Spo23749 (gene)

Overview
NameSpo23749
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionZinc ion-binding protein
Locationchr2 : 53259101 .. 53261472 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGACGGCCTACCCACTTATTCTCTTTCTCTCTCTTCTCTTTAATTTTCTCTTTCTCTCTCTTCAATTCTCTTTTTTTTCTTCCTTTCTCTCTCTCAAATGATCATACGAGGAAGATGATGATCACCAAAACACAAAATTATGAATGTTGCATGTGTGGAGACCATGGCCTTTCTTATGAACTCTTTCGTTGCAAAGTTTGTCATTTCAGATCTCAACACAGGTATTTATCTGTTTCTCTGTGGATTCGATCTTTACTTCTGCGTTCTATCAGAAATCTCTCAAAAGGGTTTTGAATCTAATAATAATACCAATAATAATATAGTTTAATTAACTTTAATTAGAAGGATTAGTGTAATATGAGTTACAAATGGGACAGTAGATTCGAACCTGAAAAATATTATCGTACACAGACCCTTCAGTTTTAACCACTAGGCTAAAACTTTCACTGGGGTTATTTGATTCTTCTTGTAAATCTAATTCAAGTTTATTAATTAATATTTCAAGTTAATTAGTGATTCAAGAAATTAAAGCCTTTGGAGCTAGATCGATGTTATCAAAAATTGCATGAATATGAGTGATATAGATTAATAATGGCTCTCAAAATGATGAGCTTCTTAATTAATTAAATTAAACTAATTTGTTTTTATTATCTTTATTTTATTTAATTAATTATCTAATTTAATTTGTGATTTTCTTTTCTTGGGATGATATTATTATAGGTATTGTAGCAATCTATACCCAAAAGCGGAATCATATAGAGTATGCAATTGGTGCCTAATTCAAAAGGATAATGATAATTATCATCAACAAGAAATTACTCCCACTTCCACCACAACAACAACATCAAATAATTCCAACTCTCCTTCACAAACAAGGCCTACAAAGAAGTTCATCAACAACAATAACAACAACAACAATGTTTTCGGGCCGAAAATCGGCAACGGGGCCAAAAACTTGAAGCCTATAAGCCCAATAAAGAAGCCCGACAAGATACCGGAAACTCGATCGCCTTCGGGCCGTAAAAGGATCATCAACGGAGGAGGCCCGGCCCATGTTGAAGAGAAGTTGAGGAGGACCAAGTCAGAAGAAGTGTCAAACAATAATAATTCAAGTGGTAGTAGTAGAAGTAGTGGTGGCGCCGCCGGCGGCGGTGGTGGTGGGCCAGCTGTTATCAAACATGTCTTTAGAAACAAGGTGAGAAGGTATAAGCTTTTGGATGAGGTTTCTAGTTGACATTTCTACATAATTAACTTCTTTAATTATCAAATACTAAGTAAAATTACTATTAATTAATAAGTACTTAATATCGTAATTATCTTCTACTTCGTAACTTTTTTTTTTTAGCGAATGAGCCACAAGATCAATATAAATCATAAATAAGATCGGGATTCGAACTTGAGAACTATCAACACAACCACTCAGTCTTAATCATTAGGTTAAGGCCTCAATTGATGTAATTATCGTCTAGCTAGCTCCCACAAATATACTTGTGGGATAATTTCGGATTTTCTTTTTTATTTTTATTTTCTAGATCAAAGAAATGGAGAAAAGAATTATGAGGAAGTAAGAGAAGGTTCAATGAATGGAACATCTTGATAACGTACGTATTGTAAATGTATGGGAATCCGAGTTTTGAGATATTTTTTTTAAATCTATATATCTAAACTAAGGGATTCTATATTTTTCAGCTGTCTTTTTCTCTTTTGTTTTCATAAATTATTTATTTAAATTTCGAGTATTTGTTGTACTATAAATCTATCATCCCATGCAACCAAAAAAATTTATTTTTTTAATATTTGGTTGCATGGGATATTGATTAACGTGCCATAATGCATGCATATTACGGAGTATAAATCTAACCCATGCCTTCTTTAAATGAGTACAAAAACTAACATTATTTCTATGAAATTTAGGCTCGGCTATGTTCATAAGTTTAGATAAGATACATAAGAAACATTAGTTATCGAACATAATGTATAACTAAATAAATTTTGGTAAGTTTTAATAAATTTTCAGTCAAGTTCGGATAAAATAAGTTTATTAAATTAAGTAAAGATCGAATAAATCACATTCTTAACTTTATCACATTAGTTAGAGATGGGAGATTTTAATCTTGTTTTTGAGTAGTTATTTCGTCTATATTTGTTGCACGTAGTATAAAAGTCAAACGAAAACTTGTGAGCATAAAATATTGTACGTACTAATGTAAATGTATGTACTTCTTAAGTTCTTTTCATCTCTCTAAGGATACATTCGTTCGAAATGAAACTAATAATATATGCTTACTTCCCTCCAAAATAACACACCACAATATCGTGATTGATTCACTTATTCGAGAAAAGTGATATATTTAGGAATGAAGGAAATATAT

