
Sbjct: 181 GQKALLIYGALFAFFLLFLSGYFLP 194
[Close]
BLAST of Spo23526.1 vs. NCBI nr
Match: gi|225451241|ref|XP_002276406.1| (PREDICTED: uncharacterized protein LOC100259018 [Vitis vinifera])

HSP 1 Score: 248.8 bits (634), Expect = 8.100e-63
Identity = 134/208 (64.42%), Postives = 155/208 (74.52%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSP----SPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKS 60
           MA + TRPT FSFH ++     SP KP+ H    P + PK     A+   P +  F+ +S
Sbjct: 1   MACATTRPT-FSFHLSTTLPQQSPPKPKPHLTFPPHL-PKIPSISALH-KPPKAQFSSRS 60

Query: 61  IDVSKEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCG 120
           +DVSKEDKPTSEQP+   P S+          + ++ DKRRLEEKFAVLNTGIYECRSCG
Sbjct: 61  VDVSKEDKPTSEQPDSSTPTSDS------PPQEPENFDKRRLEEKFAVLNTGIYECRSCG 120

Query: 121 YRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGN 180
           Y+YDEAAGDPSYP+PPGL F KLP+DWRCPTCGAA+ FF SKSVEIAGFAQNQQFGLGGN
Sbjct: 121 YKYDEAAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFESKSVEIAGFAQNQQFGLGGN 180

Query: 181 SLTSGQKALFIYGSLFLFFCLFLSGYFL 205
           +LTSGQKA+ IYGSL  FF LFLSGYFL
Sbjct: 181 TLTSGQKAVLIYGSLLFFFVLFLSGYFL 199
[Close]
BLAST of Spo23526.1 vs. NCBI nr
Match: gi|802757898|ref|XP_012089210.1| (PREDICTED: uncharacterized protein LOC105647652 [Jatropha curcas])

HSP 1 Score: 247.3 bits (630), Expect = 2.300e-62
Identity = 137/205 (66.83%), Postives = 148/205 (72.20%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MAS+ TRPT FSFH + P   +P THF  S  +S         K    +  F  +SIDVS
Sbjct: 1   MASATTRPT-FSFHLSHP---RPNTHFSKSSFLS-------LYKTPKTQTHFTIRSIDVS 60

Query: 61  KEDK-PTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRY 120
           KEDK PTS Q ++  P      LE P   +    DKRRLEEKFAVLNTGIYECRSCGY+Y
Sbjct: 61  KEDKRPTSNQQSIPTP------LESPPQEEEPKFDKRRLEEKFAVLNTGIYECRSCGYKY 120

Query: 121 DEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLT 180
           DEA GDPSYP+PPGL F KLPEDWRCPTCGAAK FF SKSVEIAGFAQNQQFGLGGNSLT
Sbjct: 121 DEAVGDPSYPIPPGLQFDKLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQFGLGGNSLT 180

Query: 181 SGQKALFIYGSLFLFFCLFLSGYFL 205
           SGQKA  IYGSL LFF LFLSGYFL
Sbjct: 181 SGQKAALIYGSLLLFFALFLSGYFL 188
[Close]
BLAST of Spo23526.1 vs. NCBI nr
Match: gi|657992790|ref|XP_008388654.1| (PREDICTED: uncharacterized protein LOC103451011 [Malus domestica])

HSP 1 Score: 245.7 bits (626), Expect = 6.800e-62
Identity = 137/206 (66.50%), Postives = 152/206 (73.79%), Query Frame = 1 

		  

Query: 6   TRPTTFSFHPTSPSPT----KPRTHFI---ISPIISPKSYQNYAIKANPNRLDFARKSID 65
           TRPT FSFH +   P     KPRT F    + P +   S     I   P++L  +  SID
Sbjct: 5   TRPT-FSFHLSXTFPQHSHPKPRTQFPYPHLLPKVQTFSLSLTHIPPKPHKL--SANSID 64

Query: 66  VSKEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYR 125
           VSKEDKPTSE+P    P S    +E     +T   DKRRLEEKFAVLNTG+YECRSCGY+
Sbjct: 65  VSKEDKPTSEEPTSPPPASSVDPVEPAEELET-KFDKRRLEEKFAVLNTGVYECRSCGYK 124

Query: 126 YDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSL 185
           YDEA GDPSYPVPPGLPF KLPEDWRCPTCGAA+GFFVSKSVEIAGFAQNQQFGLGGN+L
Sbjct: 125 YDEAMGDPSYPVPPGLPFDKLPEDWRCPTCGAAQGFFVSKSVEIAGFAQNQQFGLGGNTL 184

