Spo23536 (gene) | SpinachBase

Overview


Name	Spo23536
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Myb-like transcription factor family protein
Location	chr6 : 24548970 .. 24554117 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATGGTATAACTATGGATTCCGGCCGTGTATGCTTGATGGGTGACCAAAATTTCCATCGTTGCCCATTCATGTGTTGGTCATGTGACCCTTAAACAAAGCCATCTCCCTCGATTTTGCTCGCTCAATTTCCCAACCTTCACTTACTTTACTTTGTTTCTCTCCCTTCTGTTCTCGATTCTCCTAAAAAAAAAAATACAAAAATCCAATTCTCAAATTAATTGATAATTTCCTCTTAGCTTTCAAATTGTCACCGAAATCGAAGGCTTGGAAGCTCCACTGTTGACTCACTCATTTTAGCAAAGTTGTTGTTTGGGTTTCTAGCAATAAAGATAGAAGTTCAATAATTTGTTGCAAAATCGTGAAATTAGTCTAGAGTTTTGCTATGTAACCTATGCAAGAGAATGAAGGTGCAGATTTTTTTGTTTGCATGTTTAATTAGTTAAAAAAGAGGTAGTACTGTTTTTCTGGGTTTGAAGATAAAAAAGGAACTGGGATTTCTGGGTTTTTTTTGGTTTTGTCGGGTTGGGAATACGTGACATGTGAGTTGTTGATTACATATGGGATTGAACTCACTGAAAATTATGTGTTTGTGGGTTTGAGTTTTGATAATGTCATGGGAAAATGTAAGGTATTTTGGGGTGCACAGAAGGTGTTTGATGAAATGTTTGGGAGAAATGTTGTTTCTTGGACTTGTATCCCGTGTATGCTTGATGGGTATGTTTATTGTGAGGACTTGATTAGTGGCGAAAGGGAGTTGGATGCAATGCCGAAGAGAAATCAGGTCTCATGGAATGCCATGATATTGAAGCAGAAGACAGAGATGAAGCAGAGAGCTCAAAGAGGAAGAAGGGAAAATCAAAGGAGAAAGGAAGGAAGCAAAGGAGGGAAAACTAAAAAAACAAGGAAAAATCTTGTATAAAATGGACATGTTGATTGACATATTAGTCAATTCCAACTCGATACGACGACACGGCCTGAACCATCTCTACAGAGAAGTATCTGGGAAAGAAAGGGGAGCTTAAATAATAATTGCTGACGTGGTATAACCGTCAGGAAAATACTGTTGCGAGAATTGAAGCCCATTTATGTTTTGGCGCTCAAAAACACAATTCAACTCTTTCCCCTGTTACTCTTCTCTGATCAAACCCAAACACTAAAACATTCAAGAACAAATTCTCTCTCCTCCCCCTGTAACTCAACTCTGATTAAACCCAAACGCTAAAATCTTTCAAGATTGTAATCGCCATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATCTGGCGTAAGTTCTTCACTCAATTCTTTAACTGGGTTTTATTTTTAGATTCTTAATGTTAGTCTTCTCCAATTTCTTTTGCATGATCGAATTTCTGTTAATGATATCTTACGAGTGAATAGTGCTTCATTCAACTTGGTGTTTACTTTCCTGATTAGTTTCTTCCATTTTTATCATCATTTACTGTCCTGGTCAGAATATTAGTGAAATCATCCTGTCGTACTTGTGTTCAATTGATTATTTTGAATGTTATGGATGTTGAGGATGTTCTTGAGTCTGGCTTTGATGATAATGAGACTGGCTCTGATGTAATAATATTGATGTAATAATATTTACCTCTCAATTTACTTCTGCATTATCGTTTTTCTGGGTTAATTGAACCTTCTGAATGACTTTTAATGGCGAATTAACAGAAAAGAATCAAAGGGGTACGTGTTAAAATTATAAAGTCACGAATGGCCGCCATTACTAAGCTTCGTTTTCACTCATGGAGTTCCACTAACTATGACATTACATCATCTAACTATAACTACGACTTACAAAAACAGTAATATGCCCATGTACATCCTCCAAACAACTTCTTGTTTCTGAATCACCAACTTTGTGGCTTTATTCAACTTGGCATAAACTAGAACAAAAGCTTAGTTTCTTAGGATTTTGGTTTATGTTTTTAATCTCGTTACAATAATATTGGTGTTGTTACCATGAAATCGTTCATCTCGTAGTTTGTTCAAGATTAATGCATTTCGGTTACCTTTTTGAATGAAGTAAATGTTAATTTGTTGGCTGAAATGCTTGGTGTAATAACAATTTCATGTGACATGCTTGGTTTTCTTTGATAGATTTCTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTGACAATGAGCATCCTGAAACTGGTGAAAATTCTATGATACCTCAGCCAGATGAGCCCCTCCAACAGATAAGTACAGAATTAGTACTGGCAATTCCATGTAGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAACGAGGGAAACTGGTTCAAGTAGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAAGTAGCCAGAGTAATCATCAGTTGGAATCTGGTTCAGGTATGCTTGAGAAGAACCATCAGTTACGCATCATTATATTTTAAAGCAATTATCTTAGATCACGTTGCTCTCATTAGTCATTACTGATCATCTACGATTCTGAACGAAGGGATCTCGGGTTCATACCATTTGGAAAGCCCTTGCACAAGTAATTATTCTTCAAGCTTGCCAACAAATAACATGGATGAGTAAGAATTTGTGAATCTCAATTTACATTTAAGGCCTTATTTTTTTTACTCTTAAAACATCTAGTATTTGCTAACACTCTGGTGAATTGGGCTTGAGAAGGGGTTTTAAGGTTAAGGAGGCATTAAGAAGTCAGTTGGAGGTGCAGACTAAACTACATTTGCAGGTTGAGGTATGGAAATTCCCTTGGCTGAGTGCATGTAACATTAAGGCTTCACTCTTAAATCTTAATCCCTTAAAAATATTTATTTGAATGTATTGGGACTTGGCTTAACTTATCCGAACTTAATTTTCCTCAAAACTCCTCAAAACTTAATTTCATTAAAGTGAAAAGAACAAACCTTTGTATTGTTGATTTTGTGGTCTATCACTCATTGTTTTCTGCTAGAAGTTGAAGGCAATTGATCAGTTTGTTTATTTCTTTACTTATTGTAGGCTGAGAAGCACTTACAGCTATGCCAGGATGCAGAACGAAGATACATGGCGGCGATGATTGAAAGAGCTTGTAAGATACTGTTGATCGATAGTTATCCATGTCTATTTTCATTTTCTTGTATGCTTCTGGCGCTGTTTAGATTTTAAAATCATGATACAACATCCTGACATTGTTTACATTGCATCCTTACGCGGGAACTTTGGTTTGGGAACTAGAATGAAGTTATCGAGTAACAATTGAGGCTGTAACCTGCATACCTTCAGTTTAATGCTTACCTTATTGAAAGAGCTTGTAAGACACGTTAATTCCCTGCATACCTTATTGCTTAAACATTTTAAAAATGATTAAGAAGTAAAACATTTTAAAAATGAATTTACAAGTCTACGCTTGACACGGTGGTAGCAAAAAGTTCATACTTGTCTCTAAGAGAATATGCACATTTGGATAATCATCAGTTTGTTCCCTGCATACCATTGCTTAATGCTTAATGTTTATGATGATGTCAAATCTGTCATGAATCTTATGGTATGGGGAATTGACAGGTAGACAACTGCAGCAAGCCCCCCCACATGGATTCAACCTTTCTCCATCTGCACCTGCTTCATTTCAGTACGGTCATGTTTCATGCCAAGGCCAGGTATGGTGATGCAACTTATCTTTTACGATGAAACTGTTATGAAAATCGGGAGTTTTGATTCAATTAGGCAGGGGAAATGATTTTTTGAATCCAAATATGCAAATTCAGAACAATTGGACAATTTGGGTACATCAAAAGGCCCTCGATATTTTTCATTGCTGCATTTTTGTCACAAATAAGTCGTGTTAAGATACTGCATTATTGATCAGAGTGACATACTGCTGATGATTGATCACTGTCAGGCACTAGCAATATGAATTGCCATGCATGCTGTTTCTTCCTATCTGTCTATCTGTTAAGGAGGTCTATATCAAACTAGGTAACAATTGAGAAAAACTTAGGTACTACTTATTAGTTAATTAACCTGATTATAATCTCCAATGCATCCCTGATGCACAACTGTAATGCAGTTTAATTATACAATGTTTGTAAATATTGCCTTTAAGTTTGTGCATCAATTTACCTTGTTGCTGGTTGCTGGTTGCATACAACAACAACAACAACAACAACAACAACAACAACAACAACAAAGCCTTAGTCCCAACAACATCGATTTACCTTGTTGCTTGTTGCTGGTTGCATAACATAAAATTAATGAGGAAATTAGCCATTTGAATTAATGTGGAATAACGAACCAGGCATAAAACAATATTACAGTATCACATTTTTTACAGTATTATACATCTTGCTCTAACAATCACTTAAATGCTAACGATGGCTACTCTGATTCAGTGTATGTCTGCAGATCACAGTGTAGTACCAGCAAAATATAAAAAAGATGGAATAAAACTGAAGTAGGTGTTTTATGTAGCCAACCAAAATTATGACCCAAGAGAGCGCACGTAAAAATATATTATTGGCTGGACTAAACTCCCTTCAGTACTACTTATAAAGATAGTATTGGCTGTGAACATGAATGAAGAATGCCTGATATATACTATATCATTAGTAGAGATCCATTGTCATTAGGGTACTTAGTGAACTTTATTTTCATGGTTTTAATAGTCGTTTAAATTAATGAATCAGATGACTGTTCTCAGTGAGGAAAAGACTTTGAAATTATAGAAACTAATCATATTTTTACAGGATGCGTACTCGGATACGACCTCAGACGAGTCATATACCAACTTCACTTACATACCTGTTGATGCGGTCGATGAAGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGATGTGGTCAATGAGGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGAGCCCGCCGAGGAGGGAGGTGGGGGATGGAAAGTTTGCTGTTGTTATATTTTCGCCTCTGCGTTTTTTGTTTTAGTTTATGCTTGGATTAAACTCTCCATGATGAGTCAGTAAACAGTGTTTTGTATGTACTTTGTGACAGAAAATAAAACCATAATTGTTGATTTGTTGATATCAATTATGTACCCTAGAG

