Spo23713 (gene)

Overview
NameSpo23713
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Locationchr2 : 52556444 .. 52560353 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGAGGAAATGGTAATAACAAAAAACAACAAAAGAGGAGGAGCAAAGCAGGTGATTTTTTCATGGCAACTTTGGTAATTTGGGCACTGTCGGTGGGGTACGAAATTGTGTTCAACAACAAGAAAGAGCTTCTTCCTGTTGTTTATGGTTGCTTGTTCTTCCAAATTGCGAACTGGGTTCTTCGTTTTTGGGTTTCCAGGGAACCCCTTTTTGTCAATACTGTTGTCTCTCTCCTTCATTCCTCTTTTGCTTCTGTTTCTGGTATACCCTCTCCCTCTCTCTTTCTAATTTTGGTTGATTTTGATTTGGGTAATTTGTTGCTTTTCTGGTGTTTGTGACAATATACAATAATGTGTAGTAAGAATGTTGTGATCAAATAGTATACAATAATGTTGTGACAATATACAATAATTTGTAATTTGTTGCTTTTCTGGTGTAATGGGACTCAAGTAGCTAGGTTGTGATAAAATGGTATACAATTCACCCCAATATAGCTACTTTGACTCTTTAAGTACCGATGTAGAGTATGTTAGTGCCAATAACGCAAGTGACTTGTATTGGTACTAATAAGTAGCGTATTGTTCGTATCAATAACAAATTAATCCGTATTAGTACGAGTCACTTGCATCTATTTTAATGGAAATGTACGCACAACTGCACAAGCCACTTTTGACATAAACTTTCTTGCTAGTTTAGTTGGTAAAAGTCATGACGGGTTGTGTTATTTTATTAGGAGGGAATTTCTCTAATAGTAGTGCCTTATGTTGACATATCAAAAGAATGAGAGAAATGGTGGTGTCAATTTTAGGAACTAGGAACTGTGTGGAATGGTATAAGGTACTTATCTTAGTTTGGTAATCTTAATGAATGTGCAAATAGCCAAATGCCCATATTTCATGAGCAAAAAATTGGCAAAGAAAGGGGTTAATTTTGCATTTGTGTTAGTCTGGTACGTCTTGATTCTGGATTTGAAACGGCGAACCCACCTCTTGTTGGTGGGTATATAACAGTATGTCTGTATATGCTCCTTAGTCGTTTGTTAATCTTGATACTAAGCTTTGCATTTTAAGAGTGGTTTATTGGTGAAAGCCTGAATTCTGAAACCACTGCATATCATTTACCAGCTGTTTCTTGAGACTGCAGCTCGTGATCCCTTATCCGAATTTTTGCTTTTACATACCTAATTAGTCTTTCTGAAGTAAATTGCTTTACAATGAATCAAAGAGTTTTATGATGTAAAGTTGATGGTATAGGAGTATTAACTCTAATTGTTGGCTGACAATCGATTTTCACTTGATTAAATCCCTGCATCATATTCTATTGGTGGTTTTCAGGACATTGGCCCATTCACCCTAGGAAGAGAATTTTTGGTTTTATGCTTACATTGTCTGATCACAAAATCGAAGTTCTTTACAAAATCTGACCGAATTATACTTTCATAAGCGAAACACTTGATATAGGCTTATACATGGGGTTTGTGATCTTGAAGTATGTAATTAACAAGAACCTTAGCTCATAGTGGTTCTAGATGATTGATTATCTTGTTTAATAAACTTAAGTTGTATCTTGTTTAGGTGCACCAAATCATGTCAAGTTTAATGTTAACTGTAAGTGAGGTACTTGAGTAGATTTGGCCTGGACTCTTCATTTTATCTCAAATACCCGTGTCGGATCCGCGACACTTGGACATGGATATGGACACTTGGACACTTCATTCCAAAATCATACAATATTTTCACAAAATAGCCGTGTCGGACACTTGGACACGTACCCATGTCCGACATGGGTATCCGAGGCCGGGTAACATAGGATTTGGCTTTTTTTTCCCTTCTATCATGTCCTCCCAATATGAATTATCTACTATTTATGTGATTTGTTGCCTATCGCTTCGTGGTATCATATGATTCACATTCTTGCTTCTCCTCACTCATCCATCATTCAAAACATGCATACTTCTCCTTGCTTTGTGTATGACAAACTTGCTTGCATCTTTTGCAGTTGTGTTTATTTTGGTCAACCAATGGAGTGCAAAGCATTCCATTCAGATGTTTGATCACGAAGAACTTGTTCGCAATACTTGGCCATGGGCATACACAGCCTTATGTTTCTCTTGTGGTTATTTTGCATATGATCAGTGGGATATGTTGAAATATGAACTATATAGTGGCTGGTTCCCATCTATCCTGGCACATCACCTGATCCTTCTTCTTTGCTTCACGCTTGCTCTGTATCGGAATGTCACCATCAACTATCTCATCCTTACCCTTATCTGTGAGGTAATCTTCTATGTTCATTTTGAAGCTTTATTTCTGCTAGTCAATGGTTCTATGTCGTTTCTGAACTGCACAGGTCCTATTTCGTTACCCAATTCGAGTATTTTTCTCCATATCTTTTTTTTAGTTACTTGAGATTTACCATAATCTGCAATTTTAAATTGTCTGTAACCTCCGTTTGTAGGTCGCTTATTATTAGGAATTTAGGATGAGTTCACATCAGTTTTCCACTAACTTTTACCTACTTTTTCATTGTTCAGGCTCACATAAGACTCTCCCTATGTGTACACATTATCCCCAGACTCACCTAAACTCCTAAAAGAATATAATAAAGTAGGATAAAGTGTGATGATGTGATATGATTTGATTTGGTTAGAGGAAAAAGTGGAGTCTTAAGTGAGGCTTGAATGAGTCTTGGACTTTCAAACTCACCTCAAGATTTGTTGTAGTCTTTTGCCACATTATTCCAAGAGTCTGACAGACTCCCTTCCAGACTAGGGATAAACGCACCCTTAGTCATTATCATCATTTTATTGGAATGGCTTGCCTCTCATTATTTTGTTGCAATGCCTTGAATCTAGCGCTTCAGGTAACTCCCCACTAGCCATTATTATGTAATCCCTCAATTTTAAGTATGAACACCTTGGAGTCCTCATATCCTGATAGGATTGTTCTCCCATATGGACGGAGCTAACTTTTTGTATTGAAAGCATCTAACTTTCACCCCTTCTCTTTGTCACAATAATTAACCTTTAATGGCAATCGGTTGTTGGTTGTTGGCTGGTGGTTGTTTTACTTGGCTTGTTTGACTAGCTATTTGTGTTGGCTTTTTATGTTGGTTGTTTGATTGTGTTTGGTAAAGTTGGTTGTTGGCTCCCAGCTGTTTAATAATTAATTAGTAAATTGAAAATCCAACAACCAATGTAAAAAAAGCTACTCTTACTAGCTTTTGGATTTTGACAAAAAAAACCGACTTTTTGGCCAAGGAAAAAACCACTTATCAAACATTTATATTGGTTGTTTGACCACTCTACTGTTACTAGCTTTTGGATTTTGGCAAAAAAGACAGATTTTTAGCCAAGGAAAAAACCACTTATCAAACATTTATATTGGCTGTTTGATCAAAGAAAAAGCCAAAAGCCAATGAAAAGCCAATTACCAAACAGGCCCGATGTATGATCCAATAGAAGATATCATGAACCTTCTTATGGAAATAGCTTTAAGCCATAATAATAGACATGTTTTCTAATATCAATTTGTGTAGTTTTATGATTCTCCACTCTCTCTCGACCTAAACCATCTCATTTTAACCGTGATTAAACAGTTGCATTCAGTCTTCCTACACGTGAGGAAAGTGAGACGGATGGCAGGGATTAGGAGTGCAGAGAGTACAATCGTGAAGGCGGAATGGTTTCTAAACTGGCTCACCTTCTTCTTTGCTCGAGTACTACCACACGCGTTAATATTGATCAAACTTGTAATAGACGCCCCAAAGTTTGACAAGGGTGGTGTAGAACTCCCACTTGCTTTATTCGGGATGATTGGAATGAATTTGCTCAATATCGGTCTAGGCATCGACATTTTGGGTGCTTATAAGAGAGAAAAGAGTCCACTTAATCATCATAATGATTAA

