Spo23704 (gene)

Overview
NameSpo23704
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein, putative
Locationchr2 : 52300248 .. 52300898 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGATGTGGTGGGACATCTCTCTACAAGCTCTGATCTTCCTAGTAAGCATCCTCACATACTTATGGACAAACAACATCCCTCAAAAACTCTTCACACGTTACCACTCCTACCGCAACCGCAACAAACACCAAGCTCGCCGCCACTTCGTTAAAGCCGCCGATCACCTAGCTAAGTCCAAATACTCCTCCGCCGTAACTGAAGCCGACGCCGCCGTCCTCCTCGATCCTACCGACGCCGCCAACCACATCCTCAAGGCCCTCGCGCTTGAGCTCCAGGGGTTCAAGACCTCCGCGCTGGACGCCCTCAACGTCGCGTTGTCCCCACTCGCGGTGGCGTCGCTGGAGAAGGAGGAGAAGGCGGACGCGATGGCGAAGCGGGCTGGGTTGAGGATGGAGGTGAGTCGACTCGCTCGAGTTGAGTCGGATGGGGTTGATAAAGAGGTTTGGGGAGGGGCGGAGAGGGAGCTCAGGGAGGCGGTGGAGTTGAAGAGAGAGAGTGGGAGAGCGTGGTGTTTGTTGGCGGAGTGTTGTGAGGGGTTGGGGAAGAGGGAGGAGGCGGTGGAGGCGTTTGAGGAGGCGGTTCGAGTTGCGCCTGACTCGGTGGTGGCTCGGAATGGGTTGGAACGGTTAAAGTTAGTTGAATGA

mRNA sequence

ATGTCGTCGATGTGGTGGGACATCTCTCTACAAGCTCTGATCTTCCTAGTAAGCATCCTCACATACTTATGGACAAACAACATCCCTCAAAAACTCTTCACACGTTACCACTCCTACCGCAACCGCAACAAACACCAAGCTCGCCGCCACTTCGTTAAAGCCGCCGATCACCTAGCTAAGTCCAAATACTCCTCCGCCGTAACTGAAGCCGACGCCGCCGTCCTCCTCGATCCTACCGACGCCGCCAACCACATCCTCAAGGCCCTCGCGCTTGAGCTCCAGGGGTTCAAGACCTCCGCGCTGGACGCCCTCAACGTCGCGTTGTCCCCACTCGCGGTGGCGTCGCTGGAGAAGGAGGAGAAGGCGGACGCGATGGCGAAGCGGGCTGGGTTGAGGATGGAGGTGAGTCGACTCGCTCGAGTTGAGTCGGATGGGGTTGATAAAGAGGTTTGGGGAGGGGCGGAGAGGGAGCTCAGGGAGGCGGTGGAGTTGAAGAGAGAGAGTGGGAGAGCGTGGTGTTTGTTGGCGGAGTGTTGTGAGGGGTTGGGGAAGAGGGAGGAGGCGGTGGAGGCGTTTGAGGAGGCGGTTCGAGTTGCGCCTGACTCGGTGGTGGCTCGGAATGGGTTGGAACGGTTAAAGTTAGTTGAATGA

Coding sequence (CDS)

ATGTCGTCGATGTGGTGGGACATCTCTCTACAAGCTCTGATCTTCCTAGTAAGCATCCTCACATACTTATGGACAAACAACATCCCTCAAAAACTCTTCACACGTTACCACTCCTACCGCAACCGCAACAAACACCAAGCTCGCCGCCACTTCGTTAAAGCCGCCGATCACCTAGCTAAGTCCAAATACTCCTCCGCCGTAACTGAAGCCGACGCCGCCGTCCTCCTCGATCCTACCGACGCCGCCAACCACATCCTCAAGGCCCTCGCGCTTGAGCTCCAGGGGTTCAAGACCTCCGCGCTGGACGCCCTCAACGTCGCGTTGTCCCCACTCGCGGTGGCGTCGCTGGAGAAGGAGGAGAAGGCGGACGCGATGGCGAAGCGGGCTGGGTTGAGGATGGAGGTGAGTCGACTCGCTCGAGTTGAGTCGGATGGGGTTGATAAAGAGGTTTGGGGAGGGGCGGAGAGGGAGCTCAGGGAGGCGGTGGAGTTGAAGAGAGAGAGTGGGAGAGCGTGGTGTTTGTTGGCGGAGTGTTGTGAGGGGTTGGGGAAGAGGGAGGAGGCGGTGGAGGCGTTTGAGGAGGCGGTTCGAGTTGCGCCTGACTCGGTGGTGGCTCGGAATGGGTTGGAACGGTTAAAGTTAGTTGAATGA