mRNA sequence

AAAATGGTATAACTATGGATTCCGGCCGTGTATGCTTGATGGGTGACCAAAATTTCCATCGTTGCCCATTCATGTGTTGGTCATGTGACCCTTAAACAAAGCCATCTCCCTCGATTTTGCTCGCTCAATTTCCCAACCTTCACTTACTTTACTTTGTTTCTCTCCCTTCTGTTCTCGATTCTCCTAAAAAAAAAAATACAAAAATCCAATTCTCAAATTAATTGATAATTTCCTCTTAGCTTTCAAATTGTCACCGAAATCGAAGGCTTGGAAGCTCCACTGTTGACTCACTCATTTTAGCAAAGTTGTTGTTTGGGTTTCTAGCAATAAAGATAGAAGTTCAATAATTTGTTGCAAAATCGTGAAATTAGTCTAGAGTTTTGCTATGTAACCTATGCAAGAGAATGAAGGTGCAGATTTTTTTGTTTGCATGTTTAATTAGTTAAAAAAGAGGTAGTACTGTTTTTCTGGGTTTGAAGATAAAAAAGGAACTGGGATTTCTGGGTTTTTTTTGGTTTTGTCGGGTTGGGAATACGTGACATGTGAGTTGTTGATTACATATGGGATTGAACTCACTGAAAATTATGTGTTTGTGGGTTTGAGTTTTGATAATGTCATGGGAAAATGTAAGGTATTTTGGGGTGCACAGAAGGTGTTTGATGAAATGTTTGGGAGAAATGTTGTTTCTTGGACTTGTATCCCGTGTATGCTTGATGGGTATGTTTATTGTGAGGACTTGATTAGTGGCGAAAGGGAGTTGGATGCAATGCCGAAGAGAAATCAGGTCTCATGGAATGCCATGATATTGAAGCAGAAGACAGAGATGAAGCAGAGAGCTCAAAGAGGAAGAAGGGAAAATCAAAGGAGAAAGGAAGGAAGCAAAGGAGGGAAAACTAAAAAAACAAGGAAAAATCTTGTATAAAATGGACATGTTGATTGACATATTAGTCAATTCCAACTCGATACGACGACACGGCCTGAACCATCTCTACAGAGAAGTATCTGGGAAAGAAAGGGGAGCTTAAATAATAATTGCTGACGTGGTATAACCGTCAGGAAAATACTGTTGCGAGAATTGAAGCCCATTTATGTTTTGGCGCTCAAAAACACAATTCAACTCTTTCCCCTGTTACTCTTCTCTGATCAAACCCAAACACTAAAACATTCAAGAACAAATTCTCTCTCCTCCCCCTGTAACTCAACTCTGATTAAACCCAAACGCTAAAATCTTTCAAGATTGTAATCGCCATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATCTGGCATTTCTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTGACAATGAGCATCCTGAAACTGGTGAAAATTCTATGATACCTCAGCCAGATGAGCCCCTCCAACAGATAAGTACAGAATTAGTACTGGCAATTCCATGTAGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAACGAGGGAAACTGGTTCAAGTAGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAAGTAGCCAGAGTAATCATCAGTTGGAATCTGGTTCAGGGATCTCGGGTTCATACCATTTGGAAAGCCCTTGCACAAGTAATTATTCTTCAAGCTTGCCAACAAATAACATGGATGAGGGTTTTAAGGTTAAGGAGGCATTAAGAAGTCAGTTGGAGGTGCAGACTAAACTACATTTGCAGGTTGAGGCTGAGAAGCACTTACAGCTATGCCAGGATGCAGAACGAAGATACATGGCGGCGATGATTGAAAGAGCTTGTAGACAACTGCAGCAAGCCCCCCCACATGGATTCAACCTTTCTCCATCTGCACCTGCTTCATTTCAGTACGGTCATGTTTCATGCCAAGGCCAGGATGCGTACTCGGATACGACCTCAGACGAGTCATATACCAACTTCACTTACATACCTGTTGATGCGGTCGATGAAGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGATGTGGTCAATGAGGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGAGCCCGCCGAGGAGGGAGGTGGGGGATGGAAAGTTTGCTGTTGTTATATTTTCGCCTCTGCGTTTTTTGTTTTAGTTTATGCTTGGATTAAACTCTCCATGATGAGTCAGTAAACAGTGTTTTGTATGTACTTTGTGACAGAAAATAAAACCATAATTGTTGATTTGTTGATATCAATTATGTACCCTAGAG

Coding sequence (CDS)

