Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATTACTAGTAAAAACAAAAAACAGACCAATAATAAAAATAAAAATCAAGAAAAATAAAAATGAAAAAGTTGTGGCTGAAATTTGCTATTCAATTTTCTTTGTATCCCCCACTCAAGCAGTAGCAGACATTACTAACCACTTATCCCCTTTCTTCTTCTCCAACCTTGCTCTGAAAATTTTCTCTCTCCTCCCATGTGGAGTCACCTGTGACTTCTCAATCCTATTGCTTTCATGTTCTTGTACCCCAAAATCATGGAGTTATAATTTCACCACCCTCAATTATCTTGATAAAGAAAGAAATTATACAATCATTAAACCCCCAAACCCACACACACAAATTAAAAACCCACCTAATCAAATGTCCTTTTTATTAAACTTACCATAATAAATACCAAAGATCTTCAAATTTTGCAGATTCCCCCTTTAGATGTATAAATAGGACTTTTTTTTAATTATTATTCTTTTTATTAATTGACAAAAAATTGCAGAAAAATGGTGGATGGGTGTACAATAGTATGGTTGAGGAGGGATCTAAGGGTAGAAGATAATCCAGCTTTAGCAGCAGCAGTGAGAGCAGGATCAGTAATTTGTGTTTTTATTTGGGCACCTGAAGAAGAAGGCCATTATTACCCAGGAAGAGTTTCAAGGTGGTGGTTGAAACATAGTTTAGCACAGCTTGATTCTTCTTTGAAAAGTCTTGGTACTTGTCTTGTTACCAAGAGATCTACTGATAGTATTTCCTCACTTATTGAGATTCTTAAGTCTACTGGTGCTTCTCAGCTCTTCTTCAATCATTTATATGGTAAAATTTTGAATTTTTTAAATTATATTTTTGCTTTTTGGTTGATTCTGTCACATGGGTTTTGTTGGGTGTTTTTTTAAATGGTTATTGATTGTTTTTGTTGGAATTTCATATTTGTTTATTGATTTGATTCATGGGTTTTGTTTATTTGTTTAAATAGAATTATGGGTTGTTTTTTATTTTAATGTAATTTATGATGTTGTAAGGGTTTTGGACCTTTTGGTTTGCTACTTTGCTATATTTGGTGTGATTTTAAGGGTTTTGTTGCAGTGAGCATGTTGTAAGGTTTCTGGTCATGTGATTGAATGATTGGCAGCTTTTTGTTCTTTGTGATGCCATTATTTACTTACCCCTTTGGGGTTATTGTTTAATCCATGACTTTGGTGGAATTAATTTGATGCTAAAGAAGGCAAATTTGCCTAATTGTGCACTCACATGCTAATCTTTAGCAAGTAATTTAAGCTTGGGTTTGGTAATGATGAATCTGTGTTTATGGAATGTGCACATCTGGGTCATACATGTGAATGTCTAAATTGTGGAAGCTGAGTTTACAGTTCTCTTTGTCTGTTGTTATCTGCATTACATCAGGAACACTGTCATAGAACTTTCTAGAAGCTATTCTGCAAGTAGTTGGATAGTCGAATTCTGATTTAACTGATTAATCTGATGTAAAGAGTACAAATTAATATCCCCTTTTCATTCTTCAATGATCAAGATCAAATAGCTCAACATAATTCACTTTTGTTTGACTATAACCTTGTGTTAGTTGATAGTTACATTCTGATTTCAGTGATTAAACTGATGTAAAAATTGCAACTTCATCAATTTAACTTGCATTCTCCTTTTAAGCAGCTCAATATAATTCACTTTGTTTGACTATAATCTTGTGTTAGCTTCTATATCATGTAGTCTGCTACTCTGCTTCTTCTGACTGGTTCAACAAACTGCATTCACTCTTTCTCATTTTTTGTCTGCAAAATTTGCAGATCCTCTGTCACTTGTTAGGGATCACCGTGCAAAAGAAGTATTAACAGCACATGGTATAACCGTGCGCTCCTTCAATGCTGATCTTCTGTATGAACCATGGGAAGTTGTTGACGAGACAGGCCAACCGTTTAATACCTTTACTTCTTTCTGGGAAAGATGCCTTAGCATGCCTTTTGATCCCGAGGCTCCACTTCTTCCACCTAAGAGGATAATCTCTGGTTAGTAATCCTTGATGAACATCCAAGTTCTTTGATTAAAAATAATTTGAAAGGTGATTTTCTATTACATTATACTAAAACAAACACCAGGAGTGACATGCGTCACTTCCTTTTCCTAGTGAAAAAATTTCCCTCCAATTTTTTTTTTTCCATTACTTTTTATGGAATAGATTCAGTATATTTGACTTAAACTTTATTAATCTTTTGAAAATCTATCAAAATCTTTTGTACTAACTTTATTTTCGAACAATTCTTTGTTACTCAAATATTTTATAAAATTGTCAAATATAATATTATTGTATAATACTCGTATCTGTTTGTGCACGGGACCTAATCTAGTTTTGTACTAATTTCATGCCTGCCATCAGGAGATATTTCGAAGTGCCCATCAGACACATTGGTATTTGAAGATGATTCAGAAAAAGGAAGTAATGCCTTACTTGCTAGAGCATGGTCACCTGGTTGGAGCAGTGCTGATAAAGCTTTAACCACTTTCGTCAATGGACCTTTGATTGAATACTCAGAGAATCGAAGAAAGGCTGATAGTGCAACAACCTCCTTTCTCTCTCCTCACCTTCACTTTGGAGAGGTCAGTGTACGAAAGGTCTTCCACCTAGTACGCATCAAGCAAGTCTCATGGGCAAATGAAGGGAACACAGCAGGTGACGAGAGTTGCAATTTGTTTCTGAAATCAATCGGTTTGAGAGAATACTCAAGATATATGAGCTTTAACCACCCGTATAGCCACGAGAGGCCTTTACTTGGGCACCTCAAGTTTTTCCCGTGGGTGGTGGATGAAAGCTACTTCAAGGCGTGGAGACAAGGTAGAACGGGTTATCCTTTGGTTGATGCTGGTATGAGAGAGTTGTGGGCTTCTGGTTGGCTACATGATAGAATACGGGTTGTTGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCATGGAGGTGGGGGATGAAGTACTTCTGGGATACCCTTTTGGATGCTGATCTTGAAAGTGATGCCCTTGGCTGGCAATATATAACGGGGACTCTCCCTGATGGCCGTGAGGTTGACCGAATAGATAATCCTCAGGTATCATACTACCAATTTGATGTTTTTGCTATGATTTAGCCATATATTGTAGGGAATTAAGGGGAATTATGTTACTTTTGTTTCTTTGACAAAGTTACTTTTTCACCTAATTAAAGTTCTAACAGACTAAGGCTTTGTTCTGTTCAAATTATTTTGACTTATTTCAGACAAAATAAGTTCAGATAAATCCAATTAAGTTAAGTTCAGATAACTTTAGATAAGTTCAATTAAGTTCAGATGAAAACATTAAGTTTTTTTCAGACATTTTCACACACTTATTTATTTTAGACAAAATAAGTTTTTTTCAGATAAAATAAGTTAAGATAAGTTGAAATAAGTTAAGATAAGTTCAGTTAATATAATTAAGTCCAATAGAACGGAACCTTAAGACCTTAAATTGAGAAAACAAGCATGAGAAATGTTGTGTACTTCTTTTCTGGATTAATCTTTGTCTTTCTAGTTTGAAGGCTACAAATTCGATCCAAACGGAGAATATGTAAGGCGGTGGCTCCCAGAACTTGCAAGGCTACCAACAGAATGGATCCATCACCCATGGAATGCCCCGGAATCCGTACTACAAGCTGCAGGGGTAGAGTTAGGGTCAAATTACCCACTTCCCATTGTAGGAATAGATGCAGCAAAAGTAAGACTCCAAGAAGCGCTTACAAGTATGTGGGAACAAGAAGCAGCTTACAGGGCATCTATTGAGAATGGGACAGAAGAAGGTCTCGGCGATTCTGCCGAATTTGCCCCTATTGAATTTCCTCAAGATTTACGGATGGATATTGATCGTGAACCCGCGAGGAACGGTAACAACCAAAATGAGGTTAACCGGCCCCGTCATGAGGACCAGATGGTGCCTAGCATCACCACAACCTTGTTTAGGGTTGATGATTATGAAACTTCTTCAGAGGTTCAACAACATTCAGTGGGAAATGTGAGAGCAGAGGTTCCAAGAAATCAAGGGGTTGAACAATCTCCAAGAAGAAATAATAATGTGATTCCACCACCACAACCACCACGGGTAAACATCACGTACGGGTTGCAGAATATAGAGATAGAAGAGTCTACAGCTGACTCATCAAGTACTTCTGGTGGTAGCCGGAGTAGTGGGGTGGTTCCTGTTTGGTCTCCTTCGAGTTCTACATTTGCAGATCAGTATATTAGTGATGAAGCGGGAATGGGACAAGGGTCCTCGTTTCTGCAGAGGCATCCACAATCGCACGAACTGGTGAATTGGAGACGGCTTTCTCAAACTGGGTAAGCCCTTAACTTTGTCATAACCTATTTGTCCTGAAAAATAATAATGATGGTGTGACCGATTCTGGTGTTTCAGGCACTTTTATGACCGTTAAGTAGAATCCTTCCTTGTCCACACTTTTATGCAACTGAACTGTTAGGCTCAGGCTCTGTTCTATTCGACTTATGTTGACTTATTTCAAACAAAATAAGTCCAGTTAAGTTAGTCTAGTTCAGTTCTGACAAAATAAGTCGAATGGAACGGAGCCTTTAATCTTAAATTGGGGCTTAGCCATTGTTTTTTAAAAAAACAACTTTTCACTACATTGGTATGAAACAGCTCCCGAGAGGCCGGATATATTCTTATGCACAGATGCAAATAAGTGTCAAATCACCACCACAATCCCAGACTATGAATAACTTCTCTTTAATCAGTAATTTTTTTTTTCTAAATGCTAATATTTTGCTGATGATTTTCTAAATACTAATATGGCAAATATGATCAACTTTCTATACAATTTTATTTGTTTGGTTAGGAAATTGGTTGTGGGAAGATAATGTATAAATCATGTTTTCCCCTTATTTTTTATATAGGACAATGCCGGAAAACAAACATGGAAAACAGTAATGGAAAAATAAAGATTAGAAGAAGGATATTGTTGAAGTTGTAGCTAGTTAATTGGAATTCTATCATGTGATAAACTGATCTAATGTATGAAATACCATGTCATTGACAGTTGAAATGGTTCTGGGAGAGCAGCCGAAGATAGAAATCTGTATATCCTAATGCAGTGATACTACTAAAATGCAAGTCATGGTTGGAGGCTCGGCTTGTTTATGTTTTATCTACATCTCGGTGTATTCACTGAATAGCAGACATTAAAACTCAGCTCGATTGATTGAAAATTGGCAGCTCTGCTTATGCCATTTTGGCTTATTAAAAAATATCAGCAGCTCTGCTTGTAATCCATTATAGTGTGTAGTTTTGCTGTATAGTTGTAGTTCGTTCCCTTTGCAGGGGGAAGAAGAAGAAGAAGAGTCATGATCATTGTAGGGATGTGTAGCCTTGAATAAATCCCAGGCTTGTACCATTTTCCTTATTGTGAAATATATTTGCTACTATATTGTCAATAATGCATGGTTCTTTGTTTTGCATCTCTGTGAATAAGAATCACTTCAGTTGCCTGATTTTCATATTGTTTCGATGATAGAACTATGGTAATGGTATTTACTAGAGAAACCCGT TTATTACTAGTAAAAACAAAAAACAGACCAATAATAAAAATAAAAATCAAGAAAAATAAAAATGAAAAAGTTGTGGCTGAAATTTGCTATTCAATTTTCTTTGTATCCCCCACTCAAGCAGTAGCAGACATTACTAACCACTTATCCCCTTTCTTCTTCTCCAACCTTGCTCTGAAAATTTTCTCTCTCCTCCCATGTGGAGTCACCTGTGACTTCTCAATCCTATTGCTTTCATGTTCTTGTACCCCAAAATCATGGAGTTATAATTTCACCACCCTCAATTATCTTGATAAAGAAAGAAATTATACAATCATTAAACCCCCAAACCCACACACACAAATTAAAAACCCACCTAATCAAATGTCCTTTTTATTAAACTTACCATAATAAATACCAAAGATCTTCAAATTTTGCAGATTCCCCCTTTAGATGTATAAATAGGACTTTTTTTTAATTATTATTCTTTTTATTAATTGACAAAAAATTGCAGAAAAATGGTGGATGGGTGTACAATAGTATGGTTGAGGAGGGATCTAAGGGTAGAAGATAATCCAGCTTTAGCAGCAGCAGTGAGAGCAGGATCAGTAATTTGTGTTTTTATTTGGGCACCTGAAGAAGAAGGCCATTATTACCCAGGAAGAGTTTCAAGGTGGTGGTTGAAACATAGTTTAGCACAGCTTGATTCTTCTTTGAAAAGTCTTGGTACTTGTCTTGTTACCAAGAGATCTACTGATAGTATTTCCTCACTTATTGAGATTCTTAAGTCTACTGGTGCTTCTCAGCTCTTCTTCAATCATTTATATGATCCTCTGTCACTTGTTAGGGATCACCGTGCAAAAGAAGTATTAACAGCACATGGTATAACCGTGCGCTCCTTCAATGCTGATCTTCTGTATGAACCATGGGAAGTTGTTGACGAGACAGGCCAACCGTTTAATACCTTTACTTCTTTCTGGGAAAGATGCCTTAGCATGCCTTTTGATCCCGAGGCTCCACTTCTTCCACCTAAGAGGATAATCTCTGGAGATATTTCGAAGTGCCCATCAGACACATTGGTATTTGAAGATGATTCAGAAAAAGGAAGTAATGCCTTACTTGCTAGAGCATGGTCACCTGGTTGGAGCAGTGCTGATAAAGCTTTAACCACTTTCGTCAATGGACCTTTGATTGAATACTCAGAGAATCGAAGAAAGGCTGATAGTGCAACAACCTCCTTTCTCTCTCCTCACCTTCACTTTGGAGAGGTCAGTGTACGAAAGGTCTTCCACCTAGTACGCATCAAGCAAGTCTCATGGGCAAATGAAGGGAACACAGCAGGTGACGAGAGTTGCAATTTGTTTCTGAAATCAATCGGTTTGAGAGAATACTCAAGATATATGAGCTTTAACCACCCGTATAGCCACGAGAGGCCTTTACTTGGGCACCTCAAGTTTTTCCCGTGGGTGGTGGATGAAAGCTACTTCAAGGCGTGGAGACAAGGTAGAACGGGTTATCCTTTGGTTGATGCTGGTATGAGAGAGTTGTGGGCTTCTGGTTGGCTACATGATAGAATACGGGTTGTTGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCATGGAGGTGGGGGATGAAGTACTTCTGGGATACCCTTTTGGATGCTGATCTTGAAAGTGATGCCCTTGGCTGGCAATATATAACGGGGACTCTCCCTGATGGCCGTGAGGTTGACCGAATAGATAATCCTCAGTTTGAAGGCTACAAATTCGATCCAAACGGAGAATATGTAAGGCGGTGGCTCCCAGAACTTGCAAGGCTACCAACAGAATGGATCCATCACCCATGGAATGCCCCGGAATCCGTACTACAAGCTGCAGGGGTAGAGTTAGGGTCAAATTACCCACTTCCCATTGTAGGAATAGATGCAGCAAAAGTAAGACTCCAAGAAGCGCTTACAAGTATGTGGGAACAAGAAGCAGCTTACAGGGCATCTATTGAGAATGGGACAGAAGAAGGTCTCGGCGATTCTGCCGAATTTGCCCCTATTGAATTTCCTCAAGATTTACGGATGGATATTGATCGTGAACCCGCGAGGAACGGTAACAACCAAAATGAGGTTAACCGGCCCCGTCATGAGGACCAGATGGTGCCTAGCATCACCACAACCTTGTTTAGGGTTGATGATTATGAAACTTCTTCAGAGGTTCAACAACATTCAGTGGGAAATGTGAGAGCAGAGGTTCCAAGAAATCAAGGGGTTGAACAATCTCCAAGAAGAAATAATAATGTGATTCCACCACCACAACCACCACGGGTAAACATCACGTACGGGTTGCAGAATATAGAGATAGAAGAGTCTACAGCTGACTCATCAAGTACTTCTGGTGGTAGCCGGAGTAGTGGGGTGGTTCCTGTTTGGTCTCCTTCGAGTTCTACATTTGCAGATCAGTATATTAGTGATGAAGCGGGAATGGGACAAGGGTCCTCGTTTCTGCAGAGGCATCCACAATCGCACGAACTGGTGAATTGGAGACGGCTTTCTCAAACTGGTTGAAATGGTTCTGGGAGAGCAGCCGAAGATAGAAATCTGTATATCCTAATGCAGTGATACTACTAAAATGCAAGTCATGGTTGGAGGCTCGGCTTGTTTATGTTTTATCTACATCTCGGTGTATTCACTGAATAGCAGACATTAAAACTCAGCTCGATTGATTGAAAATTGGCAGCTCTGCTTATGCCATTTTGGCTTATTAAAAAATATCAGCAGCTCTGCTTGTAATCCATTATAGTGTGTAGTTTTGCTGTATAGTTGTAGTTCGTTCCCTTTGCAGGGGGAAGAAGAAGAAGAAGAGTCATGATCATTGTAGGGATGTGTAGCCTTGAATAAATCCCAGGCTTGTACCATTTTCCTTATTGTGAAATATATTTGCTACTATATTGTCAATAATGCATGGTTCTTTGTTTTGCATCTCTGTGAATAAGAATCACTTCAGTTGCCTGATTTTCATATTGTTTCGATGATAGAACTATGGTAATGGTATTTACTAGAGAAACCCGT ATGGTGGATGGGTGTACAATAGTATGGTTGAGGAGGGATCTAAGGGTAGAAGATAATCCAGCTTTAGCAGCAGCAGTGAGAGCAGGATCAGTAATTTGTGTTTTTATTTGGGCACCTGAAGAAGAAGGCCATTATTACCCAGGAAGAGTTTCAAGGTGGTGGTTGAAACATAGTTTAGCACAGCTTGATTCTTCTTTGAAAAGTCTTGGTACTTGTCTTGTTACCAAGAGATCTACTGATAGTATTTCCTCACTTATTGAGATTCTTAAGTCTACTGGTGCTTCTCAGCTCTTCTTCAATCATTTATATGATCCTCTGTCACTTGTTAGGGATCACCGTGCAAAAGAAGTATTAACAGCACATGGTATAACCGTGCGCTCCTTCAATGCTGATCTTCTGTATGAACCATGGGAAGTTGTTGACGAGACAGGCCAACCGTTTAATACCTTTACTTCTTTCTGGGAAAGATGCCTTAGCATGCCTTTTGATCCCGAGGCTCCACTTCTTCCACCTAAGAGGATAATCTCTGGAGATATTTCGAAGTGCCCATCAGACACATTGGTATTTGAAGATGATTCAGAAAAAGGAAGTAATGCCTTACTTGCTAGAGCATGGTCACCTGGTTGGAGCAGTGCTGATAAAGCTTTAACCACTTTCGTCAATGGACCTTTGATTGAATACTCAGAGAATCGAAGAAAGGCTGATAGTGCAACAACCTCCTTTCTCTCTCCTCACCTTCACTTTGGAGAGGTCAGTGTACGAAAGGTCTTCCACCTAGTACGCATCAAGCAAGTCTCATGGGCAAATGAAGGGAACACAGCAGGTGACGAGAGTTGCAATTTGTTTCTGAAATCAATCGGTTTGAGAGAATACTCAAGATATATGAGCTTTAACCACCCGTATAGCCACGAGAGGCCTTTACTTGGGCACCTCAAGTTTTTCCCGTGGGTGGTGGATGAAAGCTACTTCAAGGCGTGGAGACAAGGTAGAACGGGTTATCCTTTGGTTGATGCTGGTATGAGAGAGTTGTGGGCTTCTGGTTGGCTACATGATAGAATACGGGTTGTTGTTTCTAGCTTCTTTGTGAAGGTTCTGCAACTTCCATGGAGGTGGGGGATGAAGTACTTCTGGGATACCCTTTTGGATGCTGATCTTGAAAGTGATGCCCTTGGCTGGCAATATATAACGGGGACTCTCCCTGATGGCCGTGAGGTTGACCGAATAGATAATCCTCAGTTTGAAGGCTACAAATTCGATCCAAACGGAGAATATGTAAGGCGGTGGCTCCCAGAACTTGCAAGGCTACCAACAGAATGGATCCATCACCCATGGAATGCCCCGGAATCCGTACTACAAGCTGCAGGGGTAGAGTTAGGGTCAAATTACCCACTTCCCATTGTAGGAATAGATGCAGCAAAAGTAAGACTCCAAGAAGCGCTTACAAGTATGTGGGAACAAGAAGCAGCTTACAGGGCATCTATTGAGAATGGGACAGAAGAAGGTCTCGGCGATTCTGCCGAATTTGCCCCTATTGAATTTCCTCAAGATTTACGGATGGATATTGATCGTGAACCCGCGAGGAACGGTAACAACCAAAATGAGGTTAACCGGCCCCGTCATGAGGACCAGATGGTGCCTAGCATCACCACAACCTTGTTTAGGGTTGATGATTATGAAACTTCTTCAGAGGTTCAACAACATTCAGTGGGAAATGTGAGAGCAGAGGTTCCAAGAAATCAAGGGGTTGAACAATCTCCAAGAAGAAATAATAATGTGATTCCACCACCACAACCACCACGGGTAAACATCACGTACGGGTTGCAGAATATAGAGATAGAAGAGTCTACAGCTGACTCATCAAGTACTTCTGGTGGTAGCCGGAGTAGTGGGGTGGTTCCTGTTTGGTCTCCTTCGAGTTCTACATTTGCAGATCAGTATATTAGTGATGAAGCGGGAATGGGACAAGGGTCCTCGTTTCTGCAGAGGCATCCACAATCGCACGAACTGGTGAATTGGAGACGGCTTTCTCAAACTGGTTGA MVDGCTIVWLRRDLRVEDNPALAAAVRAGSVICVFIWAPEEEGHYYPGRVSRWWLKHSLAQLDSSLKSLGTCLVTKRSTDSISSLIEILKSTGASQLFFNHLYDPLSLVRDHRAKEVLTAHGITVRSFNADLLYEPWEVVDETGQPFNTFTSFWERCLSMPFDPEAPLLPPKRIISGDISKCPSDTLVFEDDSEKGSNALLARAWSPGWSSADKALTTFVNGPLIEYSENRRKADSATTSFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNTAGDESCNLFLKSIGLREYSRYMSFNHPYSHERPLLGHLKFFPWVVDESYFKAWRQGRTGYPLVDAGMRELWASGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGTLPDGREVDRIDNPQFEGYKFDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGSNYPLPIVGIDAAKVRLQEALTSMWEQEAAYRASIENGTEEGLGDSAEFAPIEFPQDLRMDIDREPARNGNNQNEVNRPRHEDQMVPSITTTLFRVDDYETSSEVQQHSVGNVRAEVPRNQGVEQSPRRNNNVIPPPQPPRVNITYGLQNIEIEESTADSSSTSGGSRSSGVVPVWSPSSSTFADQYISDEAGMGQGSSFLQRHPQSHELVNWRRLSQTG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23854.1 vs. NCBI nr
Match: gi|902231168|gb|KNA22159.1| (hypothetical protein SOVF_036810 [Spinacia oleracea]) HSP 1 Score: 1401.3 bits (3626), Expect = 0.000e+0 Identity = 678/679 (99.85%), Postives = 678/679 (99.85%), Query Frame = 1
BLAST of Spo23854.1 vs. NCBI nr