Query: 186 TSGQKALFIYGSLFLFFCLFLSGYFL 205
           TSGQKA+ I+G LFLFF LFLSGYFL
Sbjct: 185 TSGQKAVLIFGGLFLFFVLFLSGYFL 206
[Close]
BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_152210 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 6.500e-112
Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS
Sbjct: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60

Query: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRYD 120
           KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGI ECRSCGYRYD
Sbjct: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGICECRSCGYRYD 120

Query: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180
           EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS
Sbjct: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180

Query: 181 GQKALFIYGSLFLFFCLFLSGYFLP 206
           GQKALFIYGSLFLFFCLFLSGYFLP
Sbjct: 181 GQKALFIYGSLFLFFCLFLSGYFLP 205
[Close]
BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CN52_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082380 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.900e-75
Identity = 147/205 (71.71%), Postives = 167/205 (81.46%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MAS+ITRPTTFSFH +SPSP KP+ HF  S  IS K+++ + ++   N L+   KS+DVS
Sbjct: 1   MASAITRPTTFSFHLSSPSPPKPKLHFTTS-TISSKTHKFFPLQNTSNGLNLTPKSVDVS 60

Query: 61  KEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRYD 120
           KED+P  E PN           EEPSSSD+++ DKRRLEEKFAVLNTGIYECRSCGY+YD
Sbjct: 61  KEDQPIIENPN----------SEEPSSSDSENFDKRRLEEKFAVLNTGIYECRSCGYKYD 120

Query: 121 EAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLTS 180
           E+AGDP+YPVPPGLPF +LPEDWRCPTCGAAK FF SKSVEIAGFAQNQQFGLGGNSLTS
Sbjct: 121 ESAGDPNYPVPPGLPFSQLPEDWRCPTCGAAKSFFDSKSVEIAGFAQNQQFGLGGNSLTS 180

Query: 181 GQKALFIYGSLFLFFCLFLSGYFLP 206
           GQKAL IYG+LF FF LFLSGYFLP
Sbjct: 181 GQKALLIYGALFAFFLLFLSGYFLP 194
[Close]
BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Match: F6HTU5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0030g01590 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.600e-63
Identity = 134/208 (64.42%), Postives = 155/208 (74.52%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSP----SPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKS 60
           MA + TRPT FSFH ++     SP KP+ H    P + PK     A+   P +  F+ +S
Sbjct: 1   MACATTRPT-FSFHLSTTLPQQSPPKPKPHLTFPPHL-PKIPSISALH-KPPKAQFSSRS 60

Query: 61  IDVSKEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCG 120
           +DVSKEDKPTSEQP+   P S+          + ++ DKRRLEEKFAVLNTGIYECRSCG
Sbjct: 61  VDVSKEDKPTSEQPDSSTPTSDS------PPQEPENFDKRRLEEKFAVLNTGIYECRSCG 120

Query: 121 YRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGN 180
           Y+YDEAAGDPSYP+PPGL F KLP+DWRCPTCGAA+ FF SKSVEIAGFAQNQQFGLGGN
Sbjct: 121 YKYDEAAGDPSYPIPPGLQFDKLPDDWRCPTCGAARSFFESKSVEIAGFAQNQQFGLGGN 180

Query: 181 SLTSGQKALFIYGSLFLFFCLFLSGYFL 205
           +LTSGQKA+ IYGSL  FF LFLSGYFL
Sbjct: 181 TLTSGQKAVLIYGSLLFFFVLFLSGYFL 199
[Close]
BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Match: A0A067JUG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23458 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.600e-62
Identity = 137/205 (66.83%), Postives = 148/205 (72.20%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANPNRLDFARKSIDVS 60
           MAS+ TRPT FSFH + P   +P THF  S  +S         K    +  F  +SIDVS
Sbjct: 1   MASATTRPT-FSFHLSHP---RPNTHFSKSSFLS-------LYKTPKTQTHFTIRSIDVS 60

Query: 61  KEDK-PTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTGIYECRSCGYRY 120
           KEDK PTS Q ++  P      LE P   +    DKRRLEEKFAVLNTGIYECRSCGY+Y
Sbjct: 61  KEDKRPTSNQQSIPTP------LESPPQEEEPKFDKRRLEEKFAVLNTGIYECRSCGYKY 120

Query: 121 DEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLT 180
           DEA GDPSYP+PPGL F KLPEDWRCPTCGAAK FF SKSVEIAGFAQNQQFGLGGNSLT
Sbjct: 121 DEAVGDPSYPIPPGLQFDKLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQFGLGGNSLT 180