Protein sequence

MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23704.1Spo23704.1mRNA


Homology
[Close]
BLAST of Spo23704.1 vs. NCBI nr
Match: gi|902205812|gb|KNA15277.1| (hypothetical protein SOVF_099650 [Spinacia oleracea])

HSP 1 Score: 407.9 bits (1047), Expect = 1.100e-110
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 

		  

Query: 1   MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK 60
           MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK
Sbjct: 1   MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK 60

Query: 61  SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE 120
           SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE
Sbjct: 61  SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE 120

Query: 121 KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE 180
           KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE
Sbjct: 121 KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE 180

Query: 181 GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE 217
           GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE
Sbjct: 181 GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE 216
[Close]
BLAST of Spo23704.1 vs. NCBI nr
Match: gi|731311898|ref|XP_010671644.1| (PREDICTED: uncharacterized protein LOC104888384 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 325.9 bits (834), Expect = 5.500e-86
Identity = 170/211 (80.57%), Postives = 195/211 (92.42%), Query Frame = 1 

		  

Query: 3   SMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSK 62
           SMWWD+SLQALIF+VSIL+YLWTNNIPQKLFT+YH+YRNR+KHQ+RRHFVKAA+HLA S 
Sbjct: 2   SMWWDLSLQALIFIVSILSYLWTNNIPQKLFTKYHTYRNRHKHQSRRHFVKAAEHLANSD 61

Query: 63  YSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEEKA 122
            SSAV++ADAA+LLDPTDAANHI+K+LALELQG+ TSALDAL+VALSPLA+ASL  +E+A
Sbjct: 62  LSSAVSQADAAILLDPTDAANHIIKSLALELQGYTTSALDALDVALSPLAIASLGVDERA 121

Query: 123 DAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCEGL 182
           DA+AKRAGLRMEVSRL RVES GVD EVW  AERELREAV+++RESGRAWCLLAECC GL
Sbjct: 122 DAIAKRAGLRMEVSRLGRVES-GVDVEVWSAAERELREAVKVRRESGRAWCLLAECCLGL 181

Query: 183 GKREEAVEAFEEAVRVAPDSVVARNGLERLK 214
           GK +EA +AFEEAVRVAPDSVVA  GL+RLK
Sbjct: 182 GKIDEARDAFEEAVRVAPDSVVASQGLDRLK 211
[Close]
BLAST of Spo23704.1 vs. NCBI nr
Match: gi|697095606|ref|XP_009612160.1| (PREDICTED: uncharacterized protein LOC104105529 [Nicotiana tomentosiformis])

HSP 1 Score: 169.1 bits (427), Expect = 8.500e-39
Identity = 107/224 (47.77%), Postives = 146/224 (65.18%), Query Frame = 1 

		  

Query: 2   SSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKS 61
           S+MW D+ LQA++ L ++  +L+  NIPQK F++    RNR   QA+RHFV+ A  L+++
Sbjct: 6   SNMWRDLLLQAVLILATVFMFLFMYNIPQKFFSKLR-LRNRADMQAKRHFVQGAQLLSQA 65

Query: 62  KYS-------------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVAL 121
           K S             SA  EAD A+ LDP DAA HILKALAL+LQGFKTSALD++++AL
Sbjct: 66  KSSAAKDRSAAASLAKSAEAEADLAIALDPRDAAAHILKALALDLQGFKTSALDSIDIAL 125

Query: 122 SPLAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRES 181
           SPLAV SL + EKADA+ KRA LR+ VSR  +V+S             +L E+V LK ++
Sbjct: 126 SPLAVKSLSEPEKADALFKRAELRLAVSRRGQVDS----------VIEDLTESVRLKGDN 185

Query: 182 GRAWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
            +A+CLL +C E  G  EEA E +E+A++V P+   AR  L+RL
Sbjct: 186 VKAFCLLGDCYEKKGLTEEAQEVYEKALKVQPNFAPAREALDRL 218
[Close]
BLAST of Spo23704.1 vs. NCBI nr
Match: gi|971534353|ref|XP_015170191.1| (PREDICTED: uncharacterized protein LOC107063177 [Solanum tuberosum])

HSP 1 Score: 162.5 bits (410), Expect = 8.000e-37
Identity = 103/222 (46.40%), Postives = 148/222 (66.67%), Query Frame = 1 

		  

Query: 4   MWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKY 63
           MW D+ LQA++ LV+I  +L+  N+PQK F++   +RNR   Q++RHFV+ A  L+++K 
Sbjct: 9   MWRDLLLQAILILVTIFMFLFMYNVPQKYFSKLR-FRNRADMQSKRHFVQGAQLLSQAKS 68

Query: 64  S-------------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSP 123
           +             SA  +AD A+ LDP DAA HILKALAL+LQGFKTSALD+++VALSP
Sbjct: 69  AAVKDRSNAISLAKSAEAQADLAIALDPKDAAAHILKALALDLQGFKTSALDSIDVALSP 128

Query: 124 LAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGR 183
           LAV SL + E+ADA+ KRA LR+  SR  +++S      V G    +L ++V LK ++ +
Sbjct: 129 LAVKSLSEPERADALFKRAQLRLAASRREQIDS------VIG----DLTQSVRLKGDNVK 188

Query: 184 AWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
           A+CLL +C E  G +EEA +A++EA +V P+   AR  L+RL
Sbjct: 189 AFCLLGDCYEKKGLKEEAQKAYQEAQKVQPNFAPAREALDRL 219
[Close]
BLAST of Spo23704.1 vs. NCBI nr
Match: gi|698566347|ref|XP_009773482.1| (PREDICTED: uncharacterized protein LOC104223708 [Nicotiana sylvestris])

HSP 1 Score: 162.2 bits (409), Expect = 1.000e-36
Identity = 103/224 (45.98%), Postives = 145/224 (64.73%), Query Frame = 1 

		  

Query: 2   SSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKS 61
           ++MW D+ LQA++ L ++  +L+  NIPQK F++    RNR   QA+RHFV+ A  L+++
Sbjct: 6   NNMWRDLLLQAVLILATVFMFLFMYNIPQKFFSKLR-LRNRADMQAKRHFVQGAQLLSQA 65

Query: 62  KYS-------------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVAL 121
           K +             SA  EAD A+ LDP DAA HILKALAL LQGFKTSALD++++AL
Sbjct: 66  KSTFAKDRSAAASLAKSAEAEADLAIALDPRDAAAHILKALALVLQGFKTSALDSIDIAL 125

Query: 122 SPLAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRES 181
           SPLAV SL + EKADA+ KRA LR+ VSR  +V+S             +L E+V LK ++
Sbjct: 126 SPLAVKSLSEPEKADALFKRAELRLAVSRRGQVDS----------VVEDLTESVRLKGDN 185

Query: 182 GRAWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
            +A+ LL +C E  G +EEA E +E+A+++ P+   AR  L+RL
Sbjct: 186 VKAFYLLGDCYEKKGLKEEAQEVYEKALKIQPNFAPAREALDRL 218
[Close]
BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R943_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099650 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 7.600e-111
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1 

		  

Query: 1   MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK 60
           MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK
Sbjct: 1   MSSMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAK 60

Query: 61  SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE 120
           SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE
Sbjct: 61  SKYSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEE 120

Query: 121 KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE 180
           KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE
Sbjct: 121 KADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCE 180

Query: 181 GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE 217
           GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE
Sbjct: 181 GLGKREEAVEAFEEAVRVAPDSVVARNGLERLKLVE 216
[Close]
BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D8A6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g005610 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.800e-86
Identity = 170/211 (80.57%), Postives = 195/211 (92.42%), Query Frame = 1 

		  

Query: 3   SMWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSK 62
           SMWWD+SLQALIF+VSIL+YLWTNNIPQKLFT+YH+YRNR+KHQ+RRHFVKAA+HLA S 
Sbjct: 2   SMWWDLSLQALIFIVSILSYLWTNNIPQKLFTKYHTYRNRHKHQSRRHFVKAAEHLANSD 61

Query: 63  YSSAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEKEEKA 122
            SSAV++ADAA+LLDPTDAANHI+K+LALELQG+ TSALDAL+VALSPLA+ASL  +E+A
Sbjct: 62  LSSAVSQADAAILLDPTDAANHIIKSLALELQGYTTSALDALDVALSPLAIASLGVDERA 121

Query: 123 DAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAWCLLAECCEGL 182
           DA+AKRAGLRMEVSRL RVES GVD EVW  AERELREAV+++RESGRAWCLLAECC GL
Sbjct: 122 DAIAKRAGLRMEVSRLGRVES-GVDVEVWSAAERELREAVKVRRESGRAWCLLAECCLGL 181

Query: 183 GKREEAVEAFEEAVRVAPDSVVARNGLERLK 214
           GK +EA +AFEEAVRVAPDSVVA  GL+RLK
Sbjct: 182 GKIDEARDAFEEAVRVAPDSVVASQGLDRLK 211
[Close]
BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Match: M1AJJ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401009338 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.600e-37
Identity = 103/222 (46.40%), Postives = 148/222 (66.67%), Query Frame = 1 

		  

Query: 4   MWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKY 63
           MW D+ LQA++ LV+I  +L+  N+PQK F++   +RNR   Q++RHFV+ A  L+++K 
Sbjct: 9   MWRDLLLQAILILVTIFMFLFMYNVPQKYFSKLR-FRNRADMQSKRHFVQGAQLLSQAKS 68

Query: 64  S-------------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSP 123
           +             SA  +AD A+ LDP DAA HILKALAL+LQGFKTSALD+++VALSP
Sbjct: 69  AAVKDRSNAISLAKSAEAQADLAIALDPKDAAAHILKALALDLQGFKTSALDSIDVALSP 128

Query: 124 LAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGR 183
           LAV SL + E+ADA+ KRA LR+  SR  +++S      V G    +L ++V LK ++ +
Sbjct: 129 LAVKSLSEPERADALFKRAQLRLAASRREQIDS------VIG----DLTQSVRLKGDNVK 188

Query: 184 AWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
           A+CLL +C E  G +EEA +A++EA +V P+   AR  L+RL
Sbjct: 189 AFCLLGDCYEKKGLKEEAQKAYQEAQKVQPNFAPAREALDRL 219
[Close]
BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Match: A0A061FLU3_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_034525 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-35
Identity = 103/220 (46.82%), Postives = 143/220 (65.00%), Query Frame = 1 

		  

Query: 4   MWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKY 63
           MW D+ LQ  I LV+I  +L  ++IP+K+FT+   YRNR   QA+RHFV  A  LA+++ 
Sbjct: 1   MWTDLLLQGAIILVTIFMFLAMHDIPKKIFTKIR-YRNRADFQAKRHFVLGAQLLAQARS 60

Query: 64  SS-----------AVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLA 123
           S            A +EA+ A+ LDP DAA +ILKALAL+LQG+KTSALD+L++ALSPLA
Sbjct: 61  SKSRSSTTSLAKQAESEANKAISLDPKDAAAYILKALALDLQGYKTSALDSLDIALSPLA 120

Query: 124 VASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGRAW 183
             SL  +E+ DA+ KRA L+M ++R       GVD  +      +L +AVEL  ++G+A+
Sbjct: 121 AKSLTDKERGDALFKRAELKMAMNR----RGSGVDSAI-----EDLTKAVELGADNGKAF 180

Query: 184 CLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
           CLL EC E    + +A  AFEEA++V P S VAR  ++RL
Sbjct: 181 CLLGECYEIKKMKADAKAAFEEALKVEPSSNVARAAVDRL 210
[Close]
BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Match: K4BU85_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.300e-35
Identity = 101/222 (45.50%), Postives = 142/222 (63.96%), Query Frame = 1 

		  

Query: 4   MWWDISLQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKY 63
           MW D+ LQA++ LV+I  +L+  N+PQK F++    RNR   Q++RHFV+ A  L+++K 
Sbjct: 9   MWRDLLLQAVLILVTIFMFLFMYNVPQKYFSKLR-LRNRADMQSKRHFVQGAQLLSQAKS 68

Query: 64  S-------------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSP 123
           +             SA  +AD A+ LDP DAA HILKALAL+LQGFKTSALD+++VALSP
Sbjct: 69  AAAKDRSKSTSLAKSAEAQADLAIALDPKDAAAHILKALALDLQGFKTSALDSIDVALSP 128

Query: 124 LAVASLEKEEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELKRESGR 183
           LAV SL + EKADA+ KRA LR+   ++  V  D             L ++V LK ++ +
Sbjct: 129 LAVKSLSEPEKADALFKRAQLRLAAEQVDSVIED-------------LSQSVRLKGDNVK 188

Query: 184 AWCLLAECCEGLGKREEAVEAFEEAVRVAPDSVVARNGLERL 213
           A+CLL +C E  G +EEA +A++EA +V P+   AR  L+RL
Sbjct: 189 AFCLLGDCYEKKGLKEEARKAYQEAQKVQPNFAPAREALDRL 216
[Close]
BLAST of Spo23704.1 vs. TAIR (Arabidopsis)
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 4.000e-18
Identity = 68/207 (32.85%), Postives = 118/207 (57.00%), Query Frame = 1 

