Spo23864 (gene) | SpinachBase

Overview


Name	Spo23864
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	E3 ubiquitin-protein ligase HUWE1, putative
Location	chr2 : 54247607 .. 54249556 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATAATATTAAATTCAAATTAAATTAAATGTGGGCCCACTAAAAATCCACCTTTAAATTTGCCCTCTTAGATTCTTTGCCTTTCTCCTTTCCCCTTTCCCTCCCTATTTAAGCACCAAAAACATTTACACACCCCCAACTTTATCTCCCTCTCTCTCTATCTCAACAACACAAACCCAGATAACTGAGTTTAATTCAGAGAAAGAAAAACAAACTCCCAACCATGGTATCATTTCAAGCACCTTTCCTCCGACTAAACGATCAACGAAACCCGATTTCCGAAACTACTAATAATGATAATAATGATATCAATAATTCCAAGAATATGAAAAGGAAGTGGGATGATGCAGAAGATGAGGCAGAGGAAGAGGTCATCCTTCCTTATAAACATTGGAGGAATCCCAAGGCGGCAACTGCTGTTGCCGCTTTCGCTACCAAATCTTTTTCAGATATCGAGCTTCACCTCGAGACTCCGTTGCCATCCGAATGGCAACGGTGCCTCGATATGCAGGTAAATTAAGTTAATTAAGTTTTTAAGCTAGTCTAAACCTCAATCTTAACCACTAGGAAAAGATATTATTAGTGTCCATTATTTATTTGTACATAATGGTACAAACAAGGTTGTCTTTATATATTGTTGTCAAAAAAAAAAAAAATTATATATATACTCTGTATTCGATCACCAAAAAACAATACTCCGTAACAAAAATTTATACTTATATAAAGTGGGTTTTCTTAGTTGGGGCCCTATGCGGTAGGGTTGTTTGCACTCCCTCAAAGACAGGCATGAAATTTTCTTTTTCTTTTTTCTCATAGTGAGAAAAATTGAACAGTTCTTAATTTTTTGTTTTTGTTTTGATGTTCTGAACATTTTTTGTTTTTTTTGCATGCAGTCAGGAGAAATACACTTCTACAACACAAGAACACAAAAAAGAACACAAAGAGATCCAAGAGAAAGAAGCACAGACCCACCAAGTCCTAGGGAATGTCACATGAGTTTAGACCTTGAGCTAAACCTGCCTTGTGGCTCACTCAACCACAATAATAATAATATCTCAAAATCAAAATCAACATCAGAAAAGAAGAGTCTTACAATGATGATCAAGAACAAGAAACCGAGCTACTCACCACCGCCTCCTCCGGTTACTCCTAATCTCTTCAGGAGTCTGAGCACCGCCGGAAACAACACCACCATCGACCTCGAAGCGGCGGACGAGGAAGCCGAGATGGTGGCTACCGCCTGCAATCGGTGCCATATGCTGGTGATGCTCTGCAAAACTTCACCAACATGCCCCAACTGCAAATATGTGCACCCACCTTGCCAGACCCTTCTTGACCTGTTCAAGCCAAGACTTAGCCTATCTTGTTAGTTTTTCTTATTAGTAACAGCAACATATGAATTGATGATGATCATAAGGTTGAGTGTTAATAGCTATTATTAGGCCCATAATAATAATAATACAAAAAATATTGTTTAGTATGCTGCAAAAAAAAAAAAAAAATCAATATAGAATCATGAGTAAGAATGATGTCAAATTTACTAGTTAGTTGGCTCCTTAATCATCATTTCTCTTCTTAATTAGTCAAAGTGCTCCGAAAACGGAAGTTTAATTATAACTAGAGTGTAAATATTATAGTTTTTGCATCGATTAAGTTTTTAATGACAATGGTAACTACTACAAAGAGATGGGCTAGCAATAATAGTCTAAGTAGTCATGTCTTTTGGTACTTTCTTCTCATCATACAAAAATAAATGGTGTACTACTACCATTATATCAACCGCAATTGGGTTTCTTCCCTATAAAAGGGAAAAAAGCGTATTAATACACACCCAACTCCCAACTAGCTAAACAACATTCATGACATTAGATGTATACATCCACCAAACACTTACCTGAAAACTGAATGAATGAGAGTGAGAGTTTATATGCATGTCCCTCTGAAAGAGAA

