Spo23844 (gene)

Overview
NameSpo23844
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 53903676 .. 53905479 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCCGTAATCTAGAGAAAGAATCAAAAGGGATATTTAAAAATAATTTATATGGTTGAGAAAGTATTTCTTGATGATGCTCTAGTTTAAAAATCACAGAACATAGTGAGATTGCAACAGTATGTTTCCCTTTTCAATTTCTCCTCAATCCCTCAAATCCATTTCACAGTTTTCCAGATTGTTAGATTGGATTTCACTCTGCATTTTTCTCTTTCCGTACCTTGACTCTCTTTTTTATTTATTTAAGGTTTAAACCTTAGCAAGTTTCCATCCTTTTAAACCAACTCTGTTGTATGCAATTTCAAGTCTTCGAAAAGTTTGTTGTAGTTGTTTCTTGTTTTTGGAGGGAGGCGATTATTTCCTACTTTCTTATACATGCTATCATTATTTGTTAACTTGTTAGGTTCTGGTTTTGGATCTTCAGTGCCTGGAAGCATGATTCTTAGAAAATTTAAATCATGAGCAGTTGATGCCAAGGTACCCTAGCATGGTTCTTTTCTTAGCAATTGATTTAGTCAATATTTTAGCTGAAAATATATGGATGATGTATAAGTGAGTATTAGTTGAAACTATATGGATGATGTACTAGTGAGCATTAGTCGATACTATATGGATGATGTACTAGTGCGCATTTGTTTTTCAGGAAGTTTTCTCGACATAAATTTATTTTGTATAGAAAAGTCTTGGCTATTCTGAAAATTGGGCAAAGTTTCTGAATAAGCATTAATCTTTAGAGAGAGAACTTGATAGCATTCTTCGGTTCTTCCATATGTAGGTCATATATTTTATTCAGTTGTGAAGTTGATGGCCTTTTACTGATTTCAGACATTTTTATTCAAGCAGGCTTGTATTTGTGCTTTAACGAGCAGAACAAAAGAACTCTTCTTAGGTCACATAGCGAGTGAAAGAAACGCCAGTGAAGGGGGACATGGCGAGTTCTGCTGTCAAAAGTTGAGTATTATTATTTTGTTTATAATAGACTTGTATATTTTAGAAATTATGGTGTTACTCCTTAAAGTTTTGAATATGTTTCTGATACAAAGCTGTAATTGGCAGGTAAATGTCGTTAAAGGTCTGAAGATGTACTGTGGTACACAATGACTGAAATTATATCTCAAAAGAATTGGTCATTGTTCTTAATATATCTGCTTTTTAGGGAGAGTATCTGGGGGAGGTTTAATTTCTTTCATTGTGTCATTTTTAGTCGTAAGACTGAATATTTAACAATAATGTAAATACAATTTTCTTTTTGACGAGTCTGTGACTAGGATAGAATGATCGTAAAGAGAACCTTGACCTTTTGTGGTACTAGATACCAGATAACATGCATATGAGGTGTAAGGAAAAAAATGTTCACGAGGAGTAGAGTTTTCATAGGGGGGAAGGGTGATTTGGCTTTTTAACGTTTCCTCCTTCACTGAACTCCTTAACTGAGAACAAGTTGTAACGTTGCCTCTTATTTATACCCCTTAAACTTTCTTATTGTCTATGGCTTTGGATGTTTGCTCCCTCTTGATAGGTGGGTTCGTGAGGGGATTATTGAAGAGAAACTTGCAACGGACTTGAATTCTTTTCAACTGGAGGTAAATTCTTTTGATTGTTTTCAATGTACTGGGAATTTAATCGTCTATATGCAAAAATACTTTTTGAGGTAATATTCAAGGATGCATATCGTCGTACTAATCTCATATCCATCATATGGCTTTGAAATATCTTATAGAACAATGAAAGCCTTCGAGTCGGACAAACAAAGCTTTCACAATTGTCATTTTGTAGCGTGGATCAAGAAATGCAATATTAG

mRNA sequence

ATGTTTGATGCCAAGGCTTGTATTTGTGCTTTAACGAGCAGAACAAAAGAACTCTTCTTAGGTCACATAGCGAGTGAAAGAAACGCCAGTGAAGGGGGACATGGCGAGTCTGAAGATGTACTGTGGTACACAATGACTGAAATTATATCTCAAAAGAATTGGTCATTGTTCTTAATATATCTGCTTTTTAGGGAGAGTATCTGGGGGAGGTGGGTTCGTGAGGGGATTATTGAAGAGAAACTTGCAACGGACTTGAATTCTTTTCAACTGGAGAACAATGAAAGCCTTCGAGTCGGACAAACAAAGCTTTCACAATTGTCATTTTGTAGCGTGGATCAAGAAATGCAATATTAG

Coding sequence (CDS)

ATGTTTGATGCCAAGGCTTGTATTTGTGCTTTAACGAGCAGAACAAAAGAACTCTTCTTAGGTCACATAGCGAGTGAAAGAAACGCCAGTGAAGGGGGACATGGCGAGTCTGAAGATGTACTGTGGTACACAATGACTGAAATTATATCTCAAAAGAATTGGTCATTGTTCTTAATATATCTGCTTTTTAGGGAGAGTATCTGGGGGAGGTGGGTTCGTGAGGGGATTATTGAAGAGAAACTTGCAACGGACTTGAATTCTTTTCAACTGGAGAACAATGAAAGCCTTCGAGTCGGACAAACAAAGCTTTCACAATTGTCATTTTGTAGCGTGGATCAAGAAATGCAATATTAG

Protein sequence

MFDAKACICALTSRTKELFLGHIASERNASEGGHGESEDVLWYTMTEIISQKNWSLFLIYLLFRESIWGRWVREGIIEEKLATDLNSFQLENNESLRVGQTKLSQLSFCSVDQEMQY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo23844.1Spo23844.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo23844.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23844.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23844.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo23844.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0010584 pollen exine formation
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0009742 brassinosteroid mediated signaling pathway
biological_process GO:0009932 cell tip growth
biological_process GO:0071555 cell wall organization
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009729 detection of brassinosteroid stimulus
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0060548 negative regulation of cell death
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048513 animal organ development
biological_process GO:0009911 positive regulation of flower development
biological_process GO:0010817 regulation of hormone levels
biological_process GO:1900140 regulation of seedling development
biological_process GO:0002237 response to molecule of bacterial origin
biological_process GO:0010224 response to UV-B
biological_process GO:0048767 root hair elongation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0048657 anther wall tapetum cell differentiation
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0007165 signal transduction
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008152 metabolic process
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0010229 inflorescence development
biological_process GO:0080178 5-carbamoylmethyl uridine residue modification
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0048366 leaf development
biological_process GO:0009933 meristem structural organization
biological_process GO:0016567 protein ubiquitination
biological_process GO:0048316 seed development
biological_process GO:0006400 tRNA modification
biological_process GO:0048825 cotyledon development
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0045176 apical protein localization
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0080110 sporopollenin biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000159 protein phosphatase type 2A complex
cellular_component GO:0005634 nucleus
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0044464 cell part
cellular_component GO:0010008 endosome membrane
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005770 late endosome
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0004871 obsolete signal transducer activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0019888 protein phosphatase regulator activity
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0045552 dihydrokaempferol 4-reductase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0017076 purine nucleotide binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005496 steroid binding
molecular_function GO:0004714 transmembrane receptor protein tyrosine kinase activity
molecular_function GO:0008233 peptidase activity
RNA-Seq Expression