		  

Query: 10  LQALIFLVSILTYLWTNNIPQKLFTRYHSYRNRNKHQARRHFVKAADHLAKSKYS----- 69
           +Q  I +++++ +     + Q+  T++ + ++R   Q +R  ++A+  LA+++ +     
Sbjct: 8   IQGAILVLTLVMFWAIKYLSQRGLTKFRT-KHRATLQTQRQLIQASRLLARARTTPKKSQ 67

Query: 70  ------SAVTEADAAVLLDPTDAANHILKALALELQGFKTSALDALNVALSPLAVASLEK 129
                 +A+TEAD  + + P DAA HI++ALAL+L G  TSAL + ++AL+   + SL  
Sbjct: 68  SQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKSLSV 127

Query: 130 EEKADAMAKRAGLRMEVSRLARVESDGVDKEVWGGAERELREAVELK--RESGRAWCLLA 189
            E+ADA+ KRA +++ V+R  R++S          A  +L EAV L    ++ R + LL 
Sbjct: 128 GERADALVKRAEMKLAVNRRRRIDS----------AVEDLEEAVRLAAGTDTARLFRLLG 187

Query: 190 ECCEGLGKREEAVEAFEEAVRVAPDSV 204
           EC E  G +E+A  AF EA++  P SV
Sbjct: 188 ECYEFKGLKEKAQWAFNEALKAQPSSV 203
The following BLAST results are available for this feature:
BLAST of Spo23704.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902205812|gb|KNA15277.1|1.1e-110100.hypothetical protein SOVF_0996... [more]
gi|731311898|ref|XP_010671644.1|5.5e-8680.5PREDICTED: uncharacterized pro... [more]
gi|697095606|ref|XP_009612160.1|8.5e-3947.7PREDICTED: uncharacterized pro... [more]
gi|971534353|ref|XP_015170191.1|8.0e-3746.4PREDICTED: uncharacterized pro... [more]
gi|698566347|ref|XP_009773482.1|1.0e-3645.9PREDICTED: uncharacterized pro... [more]
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BLAST of Spo23704.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R943_SPIOL7.6e-111100.Uncharacterized protein OS=Spi... [more]
A0A0J8D8A6_BETVU3.8e-8680.5Uncharacterized protein OS=Bet... [more]
M1AJJ6_SOLTU5.6e-3746.4Uncharacterized protein OS=Sol... [more]
A0A061FLU3_THECC1.4e-3546.8Tetratricopeptide repeat-like ... [more]
K4BU85_SOLLC2.3e-3545.5Uncharacterized protein OS=Sol... [more]
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BLAST of Spo23704.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23704.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G65520.14.0e-1832.8Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 157..212
score: 5.8E-17coord: 42..102
score: 5.8
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 41..206
score: 5.77
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 154..202
score: 10
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 170..201
score: 1.
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 169..202
score: 2.1E-5coord: 47..80
score: 1
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 47..80
score: 5.782coord: 169..202
score: 9
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 1..212
score: 7.8
NoneNo IPR availablePANTHERPTHR26312:SF71SUBFAMILY NOT NAMEDcoord: 1..212
score: 7.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0001666 response to hypoxia
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0050832 defense response to fungus
biological_process GO:2000038 regulation of stomatal complex development
biological_process GO:2000037 regulation of stomatal complex patterning
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009409 response to cold
biological_process GO:0010224 response to UV-B
biological_process GO:0048481 plant ovule development
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway
biological_process GO:0006094 gluconeogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0042732 D-xylose metabolic process
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0006508 proteolysis
biological_process GO:0015812 gamma-aminobutyric acid transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0080136 priming of cellular response to stress
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0006468 protein phosphorylation
biological_process GO:0002213 defense response to insect
biological_process GO:0006096 glycolytic process
biological_process GO:0000169 activation of MAPK activity involved in osmosensory signaling pathway
biological_process GO:0006857 oligopeptide transport
biological_process GO:0010120 camalexin biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0010229 inflorescence development
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0043069 negative regulation of programmed cell death
cellular_component GO:0005829 cytosol
cellular_component GO:0005834 heterotrimeric G-protein complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005886 plasma membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004034 aldose 1-epimerase activity
molecular_function GO:0015185 gamma-aminobutyric acid transmembrane transporter activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0004707 MAP kinase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0030246 carbohydrate binding
RNA-Seq Expression