mRNA sequence

TAATAATATTAAATTCAAATTAAATTAAATGTGGGCCCACTAAAAATCCACCTTTAAATTTGCCCTCTTAGATTCTTTGCCTTTCTCCTTTCCCCTTTCCCTCCCTATTTAAGCACCAAAAACATTTACACACCCCCAACTTTATCTCCCTCTCTCTCTATCTCAACAACACAAACCCAGATAACTGAGTTTAATTCAGAGAAAGAAAAACAAACTCCCAACCATGGTATCATTTCAAGCACCTTTCCTCCGACTAAACGATCAACGAAACCCGATTTCCGAAACTACTAATAATGATAATAATGATATCAATAATTCCAAGAATATGAAAAGGAAGTGGGATGATGCAGAAGATGAGGCAGAGGAAGAGGTCATCCTTCCTTATAAACATTGGAGGAATCCCAAGGCGGCAACTGCTGTTGCCGCTTTCGCTACCAAATCTTTTTCAGATATCGAGCTTCACCTCGAGACTCCGTTGCCATCCGAATGGCAACGGTGCCTCGATATGCAGTCAGGAGAAATACACTTCTACAACACAAGAACACAAAAAAGAACACAAAGAGATCCAAGAGAAAGAAGCACAGACCCACCAAGTCCTAGGGAATGTCACATGAGTTTAGACCTTGAGCTAAACCTGCCTTGTGGCTCACTCAACCACAATAATAATAATATCTCAAAATCAAAATCAACATCAGAAAAGAAGAGTCTTACAATGATGATCAAGAACAAGAAACCGAGCTACTCACCACCGCCTCCTCCGGTTACTCCTAATCTCTTCAGGAGTCTGAGCACCGCCGGAAACAACACCACCATCGACCTCGAAGCGGCGGACGAGGAAGCCGAGATGGTGGCTACCGCCTGCAATCGGTGCCATATGCTGGTGATGCTCTGCAAAACTTCACCAACATGCCCCAACTGCAAATATGTGCACCCACCTTGCCAGACCCTTCTTGACCTGTTCAAGCCAAGACTTAGCCTATCTTGTTAGTTTTTCTTATTAGTAACAGCAACATATGAATTGATGATGATCATAAGGTTGAGTGTTAATAGCTATTATTAGGCCCATAATAATAATAATACAAAAAATATTGTTTAGTATGCTGCAAAAAAAAAAAAAAAATCAATATAGAATCATGAGTAAGAATGATGTCAAATTTACTAGTTAGTTGGCTCCTTAATCATCATTTCTCTTCTTAATTAGTCAAAGTGCTCCGAAAACGGAAGTTTAATTATAACTAGAGTGTAAATATTATAGTTTTTGCATCGATTAAGTTTTTAATGACAATGGTAACTACTACAAAGAGATGGGCTAGCAATAATAGTCTAAGTAGTCATGTCTTTTGGTACTTTCTTCTCATCATACAAAAATAAATGGTGTACTACTACCATTATATCAACCGCAATTGGGTTTCTTCCCTATAAAAGGGAAAAAAGCGTATTAATACACACCCAACTCCCAACTAGCTAAACAACATTCATGACATTAGATGTATACATCCACCAAACACTTACCTGAAAACTGAATGAATGAGAGTGAGAGTTTATATGCATGTCCCTCTGAAAGAGAA

Coding sequence (CDS)