Query: 181 SGQKALFIYGSLFLFFCLFLSGYFL 205
           SGQKA  IYGSL LFF LFLSGYFL
Sbjct: 181 SGQKAALIYGSLLLFFALFLSGYFL 188
[Close]
BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Match: W9R6S1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006182 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.400e-61
Identity = 138/216 (63.89%), Postives = 154/216 (71.30%), Query Frame = 1 

		  

Query: 1   MASSITRPTTFSFH------PTSPSPTKPRTHFIISPIISPK------SYQNYAIKANPN 60
           MA + TRPT FSFH       T   P    THF  +P + PK      S    A+   P 
Sbjct: 1   MACATTRPT-FSFHISTSFSQTCSLPKSKPTHFS-NPTLLPKIPSFSLSLPQKALNKPPK 60

Query: 61  RLDFARKSIDVSKEDKPTSEQPNLDKPISEELYLEEPSSSDTDSLDKRRLEEKFAVLNTG 120
              F   SIDVSKEDKPTS+Q +   P  EE   E+    + D+ DKRRLEEKFAVLNTG
Sbjct: 61  ---FITNSIDVSKEDKPTSDQTSSTPPQVEE-QPEKEQEQEQDTFDKRRLEEKFAVLNTG 120

Query: 121 IYECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQN 180
           IYECRSCGY+YDEA GDPSYP+PPGLPF KLPEDWRCPTCGA++ FF SKSVEIAGFAQN
Sbjct: 121 IYECRSCGYKYDEAVGDPSYPIPPGLPFEKLPEDWRCPTCGASQSFFESKSVEIAGFAQN 180

Query: 181 QQFGLGGNSLTSGQKALFIYGSLFLFFCLFLSGYFL 205
           QQFGLGGN+LTSGQKA+ IYG+LFLFF LFLSGYFL
Sbjct: 181 QQFGLGGNALTSGQKAILIYGTLFLFFVLFLSGYFL 210
[Close]
BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Match: RUBR_METTH (Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=MTH_155 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.200e-10
Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1 

		  

Query: 110 YECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFF 156
           Y+CR CGY YD   G+P    PPG PF  LPE WRCP+CGA K  F
Sbjct: 14  YKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMF 59
[Close]
BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Match: HRB_MOOTA (High molecular weight rubredoxin OS=Moorella thermoacetica (strain ATCC 39073) GN=hrb PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.100e-10
Identity = 25/46 (54.35%), Postives = 28/46 (60.87%), Query Frame = 1 

		  

Query: 110 YECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFF 156
           Y+C  C Y YD   GDP + + PG PF  LPEDW CP CGA K  F
Sbjct: 181 YQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAF 226
[Close]
BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Match: RUBR4_RHOSQ (Rubredoxin 4 OS=Rhodococcus sp. (strain Q15) GN=rubA4 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.900e-10
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1 

		  

Query: 109 IYECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVE 162
           +Y+C  CG+ YDEA G P   + PG  +  +PEDW CP CGAAK  F    VE
Sbjct: 6   LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
[Close]
BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Match: RUBR4_RHOER (Rubredoxin 4 OS=Rhodococcus erythropolis GN=rubA4 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.900e-10
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1 

		  

Query: 109 IYECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVE 162
           +Y+C  CG+ YDEA G P   + PG  +  +PEDW CP CGAAK  F    VE
Sbjct: 6   LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
[Close]
BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Match: RUBR_DESGI (Rubredoxin OS=Desulfovibrio gigas PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.000e-9
Identity = 26/47 (55.32%), Postives = 29/47 (61.70%), Query Frame = 1 

		  

Query: 109 IYECRSCGYRYDEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFF 156
           IY C  CGY YD A GDP   + PG  F  LP+DW CP CGA+K  F
Sbjct: 3   IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAF 49
[Close]
BLAST of Spo23526.1 vs. TAIR (Arabidopsis)
Match: AT1G54500.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 198.0 bits (502), Expect = 5.800e-51
Identity = 110/205 (53.66%), Postives = 134/205 (65.37%), Query Frame = 1 

		  

Query: 10  TFSFHPTSPSPTKPRTHFIISPIISPKSYQNYAIKANP---------NRLDFARKSIDVS 69
           TFSF P S S          S +I P  +  Y  K +          +      + + VS
Sbjct: 5   TFSFCPLSQSHPH-------SSLIKPTPFLRYGKKLHHLHHHIFITISYPSHHSRYLAVS 64

