Spo23787 (gene)

Overview
NameSpo23787
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 53968795 .. 53970601 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATGGTATATCGGTATCACTGAAATTTTTGATACCGGTTAGATTTTATTTTTGAAATATTTTCGGCAATGTTGGTGGTGAGTGGTGGCTGGTGGCGCTGAGTCATGGTATTGGTGGTAAGTGTGTGATGGTGGTGGTGAGTAAGGGCATATAAGTAACTACATTATTTTAGGCAGGTGTTTGTAGGGATTGTTAGTTTGTTATCGCCAAATAACACTTGATATTTATCCAACTTTCACTGTTCATTATCGGCCACCAAACAAAATGTACAATATACTTTGTACTTCGTATTATTTATAAGTTTAAACAAAATAACTGGAATAAAACAAAGTTTAAATAGCGGAGACATGGAGTAGTAGTGTAGTACTCCTATAAATATTGTTAGTGGATAAAATTAGCATTTAAAAACTCACGTGAGTTAATAGTTATATTGGCTCTTTCCAAAATTCAGTGGATAATAGAGTAAGATTATTGTACATTTTTATCTTTTTACACAAAAAGGTAGTCTTCTTCATCTTCTTCAGCCTTCACCAGTAAAATTCTCCAAAAAGCCGATTACTTTTACTGCTACGAGTATATAAAATTGAGCGGCAAATCCGGGAAAATAAAAGATTATTGGTGTCAATATCAATTCCGGTAAGTTTAACAGATCTATTTAATTTTATACTAATTTTGCTTAATTTATCCTGATTTTACTAATTAATGCTCATTAAATTCTGTCCCACAGAAAATCATAACCCAGGTTCAAAGAAAAGTGACCTTAAGCTAATCCCGAGTCATTAAATTAACTTATAATTAATTAGAGCCAGAAATAAACAAATAAAATTCCCCCTTTTTCCATTTTTACTTGAAAAAAAAAGCTGAGAACTTTCACTGTTTCTCTCTCTAAAAACCCATCTTCTGCTAGTTTTTCCATCTGGGTATTGTAAATTCCACTTCATTTTTACTTCTTTAACAAATGGGCATTTTCAATTTTTGATTTTTAAAATTGTTTTGCATCATTATTATTATTGCAGATCCCCCCTTTCTTTCCCTGTCATACTATTATTTGGATAGCGCGTATAAATTGGGACTCAAAATTTCAGTTTTCACACACAATATAATAAAAATTTATAAAGAGGAAAAAGGAGCTGAATTTATTTAATTTATTTATTTATTAATGGTGATAGAGCATTAAATGCAAAGCATGTAGTGCTTCTTTTGCACAACAATAGTAATTGCAGAGGTGATAGGAAAGTGAGTAGTGTAGTAATTAAAACTTAGTACTAATAAAGTTTGCGTTTCTTTAGATTTTGTTTTTCTTGTAATTACTCAGTCACCATATATATTCTCTAACGACTTCTTTTCATCAAAGAAATCTGTTTTTCTGATTCCTGGTTTTCTGGGTTTGCTGGATTTCCACTTTAGTGAAAACAATTAAAGAGGGAAAGATTGAAGAAGAAAAATCGCAAATTTTGAATTTCTGGGTTTTTTTACCCTTTCATTTCTGCTCAACTGGCTCAAACTTCAAATTCTCAGGTACTTTTTTTCTATTTTGTTTACAGAATAATCTGTCCTTTTCTGCTTAGACATTAGTATTCTGGAATAATATTAAGCTGATCTTGTTTGATTCTTTAAAAAAAAAATTCATTTTGATTTTTCTGGGAAATTTCAATTATTGCATTAGTATGAATTTCAATTGAACTATGTTTTGGTTAAGTAGTGGGTCAATCACAATGGGTTTTTTCCTGAATGAATTAATATTTTCTGGGTTCATTCAATTAGTGTTGATCTTAATTTTTATTTTTGTTTTAGTATGAGTGA

mRNA sequence

ATGACCATGTCTTCTTCATCTTCTTCAGCCTTCACCAGTAAAATTCTCCAAAAAGCCGATTACTTTTACTGCTACGAGTATATAAAATTGAGCGGCAAATCCGGGAAAATAAAAGATTATTGGTGTCAATATCAATTCCGAGCATTAAATGCAAAGCATGTAGTGCTTCTTTTGCACAACAATAGTAATTGCAGAGGTGATAGGAAATATGAGTGA

Coding sequence (CDS)

ATGACCATGTCTTCTTCATCTTCTTCAGCCTTCACCAGTAAAATTCTCCAAAAAGCCGATTACTTTTACTGCTACGAGTATATAAAATTGAGCGGCAAATCCGGGAAAATAAAAGATTATTGGTGTCAATATCAATTCCGAGCATTAAATGCAAAGCATGTAGTGCTTCTTTTGCACAACAATAGTAATTGCAGAGGTGATAGGAAATATGAGTGA

Protein sequence

MTMSSSSSSAFTSKILQKADYFYCYEYIKLSGKSGKIKDYWCQYQFRALNAKHVVLLLHNNSNCRGDRKYE
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23787.1Spo23787.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23787.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23787.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23787.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23787.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006865 amino acid transport
biological_process GO:0044070 regulation of anion transport
biological_process GO:0008152 metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009826 unidimensional cell growth
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0048765 root hair cell differentiation
biological_process GO:0034765 regulation of ion transmembrane transport
biological_process GO:1902476 chloride transmembrane transport
biological_process GO:0071555 cell wall organization
biological_process GO:0007155 cell adhesion
biological_process GO:0045010 actin nucleation
biological_process GO:0050896 response to stimulus
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006629 lipid metabolic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016020 membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009507 chloroplast
cellular_component GO:0034707 chloride channel complex
cellular_component GO:0009349 riboflavin synthase complex
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030554 adenyl nucleotide binding
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0052689 carboxylic ester hydrolase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0016987 sigma factor activity
molecular_function GO:0005247 voltage-gated chloride channel activity
molecular_function GO:0016788 hydrolase activity, acting on ester bonds
molecular_function GO:0005524 ATP binding
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0008375 acetylglucosaminyltransferase activity
molecular_function GO:0005515 protein binding
RNA-Seq Expression