ATGGTATCATTTCAAGCACCTTTCCTCCGACTAAACGATCAACGAAACCCGATTTCCGAAACTACTAATAATGATAATAATGATATCAATAATTCCAAGAATATGAAAAGGAAGTGGGATGATGCAGAAGATGAGGCAGAGGAAGAGGTCATCCTTCCTTATAAACATTGGAGGAATCCCAAGGCGGCAACTGCTGTTGCCGCTTTCGCTACCAAATCTTTTTCAGATATCGAGCTTCACCTCGAGACTCCGTTGCCATCCGAATGGCAACGGTGCCTCGATATGCAGTCAGGAGAAATACACTTCTACAACACAAGAACACAAAAAAGAACACAAAGAGATCCAAGAGAAAGAAGCACAGACCCACCAAGTCCTAGGGAATGTCACATGAGTTTAGACCTTGAGCTAAACCTGCCTTGTGGCTCACTCAACCACAATAATAATAATATCTCAAAATCAAAATCAACATCAGAAAAGAAGAGTCTTACAATGATGATCAAGAACAAGAAACCGAGCTACTCACCACCGCCTCCTCCGGTTACTCCTAATCTCTTCAGGAGTCTGAGCACCGCCGGAAACAACACCACCATCGACCTCGAAGCGGCGGACGAGGAAGCCGAGATGGTGGCTACCGCCTGCAATCGGTGCCATATGCTGGTGATGCTCTGCAAAACTTCACCAACATGCCCCAACTGCAAATATGTGCACCCACCTTGCCAGACCCTTCTTGACCTGTTCAAGCCAAGACTTAGCCTATCTTGTTAG

Protein sequence

MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNPKAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERSTDPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPVTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQTLLDLFKPRLSLSC

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo23864.1	Spo23864.1	mRNA

Homology

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BLAST of Spo23864.1 vs. NCBI nr
Match: gi|902231148|gb|KNA22139.1| (hypothetical protein SOVF_036650 [Spinacia oleracea])

HSP 1 Score: 511.5 bits (1316), Expect = 8.300e-142
Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP
Sbjct: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST
Sbjct: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNH-NNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP 180
           DPPSPRECHMSLDLELNLPCGSLNH NNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP
Sbjct: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP 180

Query: 181 VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC 240
           VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC
Sbjct: 181 VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC 240

Query: 241 QTLLDLFKPRLSLSC 255
           QTLLDLFKPRLSLSC
Sbjct: 241 QTLLDLFKPRLSLSC 255

[Close]

BLAST of Spo23864.1 vs. NCBI nr
Match: gi|731312825|ref|XP_010676609.1| (PREDICTED: uncharacterized protein LOC104892385 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 353.6 bits (906), Expect = 2.900e-94
Identity = 187/254 (73.62%), Postives = 205/254 (80.71%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQ  FL+LNDQR PISET    ++D  N KNMKRKW+D +DE   EVILPYKHW+NP
Sbjct: 1   MVSFQTSFLQLNDQRKPISET----DHDHTNFKNMKRKWNDTQDE---EVILPYKHWKNP 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KA      FATK+FSDIELHLETPLPSEWQRCLD+QSGEIHFYNTRTQKRT RDPRE S+
Sbjct: 61  KAT-----FATKTFSDIELHLETPLPSEWQRCLDIQSGEIHFYNTRTQKRTLRDPRE-SS 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPV 180
           +P SPR+ HMSLDLELNLPCGSLNHNN     SKSTSEK   TM    KK S + PPPP 
Sbjct: 121 EPSSPRDYHMSLDLELNLPCGSLNHNNY----SKSTSEKNMTTM----KKKSSNSPPPPA 180

Query: 181 TPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQ 240
           + +L R+LST G   TID+EA DE AEMVATAC RCHMLVMLCK+SPTCPNCKYVHPPCQ
Sbjct: 181 STDLLRNLSTVGKTNTIDIEATDEAAEMVATACKRCHMLVMLCKSSPTCPNCKYVHPPCQ 233

Query: 241 TLLDLFKPRLSLSC 255
           +LLDLFKPRLSLSC
Sbjct: 241 SLLDLFKPRLSLSC 233

[Close]

BLAST of Spo23864.1 vs. NCBI nr
Match: gi|470132092|ref|XP_004301920.1| (PREDICTED: uncharacterized protein LOC101299013 [Fragaria vesca subsp. vesca])

