Spo23548 (gene)

Overview
NameSpo23548
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 51257373 .. 51259221 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGTACTGTTCCATTGAAAAAGGAATCCCCTCCATTTCCATGTGGAAAGAAATCACACACTCAAGAAAGATTCAACACTTCTCTTCTTGATTGTAATGTTTACAAAGAACACTCGAAGGAGGTGAATCAGATTCGCGATGACTGGCTGAAATTTTAGCCTTGGCTGAGTTTTGTGGATCAGCTAAGAGCACAATTGGGACGGGATCATATTCTTGTACATTCAACGGGTGGAGGTAAATTAAATTAAGGTGTAAATTGGATTGGTATTCTTATTTATTACTATAGTATTCCTCTGTTTTGGGTCGAATTTTGTAGGAAATTTGAAGTAAGAGGATTTGAAAGAATAGGTATAGAGAAATGGGAAAATGTGTTATTTCCCCAGAAAAGAAATTGGGAAGAGGGTGTATGGAATAACAATTGTACAGGGTTAATAGGGGAAAAAAAGAGGACAGGATTATTTATCTAAATCATGATTTGTAATAGTTGTAGTTAGTGCCTTTAAGTTAATGATTAAGGTTGTTAAGATGGCTTAATTTCTGTGACTTTTGTTGGAAGGAAGGACGCAATTAACAATTAATTTAGAATTAACAAGGTCTTGTTTGGGGAATGGGAAATGGTGGTGGTGGGGATTCAATTTAGATGAGACTTTTACAGGTAAAGTTGGGGCATTGGATGAAGTTTGAGAATGAGATGTTTATTAAAAGCAGTGAAAGCCACTATGAAAGATTCAACTGATCAACTCTCTTTCTTTTCTTTTTTTTTTACTGTTTTTATATTTTGTATTTACTATTTACAGTTGTCACTGTTTAGTACAGTAGTATTTTACTATTTTTAATTAATTAGCTCCTGTAATAGTCAGTCCTAAAGCAGCCAAACCAAACAAGGAACAAGAAACGAGTATGTAGAGGACACCCCATTTGATTTTGACCACAACATATTTTATTTTTATATTTTTATATTTTAAAATGGGATCCCAATGACATCATTTTTGGTCATTACATGTGAATGACTCCTCTGCCCATGTGGCAGATGGCTATTTGGTAGAATCTATAGTCTGTGATCTACATGGTTAGGTCATTATGTGGGTGATCTTGGAGGGTGTATTAGTCATATTAAAATGATGTTTATAGATTTTATTAATCCGTTTGATATTGGGACTCCAATTCTATCTATATATTATTTTTAAGTATAAAATTGAAATTTTGGCATGGTAAAATGTGAAATAGGAAAGTCCACATAGTAGTGTGGTTGGGCCCACAAGGGTCAAAGTCAGTGGAACAGAGCCTAGGCCCATGCTCATTGTCTCTATTTCTCTTTCTTCCTTTTTGGACCACTTCATTCTCTTTTTCTTTTTCTTTTTCGGATGTCTTGGGGTTTCTTTAAAATATGGATACCCCTTAAAATCTTTGTAAAATTCTACTCATATCATAAGTTGCTCGTAACTAACGCAAGTCGATAGAGTTAATAGAAAACTCACCTTATGTCAATCTGGATGGTCATATAGTTGAGGTTCATCAGCTTCAAAATACTTGAAAATGAGTCAAACGTAGACCTGCATAGTTGAACTGACTTACTTGTGATGTGCTACTTGTATAAAGTATTACATTAATACATTATGAATGATATAATGTCCATTACACATGCTAATAATATCCTATTAGTTGAGTTTCCTTTGTATTAGGGTTGGGATTTGGTTCATGCCACAATTACTCTATTGTCTTATTATTCGCTTTTAAATCATTATCCGAAGGATAAATTAGGTTCTTTGCATGGTTGAATAAAACAGTATCTCCCTTTTCTTTTTTTATGTTTTTTTTTCTTTTAGCTCCTATTCAAAGCCCTAA

mRNA sequence

ATGGGTGGTACTGTTCCATTGAAAAAGGAATCCCCTCCATTTCCATGTGGAAAGAAATCACACACTCAAGAAAGATTCAACACTTCTCTTCTTGATTGTAATGTTTACAAAGAACACTCGAAGGAGGTAAAGTTGGGGCATTGGATGAAGTTTGAGAATGAGATCTCCTATTCAAAGCCCTAA

Coding sequence (CDS)

ATGGGTGGTACTGTTCCATTGAAAAAGGAATCCCCTCCATTTCCATGTGGAAAGAAATCACACACTCAAGAAAGATTCAACACTTCTCTTCTTGATTGTAATGTTTACAAAGAACACTCGAAGGAGGTAAAGTTGGGGCATTGGATGAAGTTTGAGAATGAGATCTCCTATTCAAAGCCCTAA

Protein sequence

MGGTVPLKKESPPFPCGKKSHTQERFNTSLLDCNVYKEHSKEVKLGHWMKFENEISYSKP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23548.1Spo23548.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23548.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23548.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23548.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23548.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042221 response to chemical
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0019745 pentacyclic triterpenoid biosynthetic process
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0008289 lipid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0015078 proton transmembrane transporter activity
RNA-Seq Expression