mRNA sequence

ATGGTGAGAGGAAATGGTAATAACAAAAAACAACAAAAGAGGAGGAGCAAAGCAGGTGATTTTTTCATGGCAACTTTGGTAATTTGGGCACTGTCGGTGGGGTACGAAATTGTGTTCAACAACAAGAAAGAGCTTCTTCCTGTTGTTTATGGTTGCTTGTTCTTCCAAATTGCGAACTGGGTTCTTCGTTTTTGGGTTTCCAGGGAACCCCTTTTTGTCAATACTGTTGTCTCTCTCCTTCATTCCTCTTTTGCTTCTGTTTCTGTTGTGTTTATTTTGGTCAACCAATGGAGTGCAAAGCATTCCATTCAGATGTTTGATCACGAAGAACTTGTTCGCAATACTTGGCCATGGGCATACACAGCCTTATGTTTCTCTTGTGGTTATTTTGCATATGATCAGTGGGATATGTTGAAATATGAACTATATAGTGGCTGGTTCCCATCTATCCTGGCACATCACCTGATCCTTCTTCTTTGCTTCACGCTTGCTCTGTATCGGAATGTCACCATCAACTATCTCATCCTTACCCTTATCTGTGAGTTTTATGATTCTCCACTCTCTCTCGACCTAAACCATCTCATTTTAACCGTGATTAAACAGTTGCATTCAGTCTTCCTACACGTGAGGAAAGTGAGACGGATGGCAGGGATTAGGAGTGCAGAGAGTACAATCGTGAAGGCGGAATGGTTTCTAAACTGGCTCACCTTCTTCTTTGCTCGAGTACTACCACACGCGTTAATATTGATCAAACTTGTAATAGACGCCCCAAAGTTTGACAAGGGTGGTGTAGAACTCCCACTTGCTTTATTCGGGATGATTGGAATGAATTTGCTCAATATCGGTCTAGGCATCGACATTTTGGGTGCTTATAAGAGAGAAAAGAGTCCACTTAATCATCATAATGATTAA