HSP 1 Score: 175.6 bits (444), Expect = 1.100e-40
Identity = 110/248 (44.35%), Postives = 134/248 (54.03%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQA  L  N +R+   ++ N+           KRKWDD     E +           
Sbjct: 1   MVSFQAQPLSPNQKRSITDDSENSCK---------KRKWDDPFPFLELD----------K 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           ++  A      KSF D+ELHLETPLP EWQRCLD+QSG+IHFYNTRTQ +T RDPR  +T
Sbjct: 61  RSKPAADQIRPKSFFDVELHLETPLPLEWQRCLDIQSGQIHFYNTRTQMKTSRDPRRSTT 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPV 180
             P     HMSLDLELNL C S  H+                               P +
Sbjct: 121 PEPPSTNHHMSLDLELNLRCDSQPHH-------------------------------PEI 180

Query: 181 TPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQ 240
           +PN FR+L    N++ + LE  D + EMVAT C RCHMLVMLCK+SP CPNCKY+H P Q
Sbjct: 181 SPNSFRAL-FKNNSSRLGLE-LDHDQEMVATVCMRCHMLVMLCKSSPACPNCKYMHTPDQ 196

Query: 241 TLLDLFKP 249
           +    FKP
Sbjct: 241 SPSTPFKP 196

[Close]

BLAST of Spo23864.1 vs. NCBI nr
Match: gi|590598055|ref|XP_007018786.1| (E3 ubiquitin-protein ligase HUWE1, putative [Theobroma cacao])

HSP 1 Score: 171.8 bits (434), Expect = 1.600e-39
Identity = 124/260 (47.69%), Postives = 151/260 (58.08%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVS QAP        +P    T  D  + N+SK  KRK D  E + +EE        +  
Sbjct: 1   MVSIQAPL-------SPDMRKTTPDQLE-NSSK--KRKLD--EPQGDEETFE-----KRS 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KAA+      TKS  D+ELHLETPLP EWQRCLD+QSG+IHFYNTRT  RT +DPR RS 
Sbjct: 61  KAAS------TKSVFDMELHLETPLPLEWQRCLDIQSGQIHFYNTRTHTRTCKDPR-RSP 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPV 180
           +PPSPR  HMSLDLELNLPC S       + K+ +T   +       +K  S SP    V
Sbjct: 121 EPPSPR--HMSLDLELNLPCDS-------VRKTNATDHHQF------DKHNSVSPRSDSV 180

Query: 181 TPNLFRSLSTAGNNTTIDL------EAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKY 240
                + +++ G  TT  L      E   ++ EMVAT C RCHMLVMLCK++P CPNCK+
Sbjct: 181 D----KKINSTGGLTTQSLSWLAVEEDDQKQQEMVATVCMRCHMLVMLCKSAPACPNCKF 217

Query: 241 VHPPCQTLLDLFKPRLSLSC 255
           +HPP Q    LFK RLSL C
Sbjct: 241 MHPPDQGPPKLFKQRLSLLC 217

[Close]

BLAST of Spo23864.1 vs. NCBI nr
Match: gi|225459312|ref|XP_002284166.1| (PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera])

HSP 1 Score: 171.4 bits (433), Expect = 2.000e-39
Identity = 121/256 (47.27%), Postives = 143/256 (55.86%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQ P L  +  R  +SE  N          + KRKW+  +   EE   L  K     
Sbjct: 1   MVSFQTP-LSPDPTRPIVSEFEN---------LSKKRKWE--KTGTEEVFKLQSK----- 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
                  A +TKS  DIEL LETPLP EWQRCLD+QSG+IHFYNTRT KRT RDPR  S 
Sbjct: 61  -------AKSTKSIFDIELQLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPR-ASP 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHN--NNNISKSKSTSEKKSLTMMIKNKKPSYSPPPP 180
           +PPSP    MSL+LELNLPC SL  N  ++N+ K  S S   +    ++ K P      P
Sbjct: 121 EPPSPGP--MSLELELNLPCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSP 180

Query: 181 PVTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPP 240
                    L+  G+N            EMVA  C RCHMLVMLCK+SPTCPNCK++HPP
Sbjct: 181 -------SWLAFEGDN-----------QEMVAAVCKRCHMLVMLCKSSPTCPNCKFMHPP 211