mRNA sequence

GGACGGCCTACCCACTTATTCTCTTTCTCTCTCTTCTCTTTAATTTTCTCTTTCTCTCTCTTCAATTCTCTTTTTTTTCTTCCTTTCTCTCTCTCAAATGATCATACGAGGAAGATGATGATCACCAAAACACAAAATTATGAATGTTGCATGTGTGGAGACCATGGCCTTTCTTATGAACTCTTTCGTTGCAAAGTTTGTCATTTCAGATCTCAACACAGGTATTGTAGCAATCTATACCCAAAAGCGGAATCATATAGAGTATGCAATTGGTGCCTAATTCAAAAGGATAATGATAATTATCATCAACAAGAAATTACTCCCACTTCCACCACAACAACAACATCAAATAATTCCAACTCTCCTTCACAAACAAGGCCTACAAAGAAGTTCATCAACAACAATAACAACAACAACAATGTTTTCGGGCCGAAAATCGGCAACGGGGCCAAAAACTTGAAGCCTATAAGCCCAATAAAGAAGCCCGACAAGATACCGGAAACTCGATCGCCTTCGGGCCGTAAAAGGATCATCAACGGAGGAGGCCCGGCCCATGTTGAAGAGAAGTTGAGGAGGACCAAGTCAGAAGAAGTGTCAAACAATAATAATTCAAGTGGTAGTAGTAGAAGTAGTGGTGGCGCCGCCGGCGGCGGTGGTGGTGGGCCAGCTGTTATCAAACATGTCTTTAGAAACAAGGTGAGAAGGTATAAGCTTTTGGATGAGGTTTCTAGTTGACATTTCTACATAATTAACTTCTTTAATTATCAAATACTAAGTAAAATTACTATTAATTAATAAGTACTTAATATCGTAATTATCTTCTACTTCGTAACTTTTTTTTTTTAGCGAATGAGCCACAAGATCAATATAAATCATAAATAAGATCGGGATTCGAACTTGAGAACTATCAACACAACCACTCAGTCTTAATCATTAGGTTAAGGCCTCAATTGATGTAATTATCGTCTAGCTAGCTCCCACAAATATACTTGTGGGATAATTTCGGATTTTCTTTTTTATTTTTATTTTCTAGATCAAAGAAATGGAGAAAAGAATTATGAGGAAGTAAGAGAAGGTTCAATGAATGGAACATCTTGATAACGTACGTATTGTAAATGTATGGGAATCCGAGTTTTGAGATATTTTTTTTAAATCTATATATCTAAACTAAGGGATTCTATATTTTTCAGCTGTCTTTTTCTCTTTTGTTTTCATAAATTATTTATTTAAATTTCGAGTATTTGTTGTACTATAAATCTATCATCCCATGCAACCAAAAAAATTTATTTTTTTAATATTTGGTTGCATGGGATATTGATTAACGTGCCATAATGCATGCATATTACGGAGTATAAATCTAACCCATGCCTTCTTTAAATGAGTACAAAAACTAACATTATTTCTATGAAATTTAGGCTCGGCTATGTTCATAAGTTTAGATAAGATACATAAGAAACATTCGTTCGAAATGAAACTAATAATATATGCTTACTTCCCTCCAAAATAACACACCACAATATCGTGATTGATTCACTTATTCGAGAAAAGTGATATATTTAGGAATGAAGGAAATATAT

Coding sequence (CDS)