Match: gi|731312802|ref|XP_010676482.1| (PREDICTED: cryptochrome-1 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 1228.4 bits (3177), Expect = 0.000e+0 Identity = 593/688 (86.19%), Postives = 634/688 (92.15%), Query Frame = 1
BLAST of Spo23854.1 vs. NCBI nr
Match: gi|731312800|ref|XP_010676474.1| (PREDICTED: cryptochrome-1 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 1228.4 bits (3177), Expect = 0.000e+0 Identity = 593/688 (86.19%), Postives = 634/688 (92.15%), Query Frame = 1
BLAST of Spo23854.1 vs. NCBI nr
Match: gi|340007733|gb|AEK26572.1| (cryptochrome 1.2 [Populus tremula]) HSP 1 Score: 1123.6 bits (2905), Expect = 0.000e+0 Identity = 539/688 (78.34%), Postives = 606/688 (88.08%), Query Frame = 1
BLAST of Spo23854.1 vs. NCBI nr
Match: gi|224063235|ref|XP_002301054.1| (cryptochrome 1 family protein [Populus trichocarpa]) HSP 1 Score: 1122.8 bits (2903), Expect = 0.000e+0 Identity = 539/688 (78.34%), Postives = 605/688 (87.94%), Query Frame = 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036810 PE=4 SV=1) HSP 1 Score: 1401.3 bits (3626), Expect = 0.000e+0 Identity = 678/679 (99.85%), Postives = 678/679 (99.85%), Query Frame = 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D131_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009090 PE=4 SV=1) HSP 1 Score: 1228.4 bits (3177), Expect = 0.000e+0 Identity = 593/688 (86.19%), Postives = 634/688 (92.15%), Query Frame = 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Match: G1FMC8_POPTN (Cryptochrome 1.2 OS=Populus tremula GN=CRY1.2 PE=4 SV=1) HSP 1 Score: 1123.6 bits (2905), Expect = 0.000e+0 Identity = 539/688 (78.34%), Postives = 606/688 (88.08%), Query Frame = 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Match: G1FMC7_POPTN (Cryptochrome 1.1 OS=Populus tremula GN=CRY1.1 PE=4 SV=1) HSP 1 Score: 1122.8 bits (2903), Expect = 0.000e+0 Identity = 539/688 (78.34%), Postives = 607/688 (88.23%), Query Frame = 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Match: B9GUW2_POPTR (Cryptochrome 1 family protein OS=Populus trichocarpa GN=POPTR_0002s09730g PE=4 SV=1) HSP 1 Score: 1122.8 bits (2903), Expect = 0.000e+0 Identity = 539/688 (78.34%), Postives = 605/688 (87.94%), Query Frame = 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Match: CRY1_ARATH (Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2) HSP 1 Score: 1066.2 bits (2756), Expect = 1.500e-310 Identity = 522/687 (75.98%), Postives = 591/687 (86.03%), Query Frame = 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Match: CRY2_ARATH (Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2) HSP 1 Score: 652.9 bits (1683), Expect = 3.800e-186 Identity = 301/511 (58.90%), Postives = 386/511 (75.54%), Query Frame = 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Match: CRY1_SINAL (Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 1.900e-172 Identity = 279/486 (57.41%), Postives = 360/486 (74.07%), Query Frame = 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Match: PHRA_AGRFC (Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=phrA PE=1 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.600e-89 Identity = 193/489 (39.47%), Postives = 263/489 (53.78%), Query Frame = 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Match: PHR_VIBCH (Deoxyribodipyrimidine photo-lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=phrA PE=1 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 5.200e-58 Identity = 146/459 (31.81%), Postives = 235/459 (51.20%), Query Frame = 1
BLAST of Spo23854.1 vs. TAIR (Arabidopsis)
Match: AT4G08920.1 (cryptochrome 1) HSP 1 Score: 1066.2 bits (2756), Expect = 8.200e-312 Identity = 522/687 (75.98%), Postives = 591/687 (86.03%), Query Frame = 1
BLAST of Spo23854.1 vs. TAIR (Arabidopsis)
Match: AT1G04400.2 (cryptochrome 2) HSP 1 Score: 652.9 bits (1683), Expect = 2.200e-187 Identity = 301/511 (58.90%), Postives = 386/511 (75.54%), Query Frame = 1
BLAST of Spo23854.1 vs. TAIR (Arabidopsis)
Match: AT3G15620.1 (DNA photolyase family protein) HSP 1 Score: 174.9 bits (442), Expect = 1.700e-43 Identity = 151/526 (28.71%), Postives = 243/526 (46.20%), Query Frame = 1
BLAST of Spo23854.1 vs. TAIR (Arabidopsis)
Match: AT5G24850.1 (cryptochrome 3) HSP 1 Score: 115.2 bits (287), Expect = 1.600e-25 Identity = 73/206 (35.44%), Postives = 103/206 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23854.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23854.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23854.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5 Position : 0 Zoom : x 1
BLAST of Spo23854.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29 Position : 0 Zoom : x 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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