Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACCAAAACAAAGGGTATCATTTCCTATCTATAAATAGACAAGTACTAAGCTCTTCATACTCATTCAAAAATAAGTGTTTACCCCTTCTTTGCAAAAACAACCAAAACCCATATATATATTTAAGTTTTTTCTTTGAGGAAACATGTCTGAGATGGAAATCCAAGCTCAAGTTGGTGATGAGAAGTTGATATTGGAGTTGGAGAACAATGCGGCCAACGAGAGTGACAGCATCCAACTAAGGTCGTCAGACTCAAGTCAAGTGGTGTTGTACACAACCACCGCAAACTATAGCAAAAGTGCCCGATTACATACAATTGATAGGCACTTTTGGTCTGGTCGTGCACTTACAAACTTCCCTGCTCTTCCAAAAGGGTACTATGCCGTTCCTAGGCAACAAGGTACTCTTCCTCAAGGTGTCAAATGGGGCATCGTCTATGCTGATGGTGATGACACCACTGCTCGTAAGTGGGTTGTGGCTTTTGATACCGCTACCGGCAAGGTATGTAAATTTATTAATTTAGAAATGACACATGTCACTTCCTGGTACCAAAATTTACCCTTCACAAACTTTTATCCTAAAATCTACTTTATTTACTTTTAAAATTTTCAATCATATCTTTTTATAATTGTTTATGTAGATTATGGAATTATAGACGCCATATAATAATAATTTGCTAAAATTAATTTTTGATAATATTCTAGTCAAGTCGAAATAATGTAATGGAACAATATATTTACGGACTACTCAATATTTTGGTCAAATTAGCATATTAGTATATCGAATATTGACAAAGCGTATTAAGCATATAAAATACTACGTATCTACTAAGAGTAGGTAGAAAATTGCATGCTACTACGCAGATGATTAAATTAGCATTTTCAATATTTCTTAATTATGCAATACCTTTAAAGAGAAAAAAAGAATCCATTAAAAAATAGTTTAAATAAAATTAGATAATTTTAGAATATCAGTGTGTACGAAACCTAATCTAGAATATTATGTTTCTTAAGTACTCCTTTTATTCGTTTCATATTAGTCGACCATTATTAGCTTGTGATGAACGTTCTGATTTATTTGTTTCATAATTTTTTTTGAAGGCTTATGCTGAAGCTGGACCAATAGGCCCAGTCGACTGGAACGTTGTTGAGGTTAAATTGGGTATGTCTGGAAGCAAAAGCGAGTACACTGACCCAGCTCTCGGAGGCACGACCTCAGCTGAGATTAATGGACTTAATGCAAGAGCAATATTCCGTAATTGATTTGCTTAATTAAGATCATTACTACTACGTACTACTCTATGACATTATGTATCTTGCTTTTCCACATAATTTTATGTTATGTGATGTTTCCCGGTGAAAATGTTTTCATTTGTCATTCGGTAGAAATCTATAAATAAAGTGTGTTTTTCTTTTACATGTTTTCCTATCTATTTTTATACTATAAGTAATAAGTTATACAAAAAGAGATAAATATAATATCGAAAAAGTTCATAAAAAATGGAGTACTCCTTAATTAGCATACTCCAATCAATGGAGCACCATTGCCGCAACCAATACCACCGTCGTAGTGCACAACCATATTTCAGTAATATAAAAAATACACACCTAT AAACCAAAACAAAGGGTATCATTTCCTATCTATAAATAGACAAGTACTAAGCTCTTCATACTCATTCAAAAATAAGTGTTTACCCCTTCTTTGCAAAAACAACCAAAACCCATATATATATTTAAGTTTTTTCTTTGAGGAAACATGTCTGAGATGGAAATCCAAGCTCAAGTTGGTGATGAGAAGTTGATATTGGAGTTGGAGAACAATGCGGCCAACGAGAGTGACAGCATCCAACTAAGGTCGTCAGACTCAAGTCAAGTGGTGTTGTACACAACCACCGCAAACTATAGCAAAAGTGCCCGATTACATACAATTGATAGGCACTTTTGGTCTGGTCGTGCACTTACAAACTTCCCTGCTCTTCCAAAAGGGTACTATGCCGTTCCTAGGCAACAAGGTACTCTTCCTCAAGGTGTCAAATGGGGCATCGTCTATGCTGATGGTGATGACACCACTGCTCGTAAGTGGGTTGTGGCTTTTGATACCGCTACCGGCAAGGCTTATGCTGAAGCTGGACCAATAGGCCCAGTCGACTGGAACGTTGTTGAGGTTAAATTGGGTATGTCTGGAAGCAAAAGCGAGTACACTGACCCAGCTCTCGGAGGCACGACCTCAGCTGAGATTAATGGACTTAATGCAAGAGCAATATTCCGTAATTGATTTGCTTAATTAAGATCATTACTACTACGTACTACTCTATGACATTATGTATCTTGCTTTTCCACATAATTTTATGTTATGTGATGTTTCCCGGTGAAAATGTTTTCATTTGTCATTCGGTAGAAATCTATAAATAAAGTGTGTTTTTCTTTTACATGTTTTCCTATCTATTTTTATACTATAAGTAATAAGTTATACAAAAAGAGATAAATATAATATCGAAAAAGTTCATAAAAAATGGAGTACTCCTTAATTAGCATACTCCAATCAATGGAGCACCATTGCCGCAACCAATACCACCGTCGTAGTGCACAACCATATTTCAGTAATATAAAAAATACACACCTAT ATGTCTGAGATGGAAATCCAAGCTCAAGTTGGTGATGAGAAGTTGATATTGGAGTTGGAGAACAATGCGGCCAACGAGAGTGACAGCATCCAACTAAGGTCGTCAGACTCAAGTCAAGTGGTGTTGTACACAACCACCGCAAACTATAGCAAAAGTGCCCGATTACATACAATTGATAGGCACTTTTGGTCTGGTCGTGCACTTACAAACTTCCCTGCTCTTCCAAAAGGGTACTATGCCGTTCCTAGGCAACAAGGTACTCTTCCTCAAGGTGTCAAATGGGGCATCGTCTATGCTGATGGTGATGACACCACTGCTCGTAAGTGGGTTGTGGCTTTTGATACCGCTACCGGCAAGGCTTATGCTGAAGCTGGACCAATAGGCCCAGTCGACTGGAACGTTGTTGAGGTTAAATTGGGTATGTCTGGAAGCAAAAGCGAGTACACTGACCCAGCTCTCGGAGGCACGACCTCAGCTGAGATTAATGGACTTAATGCAAGAGCAATATTCCGTAATTGA MSEMEIQAQVGDEKLILELENNAANESDSIQLRSSDSSQVVLYTTTANYSKSARLHTIDRHFWSGRALTNFPALPKGYYAVPRQQGTLPQGVKWGIVYADGDDTTARKWVVAFDTATGKAYAEAGPIGPVDWNVVEVKLGMSGSKSEYTDPALGGTTSAEINGLNARAIFRN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo23862.1 vs. NCBI nr
