Spo23757 (gene)

Overview
NameSpo23757
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 53408002 .. 53408790 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCGGGGGGATTCGAACCTGAGAGTCTGAGACCTATCGTACACAGGCCCTCAGTCTTAACCACTAGGCCAAGACATCATTGGTACGAAGTATATTTTTTGATAGTTCGTTCTTTACTTTGTACTAGTTTTACGAGTATGTTTTAATAATTTGTGTATCAAGAAGACAAGAACTAATTGGTCCCTATCACCTGATTTCGACAAATTGTTCTTTGTATAATAAGAGAGAAGGAAATCCTCAAAGTTTTATAAATTTATCAAACATTATTCGAAATTTTCAATACTAAATATTTTAATTTTCATTATTAAGATTTGTCGCATTAGCCAAAAAACGATGAAGGACTGTCTGGTTCTCTTTAAAGAGAGATGTTTTTTTTTGAAATAAAAATGTGAAGATATGTTCTTTTTATATTAAAAAATGAATAAAATTGAGTAGATATCAATTTTTTTTTTCATCTCTAAAAAAATAATTAAATTGAGTAGATCAAAATTTCGATTAAAATTGAGTAGACCATTTTCCTTATAAAGAAATGTATTTCTTTTTGTAAATATTATTATTTGGGTAAATATTGTTTAAAAGCAATATTTGACCTGCCAAAGAGAATTGTAGTTGTAAGCAACATTTTGCTCTTCATTTCACCCTTTCCAGTTTGCAGCTTTCCATCCAAAAATCACTACGCTCAAATTCCCTTCATTTTCCCCCAATTTGAGAACCAAATAAGAAAATACAGAGAAAATAATTTCAGGAAAATCGAAAGTTTCCCAGAAATCGACCCCAGAATCTGA

mRNA sequence

ATGGGGGCGGGGGGATTCGAACCTGAGAGTCTGAGACCTATCGTACACAGGCCCTCAGTCTTAACCACTAGGCCAAGACATCATTGCTTTCCATCCAAAAATCACTACGCTCAAATTCCCTTCATTTTCCCCCAATTTGAGAACCAAATAAGAAAATACAGAGAAAATAATTTCAGGAAAATCGAAAGTTTCCCAGAAATCGACCCCAGAATCTGA

Coding sequence (CDS)

ATGGGGGCGGGGGGATTCGAACCTGAGAGTCTGAGACCTATCGTACACAGGCCCTCAGTCTTAACCACTAGGCCAAGACATCATTGCTTTCCATCCAAAAATCACTACGCTCAAATTCCCTTCATTTTCCCCCAATTTGAGAACCAAATAAGAAAATACAGAGAAAATAATTTCAGGAAAATCGAAAGTTTCCCAGAAATCGACCCCAGAATCTGA