ATGGATAACGGGAAGGGCAAGAACAAAGTAGATGAATACGATCAAGAACAGAATTATGAAGATGAATCTGGCATTTCTACTTTAAGGCAGAATCCAGATATAATTGGTAGCAGTTCAAGTGACAATGAGCATCCTGAAACTGGTGAAAATTCTATGATACCTCAGCCAGATGAGCCCCTCCAACAGATAAGTACAGAATTAGTACTGGCAATTCCATGTAGTCAAATTCAACGATCTCAGAGACTAAGTGATGAAGGTTCTGGAAGGAAGAGAACGAGGGAAACTGGTTCAAGTAGCCAGAGTCAATTTCATCATCAGTTGGAATCTGGTTCAAGTAGCCAGAGTAATCATCAGTTGGAATCTGGTTCAGGGATCTCGGGTTCATACCATTTGGAAAGCCCTTGCACAAGTAATTATTCTTCAAGCTTGCCAACAAATAACATGGATGAGGGTTTTAAGGTTAAGGAGGCATTAAGAAGTCAGTTGGAGGTGCAGACTAAACTACATTTGCAGGTTGAGGCTGAGAAGCACTTACAGCTATGCCAGGATGCAGAACGAAGATACATGGCGGCGATGATTGAAAGAGCTTGTAGACAACTGCAGCAAGCCCCCCCACATGGATTCAACCTTTCTCCATCTGCACCTGCTTCATTTCAGTACGGTCATGTTTCATGCCAAGGCCAGGATGCGTACTCGGATACGACCTCAGACGAGTCATATACCAACTTCACTTACATACCTGTTGATGCGGTCGATGAAGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGATGTGGTCAATGAGGATGTGGTTGATGAGGATGAGGTCGAGGAGGATGAGCCCGCCGAGGAGGGAGGTGGGGGATGGAAAGTTTGCTGTTGTTATATTTTCGCCTCTGCGTTTTTTGTTTTAGTTTATGCTTGGATTAAACTCTCCATGATGAGTCAGTAA

Protein sequence

MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPLQQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQSNHQLESGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESYTNFTYIPVDAVDEDVVDEDEVEEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIFASAFFVLVYAWIKLSMMSQ

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23536.1	Spo23536.1	mRNA

Homology

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BLAST of Spo23536.1 vs. NCBI nr
Match: gi|902186708|gb|KNA10768.1| (hypothetical protein SOVF_141220 [Spinacia oleracea])

HSP 1 Score: 592.4 bits (1526), Expect = 4.600e-166
Identity = 311/317 (98.11%), Postives = 313/317 (98.74%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQSNHQLE 120
           QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQ HHQLE+GSSSQSNHQLE
Sbjct: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQIHHQLETGSSSQSNHQLE 120

Query: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQL 180
           SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQ EAEKHLQL
Sbjct: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQAEAEKHLQL 180

Query: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240
           CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY
Sbjct: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240

Query: 241 TNFTYIPVDAVDEDVVDEDEVEEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIFAS 300
           TNFTYIPVDAVDEDVVDEDE+EEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIF S
Sbjct: 241 TNFTYIPVDAVDEDVVDEDEIEEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIFVS 300

Query: 301 AFFVLVYAWIKLSMMSQ 318
           AFFVLVYAWI LSMMSQ
Sbjct: 301 AFFVLVYAWIILSMMSQ 317

[Close]

BLAST of Spo23536.1 vs. NCBI nr
Match: gi|902235858|gb|KNA24111.1| (hypothetical protein SOVF_018830 [Spinacia oleracea])

HSP 1 Score: 266.2 bits (679), Expect = 7.500e-68
Identity = 169/259 (65.25%), Postives = 182/259 (70.27%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDE GI TLRQNPDIIGSSSS NE PE+GE S+I +PDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQSNHQLE 120
           +QIST+LVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQFH            HQLE
Sbjct: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFH------------HQLE 120

Query: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQL 180
           SGSG+SGSYHLESP TSN SSSLP +NMDE           L+VQTKLHLQVEAEKHLQL
Sbjct: 121 SGSGVSGSYHLESPGTSNSSSSLPISNMDE-----------LQVQTKLHLQVEAEKHLQL 180

Query: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240
            QDAERRYMA M+ER C   QQA   G NL P AP             D  S+T S   Y
Sbjct: 181 RQDAERRYMAVMLERVC---QQATQPGDNLIPPAPQ---------LTTDFPSETYSPYLY 224

Query: 241 TN----FTYIPVDAVDEDV 256
           TN       + V  V+ED+
Sbjct: 241 TNNCAWHKQLNVREVEEDI 224

[Close]

BLAST of Spo23536.1 vs. NCBI nr
Match: gi|902183862|gb|KNA10191.1| (hypothetical protein SOVF_146730 [Spinacia oleracea])

HSP 1 Score: 188.0 bits (476), Expect = 2.600e-44
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDN KGKN+VDEYDQEQ+ EDESGI  LRQNPDIIG+SSSDNE PETGENSMIPQPDEPL
Sbjct: 1   MDNRKGKNEVDEYDQEQHNEDESGICNLRQNPDIIGNSSSDNELPETGENSMIPQPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 112
           +QIST+LVLA+PCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS
Sbjct: 61  RQISTDLVLAVPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 111

[Close]

