Spo23577 (gene)

Overview
NameSpo23577
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein
Locationchr2 : 51684182 .. 51688342 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATAATTATTTTTTCCGTTTCACTTTAATTTTTATCGGAGGTCGGTCGGATCGGGTCAGTTTTTGACAACCCTTGTCCACCCACAACCACCCTACCCAAAAGCTAAAAAAAACAACATTAATTGATTTAAGCCCACCAAAAAAAAAAAAAAAAAAAGCATTGGCCCAAATACAAATTAAACCCAAAAAAACAGAAAAGAATTCAAGCAATATTAGCAATTGAGAATTGGAAAGTTGGGAGAGAGAAGAAGACTGAAGAAAACAAGTTATTTCTCATTTCCATTCTTTTCGATTTTACACTTGAGCTCCTCTGCAACACTTGAAGAATTCTCTGCTAAAACCTCCTCGAAAACTGTGAAAATTTTCAAAAATGGAGGAAGTAAGATCGGCAATGGAGGATCACATGAATCAAATGGCGGATCTTGTTCAAAAGTTGTCCGATGAGCTTCGTTCTGGTTTCGCACCTGCTTACGATAATTTCATGGGTTTCTTCCACGCCATTGATTGGAAGGTCTCCCTCTCTTCTCTATCTCCATCTTTATCTCTCTTCAATTGCGTTGAATTTACTGTAAATTGTTGTATTGCTGATGATGAGTAACTCGATTGATTTTAGGTTCATTTTGTTTATTTGATTTGTTACTTGATTCGGCTTTATATTGGTTAAGTACAACCTAAGATCTGGAATTTACATCTGATTTATTTTTTGGAAATTACAAATTGTTGATACTAATTGCAGCTTGAAATTGGGAGGAGAAATTTGGGTATTATGGTAGTTAATTGATTGTTGTGGGTTGATAAGGAGAAGATGGTAGCTTAGGAGCTGACTATCTAGTGTTTGCAATGTTGCCAATGAGGCAATGGTGTTGTTTATTTTGGCTAATTAGTGCTGCCAATTCCGATCTTTCTCAACATGCTATGTAGTATTAAGCAAGGACTCGAAAACCGCTTTCTTTTTTTGTTGTTTGAAGGTCTCACACTCTCACTAGATGTTTCAGGGGGGTAATTCAACCTAAGATCTGGAATTTACACCGGATTTTTTTTTTCAATTACAAATTATTGATACTAATTGCAGCTCGAAATTGGGAAGAGAAATTTGGGTATTAGGGTAGTTGATTGATTGTTGTGGGTTGATAAGGAGAATAGGGTAGTTCAGAAGCTGTCTATCTAGTGTTGCTACAGTTTCAAATGAAGCAACAGTGTTGGTTATTGTGGCTAATCATTGATTCCAATGTCACAAACCCTTCTCAACACATGCTCTGTAGACATGTATTGAGCTGTCTATCAACTATCAAGTGTTACGGTCATTGTACTACTGATGATTTAGTAGACATGATGGGATAATTCGATTGATTTTAGGTTCATTTTGTTATTGGATTTGTTACTTGATTCACCTTTATTCTGGTCATATACACCCTCAGATCTGGAACTTTTATTATGCTTGTTATCGTATGTCTGGTTCTTTTTCTTCTCAATTACAAATTGTTGGATGATAATGCAACTTGAGATTGGGAGGAGAAAGTTTGAGTTTATGGTAGTAAGGAGTAGGGAGAAGATGGGTTGGAGGAGAGAAAAGGAGAGGTAAGGAGTAGGGAGGGAAATGTGACACAACTTTTCTTACAAAAGGAAAATGTTTTTCACCATTGAAGAGCTATTTTCTACATTCAAATTGTTTTCCGCCCCTTGATAAACCAAACAAGGAAAACAAGAAAATCATTTTTTGGAATTTTCCAAATAGATCCTTACACTTTGTTCGCATAGCACGATAGAAGGGAAAAGAAGAGGAGGGATGGAAGGGGGAAGGTGGAGCTCCATTTTCCCTCCAATTCTCTCCAATTTTGAAGGGATGTTTGTTTATTAAAAAGGAGGGCAAATGAATCTCAATCTCTCCCTTCCCTTCCTTCCCCCTCCTCCCCCCAACCCCTTATCCAAACAAGGGATTTTTTGCTCCCCTTCAATTTGTTCTTGGTAGTTGATAATTTATGGTTGTGTTTACTGCCGATATTTTTGGAAATTGTACTGTGTTAATGCAAATTGAGAAGTAAGAGAGTTGTGTTGCTCAGTTGGCCAACTATGTTTTATCATGTGTAATATGGTCTGCAGAAACCTTATTAGCTTAGGTGTTATTCTCTTCTTTATCTAGCTGCAATCCTTGCATGTTCTACATGGTCTTTCTCATCTTACTTTCTTGTCCATAACTAAAAACACTGCAAAGCTCCTTGTCTGTTACCAAGTTTATGAAACCTAGTGAATTTAATAACTTCTCTGCATTTGCTTGCTTCTTTATTATATGTTTTTAAGGAATCATTCTATTGTCCTCTTACCTCAGTTGTACTAGTGTTTTCCATCTAATGTTTTAGCTTGATTTTTCTCATCTCCTCTTTTCAATTTTTCTTTTTGTTGTTCATGATTTGTATGACATATGCAGGAGCCATGGTTGATGGGCATATTGGGATTCTACGTATTTCTGTTGCTGACAATTATCTTCTCCAGGAAGCATGTCAACTTCCAAATGTGTCTATTTCTTCTTGCTTGTACGTTTCCTGCTCTCTGATTGCAGTAATTTTTTGTTGTCACAATAACAGAAAAAAAATTATCTGTTGTCACAAACAGTAAATTGTTTTACCTGTTTGGAAAAAAAAAAAATCTGTTGTCACAAACAGTAAATTGTTTTACCTGTTTGGAAAAAAAAATATGCATGATTCTTTTCAATTTTAGCTCATGAGCCATTGCACCTGTTTTTCCTTTTTGCTTTTGCTATTGAAGGAGGGGAGAAATGGTAGATTGGGCTGATTAGATGTGGGCAAAGGGGGCTAAAAAGAATTGAAGATGCAATTTTATTTTTATTTTTTTTGTCATCGTTCTAAGACCATTTTTGGATGATATTTGTGTAAAAAGTAGGTTTTTATTGTAAGTGACCACGATGCATTTTCTCCCCTGCTATGATGTCATTGCTTATGTAAATAAAAAACTAGCTTCATATTGGATTTCAGGCAGATTTTGAGATATAAAGTACTACGTACTATAAAGTATTGTATATGTGCTCTGTCTAACGTTAAGGCATTATGCTGCAGTGTCTGGTGTATATCTTGCTGAAAGACTGAACCGGTTTCTTGGTACTCACTGGGAAAGTTTTGCTACTCAGAACTATTTTGACCCACATGGACTTTTCCTCTCTGTAGTATGGTCTGGTCCGCTTCTCGTAATTGCAATGCTAATCTTGGTTAGTATCTATCCTTAATCCTTTGTTTCTAGCTTTTCCTAAAGATGGCCGTGGGCTGGGCAGGGCTTCTGGCCGAGCCCACAGGCCATGGGTCTAAACGGGCCAGGTCGGCCGAAAAGGTTCAAAACAGGGCCCAGGCCCATGTGTTGTCGTGCCGGGCTGGGCCTTCATGCCTAAGCCTAATTTTACTAAATTCAACGTGCTTTGTCGAGTCGTGCTTTTTCCAAAAAAATGCGGCTCAGACCCAGCAGACGGCTCACGACTACGTGCTCATGTTGGGTCGTGTTTTTTTCGTGCCCATGCCGGGCCAGGCTTTTCGTATCGGGTCGGCCCGGCCCACAACCATTTTTATTGCCTTTCCCCCCAGTTTAACGCATGAATCATTGATAACATAAGCTACATTTGCCTTTTCTTCTCCTCAACTACAGATAAACACCCTCTTCTCATTGTGCCATTTGATTGTTCGATGGAAAAGGGCTGAGCTTAGACACCGTGCAAAACTTGAGAAGAAGGAGAATTAAATTTGTTGTTAATTAGCAGAGGTTGGTCTGTCAAAAAAGGCGTAGCATGCTTAGTGCAAGGTGTATGATTTCTGCTGCATGGTCTTCAATGGTTCATCTTGTTCGAGGCTCAGTGTAGGGTGAGTTACTAGCGTTGGACTTGTAAGTCATGGTTTTGCAGCGCATCCAATTTTCGTGGTATAACAACAGAGTTCAACAACATTCTTAGAGTATACTTTTTTGCAATTAGTTTGTACTTTGTAAGCTAAAAAAATGGTTATGAACTTATGATACACTTCTAAGCTTTTTTTTTTCAATTAGTTTTTTTTTTAATCTGTACAACAATTCAGACATTGTTCTTGATTTATTATACTGAATAAGAGTTCCTTCTACTCAAAAAATTGCTAATTATAAATTGCATTCCAGTTTAGTGATCCAAAC