ATGATGATCACCAAAACACAAAATTATGAATGTTGCATGTGTGGAGACCATGGCCTTTCTTATGAACTCTTTCGTTGCAAAGTTTGTCATTTCAGATCTCAACACAGGTATTGTAGCAATCTATACCCAAAAGCGGAATCATATAGAGTATGCAATTGGTGCCTAATTCAAAAGGATAATGATAATTATCATCAACAAGAAATTACTCCCACTTCCACCACAACAACAACATCAAATAATTCCAACTCTCCTTCACAAACAAGGCCTACAAAGAAGTTCATCAACAACAATAACAACAACAACAATGTTTTCGGGCCGAAAATCGGCAACGGGGCCAAAAACTTGAAGCCTATAAGCCCAATAAAGAAGCCCGACAAGATACCGGAAACTCGATCGCCTTCGGGCCGTAAAAGGATCATCAACGGAGGAGGCCCGGCCCATGTTGAAGAGAAGTTGAGGAGGACCAAGTCAGAAGAAGTGTCAAACAATAATAATTCAAGTGGTAGTAGTAGAAGTAGTGGTGGCGCCGCCGGCGGCGGTGGTGGTGGGCCAGCTGTTATCAAACATGTCTTTAGAAACAAGGTGAGAAGGTATAAGCTTTTGGATGAGGTTTCTAGTTGA

Protein sequence

MMITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPIKKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGGGGPAVIKHVFRNKVRRYKLLDEVSS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23749.1Spo23749.1mRNA


Homology
[Close]
BLAST of Spo23749.1 vs. NCBI nr
Match: gi|902228012|gb|KNA20927.1| (hypothetical protein SOVF_047920 [Spinacia oleracea])

HSP 1 Score: 411.0 bits (1055), Expect = 1.200e-111
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1 

		  

Query: 2   MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND 61
           MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND
Sbjct: 1   MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND 60

Query: 62  NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI 121
           NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI
Sbjct: 61  NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI 120

Query: 122 KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG 181
           KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG
Sbjct: 121 KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG 180

Query: 182 GGPAVIKHVFRNKVRRYKLLDEVSS 207
           GGPAVIKHVFRNKVRRYKLLDEVSS
Sbjct: 181 GGPAVIKHVFRNKVRRYKLLDEVSS 205
[Close]
BLAST of Spo23749.1 vs. NCBI nr
Match: gi|731312591|ref|XP_010675512.1| (PREDICTED: uncharacterized protein LOC104891503 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 240.4 bits (612), Expect = 2.900e-60
Identity = 138/213 (64.79%), Postives = 160/213 (75.12%), Query Frame = 1 

		  

Query: 1   MMITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDN 60
           M+  KTQNYECCMCGDHGL++ELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQK++
Sbjct: 1   MITNKTQNYECCMCGDHGLAHELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKED 60

Query: 61  DNYHQQEITPTSTTTTTSNNSNSPSQT-----RPTKKFINN-NNNNNNVFGPKIGN-GAK 120
              HQ+  T T+ T+  + +SNSPS         TK  I    +NN++V GPK G  GAK
Sbjct: 61  ---HQEIFTSTTPTSNNTISSNSPSSQDHHHHHLTKTTITKMKSNNHHVVGPKSGGVGAK 120

Query: 121 NLKPISPIKKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSS 180
           +L+P  PIKKP + PE  SPSGRKR+   G     +EKLRRTKSEE+SNNNN++ SS SS
Sbjct: 121 SLQPTIPIKKPGRSPEGSSPSGRKRM--NGPVTQDQEKLRRTKSEEISNNNNNNNSSSSS 180

Query: 181 GGAAGGGGGGPAVIKHVFRNKVRRYKLLDEVSS 207
              + G  GGPAVIKHVFRNKVRRYKLLDEVSS
Sbjct: 181 --RSSGRAGGPAVIKHVFRNKVRRYKLLDEVSS 206
[Close]
BLAST of Spo23749.1 vs. NCBI nr
Match: gi|224081999|ref|XP_002306550.1| (hypothetical protein POPTR_0005s17660g [Populus trichocarpa])

HSP 1 Score: 158.3 bits (399), Expect = 1.400e-35
Identity = 102/198 (51.52%), Postives = 123/198 (62.12%), Query Frame = 1 

		  

Query: 10  ECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEIT 69
           ECCMCGD GL +ELF+CKVC FRSQHRYCSNLYPKAESY+VCNWCL      ++  +E +
Sbjct: 16  ECCMCGDCGLPHELFQCKVCQFRSQHRYCSNLYPKAESYQVCNWCL------SHDTKEKS 75

Query: 70  PTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGP-KIGNGAKNLKPISPIKKPDKIP 129
             S+ +++SN +NS   +R  KK      N +N  GP K   G   L+  SPIKK  + P
Sbjct: 76  QNSSNSSSSNKNNSEDDSRNNKK-----KNGDNQAGPSKNHRGTLRLQINSPIKK-QRSP 135