BLAST of Spo23536.1 vs. NCBI nr
Match: gi|902183243|gb|KNA10085.1| (hypothetical protein SOVF_147700 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 147.1 bits (370), Expect = 5.100e-32
Identity = 113/240 (47.08%), Postives = 145/240 (60.42%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYED+  I TL+QNPDIIGSSSSDNE PETGE SMI QP+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDFDICTLKQNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  QQISTELVLAIPCS------QIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQ 120
           +QIS +   A+PCS      QI+RSQRL+ E SGR+R RETGSSSQ QFHHQLESGS  Q
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSGQQ 120

Query: 121 SNHQLESGSGISGSYHLESPCTSNYSSSLPTNNMDEGF-----------------KVKEA 180
           +    ++    +     + P +  YS  L  NN    +                 +V E 
Sbjct: 121 ATQPGDNLIPPAPQLTTDFP-SETYSPYLYANNCAWHYQKLRNKYVWDRLNSLDKRVSEQ 180

Query: 181 LRSQ---LEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIERACRQLQQAPPH---GFNLS 212
             S+   L+++TK++   E    L+   + E RY  +M+E   + L++ P +   G NL+
Sbjct: 181 KHSKGRILKLETKMNNLNEFIDGLE-DDNTEFRYRISMLEDVLKSLERKPANDDTGCNLA 236

[Close]

BLAST of Spo23536.1 vs. NCBI nr
Match: gi|902183242|gb|KNA10084.1| (hypothetical protein SOVF_147700 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 133.3 bits (334), Expect = 7.600e-28
Identity = 109/240 (45.42%), Postives = 140/240 (58.33%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYED+        NPDIIGSSSSDNE PETGE SMI QP+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDF------DNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  QQISTELVLAIPCS------QIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQ 120
           +QIS +   A+PCS      QI+RSQRL+ E SGR+R RETGSSSQ QFHHQLESGS  Q
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSGQQ 120

Query: 121 SNHQLESGSGISGSYHLESPCTSNYSSSLPTNNMDEGF-----------------KVKEA 180
           +    ++    +     + P +  YS  L  NN    +                 +V E 
Sbjct: 121 ATQPGDNLIPPAPQLTTDFP-SETYSPYLYANNCAWHYQKLRNKYVWDRLNSLDKRVSEQ 180

Query: 181 LRSQ---LEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIERACRQLQQAPPH---GFNLS 212
             S+   L+++TK++   E    L+   + E RY  +M+E   + L++ P +   G NL+
Sbjct: 181 KHSKGRILKLETKMNNLNEFIDGLE-DDNTEFRYRISMLEDVLKSLERKPANDDTGCNLA 230

[Close]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_141220 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 3.200e-166
Identity = 311/317 (98.11%), Postives = 313/317 (98.74%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQSNHQLE 120
           QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQ HHQLE+GSSSQSNHQLE
Sbjct: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQIHHQLETGSSSQSNHQLE 120

Query: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQL 180
           SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQ EAEKHLQL
Sbjct: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQAEAEKHLQL 180

Query: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240
           CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY
Sbjct: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240

Query: 241 TNFTYIPVDAVDEDVVDEDEVEEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIFAS 300
           TNFTYIPVDAVDEDVVDEDE+EEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIF S
Sbjct: 241 TNFTYIPVDAVDEDVVDEDEIEEDDVVNEDVVDEDEVEEDEPAEEGGGGWKVCCCYIFVS 300

Query: 301 AFFVLVYAWIKLSMMSQ 318
           AFFVLVYAWI LSMMSQ
Sbjct: 301 AFFVLVYAWIILSMMSQ 317

[Close]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RX98_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_018830 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 5.300e-68
Identity = 169/259 (65.25%), Postives = 182/259 (70.27%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYEDE GI TLRQNPDIIGSSSS NE PE+GE S+I +PDEPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDEYGICTLRQNPDIIGSSSSYNELPESGEKSVIAEPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQSNHQLE 120
           +QIST+LVLA PC QIQRSQRLSDEGSGRKR RETGSS QSQFH            HQLE
Sbjct: 61  RQISTDLVLAAPCCQIQRSQRLSDEGSGRKRMRETGSSGQSQFH------------HQLE 120

Query: 121 SGSGISGSYHLESPCTSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQL 180
           SGSG+SGSYHLESP TSN SSSLP +NMDE           L+VQTKLHLQVEAEKHLQL
Sbjct: 121 SGSGVSGSYHLESPGTSNSSSSLPISNMDE-----------LQVQTKLHLQVEAEKHLQL 180

Query: 181 CQDAERRYMAAMIERACRQLQQAPPHGFNLSPSAPASFQYGHVSCQGQDAYSDTTSDESY 240
            QDAERRYMA M+ER C   QQA   G NL P AP             D  S+T S   Y
Sbjct: 181 RQDAERRYMAVMLERVC---QQATQPGDNLIPPAPQ---------LTTDFPSETYSPYLY 224

Query: 241 TN----FTYIPVDAVDEDV 256
           TN       + V  V+ED+
Sbjct: 241 TNNCAWHKQLNVREVEEDI 224

[Close]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUM9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146730 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.800e-44
Identity = 100/111 (90.09%), Postives = 106/111 (95.50%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDN KGKN+VDEYDQEQ+ EDESGI  LRQNPDIIG+SSSDNE PETGENSMIPQPDEPL
Sbjct: 1   MDNRKGKNEVDEYDQEQHNEDESGICNLRQNPDIIGNSSSDNELPETGENSMIPQPDEPL 60