Coding sequence (CDS)

ATGGTGAGAGGAAATGGTAATAACAAAAAACAACAAAAGAGGAGGAGCAAAGCAGGTGATTTTTTCATGGCAACTTTGGTAATTTGGGCACTGTCGGTGGGGTACGAAATTGTGTTCAACAACAAGAAAGAGCTTCTTCCTGTTGTTTATGGTTGCTTGTTCTTCCAAATTGCGAACTGGGTTCTTCGTTTTTGGGTTTCCAGGGAACCCCTTTTTGTCAATACTGTTGTCTCTCTCCTTCATTCCTCTTTTGCTTCTGTTTCTGTTGTGTTTATTTTGGTCAACCAATGGAGTGCAAAGCATTCCATTCAGATGTTTGATCACGAAGAACTTGTTCGCAATACTTGGCCATGGGCATACACAGCCTTATGTTTCTCTTGTGGTTATTTTGCATATGATCAGTGGGATATGTTGAAATATGAACTATATAGTGGCTGGTTCCCATCTATCCTGGCACATCACCTGATCCTTCTTCTTTGCTTCACGCTTGCTCTGTATCGGAATGTCACCATCAACTATCTCATCCTTACCCTTATCTGTGAGTTTTATGATTCTCCACTCTCTCTCGACCTAAACCATCTCATTTTAACCGTGATTAAACAGTTGCATTCAGTCTTCCTACACGTGAGGAAAGTGAGACGGATGGCAGGGATTAGGAGTGCAGAGAGTACAATCGTGAAGGCGGAATGGTTTCTAAACTGGCTCACCTTCTTCTTTGCTCGAGTACTACCACACGCGTTAATATTGATCAAACTTGTAATAGACGCCCCAAAGTTTGACAAGGGTGGTGTAGAACTCCCACTTGCTTTATTCGGGATGATTGGAATGAATTTGCTCAATATCGGTCTAGGCATCGACATTTTGGGTGCTTATAAGAGAGAAAAGAGTCCACTTAATCATCATAATGATTAA

Protein sequence

MVRGNGNNKKQQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23713.1Spo23713.1mRNA


Homology
[Close]
BLAST of Spo23713.1 vs. NCBI nr
Match: gi|902236718|gb|KNA24516.1| (hypothetical protein SOVF_015120 [Spinacia oleracea])

HSP 1 Score: 515.0 bits (1325), Expect = 8.900e-143
Identity = 259/281 (92.17%), Postives = 260/281 (92.53%), Query Frame = 1 

		  

Query: 23  MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFVNTVVSLLHS 82
           MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWV+RFWVSREPLFVNTVVSLLHS
Sbjct: 1   MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVVRFWVSREPLFVNTVVSLLHS 60

Query: 83  SFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL 142
           SFAS SVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL
Sbjct: 61  SFASASVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL 120

Query: 143 YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNHLILTVIKQL 202
           YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICE                    L
Sbjct: 121 YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICE--------------------L 180

Query: 203 HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG 262
           HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG
Sbjct: 181 HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG 240

Query: 263 GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND 304
           GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND
Sbjct: 241 GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND 261
[Close]
BLAST of Spo23713.1 vs. NCBI nr
Match: gi|731361567|ref|XP_010692424.1| (PREDICTED: uncharacterized protein LOC104905537 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 462.6 bits (1189), Expect = 5.200e-127
Identity = 239/304 (78.62%), Postives = 261/304 (85.86%), Query Frame = 1 

		  

Query: 1   MVRGNGNNKKQQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANW 60
           M+RG+ NNKKQQKR SKA  FFMATLV+W +SVG+EI FNNKKELLP+++  +FFQIAN 
Sbjct: 1   MMRGS-NNKKQQKR-SKAATFFMATLVMWGMSVGFEIAFNNKKELLPLIFSFVFFQIANS 60

Query: 61  VLRFWVSREPLFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAY 120
           +LR+WVSREPLFVNT VSLLHSS AS   VFIL NQW+AK SIQMF+HE+LVRNTWPWAY
Sbjct: 61  LLRYWVSREPLFVNTSVSLLHSSLASTFAVFILFNQWNAKGSIQMFEHEQLVRNTWPWAY 120

Query: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLIC 180
           TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILL+CF+LALYRNVTINYLILTLIC
Sbjct: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLVCFSLALYRNVTINYLILTLIC 180

Query: 181 EFYDSPLSLDLNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFA 240
           E                   QLHSVFLHVRK+RRMAGIRSAESTIVKAEW LNW+TFFFA
Sbjct: 181 E-------------------QLHSVFLHVRKLRRMAGIRSAESTIVKAEWVLNWITFFFA 240

Query: 241 RVLPHALILIKLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKS-PLN 300
           R+LPHALILIKLV DA KFDK GVELPLA+FGMIGMNLLNIGLG+DI GAYKREK+ P N
Sbjct: 241 RLLPHALILIKLVKDASKFDK-GVELPLAIFGMIGMNLLNIGLGMDIFGAYKREKNPPQN 282

Query: 301 HHND 304
           HH D
Sbjct: 301 HHKD 282
[Close]
BLAST of Spo23713.1 vs. NCBI nr
Match: gi|731361569|ref|XP_010692425.1| (PREDICTED: TLC domain-containing protein 2 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 459.9 bits (1182), Expect = 3.400e-126
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 1 

		  

Query: 1   MVRGNGNNKKQQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANW 60
           M+RG+ NNKKQQKR SKA  FFMATLV+W +SVG+EI FNNKKELLP+++  +FFQIAN 
Sbjct: 1   MMRGS-NNKKQQKR-SKAATFFMATLVMWGMSVGFEIAFNNKKELLPLIFSFVFFQIANS 60

Query: 61  VLRFWVSREPLFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAY 120
           +LR+WVSREPLFVNT VSLLHSS AS   VFIL NQW+AK SIQMF+HE+LVRNTWPWAY
Sbjct: 61  LLRYWVSREPLFVNTSVSLLHSSLASTFAVFILFNQWNAKGSIQMFEHEQLVRNTWPWAY 120

Query: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLIC 180
           TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILL+CF+LALYRNVTINYLILTLIC
Sbjct: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLVCFSLALYRNVTINYLILTLIC 180

Query: 181 EFYDSPLSLDLNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFA 240
           E                    LHSVFLHVRK+RRMAGIRSAESTIVKAEW LNW+TFFFA
Sbjct: 181 E--------------------LHSVFLHVRKLRRMAGIRSAESTIVKAEWVLNWITFFFA 240

Query: 241 RVLPHALILIKLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKS-PLN 300
           R+LPHALILIKLV DA KFDKG VELPLA+FGMIGMNLLNIGLG+DI GAYKREK+ P N
Sbjct: 241 RLLPHALILIKLVKDASKFDKG-VELPLAIFGMIGMNLLNIGLGMDIFGAYKREKNPPQN 281

Query: 301 HHND 304
           HH D
Sbjct: 301 HHKD 281
[Close]
BLAST of Spo23713.1 vs. NCBI nr
Match: gi|658007195|ref|XP_008338773.1| (PREDICTED: uncharacterized protein LOC103401839 [Malus domestica])

HSP 1 Score: 374.8 bits (961), Expect = 1.400e-100
Identity = 191/291 (65.64%), Postives = 217/291 (74.57%), Query Frame = 1 

		  

Query: 14  RRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFV 73
           +  KAG FF+ATLV+W +SV +EI+F+ + ELL VV GC F+Q ANWV+R +VSR+PLFV
Sbjct: 10  KEDKAGPFFLATLVLWFVSVLFEILFHRRSELLAVVAGCFFYQFANWVVRSFVSRDPLFV 69

Query: 74  NTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYD 133
           NT VSLLHSS  S SVVFILVN+W    S+ MF+H ELV  TWPWAY ALCFSCGYFAYD
Sbjct: 70  NTSVSLLHSSITSASVVFILVNRWLENGSVGMFEHAELVGRTWPWAYPALCFSCGYFAYD 129

Query: 134 QWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNH 193
           QWDML+Y LYSGW PSIL HHL+LL+CFTLALYRNVTINYLILTLICE            
Sbjct: 130 QWDMLQYGLYSGWIPSILMHHLVLLICFTLALYRNVTINYLILTLICE------------ 189

Query: 194 LILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLV 253
                   LHS+FLHVRKVRRMAGIR A S IVK EW LNW+TF  AR  PH LI  KL 
Sbjct: 190 --------LHSIFLHVRKVRRMAGIRDATSKIVKVEWVLNWVTFTLARTAPHILITAKLF 249