mRNA sequence

TCATAATTATTTTTTCCGTTTCACTTTAATTTTTATCGGAGGTCGGTCGGATCGGGTCAGTTTTTGACAACCCTTGTCCACCCACAACCACCCTACCCAAAAGCTAAAAAAAACAACATTAATTGATTTAAGCCCACCAAAAAAAAAAAAAAAAAAAGCATTGGCCCAAATACAAATTAAACCCAAAAAAACAGAAAAGAATTCAAGCAATATTAGCAATTGAGAATTGGAAAGTTGGGAGAGAGAAGAAGACTGAAGAAAACAAGTTATTTCTCATTTCCATTCTTTTCGATTTTACACTTGAGCTCCTCTGCAACACTTGAAGAATTCTCTGCTAAAACCTCCTCGAAAACTGTGAAAATTTTCAAAAATGGAGGAAGTAAGATCGGCAATGGAGGATCACATGAATCAAATGGCGGATCTTGTTCAAAAGTTGTCCGATGAGCTTCGTTCTGGTTTCGCACCTGCTTACGATAATTTCATGGGTTTCTTCCACGCCATTGATTGGAAGGAGCCATGGTTGATGGGCATATTGGGATTCTACGTATTTCTGTTGCTGACAATTATCTTCTCCAGGAAGCATGTCAACTTCCAAATGTGTCTATTTCTTCTTGCTTTGTCTGGTGTATATCTTGCTGAAAGACTGAACCGGTTTCTTGGTACTCACTGGGAAAGTTTTGCTACTCAGAACTATTTTGACCCACATGGACTTTTCCTCTCTGTAGTATGGTCTGGTCCGCTTCTCGTAATTGCAATGCTAATCTTGATAAACACCCTCTTCTCATTGTGCCATTTGATTGTTCGATGGAAAAGGGCTGAGCTTAGACACCGTGCAAAACTTGAGAAGAAGGAGAATTAAATTTGTTGTTAATTAGCAGAGGTTGGTCTGTCAAAAAAGGCGTAGCATGCTTAGTGCAAGGTGTATGATTTCTGCTGCATGGTCTTCAATGGTTCATCTTGTTCGAGGCTCAGTGTAGGGTGAGTTACTAGCGTTGGACTTGTAAGTCATGGTTTTGCAGCGCATCCAATTTTCGTGGTATAACAACAGAGTTCAACAACATTCTTAGAGTATACTTTTTTGCAATTAGTTTGTACTTTGTAAGCTAAAAAAATGGTTATGAACTTATGATACACTTCTAAGCTTTTTTTTTTCAATTAGTTTTTTTTTTAATCTGTACAACAATTCAGACATTGTTCTTGATTTATTATACTGAATAAGAGTTCCTTCTACTCAAAAAATTGCTAATTATAAATTGCATTCCAGTTTAGTGATCCAAAC

Coding sequence (CDS)