Query: 61  QQISTELVLAIPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 112
           +QIST+LVLA+PCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS
Sbjct: 61  RQISTDLVLAVPCSQIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGS 111

[Close]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS59_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_147700 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.600e-32
Identity = 113/240 (47.08%), Postives = 145/240 (60.42%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYED+  I TL+QNPDIIGSSSSDNE PETGE SMI QP+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDFDICTLKQNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  QQISTELVLAIPCS------QIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQ 120
           +QIS +   A+PCS      QI+RSQRL+ E SGR+R RETGSSSQ QFHHQLESGS  Q
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSGQQ 120

Query: 121 SNHQLESGSGISGSYHLESPCTSNYSSSLPTNNMDEGF-----------------KVKEA 180
           +    ++    +     + P +  YS  L  NN    +                 +V E 
Sbjct: 121 ATQPGDNLIPPAPQLTTDFP-SETYSPYLYANNCAWHYQKLRNKYVWDRLNSLDKRVSEQ 180

Query: 181 LRSQ---LEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIERACRQLQQAPPH---GFNLS 212
             S+   L+++TK++   E    L+   + E RY  +M+E   + L++ P +   G NL+
Sbjct: 181 KHSKGRILKLETKMNNLNEFIDGLE-DDNTEFRYRISMLEDVLKSLERKPANDDTGCNLA 236

[Close]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS39_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_147700 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 5.300e-28
Identity = 109/240 (45.42%), Postives = 140/240 (58.33%), Query Frame = 1

		  
Query: 1   MDNGKGKNKVDEYDQEQNYEDESGISTLRQNPDIIGSSSSDNEHPETGENSMIPQPDEPL 60
           MDNGKGKNKVDEYDQEQNYED+        NPDIIGSSSSDNE PETGE SMI QP+EPL
Sbjct: 1   MDNGKGKNKVDEYDQEQNYEDDF------DNPDIIGSSSSDNELPETGEKSMIAQPNEPL 60

Query: 61  QQISTELVLAIPCS------QIQRSQRLSDEGSGRKRTRETGSSSQSQFHHQLESGSSSQ 120
           +QIS +   A+PCS      QI+RSQRL+ E SGR+R RETGSSSQ QFHHQLESGS  Q
Sbjct: 61  RQISRD--FAVPCSPRDRRIQIRRSQRLTREVSGRQRMRETGSSSQGQFHHQLESGSGQQ 120

Query: 121 SNHQLESGSGISGSYHLESPCTSNYSSSLPTNNMDEGF-----------------KVKEA 180
           +    ++    +     + P +  YS  L  NN    +                 +V E 
Sbjct: 121 ATQPGDNLIPPAPQLTTDFP-SETYSPYLYANNCAWHYQKLRNKYVWDRLNSLDKRVSEQ 180

Query: 181 LRSQ---LEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIERACRQLQQAPPH---GFNLS 212
             S+   L+++TK++   E    L+   + E RY  +M+E   + L++ P +   G NL+
Sbjct: 181 KHSKGRILKLETKMNNLNEFIDGLE-DDNTEFRYRISMLEDVLKSLERKPANDDTGCNLA 230

[Close]

BLAST of Spo23536.1 vs. ExPASy Swiss-Prot
Match: PHL3_ARATH (Protein PHR1-LIKE 3 OS=Arabidopsis thaliana GN=PHL3 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.300e-6
Identity = 25/67 (37.31%), Postives = 47/67 (70.15%), Query Frame = 1

		  
Query: 136 TSNYSSSLPTNNMDEGFKVKEALRSQLEVQTKLHLQVEAEKHLQLCQDAERRYMAAMIER 195
           +S  S  L     +E ++V EALR+Q+EVQ +LH Q+E ++ LQL  +A+ +Y+ +++E+
Sbjct: 118 SSTSSLRLAAQEQNESYQVTEALRAQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEK 177

Query: 196 ACRQLQQ 203
           AC+ +++
Sbjct: 178 ACKAIEE 184

The following BLAST results are available for this feature:

BLAST of Spo23536.1 vs. NCBI nr
BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
BLAST of Spo23536.1 vs. ExPASy Swiss-Prot
BLAST of Spo23536.1 vs. TAIR (Arabidopsis)

BLAST of Spo23536.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902186708\|gb\|KNA10768.1\|	4.6e-166	98.1	hypothetical protein SOVF_1412...	[more]
gi\|902235858\|gb\|KNA24111.1\|	7.5e-68	65.2	hypothetical protein SOVF_0188...	[more]
gi\|902183862\|gb\|KNA10191.1\|	2.6e-44	90.0	hypothetical protein SOVF_1467...	[more]
gi\|902183243\|gb\|KNA10085.1\|	5.1e-32	47.0	hypothetical protein SOVF_1477...	[more]
gi\|902183242\|gb\|KNA10084.1\|	7.6e-28	45.4	hypothetical protein SOVF_1477...	[more]