Query: 254 IDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLN---HH 302
            DAPKF K G+ELPLALFGM GMN LN  LGID+  A+KRE++P +   HH
Sbjct: 250 CDAPKFGK-GIELPLALFGMFGMNFLNASLGIDLFHAFKRERNPQHANAHH 279
[Close]
BLAST of Spo23713.1 vs. NCBI nr
Match: gi|658051625|ref|XP_008361548.1| (PREDICTED: uncharacterized protein LOC103425239 [Malus domestica])

HSP 1 Score: 372.9 bits (956), Expect = 5.500e-100
Identity = 190/291 (65.29%), Postives = 216/291 (74.23%), Query Frame = 1 

		  

Query: 14  RRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFV 73
           +  KAG FF+ATLV+W +SV +EI+F+ + ELL VV GC F+Q ANWV+R +VSR+PLFV
Sbjct: 10  KEDKAGPFFLATLVLWFVSVLFEILFHRRSELLAVVAGCFFYQFANWVVRSFVSRDPLFV 69

Query: 74  NTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYD 133
           NT VSLLHSS  S SVVF LVN+W    S+ MF+H ELV  TWPWAY ALCFSCGYFAYD
Sbjct: 70  NTSVSLLHSSITSASVVFXLVNRWLENGSVGMFEHAELVGRTWPWAYPALCFSCGYFAYD 129

Query: 134 QWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNH 193
           QWDML+Y LYSGW PSIL HHL+LL+CFTLALYRNVTINYLILTLICE            
Sbjct: 130 QWDMLQYGLYSGWIPSILMHHLVLLICFTLALYRNVTINYLILTLICE------------ 189

Query: 194 LILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLV 253
                   LHS+FLHVRKVRRMAGIR A S IVK EW LNW+TF  AR  PH LI  KL 
Sbjct: 190 --------LHSIFLHVRKVRRMAGIRDATSKIVKVEWVLNWVTFTLARTAPHILITAKLF 249

Query: 254 IDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLN---HH 302
            DAPKF K G+ELPLALFGM GMN LN  LGID+  A+KRE++P +   HH
Sbjct: 250 CDAPKFGK-GIELPLALFGMFGMNFLNASLGIDLFHAFKRERNPQHANAHH 279
[Close]
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYC0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015120 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 6.200e-143
Identity = 259/281 (92.17%), Postives = 260/281 (92.53%), Query Frame = 1 

		  

Query: 23  MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFVNTVVSLLHS 82
           MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWV+RFWVSREPLFVNTVVSLLHS
Sbjct: 1   MATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVVRFWVSREPLFVNTVVSLLHS 60

Query: 83  SFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL 142
           SFAS SVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL
Sbjct: 61  SFASASVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQWDMLKYEL 120

Query: 143 YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNHLILTVIKQL 202
           YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICE                    L
Sbjct: 121 YSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICE--------------------L 180

Query: 203 HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG 262
           HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG
Sbjct: 181 HSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVIDAPKFDKG 240

Query: 263 GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND 304
           GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND
Sbjct: 241 GVELPLALFGMIGMNLLNIGLGIDILGAYKREKSPLNHHND 261
[Close]
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJJ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020470 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.400e-126
Identity = 238/304 (78.29%), Postives = 260/304 (85.53%), Query Frame = 1 

		  

Query: 1   MVRGNGNNKKQQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANW 60
           M+RG+ NNKKQQKR SKA  FFMATLV+W +SVG+EI FNNKKELLP+++  +FFQIAN 
Sbjct: 1   MMRGS-NNKKQQKR-SKAATFFMATLVMWGMSVGFEIAFNNKKELLPLIFSFVFFQIANS 60

Query: 61  VLRFWVSREPLFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAY 120
           +LR+WVSREPLFVNT VSLLHSS AS   VFIL NQW+AK SIQMF+HE+LVRNTWPWAY
Sbjct: 61  LLRYWVSREPLFVNTSVSLLHSSLASTFAVFILFNQWNAKGSIQMFEHEQLVRNTWPWAY 120

Query: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLIC 180
           TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILL+CF+LALYRNVTINYLILTLIC
Sbjct: 121 TALCFSCGYFAYDQWDMLKYELYSGWFPSILAHHLILLVCFSLALYRNVTINYLILTLIC 180

Query: 181 EFYDSPLSLDLNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFA 240
           E                    LHSVFLHVRK+RRMAGIRSAESTIVKAEW LNW+TFFFA
Sbjct: 181 E--------------------LHSVFLHVRKLRRMAGIRSAESTIVKAEWVLNWITFFFA 240