ATGGAGGAAGTAAGATCGGCAATGGAGGATCACATGAATCAAATGGCGGATCTTGTTCAAAAGTTGTCCGATGAGCTTCGTTCTGGTTTCGCACCTGCTTACGATAATTTCATGGGTTTCTTCCACGCCATTGATTGGAAGGAGCCATGGTTGATGGGCATATTGGGATTCTACGTATTTCTGTTGCTGACAATTATCTTCTCCAGGAAGCATGTCAACTTCCAAATGTGTCTATTTCTTCTTGCTTTGTCTGGTGTATATCTTGCTGAAAGACTGAACCGGTTTCTTGGTACTCACTGGGAAAGTTTTGCTACTCAGAACTATTTTGACCCACATGGACTTTTCCTCTCTGTAGTATGGTCTGGTCCGCTTCTCGTAATTGCAATGCTAATCTTGATAAACACCCTCTTCTCATTGTGCCATTTGATTGTTCGATGGAAAAGGGCTGAGCTTAGACACCGTGCAAAACTTGAGAAGAAGGAGAATTAA

Protein sequence

MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23577.1Spo23577.1mRNA


Homology
[Close]
BLAST of Spo23577.1 vs. NCBI nr
Match: gi|902203800|gb|KNA14688.1| (hypothetical protein SOVF_104420 [Spinacia oleracea])

HSP 1 Score: 326.2 bits (835), Expect = 3.100e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF
Sbjct: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW
Sbjct: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN
Sbjct: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 162
[Close]
BLAST of Spo23577.1 vs. NCBI nr
Match: gi|731310775|ref|XP_010675640.1| (PREDICTED: transmembrane protein 18 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 287.7 bits (735), Expect = 1.200e-74
Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVR AME H+NQMADL+QKLS E RSG  PAYDNFMGFFHAIDWKEPWLMG+LGFYV 
Sbjct: 1   MEEVRLAMEQHLNQMADLIQKLSSEFRSGMGPAYDNFMGFFHAIDWKEPWLMGLLGFYVL 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLLTII SR+H+NFQMCLFLLALSGVYLAERLN+ LG HW+SFATQNYFDPHG+FLSV+W
Sbjct: 61  LLLTIILSRRHLNFQMCLFLLALSGVYLAERLNKLLGVHWQSFATQNYFDPHGVFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLL+IAMLILINTLFSLC+LIV+WKRAELRHRA+LEKK N
Sbjct: 121 SGPLLIIAMLILINTLFSLCNLIVQWKRAELRHRARLEKKAN 162
[Close]
BLAST of Spo23577.1 vs. NCBI nr
Match: gi|731360933|ref|XP_010692085.1| (PREDICTED: transmembrane protein 18-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 270.4 bits (690), Expect = 2.000e-69
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVR  ME H+NQMADL+QK S E RSG  PAYDNF+GFFHAIDWKEPWLMGILGFY  
Sbjct: 1   MEEVRLLMEQHLNQMADLIQKFSSEFRSGMGPAYDNFIGFFHAIDWKEPWLMGILGFYAL 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLL  I S+ HVNFQMCLFLLALSGVYLAERLNRFLG  W+ FATQNYFDPHG+FLSV+W
Sbjct: 61  LLLVTIISKSHVNFQMCLFLLALSGVYLAERLNRFLGNQWQFFATQNYFDPHGIFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLL+IA+LILINTLFS+CHLI++WKRAELRHRA+L +K++
Sbjct: 121 SGPLLLIAILILINTLFSMCHLIIQWKRAELRHRARLSQKKD 162
[Close]
BLAST of Spo23577.1 vs. NCBI nr
Match: gi|1009137991|ref|XP_015886348.1| (PREDICTED: transmembrane protein 18 [Ziziphus jujuba])

HSP 1 Score: 258.1 bits (658), Expect = 1.000e-65
Identity = 123/161 (76.40%), Postives = 144/161 (89.44%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEE+RSAM+DH+NQMADLVQK SDELRSG  PAY+NFMGFFHAIDW EPWL+G++GFYV 
Sbjct: 1   MEELRSAMDDHLNQMADLVQKFSDELRSGLRPAYENFMGFFHAIDWTEPWLIGLMGFYVV 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLL    SRK++NFQMCLF LAL GVY AERLNR L  +W+SFA+QNYFDP+GLFLSV+W
Sbjct: 61  LLLITFSSRKNINFQMCLFFLALGGVYFAERLNRLLSENWKSFASQNYFDPNGLFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKE 162
           SGPLLVIA++ILINTLFSLC+LIVRWK+AELRHRA+L + +
Sbjct: 121 SGPLLVIAIIILINTLFSLCYLIVRWKKAELRHRARLARNK 161
[Close]
BLAST of Spo23577.1 vs. NCBI nr
Match: gi|255571806|ref|XP_002526846.1| (PREDICTED: transmembrane protein 18 [Ricinus communis])