BLAST of Spo23536.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9QVN3_SPIOL	3.2e-166	98.1	Uncharacterized protein OS=Spi...	[more]
A0A0K9RX98_SPIOL	5.3e-68	65.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9QUM9_SPIOL	1.8e-44	90.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QS59_SPIOL	3.6e-32	47.0	Uncharacterized protein (Fragm...	[more]
A0A0K9QS39_SPIOL	5.3e-28	45.4	Uncharacterized protein (Fragm...	[more]

BLAST of Spo23536.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
PHL3_ARATH	6.3e-6	37.3	Protein PHR1-LIKE 3 OS=Arabido...	[more]

BLAST of Spo23536.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain	PFAM	PF14379	Myb_CC_LHEQLE	coord: 153..198 score: 6.5
None	No IPR available	PANTHER	PTHR31499	FAMILY NOT NAMED	coord: 111..200 score: 1.3
None	No IPR available	PANTHER	PTHR31499:SF9	MYB FAMILY TRANSCRIPTION FACTOR	coord: 111..200 score: 1.3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
biological_process	GO:0022414	reproductive process
biological_process	GO:0006771	riboflavin metabolic process
biological_process	GO:0015824	proline transport
biological_process	GO:0019497	hexachlorocyclohexane metabolic process
biological_process	GO:0035194	posttranscriptional gene silencing by RNA
biological_process	GO:0070918	production of small RNA involved in gene silencing by RNA
biological_process	GO:0006364	rRNA processing
biological_process	GO:0070646	protein modification by small protein removal
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006487	protein N-linked glycosylation
biological_process	GO:0006605	protein targeting
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0050793	regulation of developmental process
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0048731	system development
biological_process	GO:0006996	organelle organization
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0030036	actin cytoskeleton organization
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0006099	tricarboxylic acid cycle
biological_process	GO:0006566	threonine metabolic process
biological_process	GO:0046685	response to arsenic-containing substance
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0042744	hydrogen peroxide catabolic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0055122	response to very low light intensity stimulus
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0009987	cellular process
biological_process	GO:0006554	lysine catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0005978	glycogen biosynthetic process
biological_process	GO:0009790	embryo development
biological_process	GO:0015979	photosynthesis
biological_process	GO:0045333	cellular respiration
biological_process	GO:0006950	response to stress
biological_process	GO:0043414	macromolecule methylation
biological_process	GO:0009308	amine metabolic process
biological_process	GO:0009908	flower development
biological_process	GO:0035725	sodium ion transmembrane transport
biological_process	GO:0015721	bile acid and bile salt transport
biological_process	GO:0030154	cell differentiation
biological_process	GO:0042779	tRNA 3'-trailer cleavage
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0051641	cellular localization
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0016998	cell wall macromolecule catabolic process
biological_process	GO:0003006	developmental process involved in reproduction
biological_process	GO:0072594	establishment of protein localization to organelle
biological_process	GO:0009250	glucan biosynthetic process
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0050787	detoxification of mercury ion
biological_process	GO:0006086	acetyl-CoA biosynthetic process from pyruvate
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0042991	obsolete transcription factor import into nucleus
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process	GO:0008033	tRNA processing
biological_process	GO:0043419	urea catabolic process
biological_process	GO:0009616	virus induced gene silencing
biological_process	GO:0010048	vernalization response
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0016233	telomere capping
biological_process	GO:0010182	sugar mediated signaling pathway
biological_process	GO:0009845	seed germination
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0050826	response to freezing
biological_process	GO:0007346	regulation of mitotic cell cycle
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006457	protein folding
biological_process	GO:0019915	lipid storage
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
biological_process	GO:0009933	meristem structural organization
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0000963	mitochondrial RNA processing
biological_process	GO:0000478	endonucleolytic cleavage involved in rRNA processing
biological_process	GO:0001510	RNA methylation
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0000338	protein deneddylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0010074	maintenance of meristem identity
biological_process	GO:0000957	mitochondrial RNA catabolic process
biological_process	GO:0016571	histone methylation
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006265	DNA topological change
biological_process	GO:0006914	autophagy
biological_process	GO:0046786	viral replication complex formation and maintenance
biological_process	GO:0009408	response to heat
biological_process	GO:0008299	isoprenoid biosynthetic process
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0010564	regulation of cell cycle process