Query: 241 RVLPHALILIKLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKS-PLN 300
           R+LPHALILIKLV DA KFDKG VELPLA+FGMIGMNLLNIGLG+DI GAYKREK+ P N
Sbjct: 241 RLLPHALILIKLVKDASKFDKG-VELPLAIFGMIGMNLLNIGLGMDIFGAYKREKNPPQN 281

Query: 301 HHND 304
           HH D
Sbjct: 301 HHKD 281
[Close]
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Match: V4T7I8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001495mg PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 6.100e-98
Identity = 186/287 (64.81%), Postives = 218/287 (75.96%), Query Frame = 1 

		  

Query: 11  QQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREP 70
           +Q  ++K G FF+ATL++W++SV +EI FN +KELL +V G  FFQIANWV+R  VSR+P
Sbjct: 107 KQSDKNKVGVFFLATLLLWSVSVLFEIAFNKRKELLFIVAGACFFQIANWVIRLLVSRDP 166

Query: 71  LFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYF 130
           LFVNT VSLLHS+  SVSVVFI+VNQW       MF+H ELV + W WAY ALCFSCGYF
Sbjct: 167 LFVNTSVSLLHSTITSVSVVFIVVNQWLRNGLNGMFEHSELVGSAWLWAYPALCFSCGYF 226

Query: 131 AYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLD 190
           AYDQWDML+Y LYSG  P IL HHL+LL+CFTLALYRNVTINYLILTLICE         
Sbjct: 227 AYDQWDMLQYRLYSGLIPGILVHHLLLLVCFTLALYRNVTINYLILTLICE--------- 286

Query: 191 LNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILI 250
                      LHS+FLHVRKVRRMAGIR ++S IV+ EW LNW+TFF AR+  H LI I
Sbjct: 287 -----------LHSIFLHVRKVRRMAGIRDSKSRIVRVEWVLNWITFFLARIASHLLITI 346

Query: 251 KLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKSP 298
           KL+ DA KF+K G+ELPLALFGM GMNLLNI LGID+  A+KREK+P
Sbjct: 347 KLIRDASKFEK-GIELPLALFGMAGMNLLNISLGIDLFNAFKREKNP 372
[Close]
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Match: A0A067GLX8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023487mg PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 6.100e-98
Identity = 186/287 (64.81%), Postives = 218/287 (75.96%), Query Frame = 1 

		  

Query: 11  QQKRRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREP 70
           +Q  ++K G FF+ATL++W++SV +EI FN +KELL +V G  FFQIANWV+R  VSR+P
Sbjct: 7   KQSDKNKVGVFFLATLLLWSVSVLFEIAFNKRKELLFIVAGACFFQIANWVIRLLVSRDP 66

Query: 71  LFVNTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYF 130
           LFVNT VSLLHS+  SVSVVFI+VNQW       MF+H ELV + W WAY ALCFSCGYF
Sbjct: 67  LFVNTSVSLLHSTITSVSVVFIVVNQWLRNGLNGMFEHSELVGSAWLWAYPALCFSCGYF 126

Query: 131 AYDQWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLD 190
           AYDQWDML+Y LYSG  P IL HHL+LL+CFTLALYRNVTINYLILTLICE         
Sbjct: 127 AYDQWDMLQYRLYSGLIPGILVHHLLLLVCFTLALYRNVTINYLILTLICE--------- 186

Query: 191 LNHLILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILI 250
                      LHS+FLHVRKVRRMAGIR ++S IV+ EW LNW+TFF AR+  H LI I
Sbjct: 187 -----------LHSIFLHVRKVRRMAGIRDSKSRIVRVEWVLNWITFFLARIASHLLITI 246

Query: 251 KLVIDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKSP 298
           KL+ DA KF+K G+ELPLALFGM GMNLLNI LGID+  A+KREK+P
Sbjct: 247 KLIRDASKFEK-GIELPLALFGMAGMNLLNISLGIDLFNAFKREKNP 272
[Close]
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Match: A0A059BZ38_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04350 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 1.800e-97
Identity = 184/290 (63.45%), Postives = 216/290 (74.48%), Query Frame = 1 

		  

Query: 16  SKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFVNT 75
           ++AG FF+ATL++W +SV +EI FN + ELL V+ GC F+Q ANWV+R  VSR+PLFVNT
Sbjct: 12  NRAGAFFLATLILWLVSVLFEIAFNGRTELLSVLAGCCFYQAANWVVRSRVSRDPLFVNT 71

Query: 76  VVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYDQW 135
            VSLLH++  S SVVFIL+N W       +F+H  LV  TWPWAY ALCFSCGYFAYDQW
Sbjct: 72  AVSLLHATVTSSSVVFILLNLWLKDGYKDIFEHSRLVGATWPWAYRALCFSCGYFAYDQW 131