Query: 130 ETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGGGGPAVIK 189
           E RSPS R+R+I  G    +EEKLRRT+SEE+SNN                        K
Sbjct: 136 E-RSPSTRRRLITNG---KLEEKLRRTRSEEMSNN---------------------GFTK 176

Query: 190 HVFRNKVRRYKLLDEVSS 207
            VFRNKVRRYKLLDEVSS
Sbjct: 196 QVFRNKVRRYKLLDEVSS 176
[Close]
BLAST of Spo23749.1 vs. NCBI nr
Match: gi|985440268|ref|XP_006472514.2| (PREDICTED: clustered-asparagine-rich protein-like [Citrus sinensis])

HSP 1 Score: 156.0 bits (393), Expect = 7.100e-35
Identity = 100/209 (47.85%), Postives = 124/209 (59.33%), Query Frame = 1 

		  

Query: 10  ECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEIT 69
           ECCMCGD+G+S ELFRCKVC FRSQHRYCSNLYPKAESY+VCNWCL Q+D     Q    
Sbjct: 29  ECCMCGDYGVSNELFRCKVCQFRSQHRYCSNLYPKAESYQVCNWCLSQRDEKEKSQNSSN 88

Query: 70  PTSTTTTTSNNSNSPSQTRPTKKFI--NNNNNNNNVFGPKIGNGAK------NLKPISPI 129
            +S+        +     +  KK    +NNNNNN V   K            N KPI   
Sbjct: 89  SSSSNKINGREEDDSKNVKNKKKNHDGSNNNNNNRVLLMKSQRSINLKLQQPNNKPIEKQ 148

Query: 130 KKPDKI--PETRSPSGRKRIINGGGPAHVEEK--LRRTKSEEVSNNNNSSGSSRSSGGAA 189
           + P+++  P T +P  RKRII  G    +EEK  ++R KSEE++NNNN++ +S S+    
Sbjct: 149 RSPERLPPPPTPTPRTRKRIITNGA---LEEKNLIKRKKSEEMANNNNNNNNSNSNNTVT 208

Query: 190 GGGGGGPAVIKHVFRNKVRRYKLLDEVSS 207
                   V +  FRNKVRRYKLLDEVSS
Sbjct: 209 -------PVRRPFFRNKVRRYKLLDEVSS 227
[Close]
BLAST of Spo23749.1 vs. NCBI nr
Match: gi|225459143|ref|XP_002285706.1| (PREDICTED: uncharacterized protein LOC100264219 [Vitis vinifera])

HSP 1 Score: 156.0 bits (393), Expect = 7.100e-35
Identity = 100/197 (50.76%), Postives = 118/197 (59.90%), Query Frame = 1 

		  

Query: 10  ECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEIT 69
           ECCMCGD+G SYELF+CKVC FRSQHRYCSNLYPKA+SYRVCNWCL QKD+      E T
Sbjct: 19  ECCMCGDYGFSYELFQCKVCQFRSQHRYCSNLYPKADSYRVCNWCLNQKDD----TPEKT 78

Query: 70  PTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPIKKPDKIPE 129
             S+ +++SN +N  +  R  KK I + ++       K   G+  L    PIKK  K PE
Sbjct: 79  QNSSNSSSSNKNNEENDGRIKKKKIGSGSH------AKAQRGSLQLPVSGPIKK-QKSPE 138

Query: 130 TRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGGGGPAVIKH 189
            RSP+ RKRII  G    +EE+L RT SE                        G  + KH
Sbjct: 139 -RSPTTRKRIIASG---CMEERLTRTNSE------------------------GSGITKH 176

Query: 190 VFRNKVRRYKLLDEVSS 207
           VFRNKVRRYKLLDEVSS
Sbjct: 199 VFRNKVRRYKLLDEVSS 176
[Close]
BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ00_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047920 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 8.600e-112
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1 

		  

Query: 2   MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND 61
           MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND
Sbjct: 1   MITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDND 60

Query: 62  NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI 121
           NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI
Sbjct: 61  NYHQQEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPISPI 120

Query: 122 KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG 181
           KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG
Sbjct: 121 KKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGG 180

