Spo23645 (gene)

Overview
NameSpo23645
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionAGAMOUS-like 16
Locationchr2 : 51958670 .. 51962473 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGATACCTGACTCCGGTGGAGGGAAGGAAGCCGGAAGGAAACGAGTCGAATGAAGCCGTCACTGACGAAATTTGGGGGTGAAAATTTAATTGTTATTTGTTTTTGGGCCTAATAGCCTAAATTTCTAAACTCAACGCATGAAAATTTCCAATAACCCAAATTTCGTATGGGTCGTATCCACATAGAACGACGTGTATTGCGTATCCAAATTTTATAAGTTTTGGATACTCCAAAAACAGTATCGGACACTTTTATTTAAGGTAAACAGGGACGAATATCTAAAGACGAATTTTTGGAAAACATTTAATTAATTAAATTTTTTGTTCATGCTCCATTTTCTTTATCCCAATTTCAGAGTAAAATTGTGCATAAAATTTAAGCACATAAAATTATAAACCCAAACGGATTACTATCAACGGGCGTATAAAATTTCCATAATCCACAACTATGGAATTCCGCCAAATCAACAATTGACTTCTTTTCTATATTTCCGTAATCTTCATCAACTTATAATAATGTTCATTTCACAATTATAATGTAAAAGTTTACAGGTTAGATTTTATTAATGCAACTACACAATCTAAGATTCTAGTTAAACTATCGTTTCACTATGATTTTATTATGCACAATTCAAAACCCATATCACGTTTTCGAGATAAATTGTCAATTTTGAATATTTGAGTAGAAAATTAGAGGAAGAATAACAAAGAAAATAAAAATAAAGAACTAAAAACGTTACCCAGTGAAGAGGAAGCGGTACAGCAGAGGAGCAACGCACAATTTGGGAGAGACAGAGAGTGTCTGATTATTGAGAAAAGAGATACTGAGACAGTGACTGGTAAAATCCACGAAGTTAGCAAATTTAGGGTAAGAAAGTGATGGTAACTTTGGGCTTGGCTAATGAGGCACTCTTTTCTCCTTTTAAATTTCTATTTTTATTTTTTATTTTTTATGATAATAAATTTTGACTTTTCTAAAATGTCAGATTATTAGACTATTTTATAATTTTAATTTTTAAAAGAACTTATTTCGGGTTATGCAACCTGATTTTGACCCATATAAATAATCGGGTTACAAGGTTGGTTTAGGGTTGAGATTTCCAACCTTAACCTAACCCATTTAAGTTCAGGTGGGTTCATGTTGACCCATATAATTAACCGGGTTGAAAATTTCAACCCCAACCCGCTATTTTCGGGTCGTGCTATAAAGTCGGGTCAGATTTTGCCAGCCGTAATCATAGCACAAACAATCCCCCCAGTAGGATTTACAGTGGAAAAGGATTTCAAAGACTCACCCTTCAGTAGGCAAACATATGAAACATCCAGATGTTATGATAAAGATGTGCTGTTATTCTGTCCGTAGCTCGTAAAATTTGTTTCAACACACTCATTGAAACTCTGTAATCAGTCTGCTACTTCAGGAAGCTGTGTTGAATGTCATTGTGAAGGAAAGCTTCTTAGCTGGTTCATTCTTATGGAACTTAGTTGCGTCATTTTATCAGAACTATAGCTGCTATTGCATCAGTTATGACAGGTACCTACACCGAAGACAAGTATAGATAGTAAGTCAATATAATCACTAATCAGTGTATCAGATCACTATAAGACAGCTTTTAACACCAGCTTGTAATGTAATTGCAATTAGTTGTTCCGATGTTTTCTAATGTCGCCATTTTAAAGAGTTTCAAAGTCCGCAACATATCTAACAACTGAAAATAAAGGAACCTGGAATCACATTACTTCTGTGTTTGCAGTTTGAAATCAGTAATTGAACGATACAAGAAGACAAAAGAGGAGCATCAACAGCTTGCAAATCCGAACTCTGAGGCCAAGGTATGATTCAGAACCTAAACTCAATAAATCTACAATTTCTCATTGATGTTATTATCTATGGTGAACAATCATGATTTAAATAAATGGCTGAGGTGGTAGACAACTTTGTGATGGCTAAAGAGAAGCAGGAAATCCTAGGTTTTGGAATCATAGTAGATCTCTTCTCACTTGTTTTACACATTTTCACATGTAGTAATATACTTAAAACTGCTGAGGTGTAGAATCCATTAAGCACACTAGTAATATCAGAAATATTAGGCACAGAAAAAGGCCTCTAAAAAATAACAATAACCAGTGTTATCAGAATACTAACATCACATAAAGCTTTAGTTTTCTGTGCTAAATCTACACTCTAGCTTCTACAATGTACTGAAAAGAATCTACAAAGCATATAAGTGTTATGAAATATCTACAACAGAATCATGATAGGCCTTTCTACATATTAACGTGGTCACGATACTAAAAATTGCTAATTACAAGCTAGGCCTATGTCTATCTTGACAGGAAAGCTCAAAATTTCTAAAGAGCAATGTTTAAAACAATATTTTTACCACTCTACTACTGTGTCCTCCCAAATCCTCAAAATCACAAATTTCCCTCCTGCTCTTCATACACCTTGATCTTATGAAAAGGGTCTATTCCTCGCCTCCTACCAAGCTCTTATGACAAATAAATCAGATACAACAGCCTAATACATGGTACCTGGATAATCAACCTTTTGGCTCTAATTTAGGAATAACATATCCAAATTACAAACACCAGTATCCTTGAACTCAGCTATCATCCCATAAGATGAAAACTTCAAATTGAGTCACTGTTCATCACAAACTTCCAACTAAAAAAGAACCATATAGGTTAGAAGCAACTATATACATACCTTGTACCAAAAGAGACAAAGGCATTAGTCATCTATCAGGTGCACATTGAAGAAGCAAAACAAGCAAAGGAATGGAGTGGACATTCTGAAGATTGAAGACCCCAAATTCTAGAATTCATTTCTGCGCCAATATCGAGCACTGTTTGGAAAACAAGTCAGAGTGCTTTAGAGCTTCCGTATACTTCACAGGCAACTGATGCCAGAGACAAACTCAATTAAAGGAGAGAAACATTTGTTTTTTATACAAGGAAGAATGGTTTCAACTTTTTGGACAATTCTCTTTATATAAGGAGCATGAATCCCTCTGAACTACTACAACATCCTAGTAAGGACCAAGTGCCTTCCCAAGTTGTCCAGACTGGTTTGAGAAAGAGAAATCTGGCACAGGATACATTGGAGCCAGACAGTCTGGTTGGCTCGCGTGTTTTTCTACATTACGAGTTGACAGCTCATCCCTAAAGGAGACTTTTTGCGGTTCATGAAGAGGATTGGGTTAGTTTTTATAAAATATTAGAGATTGGTTTCAAATTCATTTTTCCAGGTATATTAGAGATTGGTTTCAAATTCATTTTGCCGGGTATGGAAGGGTGAAGGCGAAAAGGTTGTTGTGGAAAAAATGCTTTCATGGGTATCTGGTGGACCACTTGGCTAAAACGAAATGGTAGAATCTTCAATGGAGTTGCATTTTCCCATGATAGTTATGAAACCTAAAAGCCCACTGCCTTTGCCCCAGAGGCTAACAAAGTTTCCCCTAAAAGACACCTTGTCCTTTTCCTGTTTTCTTCTCCGACAGTTACAAAAAATCTTTTCAAAAAATCCTCATACAACCACCAAATGCAAACATTAAGAACTCAAATGATATGCATATGGTCTTGTCTGGTGCCCTAAAATCTACGCTTTTCTGGAAAGGGAAGTTGGAACTGGATATTTCCAGAAATGATGCGTGGTCTGGATTGGGAAACACAGAAGATTACAAAAAGCTATCAAACACCTGAAGTCCCAAATTGCAAAAAGTCAATCAATGTAATGAACCATGCACAACTTACTCCAGTTGAATGGAAAAACTGGACTCATGAGGCGGCTGCATAG