Match: gi|902231156|gb|KNA22147.1| (hypothetical protein SOVF_036700 [Spinacia oleracea]) HSP 1 Score: 344.7 bits (883), Expect = 9.100e-92 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Spo23862.1 vs. NCBI nr
Match: gi|902136825|gb|KNA04477.1| (hypothetical protein SOVF_199370 [Spinacia oleracea]) HSP 1 Score: 322.4 bits (825), Expect = 4.800e-85 Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 1
BLAST of Spo23862.1 vs. NCBI nr
Match: gi|902231157|gb|KNA22148.1| (hypothetical protein SOVF_036710 [Spinacia oleracea]) HSP 1 Score: 308.5 bits (789), Expect = 7.200e-81 Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 1
BLAST of Spo23862.1 vs. NCBI nr
Match: gi|902177734|gb|KNA09003.1| (hypothetical protein SOVF_157630 [Spinacia oleracea]) HSP 1 Score: 230.3 bits (586), Expect = 2.500e-57 Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 1
BLAST of Spo23862.1 vs. NCBI nr
Match: gi|731324431|ref|XP_010672966.1| (PREDICTED: uncharacterized protein LOC104889442 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 172.2 bits (435), Expect = 8.000e-40 Identity = 93/161 (57.76%), Postives = 105/161 (65.22%), Query Frame = 1
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTL7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036700 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 6.300e-92 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QB17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_199370 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.400e-85 Identity = 163/173 (94.22%), Postives = 165/173 (95.38%), Query Frame = 1
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRR2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036710 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 5.000e-81 Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 1
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQN0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_157630 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 1.700e-57 Identity = 118/176 (67.05%), Postives = 135/176 (76.70%), Query Frame = 1
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT58_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062410 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 5.600e-40 Identity = 93/161 (57.76%), Postives = 105/161 (65.22%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23862.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23862.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23862.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo23862.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
RNA-Seq Expression
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