Query: 182 GGPAVIKHVFRNKVRRYKLLDEVSS 207
           GGPAVIKHVFRNKVRRYKLLDEVSS
Sbjct: 181 GGPAVIKHVFRNKVRRYKLLDEVSS 205
[Close]
BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D5X8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g008150 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.000e-60
Identity = 138/213 (64.79%), Postives = 160/213 (75.12%), Query Frame = 1 

		  

Query: 1   MMITKTQNYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDN 60
           M+  KTQNYECCMCGDHGL++ELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQK++
Sbjct: 1   MITNKTQNYECCMCGDHGLAHELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKED 60

Query: 61  DNYHQQEITPTSTTTTTSNNSNSPSQT-----RPTKKFINN-NNNNNNVFGPKIGN-GAK 120
              HQ+  T T+ T+  + +SNSPS         TK  I    +NN++V GPK G  GAK
Sbjct: 61  ---HQEIFTSTTPTSNNTISSNSPSSQDHHHHHLTKTTITKMKSNNHHVVGPKSGGVGAK 120

Query: 121 NLKPISPIKKPDKIPETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSS 180
           +L+P  PIKKP + PE  SPSGRKR+   G     +EKLRRTKSEE+SNNNN++ SS SS
Sbjct: 121 SLQPTIPIKKPGRSPEGSSPSGRKRM--NGPVTQDQEKLRRTKSEEISNNNNNNNSSSSS 180

Query: 181 GGAAGGGGGGPAVIKHVFRNKVRRYKLLDEVSS 207
              + G  GGPAVIKHVFRNKVRRYKLLDEVSS
Sbjct: 181 --RSSGRAGGPAVIKHVFRNKVRRYKLLDEVSS 206
[Close]
BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Match: B9H6X5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s17660g PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.000e-35
Identity = 102/198 (51.52%), Postives = 123/198 (62.12%), Query Frame = 1 

		  

Query: 10  ECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEIT 69
           ECCMCGD GL +ELF+CKVC FRSQHRYCSNLYPKAESY+VCNWCL      ++  +E +
Sbjct: 16  ECCMCGDCGLPHELFQCKVCQFRSQHRYCSNLYPKAESYQVCNWCL------SHDTKEKS 75

Query: 70  PTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGP-KIGNGAKNLKPISPIKKPDKIP 129
             S+ +++SN +NS   +R  KK      N +N  GP K   G   L+  SPIKK  + P
Sbjct: 76  QNSSNSSSSNKNNSEDDSRNNKK-----KNGDNQAGPSKNHRGTLRLQINSPIKK-QRSP 135

Query: 130 ETRSPSGRKRIINGGGPAHVEEKLRRTKSEEVSNNNNSSGSSRSSGGAAGGGGGGPAVIK 189
           E RSPS R+R+I  G    +EEKLRRT+SEE+SNN                        K
Sbjct: 136 E-RSPSTRRRLITNG---KLEEKLRRTRSEEMSNN---------------------GFTK 176

Query: 190 HVFRNKVRRYKLLDEVSS 207
            VFRNKVRRYKLLDEVSS
Sbjct: 196 QVFRNKVRRYKLLDEVSS 176
[Close]
BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Match: A0A067LBF9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15861 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.400e-34
Identity = 98/202 (48.51%), Postives = 126/202 (62.38%), Query Frame = 1 

		  

Query: 8   NYECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQE 67
           N ECCMCGD GLSYELF+CK+CHFRSQHRYCSNLYPKAESY+VCNWCL      N  +++
Sbjct: 20  NPECCMCGDFGLSYELFQCKICHFRSQHRYCSNLYPKAESYQVCNWCL-----GNEGKEK 79

Query: 68  ITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKPI-SPIKKPDK 127
              +S +++++ NS+    ++  KK + N              G+  L+ I SPIKK  +
Sbjct: 80  SQNSSNSSSSNKNSSEDDSSKSIKKGVKNQ------------RGSLQLEVINSPIKK-QR 139

Query: 128 IPETRSPSGRKRIINGGGPAHVEEK--LRRTKSEEVSNNNNSSGSSRSSGGAAGGGGGGP 187
            PE    + R+R+I  G    +EEK  +RRTKSEE+SNNNN+S S+              
Sbjct: 140 SPERSPVTTRRRLITYG---KLEEKKLIRRTKSEEISNNNNNSNSN-------------G 187

Query: 188 AVIKHVFRNKVRRYKLLDEVSS 207
             I  VFRN+VRRYKLLDEVSS
Sbjct: 200 ITITQVFRNRVRRYKLLDEVSS 187
[Close]
BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Match: V4T1T4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002010mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.900e-34
Identity = 100/212 (47.17%), Postives = 125/212 (58.96%), Query Frame = 1 