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0042138	meiotic DNA double-strand break formation
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0051026	chiasma assembly
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0009657	plastid organization
biological_process	GO:0015031	protein transport
cellular_component	GO:0015030	Cajal body
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016020	membrane
cellular_component	GO:0005732	small nucleolar ribonucleoprotein complex
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009536	plastid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031965	nuclear membrane
cellular_component	GO:0005694	chromosome
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005887	integral component of plasma membrane
cellular_component	GO:0030870	Mre11 complex
cellular_component	GO:0009501	amyloplast
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004654	polyribonucleotide nucleotidyltransferase activity
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0008568	microtubule-severing ATPase activity
molecular_function	GO:0016151	nickel cation binding
molecular_function	GO:0005488	binding
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0004518	nuclease activity
molecular_function	GO:0003917	DNA topoisomerase type I activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0044183	protein binding involved in protein folding
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0003844	1,4-alpha-glucan branching enzyme activity
molecular_function	GO:0018024	histone-lysine N-methyltransferase activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0070008	serine-type exopeptidase activity
molecular_function	GO:0048038	quinone binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0008508	bile acid:sodium symporter activity
molecular_function	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters
molecular_function	GO:0043169	cation binding
molecular_function	GO:0004148	dihydrolipoyl dehydrogenase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0015238	drug transmembrane transporter activity
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008253	5'-nucleotidase activity
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0045340	mercury ion binding
molecular_function	GO:0016152	mercury (II) reductase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0009982	pseudouridine synthase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo22525	0.75	Barchart \| Table
Spo00670	0.73	Barchart \| Table
Spo25846	0.72	Barchart \| Table
Spo23127	0.72	Barchart \| Table
Spo16884	0.72	Barchart \| Table
Spo18296	0.71	Barchart \| Table
Spo11180	0.71	Barchart \| Table
Spo03914	0.71	Barchart \| Table
Spo08335	0.70	Barchart \| Table
Spo16106	0.70	Barchart \| Table
Spo00263	0.70	Barchart \| Table
Spo14408	0.70	Barchart \| Table
Spo13509	0.70	Barchart \| Table
Spo26978	0.70	Barchart \| Table
Spo19499	0.70	Barchart \| Table
Spo27231	0.70	Barchart \| Table
Spo17085	0.70	Barchart \| Table
Spo16873	0.70	Barchart \| Table
Spo08106	0.70	Barchart \| Table
Spo08849	0.69	Barchart \| Table
Spo12143	0.69	Barchart \| Table
Spo01201	0.69	Barchart \| Table
Spo01384	0.69	Barchart \| Table
Spo26195	0.69	Barchart \| Table
Spo26008	0.69	Barchart \| Table
Spo03358	0.69	Barchart \| Table
Spo00554	0.69	Barchart \| Table
Spo22475	0.69	Barchart \| Table
Spo04988	0.69	Barchart \| Table
Spo05230	0.69	Barchart \| Table
Spo15117	0.69	Barchart \| Table
Spo08879	0.69	Barchart \| Table
Spo03057	0.68	Barchart \| Table
Spo03627	0.68	Barchart \| Table
Spo05208	0.68	Barchart \| Table
Spo06137	0.68	Barchart \| Table
Spo09493	0.68	Barchart \| Table
Spo17305	0.68	Barchart \| Table
Spo18479	0.68	Barchart \| Table
Spo19388	0.68	Barchart \| Table
Spo19776	0.68	Barchart \| Table
Spo21811	0.68	Barchart \| Table
Spo22566	0.68	Barchart \| Table
Spo24503	0.68	Barchart \| Table
Spo26452	0.68	Barchart \| Table
Spo26672	0.68	Barchart \| Table
Spo27144	0.68	Barchart \| Table
Spo27159	0.68	Barchart \| Table
Spo13780	0.67	Barchart \| Table
Spo09274	0.67	Barchart \| Table
Spo10856	0.67	Barchart \| Table
Spo21722	0.67	Barchart \| Table
Spo02271	0.67	Barchart \| Table
Spo01703	0.67	Barchart \| Table
Spo03505	0.67	Barchart \| Table
Spo25749	0.67	Barchart \| Table
Spo03053	0.67	Barchart \| Table
Spo18150	0.67	Barchart \| Table
Spo16794	0.67	Barchart \| Table
Spo00849	0.67	Barchart \| Table
Spo25476	0.67	Barchart \| Table
Spo09028	0.67	Barchart \| Table
Spo14983	0.67	Barchart \| Table
Spo09233	0.67	Barchart \| Table
Spo26727	0.67	Barchart \| Table
Spo01314	0.66	Barchart \| Table
Spo08533	0.66	Barchart \| Table
Spo16568	0.66	Barchart \| Table
Spo08105	0.66	Barchart \| Table
Spo07768	0.66	Barchart \| Table
Spo16892	0.66	Barchart \| Table
Spo06399	0.66	Barchart \| Table
Spo30025	0.66	Barchart \| Table
Spo20749	0.66	Barchart \| Table
Spo04323	0.66	Barchart \| Table
Spo23866	0.66	Barchart \| Table
Spo23898	0.66	Barchart \| Table
Spo15407	0.66	Barchart \| Table
Spo01970	0.66	Barchart \| Table
Spo11756	0.66	Barchart \| Table
Spo12610	0.66	Barchart \| Table
Spo08767	0.66	Barchart \| Table
Spo15401	0.65	Barchart \| Table
Spo21474	0.65	Barchart \| Table
Spo20889	0.65	Barchart \| Table
Spo16321	0.65	Barchart \| Table
Spo04350	0.65	Barchart \| Table
Spo08756	0.65	Barchart \| Table
Spo18907	0.65	Barchart \| Table
Spo06755	0.65	Barchart \| Table
Spo25123	0.65	Barchart \| Table
Spo26851	0.65	Barchart \| Table
Spo26728	0.65	Barchart \| Table
Spo25874	0.65	Barchart \| Table