Protein sequence

MGAGGFEPESLRPIVHRPSVLTTRPRHHCFPSKNHYAQIPFIFPQFENQIRKYRENNFRKIESFPEIDPRI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23757.1Spo23757.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23757.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23757.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23757.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23757.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009956 radial pattern formation
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0009407 toxin catabolic process
biological_process GO:0009723 response to ethylene
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0032502 developmental process
biological_process GO:0009987 cellular process
biological_process GO:0010015 root morphogenesis
biological_process GO:0009934 regulation of meristem structural organization
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0008361 regulation of cell size
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0048439 flower morphogenesis
biological_process GO:0010014 meristem initiation
biological_process GO:0009554 megasporogenesis
biological_process GO:0010305 leaf vascular tissue pattern formation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0016998 cell wall macromolecule catabolic process
biological_process GO:0009926 auxin polar transport
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006464 cellular protein modification process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0010024 phytochromobilin biosynthetic process
biological_process GO:0010227 floral organ abscission
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006788 heme oxidation
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0019530 taurine metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0006749 glutathione metabolic process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009617 response to bacterium
biological_process GO:0006417 regulation of translation
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009954 proximal/distal pattern formation
biological_process GO:0048481 plant ovule development
biological_process GO:0017148 negative regulation of translation
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009556 microsporogenesis
biological_process GO:0000165 MAPK cascade
biological_process GO:0010076 maintenance of floral meristem identity
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0052543 callose deposition in cell wall
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0006621 protein retention in ER lumen
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0009631 cold acclimation
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006364 rRNA processing
biological_process GO:0016556 mRNA modification
biological_process GO:0048767 root hair elongation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006605 protein targeting
biological_process GO:0009306 protein secretion
biological_process GO:0009657 plastid organization
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030091 protein repair
biological_process GO:0034599 cellular response to oxidative stress
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0032259 methylation
biological_process GO:0006449 regulation of translational termination
biological_process GO:0006468 protein phosphorylation
biological_process GO:0051083 'de novo' cotranslational protein folding
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0035265 organ growth
biological_process GO:0007020 microtubule nucleation
biological_process GO:0006032 chitin catabolic process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0044425 membrane part
cellular_component GO:0000785 chromatin
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0018444 translation release factor complex
cellular_component GO:0009523 photosystem II
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0005768 endosome
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0009295 nucleoid
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0004602 glutathione peroxidase activity
molecular_function GO:0004568 chitinase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0000900 translation repressor activity, mRNA regulatory element binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0020037 heme binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004392 heme oxygenase (decyclizing) activity
molecular_function GO:0016149 translation release factor activity, codon specific
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0070191 methionine-R-sulfoxide reductase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0046923 ER retention sequence binding
molecular_function GO:0043295 glutathione binding
molecular_function GO:0004363 glutathione synthase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0005488 binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0047800 cysteamine dioxygenase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo233320.77Barchart | Table
Spo116880.75Barchart | Table
Spo244300.74Barchart | Table
Spo128750.74Barchart | Table
Spo002050.74Barchart | Table
Spo084070.72Barchart | Table
Spo168440.72Barchart | Table
Spo002140.72Barchart | Table
Spo097690.71Barchart | Table
Spo108350.70Barchart | Table
Spo269750.70Barchart | Table
Spo232490.70Barchart | Table
Spo051250.70Barchart | Table
Spo201060.70Barchart | Table
Spo090080.70Barchart | Table
Spo093870.70Barchart | Table
Spo218330.69Barchart | Table
Spo246970.69Barchart | Table
Spo009430.69Barchart | Table
Spo232370.69Barchart | Table
Spo063980.69Barchart | Table
Spo137830.69Barchart | Table
Spo182850.68Barchart | Table
Spo134430.68Barchart | Table
Spo139810.68Barchart | Table
Spo161860.68Barchart | Table
Spo177880.68Barchart | Table
Spo191230.68Barchart | Table
Spo200500.68Barchart | Table
Spo202640.68Barchart | Table
Spo021060.67Barchart | Table
Spo153170.67Barchart | Table
Spo259850.67Barchart | Table
Spo075480.67Barchart | Table
Spo190350.67Barchart | Table
Spo192880.67Barchart | Table
Spo263550.67Barchart | Table
Spo066370.67Barchart | Table
Spo209300.67Barchart | Table
Spo050840.67Barchart | Table
Spo044330.67Barchart | Table
Spo023960.67Barchart | Table
Spo233820.67Barchart | Table
Spo022320.67Barchart | Table
Spo121300.67Barchart | Table
Spo081820.67Barchart | Table
Spo182230.66Barchart | Table
Spo030660.66Barchart | Table
Spo232830.66Barchart | Table
Spo259870.66Barchart | Table
Spo244950.66Barchart | Table
Spo194570.66Barchart | Table
Spo243310.66Barchart | Table
Spo116680.66Barchart | Table
Spo229980.66Barchart | Table
Spo154610.66Barchart | Table
Spo155240.66Barchart | Table
Spo179800.66Barchart | Table
Spo101970.65Barchart | Table
Spo005260.65Barchart | Table
Spo129760.65Barchart | Table
Spo155310.65Barchart | Table
Spo251310.65Barchart | Table
Spo079150.65Barchart | Table
Spo103160.65Barchart | Table