mRNA sequence

ATGAATGGATACCTGACTCCGGTGGAGGGAAGGAAGCCGGAAGGAAACGAGTCGAATGAAGCCGTCACTGACGAAATTTGGGGTCTGCTACTTCAGGAAGCTGTGTTGAATGTCATTGTGAAGGAAAGCTTCTTAGCTGGTTCATTCTTATGGAACTTAGTTGCGTCATTTTATCAGAACTATAGCTGCTATTGCATCAGTTATGACAGTTTGAAATCAGTAATTGAACGATACAAGAAGACAAAAGAGGAGCATCAACAGCTTGCAAATCCGAACTCTGAGGCCAAGGGAAGTTGGAACTGGATATTTCCAGAAATGATGCGTGGTCTGGATTGGGAAACACAGAAGATTACAAAAAGCTATCAAACACCTGAAGTCCCAAATTGCAAAAAGTCAATCAATGTAATGAACCATGCACAACTTACTCCAGTTGAATGGAAAAACTGGACTCATGAGGCGGCTGCATAG

Coding sequence (CDS)

ATGAATGGATACCTGACTCCGGTGGAGGGAAGGAAGCCGGAAGGAAACGAGTCGAATGAAGCCGTCACTGACGAAATTTGGGGTCTGCTACTTCAGGAAGCTGTGTTGAATGTCATTGTGAAGGAAAGCTTCTTAGCTGGTTCATTCTTATGGAACTTAGTTGCGTCATTTTATCAGAACTATAGCTGCTATTGCATCAGTTATGACAGTTTGAAATCAGTAATTGAACGATACAAGAAGACAAAAGAGGAGCATCAACAGCTTGCAAATCCGAACTCTGAGGCCAAGGGAAGTTGGAACTGGATATTTCCAGAAATGATGCGTGGTCTGGATTGGGAAACACAGAAGATTACAAAAAGCTATCAAACACCTGAAGTCCCAAATTGCAAAAAGTCAATCAATGTAATGAACCATGCACAACTTACTCCAGTTGAATGGAAAAACTGGACTCATGAGGCGGCTGCATAG

Protein sequence

MNGYLTPVEGRKPEGNESNEAVTDEIWGLLLQEAVLNVIVKESFLAGSFLWNLVASFYQNYSCYCISYDSLKSVIERYKKTKEEHQQLANPNSEAKGSWNWIFPEMMRGLDWETQKITKSYQTPEVPNCKKSINVMNHAQLTPVEWKNWTHEAAA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23645.1Spo23645.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23645.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23645.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23645.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23645.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 68..88
scor

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0006887 exocytosis
biological_process GO:0006508 proteolysis
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006281 DNA repair
biological_process GO:0007033 vacuole organization
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006906 vesicle fusion
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0048868 pollen tube development
biological_process GO:0006651 diacylglycerol biosynthetic process
biological_process GO:0005983 starch catabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0016311 dephosphorylation
cellular_component GO:0005768 endosome
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0031201 SNARE complex
cellular_component GO:0016020 membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005797 Golgi medial cisterna
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000149 SNARE binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0008080 N-acetyltransferase activity
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0008195 phosphatidate phosphatase activity
molecular_function GO:0047874 dolichyldiphosphatase activity
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:2001070 starch binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0046983 protein dimerization activity
RNA-Seq Expression