Query: 241 CQTLLDLFKPRLSLSC 255
            QT  +LFK R SL C
Sbjct: 241 DQTPPNLFKRRFSLLC 211

[Close]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036650 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 5.800e-142
Identity = 254/255 (99.61%), Postives = 254/255 (99.61%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP
Sbjct: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST
Sbjct: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNH-NNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP 180
           DPPSPRECHMSLDLELNLPCGSLNH NNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP
Sbjct: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPP 180

Query: 181 VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC 240
           VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC
Sbjct: 181 VTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPC 240

Query: 241 QTLLDLFKPRLSLSC 255
           QTLLDLFKPRLSLSC
Sbjct: 241 QTLLDLFKPRLSLSC 255

[Close]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FW36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009190 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.000e-94
Identity = 187/254 (73.62%), Postives = 205/254 (80.71%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQ  FL+LNDQR PISET    ++D  N KNMKRKW+D +DE   EVILPYKHW+NP
Sbjct: 1   MVSFQTSFLQLNDQRKPISET----DHDHTNFKNMKRKWNDTQDE---EVILPYKHWKNP 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KA      FATK+FSDIELHLETPLPSEWQRCLD+QSGEIHFYNTRTQKRT RDPRE S+
Sbjct: 61  KAT-----FATKTFSDIELHLETPLPSEWQRCLDIQSGEIHFYNTRTQKRTLRDPRE-SS 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPV 180
           +P SPR+ HMSLDLELNLPCGSLNHNN     SKSTSEK   TM    KK S + PPPP 
Sbjct: 121 EPSSPRDYHMSLDLELNLPCGSLNHNNY----SKSTSEKNMTTM----KKKSSNSPPPPA 180

Query: 181 TPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQ 240
           + +L R+LST G   TID+EA DE AEMVATAC RCHMLVMLCK+SPTCPNCKYVHPPCQ
Sbjct: 181 STDLLRNLSTVGKTNTIDIEATDEAAEMVATACKRCHMLVMLCKSSPTCPNCKYVHPPCQ 233

Query: 241 TLLDLFKPRLSLSC 255
           +LLDLFKPRLSLSC
Sbjct: 241 SLLDLFKPRLSLSC 233

[Close]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Match: A0A061FG18_THECC (E3 ubiquitin-protein ligase HUWE1, putative OS=Theobroma cacao GN=TCM_034911 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.100e-39
Identity = 124/260 (47.69%), Postives = 151/260 (58.08%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVS QAP        +P    T  D  + N+SK  KRK D  E + +EE        +  
Sbjct: 1   MVSIQAPL-------SPDMRKTTPDQLE-NSSK--KRKLD--EPQGDEETFE-----KRS 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
           KAA+      TKS  D+ELHLETPLP EWQRCLD+QSG+IHFYNTRT  RT +DPR RS 
Sbjct: 61  KAAS------TKSVFDMELHLETPLPLEWQRCLDIQSGQIHFYNTRTHTRTCKDPR-RSP 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPV 180
           +PPSPR  HMSLDLELNLPC S       + K+ +T   +       +K  S SP    V
Sbjct: 121 EPPSPR--HMSLDLELNLPCDS-------VRKTNATDHHQF------DKHNSVSPRSDSV 180

Query: 181 TPNLFRSLSTAGNNTTIDL------EAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKY 240
                + +++ G  TT  L      E   ++ EMVAT C RCHMLVMLCK++P CPNCK+
Sbjct: 181 D----KKINSTGGLTTQSLSWLAVEEDDQKQQEMVATVCMRCHMLVMLCKSAPACPNCKF 217

Query: 241 VHPPCQTLLDLFKPRLSLSC 255
           +HPP Q    LFK RLSL C
Sbjct: 241 MHPPDQGPPKLFKQRLSLLC 217

[Close]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Match: E0CRK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g05580 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.400e-39
Identity = 121/256 (47.27%), Postives = 143/256 (55.86%), Query Frame = 1


		  
Query: 1   MVSFQAPFLRLNDQRNPISETTNNDNNDINNSKNMKRKWDDAEDEAEEEVILPYKHWRNP 60
           MVSFQ P L  +  R  +SE  N          + KRKW+  +   EE   L  K     
Sbjct: 1   MVSFQTP-LSPDPTRPIVSEFEN---------LSKKRKWE--KTGTEEVFKLQSK----- 60

Query: 61  KAATAVAAFATKSFSDIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERST 120
                  A +TKS  DIEL LETPLP EWQRCLD+QSG+IHFYNTRT KRT RDPR  S 
Sbjct: 61  -------AKSTKSIFDIELQLETPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPR-ASP 120

Query: 121 DPPSPRECHMSLDLELNLPCGSLNHN--NNNISKSKSTSEKKSLTMMIKNKKPSYSPPPP 180
           +PPSP    MSL+LELNLPC SL  N  ++N+ K  S S   +    ++ K P      P
Sbjct: 121 EPPSPGP--MSLELELNLPCDSLRRNRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSP 180

Query: 181 PVTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPP 240
                    L+  G+N            EMVA  C RCHMLVMLCK+SPTCPNCK++HPP
Sbjct: 181 -------SWLAFEGDN-----------QEMVAAVCKRCHMLVMLCKSSPTCPNCKFMHPP 211

Query: 241 CQTLLDLFKPRLSLSC 255
            QT  +LFK R SL C
Sbjct: 241 DQTPPNLFKRRFSLLC 211

[Close]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Match: V4T724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002416mg PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 5.900e-38
Identity = 106/228 (46.49%), Postives = 136/228 (59.65%), Query Frame = 1


		  
Query: 31  NSKNMKRKWDDAEDEAEEEVILPYKHWRNPKAATAVAAFATKSFSDIELHLETPLPSEWQ 90
           N+    +++D+   + + E I+P +   + +++  V      S  DIEL LETPLP EW+
Sbjct: 11  NNGKANKEFDNLSKKRKLEEIIPGEGTFDKRSSKGVTT--KSSIFDIELQLETPLPLEWE 70

Query: 91  RCLDMQSGEIHFYNTRTQKRTQRDPRERSTDPPSPRECHMSLDLELNLPCGSLNHN---N 150
           RCLD+QSGEIHFYNTRT K+T  DPR  S +PP+    HMSLDLELNLPC S   N   N
Sbjct: 71  RCLDIQSGEIHFYNTRTHKKTSGDPR-GSPEPPNRAGDHMSLDLELNLPCDSQRKNQGSN 130

Query: 151 NNISKSKSTS-EKKSLTMMIKNKKPSYSPPPPPVTPNLFRSLSTAGNNTTIDLEAADEEA 210
           N ISK  S S  +  L   +K K   +    P         L+  G++        D++ 
Sbjct: 131 NIISKPNSASPPRHHLGDHLKKKSGDHLSRCP-------SWLAFEGDH--------DDQQ 190

Query: 211 EMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQTLLDLFKPRLSLSC 255
           EMVATAC RCHMLVMLCK+SPTCPNCK++HPP Q+   LFK   SL C
Sbjct: 191 EMVATACMRCHMLVMLCKSSPTCPNCKFLHPPDQSPPKLFKQTFSLLC 220

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BLAST of Spo23864.1 vs. TAIR (Arabidopsis)
Match: AT1G78170.1 (unknown protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.900e-17
Identity = 65/174 (37.36%), Postives = 83/174 (47.70%), Query Frame = 1


		  
Query: 76  DIELHLETPLPSEWQRCLDMQSGEIHFYNTRTQKRTQRDPRERSTDPPSPRECHMSLDLE 135
           D ELHL TPLPS+WQ              T+   RT  + R    DP    +  MSLDLE
Sbjct: 56  DFELHLHTPLPSDWQ--------------TKGYSRTSDEHRAYPKDPVIFGQPKMSLDLE 115

Query: 136 LNL-PCGSLNHNNNNISKSKSTSEKKSLTMMIKNKKPSYSPPPPPVTPNLFRSLSTAGNN 195
           LNL P GS +       K +S+S         K K  + +     +   L RS S     
Sbjct: 116 LNLSPSGSPSRTTTK--KYESSSIHNETVSSSKIKVLTNTSKKSIIGTGLSRSPSWLAFE 175