Query: 136 DMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNHLI 195
           DML+Y LYSGW PSIL HHLILL+CFTLALYRNVTINYLILTLICE              
Sbjct: 132 DMLQYRLYSGWIPSILVHHLILLICFTLALYRNVTINYLILTLICE-------------- 191

Query: 196 LTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLVID 255
                 +HS+FLH+RKVRRMAGIR A+S +VK EW LNW++FF AR+  H  I  KL+ID
Sbjct: 192 ------IHSIFLHMRKVRRMAGIRDAKSVVVKIEWVLNWVSFFVARLAAHVFITAKLIID 251

Query: 256 APKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKRE--KSPLNHHND 304
           A KFDK G+ELPLALFGM GMN+LNIGLGID+ GA+KRE   S  NH  D
Sbjct: 252 ASKFDK-GIELPLALFGMAGMNMLNIGLGIDLFGAFKREMWTSKSNHRRD 280
[Close]
BLAST of Spo23713.1 vs. TAIR (Arabidopsis)
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 350.9 bits (899), Expect = 7.800e-97
Identity = 177/283 (62.54%), Postives = 212/283 (74.91%), Query Frame = 1 

		  

Query: 14  RRSKAGDFFMATLVIWALSVGYEIVFNNKKELLPVVYGCLFFQIANWVLRFWVSREPLFV 73
           +++ AG FF+ATL++W +SV +EI FN + ELL V+ G  FFQ+ NWV+R W+SR+P+FV
Sbjct: 12  KKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFV 71

Query: 74  NTVVSLLHSSFASVSVVFILVNQWSAKHSIQMFDHEELVRNTWPWAYTALCFSCGYFAYD 133
           NT VSLLHS   S SVVFIL+NQ  AK   +MFDH ELV  TW WAY ALCFSCGYFAYD
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYD 131

Query: 134 QWDMLKYELYSGWFPSILAHHLILLLCFTLALYRNVTINYLILTLICEFYDSPLSLDLNH 193
           QWDML+Y LYSG  PSIL HHL+LL+CFTLALYRNVTINYLILTLICE            
Sbjct: 132 QWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICE------------ 191

Query: 194 LILTVIKQLHSVFLHVRKVRRMAGIRSAESTIVKAEWFLNWLTFFFARVLPHALILIKLV 253
                   +HS+FLHVRK+RRMAGIR + + +VK EW LNW  F FAR +PH LI IKL+
Sbjct: 192 --------MHSIFLHVRKLRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLI 251