HSP 1 Score: 256.5 bits (654), Expect = 3.100e-65
Identity = 123/157 (78.34%), Postives = 139/157 (88.54%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           M+E+RSA EDH  QMADLVQKLS ELRSG  PAYDNF+GFFHAIDW EPWLMG++ F+V 
Sbjct: 1   MDELRSAFEDHFEQMADLVQKLSSELRSGLRPAYDNFIGFFHAIDWTEPWLMGLIAFHVM 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLL  I SRKHVNFQMCLFLLAL GVY AERLN+ LG +W+SFA+QNYFDP GLFLS +W
Sbjct: 61  LLLLAIISRKHVNFQMCLFLLALGGVYFAERLNKVLGDNWKSFASQNYFDPQGLFLSALW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKL 158
           SGPLL+IA++ILINTLFSLC+LIVRWKRAELRHRA+L
Sbjct: 121 SGPLLIIAIIILINTLFSLCYLIVRWKRAELRHRARL 157
[Close]
BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5A6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104420 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 2.200e-86
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF
Sbjct: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW
Sbjct: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN
Sbjct: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 162
[Close]
BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6T9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000780 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 8.600e-75
Identity = 138/162 (85.19%), Postives = 151/162 (93.21%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVR AME H+NQMADL+QKLS E RSG  PAYDNFMGFFHAIDWKEPWLMG+LGFYV 
Sbjct: 1   MEEVRLAMEQHLNQMADLIQKLSSEFRSGMGPAYDNFMGFFHAIDWKEPWLMGLLGFYVL 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLLTII SR+H+NFQMCLFLLALSGVYLAERLN+ LG HW+SFATQNYFDPHG+FLSV+W
Sbjct: 61  LLLTIILSRRHLNFQMCLFLLALSGVYLAERLNKLLGVHWQSFATQNYFDPHGVFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLL+IAMLILINTLFSLC+LIV+WKRAELRHRA+LEKK N
Sbjct: 121 SGPLLIIAMLILINTLFSLCNLIVQWKRAELRHRARLEKKAN 162
[Close]
BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BF07_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018030 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.400e-69
Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEEVR  ME H+NQMADL+QK S E RSG  PAYDNF+GFFHAIDWKEPWLMGILGFY  
Sbjct: 1   MEEVRLLMEQHLNQMADLIQKFSSEFRSGMGPAYDNFIGFFHAIDWKEPWLMGILGFYAL 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLL  I S+ HVNFQMCLFLLALSGVYLAERLNRFLG  W+ FATQNYFDPHG+FLSV+W
Sbjct: 61  LLLVTIISKSHVNFQMCLFLLALSGVYLAERLNRFLGNQWQFFATQNYFDPHGIFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLL+IA+LILINTLFS+CHLI++WKRAELRHRA+L +K++
Sbjct: 121 SGPLLLIAILILINTLFSMCHLIIQWKRAELRHRARLSQKKD 162
[Close]
BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Match: B9SLH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0686940 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.100e-65
Identity = 123/157 (78.34%), Postives = 139/157 (88.54%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           M+E+RSA EDH  QMADLVQKLS ELRSG  PAYDNF+GFFHAIDW EPWLMG++ F+V 
Sbjct: 1   MDELRSAFEDHFEQMADLVQKLSSELRSGLRPAYDNFIGFFHAIDWTEPWLMGLIAFHVM 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LLL  I SRKHVNFQMCLFLLAL GVY AERLN+ LG +W+SFA+QNYFDP GLFLS +W
Sbjct: 61  LLLLAIISRKHVNFQMCLFLLALGGVYFAERLNKVLGDNWKSFASQNYFDPQGLFLSALW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKL 158
           SGPLL+IA++ILINTLFSLC+LIVRWKRAELRHRA+L
Sbjct: 121 SGPLLIIAIIILINTLFSLCYLIVRWKRAELRHRARL 157
[Close]
BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Match: B9IQK9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11530g PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.200e-65
Identity = 119/162 (73.46%), Postives = 145/162 (89.51%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEE++SAME H++ MADLVQKLS ELRSG  PA DNF+GFFHAIDW EPWLMG++GF++ 
Sbjct: 1   MEELKSAMEAHLDMMADLVQKLSSELRSGLRPAIDNFIGFFHAIDWTEPWLMGLIGFHLV 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFATQNYFDPHGLFLSVVW 120
           LL+  + SRKH+NFQMCLFL+AL+GVYLAERLNR +G +W SFA+QNYFDPHGLFLSV+W
Sbjct: 61  LLVLTVVSRKHINFQMCLFLVALAGVYLAERLNRVMGDYWRSFASQNYFDPHGLFLSVLW 120