Query: 70  KEDKPTSEQPNLDKPISEELYLEEPSSSDT-DSLDKRRLEEKFAVLNTGIYECRSCGYRY 129
           ++D  T        P+S     +E  + +  D+++KRR+EEKFAVLNTGIYECRSCGY+Y
Sbjct: 65  RDDAAT--------PLSSSDQTQETETKEVEDTIEKRRMEEKFAVLNTGIYECRSCGYKY 124

Query: 130 DEAAGDPSYPVPPGLPFGKLPEDWRCPTCGAAKGFFVSKSVEIAGFAQNQQFGLGGNSLT 189
           DE+AGDPSYP+PPG  F KLPEDWRCPTCGAA+ FF SK VEIAGFAQNQQ+GLGGN+LT
Sbjct: 125 DESAGDPSYPIPPGFQFDKLPEDWRCPTCGAAQSFFESKMVEIAGFAQNQQYGLGGNALT 184

Query: 190 SGQKALFIYGSLFLFFCLFLSGYFL 205
           SGQK   I+GSL LFF LFLSGYF+
Sbjct: 185 SGQKTGLIFGSLLLFFALFLSGYFI 194
The following BLAST results are available for this feature:
BLAST of Spo23526.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902180671|gb|KNA09593.1|9.4e-11299.5hypothetical protein SOVF_1522... [more]
gi|731328145|ref|XP_010674888.1|7.0e-7571.7PREDICTED: uncharacterized pro... [more]
gi|225451241|ref|XP_002276406.1|8.1e-6364.4PREDICTED: uncharacterized pro... [more]
gi|802757898|ref|XP_012089210.1|2.3e-6266.8PREDICTED: uncharacterized pro... [more]
gi|657992790|ref|XP_008388654.1|6.8e-6266.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo23526.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QSB2_SPIOL6.5e-11299.5Uncharacterized protein OS=Spi... [more]
A0A0J8CN52_BETVU4.9e-7571.7Uncharacterized protein OS=Bet... [more]
F6HTU5_VITVI5.6e-6364.4Putative uncharacterized prote... [more]
A0A067JUG3_JATCU1.6e-6266.8Uncharacterized protein OS=Jat... [more]
W9R6S1_9ROSA1.4e-6163.8Uncharacterized protein OS=Mor... [more]
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BLAST of Spo23526.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RUBR_METTH1.2e-1058.7Probable rubredoxin OS=Methano... [more]
HRB_MOOTA6.1e-1054.3High molecular weight rubredox... [more]
RUBR4_RHOSQ7.9e-1049.0Rubredoxin 4 OS=Rhodococcus sp... [more]
RUBR4_RHOER7.9e-1049.0Rubredoxin 4 OS=Rhodococcus er... [more]
RUBR_DESGI1.0e-955.3Rubredoxin OS=Desulfovibrio gi... [more]
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BLAST of Spo23526.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G54500.15.8e-5153.6Rubredoxin-like superfamily pr... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004039Rubredoxin-type foldGENE3D2.20.28.10coord: 106..159
score: 2.7
IPR018527Rubredoxin, iron-binding sitePROSITEPS00202RUBREDOXINcoord: 139..149
scor
IPR024934Rubredoxin-like domainPROFILEPS50903RUBREDOXIN_LIKEcoord: 107..158
score: 13
IPR024935Rubredoxin domainPRINTSPR00163RUBREDOXINcoord: 109..125
score: 4.5E-9coord: 139..155
score: 4.
IPR024935Rubredoxin domainPFAMPF00301Rubredoxincoord: 110..155
score: 1.7
NoneNo IPR availablePANTHERPTHR10909ELECTRON TRANSPORT OXIDOREDUCTASEcoord: 93..178
score: 3.9
NoneNo IPR availableunknownSSF57802Rubredoxin-likecoord: 106..172
score: 7.57

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006412 translation
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0042793 plastid transcription
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009987 cellular process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0015031 protein transport
biological_process GO:0030154 cell differentiation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0032502 developmental process
biological_process GO:0016556 mRNA modification
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0015979 photosynthesis
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0009902 chloroplast relocation
biological_process GO:0042742 defense response to bacterium
cellular_component GO:0009579 thylakoid
cellular_component GO:0009295 nucleoid
cellular_component GO:0019898 extrinsic component of membrane
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009509 chromoplast
cellular_component GO:0009513 etioplast
cellular_component GO:0009654 photosystem II oxygen evolving complex
cellular_component GO:0009537 proplastid
cellular_component GO:0009501 amyloplast
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009536 plastid
molecular_function GO:0003723 RNA binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005515 protein binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005506 iron ion binding
RNA-Seq Expression