		  

Query: 10  ECCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPKAESYRVCNWCLIQKDNDNYHQQEIT 69
           ECCMCGD+G+S ELFRCKVC FRSQHRYCSNLYPKAESY+VCNWCL Q+D  +  Q    
Sbjct: 97  ECCMCGDYGVSNELFRCKVCQFRSQHRYCSNLYPKAESYQVCNWCLSQRDEKDKSQNSSN 156

Query: 70  PTSTTTTTSNNSNSPSQTRPTKK-----FINNNNNNNNVFGPKIGNGAK------NLKPI 129
            +S+        +     +  KK       NNNNNNN V   K            N KPI
Sbjct: 157 SSSSNKINGREGDDSKNVKNKKKNHDSSNNNNNNNNNRVLLMKSQRSINLKLQQPNNKPI 216

Query: 130 SPIKKPDKI--PETRSPSGRKRIINGGGPAHVEEK--LRRTKSEEVSNNNNSSGSSRSSG 189
              + P+++  P T +P  RKRII  G    +EEK  ++R KSEE++NNNN++ S+ ++ 
Sbjct: 217 EKQRSPERLPPPPTPTPRTRKRIITNGA---LEEKNLIKRKKSEEMANNNNNNNSNSNNT 276

Query: 190 GAAGGGGGGPAVIKHVFRNKVRRYKLLDEVSS 207
                      V +  FRNKVRRYKLLDEVSS
Sbjct: 277 VT--------PVRRPFFRNKVRRYKLLDEVSS 297
[Close]
BLAST of Spo23749.1 vs. TAIR (Arabidopsis)
Match: AT1G02070.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.500e-6
Identity = 36/112 (32.14%), Postives = 53/112 (47.32%), Query Frame = 1 

		  

Query: 11  CCMCGDHGLSYELFRCKVCHFRSQHRYCSNLYPK-AESYRVCNWCLIQ----KDNDNYHQ 70
           CCMCGD G S +LF C  C  R QH YCSN Y + AE   +C+WC        +   +  
Sbjct: 5   CCMCGDVGFSDKLFSCGHCRCRFQHSYCSNYYGQFAEPTEICDWCRSDDRKLSNVARHGG 64

Query: 71  QEITPTSTTTTTSNNSNSPSQTRPTKKFINNNNNNNNVFGPKIGNGAKNLKP 118
                 S++    N+ ++ S+  P  +  +NNN ++ V     G+G     P
Sbjct: 65  SSSKKPSSSVKYENDFSNRSEYSPGHRIKHNNNRHDQVAKGVAGDGGGVTSP 116
The following BLAST results are available for this feature:
BLAST of Spo23749.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902228012|gb|KNA20927.1|1.2e-111100.hypothetical protein SOVF_0479... [more]
gi|731312591|ref|XP_010675512.1|2.9e-6064.7PREDICTED: uncharacterized pro... [more]
gi|224081999|ref|XP_002306550.1|1.4e-3551.5hypothetical protein POPTR_000... [more]
gi|985440268|ref|XP_006472514.2|7.1e-3547.8PREDICTED: clustered-asparagin... [more]
gi|225459143|ref|XP_002285706.1|7.1e-3550.7PREDICTED: uncharacterized pro... [more]
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BLAST of Spo23749.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RQ00_SPIOL8.6e-112100.Uncharacterized protein OS=Spi... [more]
A0A0J8D5X8_BETVU2.0e-6064.7Uncharacterized protein OS=Bet... [more]
B9H6X5_POPTR1.0e-3551.5Uncharacterized protein OS=Pop... [more]
A0A067LBF9_JATCU1.4e-3448.5Uncharacterized protein OS=Jat... [more]
V4T1T4_9ROSI1.9e-3447.1Uncharacterized protein OS=Cit... [more]
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BLAST of Spo23749.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23749.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G02070.12.5e-632.1unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33779FAMILY NOT NAMEDcoord: 184..206
score: 2.9E-52coord: 1..162
score: 2.9
NoneNo IPR availablePANTHERPTHR33779:SF1SUBFAMILY NOT NAMEDcoord: 1..162
score: 2.9E-52coord: 184..206
score: 2.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo194180.73Barchart | Table
Spo149830.68Barchart | Table
Spo081060.67Barchart | Table
Spo239550.66Barchart | Table
Spo247870.66Barchart | Table
Spo272910.66Barchart | Table