Query: 121 SGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKEN 163
           SGPLL+IA +ILIN+LFSLC++IVRWKRAELRHRA+L ++ N
Sbjct: 121 SGPLLIIATIILINSLFSLCYMIVRWKRAELRHRARLARESN 162
[Close]
BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Match: TMM18_CHICK (Transmembrane protein 18 OS=Gallus gallus GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.500e-16
Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 1 

		  

Query: 45  DWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFA 104
           DW EPWL+G+ GF+V   L   FS +H   Q+  FL  +  VY AE +N     +W  F+
Sbjct: 26  DWAEPWLLGLAGFHVLCFLLTCFSFQHYRVQIGHFLCMVCLVYCAEYINELAAMNWRLFS 85

Query: 105 TQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKE 162
              YFD  G+F+S+V+S PLLV  ++I++N ++   +++   K  + R +A+ +KK+
Sbjct: 86  KYQYFDSRGMFISLVFSAPLLVNTIIIVVNWVYRTLNVMTELKTLQQRIKAEKDKKK 142
[Close]
BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Match: TMM18_DANRE (Transmembrane protein 18 OS=Danio rerio GN=tmem18 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.000e-15
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1 

		  

Query: 40  FFHAIDWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTH 99
           F  ++DW EPWLM +L F+VF     + S K+   Q+C FLL ++ VY AE LN     +
Sbjct: 28  FLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLNELAAMN 87

Query: 100 WESFATQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLE 159
           W SF+   YFD  G+F+S+V+S PLL+  ++I+   ++     +   K  +L+ +A  E
Sbjct: 88  WRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKRKAARE 146
[Close]
BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Match: TMM18_XENTR (Transmembrane protein 18 OS=Xenopus tropicalis GN=tmem18 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.200e-15
Identity = 41/118 (34.75%), Postives = 69/118 (58.47%), Query Frame = 1 

		  

Query: 44  IDWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESF 103
           IDWKEPWL+G+  F++  L+    S K    Q+C FLL +  V  AE +N F   HW S+
Sbjct: 16  IDWKEPWLIGLAVFHILCLIVTYVSFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRSY 75

Query: 104 ATQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKE 162
           + Q YFD  G+F+S+ +S PLL   ++I+++ ++    ++   K  + + +   EK++
Sbjct: 76  SKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRK 133
[Close]
BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Match: TMM18_XENLA (Transmembrane protein 18 OS=Xenopus laevis GN=tmem18 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.500e-14
Identity = 38/118 (32.20%), Postives = 67/118 (56.78%), Query Frame = 1 

		  

Query: 44  IDWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESF 103
           IDW EPWL+G+  F++   +    S K    Q+C FLL +  V  AE +N F   HW ++
Sbjct: 16  IDWTEPWLIGLAAFHILCFIVTYISFKSYPLQICHFLLMVVLVSCAEYINEFAAMHWRAY 75

Query: 104 ATQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKE 162
           + Q YFD  G+F+S+ +S PLL   ++I+++ ++    ++   K  + + +   EK++
Sbjct: 76  SKQQYFDSSGMFISLAFSAPLLCNTIIIVVHWVYKTLCVMTELKTLQQKRKESREKRK 133
[Close]
BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Match: TMM18_HUMAN (Transmembrane protein 18 OS=Homo sapiens GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.700e-13
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 1 