Query: 254 IDAPKFDKGGVELPLALFGMIGMNLLNIGLGIDILGAYKREKS 297
            DA KF K GVELPLAL GM GMN+LN+GLG+D+  A++RE+S
Sbjct: 252 KDAHKFGK-GVELPLALSGMAGMNILNVGLGLDLFHAFRRERS 273
The following BLAST results are available for this feature:
BLAST of Spo23713.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902236718|gb|KNA24516.1|8.9e-14392.1hypothetical protein SOVF_0151... [more]
gi|731361567|ref|XP_010692424.1|5.2e-12778.6PREDICTED: uncharacterized pro... [more]
gi|731361569|ref|XP_010692425.1|3.4e-12678.2PREDICTED: TLC domain-containi... [more]
gi|658007195|ref|XP_008338773.1|1.4e-10065.6PREDICTED: uncharacterized pro... [more]
gi|658051625|ref|XP_008361548.1|5.5e-10065.2PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo23713.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RYC0_SPIOL6.2e-14392.1Uncharacterized protein OS=Spi... [more]
A0A0J8BJJ0_BETVU2.4e-12678.2Uncharacterized protein OS=Bet... [more]
V4T7I8_9ROSI6.1e-9864.8Uncharacterized protein OS=Cit... [more]
A0A067GLX8_CITSI6.1e-9864.8Uncharacterized protein OS=Cit... [more]
A0A059BZ38_EUCGR1.8e-9763.4Uncharacterized protein OS=Euc... [more]
back to top
BLAST of Spo23713.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo23713.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G21790.17.8e-9762.5TRAM, LAG1 and CLN8 (TLC) lipi... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 72..281
score: 5.1
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 67..293
score: 1.2
IPR006634TRAM/LAG1/CLN8 homology domainPROFILEPS50922TLCcoord: 67..274
score: 10
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 18..181
score: 2.5E-89coord: 202..303
score: 2.5
NoneNo IPR availablePANTHERPTHR13439:SF4PROTEIN K12H6.6, ISOFORM B-RELATEDcoord: 18..181
score: 2.5E-89coord: 202..303
score: 2.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
biological_process GO:0006606 protein import into nucleus
biological_process GO:0002098 tRNA wobble uridine modification
biological_process GO:0006950 response to stress
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0070291 N-acylethanolamine metabolic process
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0051604 protein maturation
biological_process GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006516 glycoprotein catabolic process
biological_process GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006571 tyrosine biosynthetic process
biological_process GO:0000162 tryptophan biosynthetic process
biological_process GO:0006567 threonine catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009308 amine metabolic process
biological_process GO:0042752 regulation of circadian rhythm
biological_process GO:0018279 protein N-linked glycosylation via asparagine
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0048868 pollen tube development
biological_process GO:0009658 chloroplast organization
biological_process GO:0006364 rRNA processing
biological_process GO:0006378 mRNA polyadenylation
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006338 chromatin remodeling
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009094 L-phenylalanine biosynthetic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0006412 translation
biological_process GO:0006260 DNA replication
biological_process GO:0016311 dephosphorylation
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009717 isoflavonoid biosynthetic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0006508 proteolysis
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0016042 lipid catabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009649 entrainment of circadian clock
biological_process GO:0042753 positive regulation of circadian rhythm
biological_process GO:0009585 red, far-red light phototransduction
biological_process GO:0030488 tRNA methylation
biological_process GO:0001510 RNA methylation
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0033614 chloroplast proton-transporting ATP synthase complex assembly
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0019674 NAD metabolic process
biological_process GO:0006741 NADP biosynthetic process
biological_process GO:0070475 rRNA base methylation
biological_process GO:0006396 RNA processing
biological_process GO:0006769 nicotinamide metabolic process
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0010114 response to red light
biological_process GO:0009909 regulation of flower development
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005829 cytosol
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005950 anthranilate synthase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0005730 nucleolus
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0030687 preribosome, large subunit precursor
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016020 membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0005840 ribosome
cellular_component GO:0005773 vacuole
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0031011 Ino80 complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005849 mRNA cleavage factor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009505 plant-type cell wall
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0003951 NAD+ kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0004034 aldose 1-epimerase activity
molecular_function GO:0052689 carboxylic ester hydrolase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0004806 triglyceride lipase activity
molecular_function GO:0033987 2-hydroxyisoflavanone dehydratase activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0009982 pseudouridine synthase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003729 mRNA binding
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004560 alpha-L-fucosidase activity
molecular_function GO:0004022 alcohol dehydrogenase (NAD) activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043021 ribonucleoprotein complex binding
molecular_function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function GO:0047412 N-(long-chain-acyl)ethanolamine deacylase activity
molecular_function GO:0004049 anthranilate synthase activity
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004712 protein serine/threonine/tyrosine kinase activity
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
molecular_function GO:0004672 protein kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo101650.78Barchart | Table
Spo156310.75Barchart | Table
Spo044970.75Barchart | Table
Spo244160.75Barchart | Table
Spo029360.75Barchart | Table
Spo026010.74Barchart | Table
Spo199020.74Barchart | Table
Spo232980.74Barchart | Table
Spo212070.73Barchart | Table
Spo238290.72Barchart | Table
Spo018060.72Barchart | Table
Spo250030.72Barchart | Table
Spo113330.72Barchart | Table
Spo165590.71Barchart | Table
Spo156150.71Barchart | Table
Spo025180.71Barchart | Table
Spo197480.70Barchart | Table
Spo176210.70Barchart | Table
Spo087670.70Barchart | Table
Spo206990.70Barchart | Table
Spo247850.70Barchart | Table
Spo127350.70Barchart | Table
Spo170800.70Barchart | Table
Spo108630.69Barchart | Table
Spo126990.69Barchart | Table
Spo030620.69Barchart | Table
Spo270400.68Barchart | Table
Spo032100.68Barchart | Table
Spo109540.68Barchart | Table
Spo111950.68Barchart | Table
Spo147570.68Barchart | Table
Spo182200.68Barchart | Table
Spo214730.68Barchart | Table
Spo220230.68Barchart | Table
Spo159340.67Barchart | Table
Spo161360.67Barchart | Table
Spo071710.67Barchart | Table
Spo180960.67Barchart | Table
Spo191780.67Barchart | Table
Spo067170.67Barchart | Table
Spo251910.67Barchart | Table
Spo003600.67Barchart | Table
Spo030070.67Barchart | Table
Spo022850.67Barchart | Table
Spo017030.67Barchart | Table
Spo157310.67Barchart | Table
Spo060050.66Barchart | Table
Spo116260.66Barchart | Table
Spo226340.66Barchart | Table
Spo250460.66Barchart | Table
Spo030060.66Barchart | Table
Spo200520.66Barchart | Table
Spo045380.66Barchart | Table
Spo208960.66Barchart | Table
Spo209890.66Barchart | Table
Spo128770.66Barchart | Table
Spo122820.66Barchart | Table
Spo168350.66Barchart | Table
Spo168570.66Barchart | Table
Spo201010.65Barchart | Table
Spo006570.65Barchart | Table
Spo248750.65Barchart | Table
Spo151330.65Barchart | Table
Spo037390.65Barchart | Table