Query: 196 TTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPPCQTLLDLFKP 249
              D +   +  EMV T C +CHMLVMLC ++P CPNCK++HP   +   LFKP
Sbjct: 176 GGDDNDVDHKGQEMVTTVCMKCHMLVMLCTSTPVCPNCKFMHPHDHSSTKLFKP 213

[Close]

BLAST of Spo23864.1 vs. TAIR (Arabidopsis)
Match: AT4G08910.1 (unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.900e-12
Identity = 58/136 (42.65%), Postives = 69/136 (50.74%), Query Frame = 1


		  
Query: 129 HMSLDLELNLPCG--SLNHNNN--NISKSKSTSEKKSLTMMIKNK------KPSYSPPPP 188
           HMSLDLELNL      LNH+++  N +K     E+K   MM K        K S S    
Sbjct: 86  HMSLDLELNLSPSLIDLNHHHDLSNYNKGYEEDERKK-KMMEKGSVLGLETKKSMSR--- 145

Query: 189 PVTPNLFRSLSTAGNNTTIDLEAADEEAEMVATACNRCHMLVMLCKTSPTCPNCKYVHPP 248
            V  +L       G+           E EMVA  C +CHMLVMLCK SP CPNCK++H P
Sbjct: 146 -VAFDLDDDCCDRGDGV-----GGRSEEEMVARVCMKCHMLVMLCKASPACPNCKFMHSP 205

Query: 249 CQTLLD-LFKPRLSLS 254
             T L  LF P+ SLS
Sbjct: 206 EDTSLSLLFTPKPSLS 211

The following BLAST results are available for this feature:

BLAST of Spo23864.1 vs. NCBI nr
BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
BLAST of Spo23864.1 vs. ExPASy Swiss-Prot
BLAST of Spo23864.1 vs. TAIR (Arabidopsis)

BLAST of Spo23864.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902231148\|gb\|KNA22139.1\|	8.3e-142	99.6	hypothetical protein SOVF_0366...	[more]
gi\|731312825\|ref\|XP_010676609.1\|	2.9e-94	73.6	PREDICTED: uncharacterized pro...	[more]
gi\|470132092\|ref\|XP_004301920.1\|	1.1e-40	44.3	PREDICTED: uncharacterized pro...	[more]
gi\|590598055\|ref\|XP_007018786.1\|	1.6e-39	47.6	E3 ubiquitin-protein ligase HU...	[more]
gi\|225459312\|ref\|XP_002284166.1\|	2.0e-39	47.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo23864.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RTB0_SPIOL	5.8e-142	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8FW36_BETVU	2.0e-94	73.6	Uncharacterized protein OS=Bet...	[more]
A0A061FG18_THECC	1.1e-39	47.6	E3 ubiquitin-protein ligase HU...	[more]
E0CRK2_VITVI	1.4e-39	47.2	Putative uncharacterized prote...	[more]
V4T724_9ROSI	5.9e-38	46.4	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo23864.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo23864.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G78170.1	3.9e-17	37.3	unknown protein	[more]
AT4G08910.1	2.9e-12	42.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001202	WW domain	PROFILE	PS50020	WW_DOMAIN_2	coord: 83..117 score: 9
IPR001202	WW domain	unknown	SSF51045	WW domain	coord: 83..117 score: 3.2
None	No IPR available	unknown	Coil	Coil	coord: 29..49 scor
None	No IPR available	GENE3D	2.20.70.10		coord: 82..120 score: 4.
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 77..238 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
biological_process	GO:0016036	cellular response to phosphate starvation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0046520	sphingoid biosynthetic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
biological_process	GO:0030091	protein repair
biological_process	GO:0019375	galactolipid biosynthetic process
biological_process	GO:0009631	cold acclimation
biological_process	GO:0042631	cellular response to water deprivation
biological_process	GO:0009790	embryo development
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0070191	methionine-R-sulfoxide reductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0045703	ketoreductase activity
molecular_function	GO:0018454	acetoacetyl-CoA reductase activity
molecular_function	GO:0033743	peptide-methionine (R)-S-oxide reductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo05942	0.67	Barchart \| Table
Spo03066	0.66	Barchart \| Table