		  

Query: 45  DWKEPWLMGILGFYVFLLLTIIFSRKHVNFQMCLFLLALSGVYLAERLNRFLGTHWESFA 104
           DW EPWLMG+  F+   +L    S +    Q+  FL  +  VY AE +N     +W  F+
Sbjct: 22  DWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFS 81

Query: 105 TQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRAKLEKKE 162
              YFD  G+F+S+V+S PLLV AM+I++  ++   +++   K A+ R + K  +++
Sbjct: 82  KYQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRK 138
[Close]
BLAST of Spo23577.1 vs. TAIR (Arabidopsis)
Match: AT1G34350.2 (unknown protein)

HSP 1 Score: 220.3 bits (560), Expect = 8.600e-58
Identity = 111/182 (60.99%), Postives = 137/182 (75.27%), Query Frame = 1 

		  

Query: 1   MEEVRSAMEDHMNQMADLVQKLSDELRSGFAPAYDNFMGFFHAIDWKEPWLMGILGFYVF 60
           MEE+RSAME  ++ +ADLV+KLS ELR+GF PAYDNF+GFFHAIDWKEPW+MG++ F+  
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLLTIIFSRKHVNFQMCLFLLA-------------------------LSGVYLAERLNRF 120
           LLL  + SR+H+NF M LFLLA                         ++GVY AE LNR 
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLACKFPLKLSIYILYKKSLRSNDLTSLVAGVYFAENLNRE 120

Query: 121 LGTHWESFATQNYFDPHGLFLSVVWSGPLLVIAMLILINTLFSLCHLIVRWKRAELRHRA 158
           L  +W+SF+TQNYFD +G+FLS +WSGPLLVIAM+ILINTLFSLC+LIV+WKRAELRHRA
Sbjct: 121 LRKNWKSFSTQNYFDSNGVFLSTLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRA 180
The following BLAST results are available for this feature:
BLAST of Spo23577.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902203800|gb|KNA14688.1|3.1e-86100.hypothetical protein SOVF_1044... [more]
gi|731310775|ref|XP_010675640.1|1.2e-7485.1PREDICTED: transmembrane prote... [more]
gi|731360933|ref|XP_010692085.1|2.0e-6979.0PREDICTED: transmembrane prote... [more]
gi|1009137991|ref|XP_015886348.1|1.0e-6576.4PREDICTED: transmembrane prote... [more]
gi|255571806|ref|XP_002526846.1|3.1e-6578.3PREDICTED: transmembrane prote... [more]
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BLAST of Spo23577.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R5A6_SPIOL2.2e-86100.Uncharacterized protein OS=Spi... [more]
A0A0J8D6T9_BETVU8.6e-7585.1Uncharacterized protein OS=Bet... [more]
A0A0J8BF07_BETVU1.4e-6979.0Uncharacterized protein OS=Bet... [more]
B9SLH7_RICCO2.1e-6578.3Putative uncharacterized prote... [more]
B9IQK9_POPTR6.2e-6573.4Uncharacterized protein OS=Pop... [more]
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BLAST of Spo23577.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
TMM18_CHICK4.5e-1636.7Transmembrane protein 18 OS=Ga... [more]
TMM18_DANRE1.0e-1536.9Transmembrane protein 18 OS=Da... [more]
TMM18_XENTR2.2e-1534.7Transmembrane protein 18 OS=Xe... [more]
TMM18_XENLA2.5e-1432.2Transmembrane protein 18 OS=Xe... [more]
TMM18_HUMAN2.7e-1334.1Transmembrane protein 18 OS=Ho... [more]
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BLAST of Spo23577.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G34350.28.6e-5860.9unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 38..156
score: 5.4
NoneNo IPR availableunknownCoilCoilcoord: 1..21
scor
NoneNo IPR availablePANTHERPTHR22593FAMILY NOT NAMEDcoord: 1..162
score: 9.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008643 carbohydrate transport
biological_process GO:0006486 protein glycosylation
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0030658 transport vesicle membrane
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0005797 Golgi medial cisterna
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005789 endoplasmic reticulum membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0005515 protein binding
RNA-Seq Expression